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Domain combinations for 143100,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

143100 - TTHA1013/TTHA0281-like

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Volvox_carteri_v199 1
Chlamydomonas_reinhardtii_4.0 3
Synechococcus_sp._PCC_6312 1
Halothece_sp._PCC_7418 1
Rivularia_sp._PCC_7116 2
Nostoc_sp._PCC_7524 1
Anabaena_sp._90 1
Eggerthella_sp._YY7918 2
Eggerthella_lenta_DSM_2243 3
Catenulispora_acidiphila_DSM_44928 1
Stackebrandtia_nassauensis_DSM_44728 1
Rhodococcus_jostii_RHA1 1
Rhodococcus_opacus_B4 2
Corynebacterium_variabile_DSM_44702 1
Gardnerella_vaginalis_409-05 1
Roseiflexus_sp._RS-1 1
Finegoldia_magna_ATCC_29328 3
Veillonella_parvula_DSM_2008 2
Acidaminococcus_fermentans_DSM_20731 1
Selenomonas_sputigena_ATCC_35185 2
Selenomonas_ruminantium_subsp._lactilytica_TAM6421 1
Faecalibacterium_prausnitzii 1
Thermincola_potens_JR 1
Pelotomaculum_thermopropionicum_SI 2
Desulfosporosinus_orientis_DSM_765 4
Dehalobacter_sp._DCA 1
Dehalobacter_sp._CF 1
Syntrophobotulus_glycolicus_DSM_8271 4
Desulfitobacterium_hafniense_Y51 4
Desulfitobacterium_dehalogenans_ATCC_51507 1
Desulfotomaculum_reducens_MI-1 1
Desulfotomaculum_kuznetsovii_DSM_6115 1
Desulfotomaculum_ruminis_DSM_2154 1
Acetobacterium_woodii_DSM_1030 1
Eubacterium_limosum_KIST612 3
[Ruminococcus]_torques 1
Eubacterium_rectale_M104/1 2
Eubacterium_rectale_ATCC_33656 2
Syntrophothermus_lipocalidus_DSM_12680 1
Syntrophomonas_wolfei_subsp._wolfei_str._Goettingen 2
Candidatus_Arthromitus_sp._SFB-mouse-Japan 1
Clostridium_ljungdahlii_DSM_13528 1
Clostridium_kluyveri_DSM_555 4
Clostridium_tetani_E88 1
Thermosediminibacter_oceani_DSM_16646 1
Caldicellulosiruptor_obsidiansis_OB47 1
Caldicellulosiruptor_kronotskyensis_2002 1
Caldicellulosiruptor_hydrothermalis_108 1
Caldicellulosiruptor_kristjanssonii_177R1B 1
Caldicellulosiruptor_saccharolyticus_DSM_8903 3
Caldicellulosiruptor_bescii_DSM_6725 1
Thermoanaerobacterium_xylanolyticum_LX-11 1
Thermoanaerobacterium_thermosaccharolyticum_DSM_571 1
Tepidanaerobacter_acetatoxydans_Re1 1
Carboxydothermus_hydrogenoformans_Z-2901 2
Thermoanaerobacter_mathranii_subsp._mathranii_str._A3 1
Thermoanaerobacter_italicus_Ab9 1
Thermoanaerobacter_wiegelii_Rt8.B1 1
Tetragenococcus_halophilus_NBRC_12172 2
Enterococcus_faecalis_62 1
Weissella_koreensis_KACC_15510 1
Lactobacillus_casei_ATCC_334 1
Lactobacillus_crispatus_ST1 1
Lactobacillus_rhamnosus_Lc_705 1
Lactobacillus_helveticus_DPC_4571 1
Lactobacillus_buchneri_NRRL_B-30929 2
Lactobacillus_buchneri 1
Lactobacillus_brevis_ATCC_367 1
Streptococcus_gallolyticus_UCN34 1
Streptococcus_pseudopneumoniae_IS7493 2
Streptococcus_equi_subsp._equi_4047 1
Streptococcus_uberis_0140J 1
Streptococcus_pyogenes_str._Manfredo 1
Streptococcus_pneumoniae_P1031 1
Streptococcus_mutans_NN2025 1
Kyrpidia_tusciae_DSM_2912 6
Paenibacillus_polymyxa_M1 1
Bacillus_weihenstephanensis_KBAB4 1
Bacillus_anthracis_str._A0248 1
Staphylococcus_pseudintermedius_HKU10-03 1
Belliella_baltica_DSM_15883 1
Parabacteroides_distasonis_ATCC_8503 1
Bacteroides_sp._CF50 1
Prevotella_melaninogenica_ATCC_25845 1
Bacteroides_salanitronis_DSM_18170 2
Solitalea_canadensis_DSM_3403 1
Zunongwangia_profunda_SM-A87 1
Aequorivita_sublithincola_DSM_14238 1
Capnocytophaga_ochracea_DSM_7271 1
Waddlia_chondrophila_WSU_86-1044 1
Planctomyces_brasiliensis_DSM_5305 1
Turneriella_parva_DSM_21527 1
Brachyspira_pilosicoli_95/1000 1
Treponema_denticola_ATCC_35405 4
Leptotrichia_buccalis_C-1013-b 1
Ilyobacter_polytropus_DSM_2926 1
Fusobacterium_nucleatum_subsp._nucleatum_ATCC_25586 1
Acidithiobacillus_caldus_SM-1 1
Acidithiobacillus_ferrooxidans_ATCC_53993 1
Sulfurospirillum_deleyianum_DSM_6946 1
Arcobacter_butzleri_RM4018 1
Campylobacter_hominis_ATCC_BAA-381 1
Campylobacter_curvus_525.92 1
Campylobacter_concisus_13826 1
Campylobacter_jejuni_subsp._doylei_269.97 1
Desulfarculus_baarsii_DSM_2075 1
Desulfobulbus_propionicus_DSM_2032 1
Desulfomicrobium_baculatum_DSM_4028 1
Desulfovibrio_piezophilus 1
Desulfovibrio_aespoeensis_Aspo-2 2
Desulfovibrio_magneticus_RS-1 2
Desulfovibrio_vulgaris_subsp._vulgaris_DP4 1
Babela_massiliensis 1
Neisseria_gonorrhoeae_NCCP11945 2
Rubrivivax_gelatinosus_IL144 1
Cupriavidus_metallidurans_CH34 1
Burkholderia_thailandensis_E264 1
Burkholderia_cenocepacia_HI2424 1
Polaromonas_naphthalenivorans_CJ2 1
Pusillimonas_sp._T7-7 1
Bordetella_pertussis_Tohama_I 1
Bordetella_parapertussis_12822 1
Achromobacter_xylosoxidans_A8 1
Sideroxydans_lithotrophicus_ES-1 1
Sphingobium_chlorophenolicum_L-1 1
Sphingomonas_wittichii_RW1 1
Maricaulis_maris_MCS10 2
Ruegeria_sp._TM1040 1
Rhodobacter_sphaeroides_ATCC_17029 2
Rhodospirillum_photometricum_DSM_122 1
Rhodospirillum_centenum_SW 1
Rhodospirillum_rubrum_F11 2
Azospirillum_sp._B510 1
Gluconobacter_oxydans_621H 1
Micavibrio_aeruginosavorus_ARL-13 1
Rickettsia_heilongjiangensis_054 1
Rickettsia_rhipicephali_str._3-7-female6-CWPP 1
Methylobacterium_chloromethanicum_CM4 1
Methylobacterium_nodulans_ORS_2060 1
Methylobacterium_radiotolerans_JCM_2831 1
Sinorhizobium_medicae_WSM419 1
Sinorhizobium_meliloti_AK83 1
Agrobacterium_vitis_S4 1
Mesorhizobium_ciceri_biovar_biserrulae_WSM1271 1
Rhodopseudomonas_palustris_BisA53 1
Bartonella_tribocorum_CIP_105476 4
Bartonella_henselae_str._Houston-1 1
Bartonella_grahamii_as4aup 3
Bartonella_bacilliformis_KC583 1
Haemophilus_somnus_129PT 1
Gallibacterium_anatis_UMN179 1
Pasteurella_multocida_subsp._multocida_str._3480 1
Haemophilus_parasuis_SH0165 2
Haemophilus_influenzae_PittEE 2
Shewanella_putrefaciens_CN-32 1
Colwellia_psychrerythraea_34H 1
Alteromonas_sp._SN2 1
Marinomonas_mediterranea_MMB-1 1
Halomonas_elongata_DSM_2581 1
Frateuria_aurantia_DSM_6220 1
Stenotrophomonas_maltophilia_K279a 1
Thioalkalivibrio_sulfidophilus_HL-EbGr7 1
Thiocystis_violascens_DSM_198 1
Nitrosococcus_halophilus_Nc4 1
Photorhabdus_asymbiotica 3
Photorhabdus_luminescens_subsp._laumondii_TTO1 1
Xenorhabdus_nematophila_ATCC_19061 1
Proteus_mirabilis_HI4320 2
Yersinia_pseudotuberculosis_IP_31758 2
Yersinia_pestis_Pestoides_F 2
Yersinia_enterocolitica_subsp._enterocolitica_8081 1
Serratia_sp._AS12 1
Serratia_plymuthica_AS9 1
Dickeya_dadantii_Ech703 1
Pectobacterium_carotovorum_subsp._carotovorum_PC1 1
Pantoea_sp._At-9b 1
Erwinia_billingiae_Eb661 1
Erwinia_pyrifoliae_Ep1/96 1
Erwinia_amylovora_ATCC_49946 2
Escherichia_blattae_DSM_4481 2
Enterobacteriaceae_bacterium_strain_FGI_57 1
Enterobacter_sp._638 1
Enterobacter_asburiae_LF7a 1
Enterobacter_cloacae_subsp._dissolvens_SDM 1
Citrobacter_rodentium_ICC168 1
Pseudomonas_brassicacearum_subsp._brassicacearum_NFM421 1
Pseudomonas_entomophila_L48 2
Pseudomonas_syringae_pv._tomato_str._DC3000 1
Pseudomonas_fluorescens_SBW25 3
Moraxella_catarrhalis_RH4 1
Acinetobacter_baumannii_ATCC_17978 1
Methanosaeta_concilii_GP6 1
Methanosarcina_acetivorans_C2A 1

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Strains
Genome     Number
Chamaesiphon_minutus_PCC_6605 1
Crinalium_epipsammum_PCC_9333 2
Oscillatoria_nigro-viridis_PCC_7112 0
Oscillatoria_acuminata_PCC_6304 1
Arthrospira_platensis_NIES-39 1
Cyanothece_sp._ATCC_51142 3
Stanieria_cyanosphaera_PCC_7437 1
Calothrix_parietina_Calothrix_sp._PCC_6303 1
Cylindrospermum_stagnale_PCC_7417 1
Gordonibacter_pamelaeae_7-10-1-b 2
Adlercreutzia_equolifaciens_DSM_19450 1
Frankia_sp._CcI3 1
Amycolatopsis_orientalis_HCCB10007 1
Mycobacterium_canettii_CIPT_140070010 1
Corynebacterium_pseudotuberculosis_258 1
Corynebacterium_glutamicum_MB001 1
Corynebacterium_glutamicum_ATCC_13032 1
Corynebacterium_glutamicum_ATCC_13032 1
Corynebacterium_glutamicum_ATCC_13032 1
Gardnerella_vaginalis_HMP9231 2
Gardnerella_vaginalis_ATCC_14019 1
Bifidobacterium_animalis_subsp._animalis_ATCC_25527 1
Bifidobacterium_breve_UCC2003 1
Bifidobacterium_bifidum_PRL2010 1
[Eubacterium]_cylindroides_[Eubacterium]_cylindroides_T2-87 1
Faecalibacterium_prausnitzii_L2-6 1
Ruminococcus_champanellensis_18P13 1
Desulfosporosinus_meridiei_DSM_13257 2
Desulfitobacterium_dichloroeliminans_LMG_P-21439 1
Desulfitobacterium_hafniense_DCB-2 4
Desulfotomaculum_gibsoniae_DSM_7213 1
Coprococcus_catus_GD/7 0
Candidatus_Arthromitus_sp._SFB-rat-Yit 1
Candidatus_Arthromitus_sp._SFB-mouse-Yit 1
Clostridium_sp._SY8519 2
Clostridium_kluyveri_NBRC_12016 3
Clostridium_perfringens_str._13 1
Clostridium_botulinum_A2_str._Kyoto 1
Thermoanaerobacterium_saccharolyticum_JW/SL-YS485 1
Thermoanaerobacterium_thermosaccharolyticum_M0795 2
Thermacetogenium_phaeum_DSM_12270 1
Enterococcus_mundtii_QU_25 3
Enterococcus_faecium_Aus0085 1
Lactobacillus_paracasei_subsp._paracasei_8700:2 1
Lactobacillus_casei_LOCK919 1
Lactobacillus_casei_W56 1
Lactobacillus_casei_LC2W 1
Lactobacillus_casei_BD-II 1
Lactobacillus_casei_BL23 1
Lactobacillus_casei_str._Zhang 1
Lactobacillus_rhamnosus_LOCK908 1
Lactobacillus_rhamnosus_LOCK900 1
Lactobacillus_rhamnosus_ATCC_8530 1
Lactobacillus_rhamnosus_GG 1
Lactobacillus_rhamnosus_GG 1
Lactobacillus_reuteri_I5007 1
Lactobacillus_helveticus_R0052 1
Lactobacillus_helveticus_H10 1
Lactobacillus_brevis_KB290 1
Streptococcus_anginosus_C238 1
Streptococcus_gallolyticus_subsp._gallolyticus_ATCC_BAA-2069 2
Streptococcus_gallolyticus_subsp._gallolyticus_ATCC_43143 2
Streptococcus_lutetiensis_033 2
Streptococcus_pyogenes_HSC5 1
Streptococcus_pyogenes_MGAS10750 1
Streptococcus_pyogenes_MGAS10270 1
Streptococcus_pyogenes_MGAS9429 1
Streptococcus_pyogenes_MGAS6180 1
Streptococcus_pyogenes_MGAS8232 1
Streptococcus_pneumoniae_A026 1
Streptococcus_pneumoniae_ST556 1
Streptococcus_pneumoniae_SPNA45 1
Streptococcus_pneumoniae_SPN994039 1
Streptococcus_pneumoniae_SPN994038 1
Streptococcus_pneumoniae_SPN034183 1
Streptococcus_pneumoniae_SPN034156 1
Streptococcus_pneumoniae_INV104 1
Streptococcus_pneumoniae_INV200 1
Streptococcus_pneumoniae_OXC141 1
Streptococcus_pneumoniae_gamPNI0373 1
Streptococcus_pneumoniae_AP200 1
Streptococcus_pneumoniae_ATCC_700669 1
Streptococcus_pneumoniae_TCH8431/19A 1
Streptococcus_pneumoniae_CGSP14 1
Streptococcus_pneumoniae_G54 1
Streptococcus_pneumoniae_JJA 1
Streptococcus_pneumoniae_70585 1
Streptococcus_pneumoniae_Hungary19A-6 1
Streptococcus_pneumoniae_Taiwan19F-14 1
Streptococcus_pneumoniae_D39 1
Streptococcus_pneumoniae_670-6B 1
Streptococcus_pneumoniae_R6 1
Streptococcus_pneumoniae_TIGR4 1
Streptococcus_agalactiae_ILRI005 1
Streptococcus_agalactiae_2603V/R 1
Streptococcus_mutans_GS-5 1
Streptococcus_mutans_LJ23 1
Streptococcus_mutans_UA159 1
Streptococcus_suis_T15 1
Streptococcus_suis_TL13 1
Streptococcus_suis_D12 1
Alicyclobacillus_acidocaldarius_subsp._acidocaldarius_Tc-4-1 1
Paenibacillus_larvae_subsp._larvae_DSM_25430 1
Bacillus_amyloliquefaciens_subsp._plantarum_sequencing 1
Bacillus_amyloliquefaciens_subsp._plantarum_YAU_B9601-Y2 1
Bacillus_amyloliquefaciens_Y2 1
Bacillus_amyloliquefaciens_DSM_7 1
Bacillus_cereus_subsp._cytotoxis_NVH_391-98 1
Bacillus_thuringiensis_HD-771 1
Bacillus_thuringiensis_MC28 1
Bacillus_thuringiensis_serovar_kurstaki_str._HD73 2
Bacillus_cereus_E33L 1
Bacillus_anthracis_str._H9401 1
Bacillus_anthracis_str._CDC_684 1
Bacillus_anthracis_str._'Ames_Ancestor' 1
Bacillus_anthracis_str._Sterne 1
Bacillus_anthracis_str._Ames 1
Riemerella_anatipestifer_RA-CH-1 1
Treponema_pedis_str._T_A4 1
Fusobacterium_nucleatum_subsp._vincentii_3_1_36A2 1
Fusobacterium_nucleatum_subsp._animalis_4_8 2
Acidithiobacillus_ferrooxidans_ATCC_23270 1
Campylobacter_jejuni_Waterborne_C.jejuni_Outbreak 1
Campylobacter_jejuni_subsp._jejuni_ICDCCJ07001 1
Campylobacter_jejuni_subsp._jejuni_M1 1
Campylobacter_jejuni_subsp._jejuni_81116 1
Campylobacter_jejuni_subsp._jejuni_81-176 1
Desulfovibrio_vulgaris_str._'Miyazaki_F' 1
Desulfovibrio_vulgaris_str._Hildenborough 1
Desulfovibrio_gigas_DSM_1382_=_ATCC_19364 4
Desulfovibrio_desulfuricans_ND132 1
Neisseria_gonorrhoeae_TCDC-NG08107 1
Neisseria_gonorrhoeae_FA_1090 1
Burkholderia_sp._YI23 1
Burkholderia_pseudomallei_K96243 1
Burkholderia_ambifaria_MC40-6 1
Burkholderia_cenocepacia_MC0-3 1
Burkholderia_cenocepacia_AU_1054 1
Candidatus_Symbiobacter_mobilis_Comamonadaceae_bacterium_CR 2
Bordetella_pertussis_CS 1
Bordetella_parapertussis_18323 1
Bordetella_parapertussis_Bpp5 1
Bordetella_bronchiseptica_MO149 1
Rhodobacter_sphaeroides_2.4.1 1
Rhodospirillum_rubrum_ATCC_11170 2
Micavibrio_aeruginosavorus_EPB 1
Sinorhizobium_fredii_USDA_257 1
Sinorhizobium_meliloti_2011 1
Sinorhizobium_meliloti_GR4 1
Sinorhizobium_meliloti_Rm41 1
Sinorhizobium_meliloti_SM11 2
Sinorhizobium_meliloti_BL225C 1
Sinorhizobium_meliloti_1021 1
Rhodopseudomonas_palustris_DX-1 1
Rhodopseudomonas_palustris_HaA2 1
Rhodopseudomonas_palustris_BisB5 1
Rhodopseudomonas_palustris_BisB18 1
Bartonella_vinsonii_subsp._berkhoffii_str._Winnie 3
Aggregatibacter_actinomycetemcomitans_ANH9381 1
Aggregatibacter_actinomycetemcomitans_D11S-1 1
Haemophilus_somnus_2336 1
Mannheimia_haemolytica_USMARC_2286 1
Mannheimia_haemolytica_M42548 2
Mannheimia_haemolytica_D174 1
Mannheimia_haemolytica_D171 1
Mannheimia_haemolytica_D153 2
Mannheimia_haemolytica_USDA-ARS-USMARC-183 2
Mannheimia_haemolytica_USDA-ARS-USMARC-185 1
Pasteurella_multocida_subsp._multocida_str._HN06 2
Haemophilus_parasuis_ZJ0906 3
Haemophilus_influenzae_F3047 1
Haemophilus_influenzae_F3031 3
Haemophilus_influenzae_PittGG 1
Haemophilus_influenzae_86-028NP 2
Haemophilus_influenzae_R2866 2
Haemophilus_influenzae_R2846 1
Shewanella_baltica_BA175 1
Shewanella_baltica_OS223 1
Shewanella_baltica_OS195 1
Shewanella_putrefaciens_200 1
Stenotrophomonas_maltophilia_D457 1
Stenotrophomonas_maltophilia_R551-3 1
Legionella_pneumophila_str._Lens 1
Proteus_mirabilis_BB2000 1
Yersinia_pseudotuberculosis_PB1/+ 2
Yersinia_pseudotuberculosis_YPIII 2
Yersinia_pseudotuberculosis_IP_32953 2
Yersinia_pestis_biovar_Microtus_str._91001 2
Yersinia_pestis_A1122 2
Yersinia_pestis_Z176003 2
Yersinia_pestis_D182038 2
Yersinia_pestis_D106004 2
Yersinia_pestis_biovar_Medievalis_str._Harbin_35 2
Yersinia_pestis_Nepal516 2
Yersinia_pestis_Antiqua 2
Yersinia_pestis_Angola 1
Yersinia_pestis_CO92 2
Yersinia_pestis_KIM10+ 2
Yersinia_enterocolitica_subsp._palearctica_105.5R(r) 1
Yersinia_enterocolitica_subsp._palearctica_Y11 1
Serratia_sp._AS13 1
Serratia_plymuthica_S13 1
Serratia_plymuthica_4Rx13 2
Serratia_marcescens_FGI94 1
Serratia_marcescens_WW4 2
Serratia_liquefaciens_ATCC_27592 1
Pectobacterium_carotovorum_subsp._carotovorum_PCC21 1
Erwinia_pyrifoliae_DSM_12163 1
Erwinia_amylovora_CFBP1430 2
Klebsiella_pneumoniae_342 1
Escherichia_coli_UMN026 1
Enterobacter_cloacae_subsp._cloacae_ATCC_13047 1
Pseudomonas_syringae_pv._phaseolicola_1448A 1
Pseudomonas_putida_NBRC_14164 2
Pseudomonas_putida_BIRD-1 1
Pseudomonas_putida_KT2440 1
Pseudomonas_protegens_CHA0 1
Pseudomonas_poae_RE*1-1-14 2
Pseudomonas_fluorescens_F113 1
Pseudomonas_fluorescens_A506 1
Pseudomonas_fluorescens_R124 3
Pseudomonas_fluorescens_Pf0-1 3
Pseudomonas_resinovorans_NBRC_106553 2
Pseudomonas_aeruginosa_MTB-1 1
Pseudomonas_aeruginosa_LES431 1
Pseudomonas_aeruginosa_RP73 1
Pseudomonas_aeruginosa_M18 1
Pseudomonas_aeruginosa_LESB58 1
Pseudomonas_aeruginosa_PA7 2
Acinetobacter_sp.__SH024 1
Acinetobacter_baumannii_BJAB0715 1
Acinetobacter_baumannii_BJAB07104 1
Acinetobacter_baumannii_TCDC-AB0715 3
Acinetobacter_baumannii_D1279779 1
Acinetobacter_baumannii_MDR-TJ 1
Acinetobacter_baumannii_1656-2 2
Acinetobacter_baumannii_SDF 1
Acinetobacter_baumannii_MDR-ZJ06 1
Acinetobacter_baumannii_AB0057 1
Acinetobacter_baumannii_ACICU 2
Acinetobacter_junii__SH205 1

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Others
Genome     Number
NCBI_plasmid_sequences_(Plasmids) 24
Protein_Data_Bank_(all_PDB_sequenc) 2
STRING_v9.0.5_(STRING) 227
Uniprot_2018_03_genome 16224
NCBI_2017_08_genome 25889
TargetDB__(Targets) 1
UniProt__viral_sequences_(Viral) 7
NCBI_viral_sequences_(Viral) 10

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