SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for _gap_,49265,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

49265 - Fibronectin type III

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


Jump to [ Top of page · Domain combinations in groups of genomes ]

Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Homo_sapiens_76_38   (Human)   31
Pan_troglodytes_76_2.1.4   (Chimpanzee)   14
Gorilla_gorilla_76_3.1   (Western gorilla)   16
Pongo_abelii_76_2   (Sumatran orangutan)   13
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   17
Papio_anubis_76   (Olive baboon)   12
Macaca_mulatta_76_1   (Rhesus monkey)   26
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   24
Otolemur_garnettii_76_3   (Small-eared galago)   11
Microcebus_murinus_76_1   (Gray mouse lemur)   12
Rattus_norvegicus_76_5.0   (Norway rat)   13
Mus_musculus_76_38   (House mouse)   20
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   9
Ictidomys_tridecemlineatus_76_2   (Thirteen-lined ground squirrel)   13
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   10
Cavia_porcellus_76_3   (Domestic guinea pig)   10
Oryctolagus_cuniculus_76_2   (Rabbit)   11
Ochotona_princeps_76   (American pika)   10
Tupaia_belangeri_76   (Northern tree shrew)   8
Sus_scrofa_76_10.2   (Pig)   10
Bos_taurus_76_3.1   (Cattle)   11
Ovis_aries_76_3.1   (Sheep)   9
Vicugna_pacos_76_1   (Alpaca)   9
Tursiops_truncatus_76_1   (Bottlenose dolphin)   9
Mustela_putorius_furo_76_1.0   (Domestic ferret)   11
Ailuropoda_melanoleuca_76_1   (Giant panda)   13
Canis_familiaris_76_3.1   (Dog)   13
Felis_catus_76_6.2   (Domestic cat)   11
Equus_caballus_76_2   (Horse)   13
Myotis_lucifugus_76_2.0   (Little brown bat)   7
Pteropus_vampyrus_76_1   (Large flying fox)   13
Sorex_araneus_76_1   (European shrew)   7
Erinaceus_europaeus_76   (Western European hedgehog)   9
Procavia_capensis_76_1   (Cape rock hyrax)   11
Loxodonta_africana_76_3   (African savanna elephant)   20
Echinops_telfairi_76   (Small Madagascar hedgehog)   15
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   10
Choloepus_hoffmanni_76_1   (Hoffmann's two-fingered sloth)   8
Macropus_eugenii_76_1.0   (Tammar wallaby)   8
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   14
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   13
Ornithorhynchus_anatinus_76_5   (Platypus)   12
Saccoglossus_kowalevskii_v3.0 14
Petromyzon_marinus_76_7.0   (Sea lamprey)   8
Meleagris_gallopavo_76_2   (Turkey)   9
Gallus_gallus_76_4   (Chicken)   10
Anas_platyrhynchos_76_1.0   (Mallard)   7
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   11
Ficedula_albicollis_76_1.0   (Collared flycatcher)   10
Pelodiscus_sinensis_76_1.0   (Chinese soft-shelled turtle)   14
Anolis_carolinensis_76_2.0   (Green anole)   10
Xenopus_laevis_   (African clawed frog)   9
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   9
Latimeria_chalumnae_76_1   (Coelacanth)   11
Lepisosteus_oculatus_76   (Spotted gar)   18
Gadus_morhua_76_1   (Atlantic cod)   16
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   16
Takifugu_rubripes_76_4   (Torafugu)   29
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   16
Oryzias_latipes_76_1   (Japanese medaka)   8
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   13
Poecilia_formosa_76   (Amazon molly)   18
Oreochromis_niloticus_76_1.0   (Nile tilapia)   20
Astyanax_mexicanus_76   (Mexican tetra)   29
Danio_rerio_76_9   (Zebrafish)   31
Oikopleura_dioica 3
Ciona_savignyi_76_2.0   (Pacific transparent sea squirt)   6
Ciona_intestinalis_76   (Vase tunicate)   5
Strongylocentrotus_purpuratus_v3.1   (Purple sea urchin)   32
Adineta_vaga 14
Octopus_bimaculoides_280 18
Crassostrea_gigas_22   (Pacific oyster)   19
Lottia_gigantea_   (Owl limpet)   13
Helobdella_robusta_ 14
Capitella_sp._I_ 18
Danaus_plexippus_OGS1.0   (Monarch butterfly)   2
Heliconius_melpomene_   (Postman butterfly)   3
Bombyx_mori_   (Domestic silkworm)   6
Nasonia_vitripennis_   (Jewel wasp)   0
Apis_mellifera_38.2d_(Not_maintained)   (Honey bee)   3
Harpegnathos_saltator_v3.3   (Jerdon's jumping ant)   3
Linepithema_humile_v1.1   (Argentine ant)   5
Pogonomyrmex_barbatus_v1.2   (Red harvester ant)   4
Solenopsis_invicta_v.2.2.3   (Red fire ant)   3
Acromyrmex_echinatior_v3.8   (Panamanian leafcutter ant)   2
Atta_cephalotes_v1.1 2
Camponotus_floridanus_v3.3   (Florida carpenter ant)   5
Lucilia_cuprina   (Australian sheep blowfly)   1
Drosophila_grimshawi_1.3 0
Drosophila_willistoni_1.3 3
Drosophila_pseudoobscura_2.13 1
Drosophila_persimilis_1.3 3
Drosophila_suzukii 2
Drosophila_yakuba_1.3 2
Drosophila_simulans_1.3 4
Drosophila_sechellia_1.3 3
Drosophila_melanogaster_76_5   (Fruit fly)   3
Drosophila_erecta_1.3 2
Drosophila_ananassae_1.3 4
Drosophila_virilis_1.2 3
Drosophila_mojavensis_1.3 1
Megaselia_scalaris_22 2
Aedes_aegypti_55_(Not_maintained)   (Yellow fever mosquito)   0
Culex_pipiens_quinquefasciatus_   (Southern house mosquito)   8
Anopheles_darlingi_22   (American malaria mosquito)   2
Anopheles_gambiae_49_3j   (African malaria mosquito)   1
Tribolium_castaneum_3.0   (Red flour beetle)   4
Pediculus_humanus_corporis__(Early_assembly)   (Human body louse)   2
Acyrthosiphon_pisum_   (Pea aphid)   2
Rhodnius_prolixus_22 3
Daphnia_pulex_   (Common water flea)   2
Strigamia_maritima_22 5
Sarcoptes_scabiei 3
Tetranychus_urticae_   (Two-spotted spider mite)   5
Ixodes_scapularis__(Preliminary)   (Black-legged tick)   9
Pristionchus_pacificus_ 4
Meloidogyne_incognita_   (Southern root-knot nematode)   4
Meloidogyne_hapla_ 5
Onchocerca_volvulus_22 4
Brugia_malayi_WS250   (Agent of lymphatic filariasis)   2
Caenorhabditis_japonica_ 5
Caenorhabditis_brenneri_ 5
Caenorhabditis_remanei_ 2
Caenorhabditis_elegans_76_235   (Roundworm)   3
Caenorhabditis_briggsae_2 2
Trichinella_spiralis_22 4
Hymenolepis_microstoma_ 9
Echinococcus_multilocularis_ 6
Echinococcus_granulosus_ 5
Taenia_solium_   (Pork tapeworm)   25
Schistosoma_mansoni_ 4
Mnemiopsis_leidyi   (Sea walnut)   6
Acropora_digitifera_v1.0 23
Nematostella_vectensis_1.0   (Starlet sea anemone)   8
Hydra_vulgaris 5
Amphimedon_queenslandica 126
Trichoplax_adhaerens_ 10
Proterospongia_sp._ATCC_50818_ 9
Monosiga_brevicollis_ 3
Capsaspora_owczarzaki_ATCC_30864_ 6
Mortierella_verticillata_NRRL_6337_ 1
Coniophora_puteana 0
Daldinia_eschscholzii_EC12_v1.0 1
Apiospora_montagnei_NRRL_25634_v1.0 1
Magnaporthe_poae_ATCC_64411_22 1
Magnaporthe_grisea_70-15_ 1
Podospora_anserina_ 1
Sporotrichum_thermophile_ATCC_42464_ 1
Thielavia_terrestris_NRRL_8126_ 1
Chaetomium_globosum_CBS_148.51_ 1
Neurospora_tetrasperma_ 1
Neurospora_discreta_FGSC_8579_ 1
Neurospora_crassa_OR74A_ 1
Cryphonectria_parasitica_   (Chestnut blight fungus)   1
Verticillium_albo-atrum_VaMs.102_ 1
Verticillium_dahliae_VdLs.17_ 1
Acremonium_alcalophilumv_1.0 1
Glomerella_graminicola_22 1
Fusarium_graminearum_ 1
Nectria_haematococca_mpVI_ 1
Fusarium_oxysporum_f._sp._lycopersici_4286_ 1
Fusarium_verticillioides_7600_ 0
Trichoderma_asperellum_CBS_433.97_v1.0 1
Trichoderma_atroviride_ 1
Trichoderma_citrinoviride_v1.0 1
Trichoderma_reesei_1.2 1
Trichoderma_virens_Gv29-8_ 1
Trichoderma_longibrachiatum_ATCC_18648_v1.0 1
Trichoderma_harzianum_CBS_226.95_v1.0 1
Amorphotheca_resinae_v1.0   (Creosote fungus)   1
Botrytis_cinerea_B05.10_ 1
Blumeria_graminis_22 1
Didymella_exigua_CBS_183.55_v1.0 1
Setosphaeria_turcica_v1.0 1
Cochliobolus_miyabeanus_ATCC_44560_v1.0 1
Cochliobolus_victoriae_FI3_v1.0 1
Cochliobolus_carbonum_26-R-13_v1.0 1
Cochliobolus_heterostrophus_   (Southern corn leaf blight pathogen)   1
Alternaria_brassicicola_ 1
Cochliobolus_lunatus_m118_v2.0 1
Pyrenophora_teres_f._teres_22 1
Pyrenophora_tritici-repentis_ 1
Stagonospora_nodorum_ 1
Mycosphaerella_graminicola_IPO323_ 1
Zasmidium_cellare_ATCC_36951_v1.0 1
Dothistroma_septosporum 1
Septoria_musiva_v1.0 1
Mycosphaerella_fijiensis_CIRAD86_ 1
Aureobasidium_pullulans_var._subglaciale_EXF-2481_v1.0 1
Paracoccidioides_brasiliensis_Pb18_ 1
Coccidioides_posadasii_RMSCC_3488_ 1
Coccidioides_immitis_RS_ 1
Microsporum_canis_CBS_113480_ 1
Trichophyton_equinum_CBS_127.97_ 1
Trichophyton_verrucosum_HKI_0517_ 0
Arthroderma_benhamiae_CBS_112371_ 1
Trichophyton_tonsurans_CBS_112818_ 1
Trichophyton_rubrum_CBS_118892_ 1
Uncinocarpus_reesii_1704_ 1
Aspergillus_zonatus_v1.0 1
Aspergillus_acidus_v1.0 0
Aspergillus_fumigatus_Af293 1
Aspergillus_nidulans_FGSC_A4_ 1
Aspergillus_sydowii_v1.0 1
Aspergillus_versicolor_v1.0 1
Aspergillus_glaucus 1
Aspergillus_carbonarius_ITEM_5010_ 1
Neosartorya_fischeri_NRRL_181_ 2
Aspergillus_terreus_NIH2624_ 1
Aspergillus_tubingensis_v1.0 1
Aspergillus_niger_22 2
Aspergillus_niger_ATCC_1015_ 1
Aspergillus_flavus_NRRL3357_ 1
Aspergillus_clavatus_NRRL_1_ 1
Penicillium_marneffei_ATCC_18224_ 1
Dekkera_bruxellensis_CBS_2499_v2.0 1
Wickerhamomyces_anomalus 1
Pichia_pastoris_GS115_ 1
Yarrowia_lipolytica_CLIB122 1
Candida_glabrata_CBS138 1
Kluyveromyces_thermotolerans_CBS_6340 1
Kluyveromyces_waltii 1
Zygosaccharomyces_rouxii_ 1
Saccharomyces_cerevisiae_76   (Baker's yeast)   1
Catenaria_anguillulae_PL171_v1.0 1
Allomyces_macrogynus_ATCC_38327_ 1
Spizellomyces_punctatus_DAOM_BR117_ 2
Dictyostelium_purpureum_ 1
Selaginella_moellendorffii_ 3
Pinus_taeda   (Loblolly pine)   1
Picea_abies   (Norway spruce)   1
Eucalyptus_grandis_v201   (Rose gum)   3
Theobroma_cacao_B97-61/B2_v1   (Cacao)   3
Gossypium_raimondii_v221 12
Citrus_clementina_v165 5
Citrus_sinensis_v154   (Sweet orange)   6
Thellungiella_halophila_v173 4
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   4
Capsella_rubella_v183 5
Arabidopsis_lyrata_   (Lyrate rockcress)   3
Arabidopsis_thaliana_10   (Thale cress)   7
Carica_papaya_   (Papaya)   1
Medicago_truncatula_   (Barrel medic)   1
Phaseolus_vulgaris_v186   (French bean)   5
Glycine_max_v109   (Soybean)   8
Cucumis_sativus_v122   (Cucumber)   6
Fragaria_vesca_   (Wild strawberry)   2
Malus_domestica_v196   (Apple)   4
Prunus_persica_v139   (Peach)   2
Linum_usitatissimum_v200   (Flax)   5
Manihot_esculenta_v147   (Cassava)   4
Populus_trichocarpa_v156   (Black cottonwood)   5
Vitis_vinifera_   (Wine grape)   3
Mimulus_guttatus_v140   (Spotted monkey flower)   2
Solanum_lycopersicum_v.2.3   (Tomato)   2
Actinidia_chinensis_Hongyang_ 5
Aquilegia_coerulea_v195 5
Triticum_urartu_22 3
Triticum_aestivum_22   (Bread wheat)   10
Aegilops_tauschii_22 3
Brachypodium_distachyon_   (Stiff brome)   4
Oryza_barthii_22   (African wild rice)   3
Oryza_meridionalis_22 4
Oryza_glumaepatula_22 7
Oryza_glaberrima   (African rice)   4
Oryza_punctata_22 4
Oryza_nivara_22 6
Oryza_brachyantha_22   (Malo sina)   3
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   5
Oryza_sativa_v193   (Rice)   5
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   8
Panicum_virgatum_v202   (Switchgrass)   4
Setaria_italica_v164   (Foxtail millet)   1
Zea_mays_subsp._mays_   (Maize)   6
Zea_mays_v181   (Maize)   6
Sorghum_bicolor_   (Sorghum)   3
Musa_balbisiana   (Balbis banana)   4
Musa_acuminata_22   (Wild Malaysian banana)   4
Amborella_trichopoda_22 2
Physcomitrella_patens 1
Coccomyxa_subellipsoidea_sp._C-169_v2 0
Chlorella_variabilis_sp._NC64A_ 4
Chlorella_vulgaris_ 2
Volvox_carteri_f._nagariensis_ 1
Volvox_carteri_v199 2
Chlamydomonas_reinhardtii_4.0 1
Ostreococcus_sp._RCC809_ 1
Ostreococcus_lucimarinus_CCE9901_ 2
Ostreococcus_tauri_ 2
Micromonas_sp._RCC299_ 1
Micromonas_pusilla_CCMP1545_v3.0 0
Thecamonas_trahens_ATCC_50062_ 1
Bigelowiella_natans_CCMP2755_22 4
Cyanophora_paradoxa_ 34
Leishmania_mexicana_2.4 0
Leishmania_major_strain_Friedlin_ 0
Leishmania_infantum_JPCM5_2.4 0
Leishmania_braziliensis_MHOM/BR/75/M2904_2.4 0
Trypanosoma_vivax_ 1
Trypanosoma_cruzi_strain_CL_Brener 1
Trypanosoma_congolense_2.4 0
Trypanosoma_brucei_gambiense_v4.1 1
Trypanosoma_brucei_TREU927_v4.1 1
Ectocarpus_siliculosus 2
Aureococcus_anophagefferens_ 3
Albugo_laibachii_22 3
Pythium_iwayamai_DAOM_BR242034_22 5
Pythium_arrhenomanes_ATCC_12531_22 6
Pythium_ultimum_v1.7-2 1
Pythium_aphanidermatum_DAOM_BR444_22 1
Pythium_irregulare_DAOM_BR486_22 4
Pythium_vexans_DAOM_BR484_22 4
Phytophthora_ramorum_1.1   (Sudden oak death agent)   4
Phytophthora_sojae_1.1 2
Phytophthora_infestans_T30-4_ 2
Phytophthora_capsici_ 3
Hyaloperonospora_arabidopsidis_22 2
Thalassiosira_pseudonana_CCMP1335 1
Perkinsus_marinus_ATCC_50983_ 0
Paramecium_tetraurelia_ 2
Tetrahymena_thermophila_SB210_1_ 1
Cryptosporidium_muris 1
Cryptosporidium_parvum_Iowa_II 1
Symbiodinium_minutum_clade_B1_v1.2 16
Naegleria_gruberi_ 1
Guillardia_theta_CCMP2712_v1.0_ 9
Emiliania_huxleyi_CCMP1516_ 6
Thermobaculum_terrenum_ATCC_BAA-798 2
Leptolyngbya_sp._PCC_7376 0
Nostoc_punctiforme_PCC_73102 1
Mycoplasma_hyorhinis_GDL-1 1
Conexibacter_woesei_DSM_14684 3
Eggerthella_sp._YY7918 0
Eggerthella_lenta_DSM_2243 0
Olsenella_uli_DSM_7084 1
Ilumatobacter_coccineus 2
Nakamurella_multipartita_DSM_44233 0
Modestobacter_marinus 3
Blastococcus_saxobsidens_DD2 1
Geodermatophilus_obscurus_DSM_43160 0
Kineococcus_radiotolerans_SRS30216 1
Catenulispora_acidiphila_DSM_44928 1
Stackebrandtia_nassauensis_DSM_44728 1
Frankia_sp._EAN1pec 2
Frankia_alni_ACN14a 0
Nocardiopsis_dassonvillei_subsp._dassonvillei_DSM_43111 1
Thermomonospora_curvata_DSM_43183 1
Streptosporangium_roseum_DSM_43021 0
Streptomyces_coelicolor_A3(2) 0
Streptomyces_sp._PAMC26508 0
Streptomyces_flavogriseus_ATCC_33331 0
Streptomyces_sp._SirexAA-E 0
Streptomyces_griseus_subsp._griseus_NBRC_13350 0
Streptomyces_bingchenggensis_BCW-1 0
Streptomyces_violaceusniger_Tu_4113 0
Streptomyces_avermitilis_MA-4680 0
Streptomyces_scabiei_87.22 0
Streptomyces_hygroscopicus_subsp._jinggangensis_5008 0
Saccharopolyspora_erythraea_NRRL_2338 1
Amycolatopsis_mediterranei_U32 0
Kribbella_flavida_DSM_17836 1
Propionibacterium_propionicum_F0230a 0
Microlunatus_phosphovorus_NM-1 1
Salinispora_arenicola_CNS-205 0
Salinispora_tropica_CNB-440 0
Verrucosispora_maris_AB-18-032 0
Micromonospora_sp._L5 1
Micromonospora_aurantiaca_ATCC_27029 1
Actinoplanes_sp._N902-109 0
Actinoplanes_sp._SE50/110 1
Actinoplanes_missouriensis_431 3
Gordonia_polyisoprenivorans_VH2 1
Nocardia_farcinica_IFM_10152 1
Sanguibacter_keddieii_DSM_10542 1
Beutenbergia_cavernae_DSM_12333 1
Leifsonia_xyli_subsp._xyli_str._CTCB07 0
Clavibacter_michiganensis_subsp._michiganensis_NCPPB_382 0
Jonesia_denitrificans_DSM_20603 1
Brachybacterium_faecium_DSM_4810 0
Isoptericola_variabilis_225 0
Xylanimonas_cellulosilytica_DSM_15894 0
Cellulomonas_flavigena_DSM_20109 0
[Cellvibrio]_gilvus_ATCC_13127 0
Arthrobacter_phenanthrenivorans_Sphe3 1
Arthrobacter_chlorophenolicus_A6 2
Arthrobacter_aurescens_TC1 1
Arthrobacter_arilaitensis_Re117 0
Arthrobacter_sp._Rue61a 1
Arthrobacter_sp._FB24 1
Micrococcus_luteus_NCTC_2665 0
Bifidobacterium_longum_subsp._longum_JDM301 1
Bifidobacterium_animalis_subsp._lactis_Bl-04 1
Bifidobacterium_dentium_Bd1 1
Bifidobacterium_breve_ACS-071-V-Sch8b 0
Bifidobacterium_bifidum_S17 1
Bifidobacterium_adolescentis_ATCC_15703 1
Actinomyces_sp._F0330 0
Caldilinea_aerophila_DSM_14535_=_NBRC_104270 2
Dehalogenimonas_lykanthroporepellens_BL-DC-9 0
Sphaerobacter_thermophilus_DSM_20745 0
Herpetosiphon_aurantiacus_DSM_785 2
Roseiflexus_castenholzii_DSM_13941 0
Chloroflexus_sp._MS-G 0
Chloroflexus_sp._Y-400-fl 0
Chloroflexus_aurantiacus_J-10-fl 0
Deinococcus_gobiensis_I-0 0
Deinococcus_deserti_VCD115 0
Deinococcus_maricopensis_DSM_21211 0
Deinococcus_radiodurans_R1 0
Natranaerobius_thermophilus_JW/NM-WN-LF 0
Symbiobacterium_thermophilum_IAM_14863 1
Clostridium_clariflavum_DSM_19732 0
Eubacterium_siraeum 0
Clostridium_cellulolyticum_H10 0
Clostridium_thermocellum_ATCC_27405 1
Ruminococcus_sp. 0
Ruminococcus_bromii 1
Ruminococcus_albus_7 6
Thermincola_potens_JR 0
Desulfosporosinus_acidiphilus_SJ4 0
Desulfosporosinus_orientis_DSM_765 1
Dehalobacter_sp._DCA 1
Dehalobacter_sp._CF 1
Syntrophobotulus_glycolicus_DSM_8271 0
Desulfitobacterium_hafniense_Y51 0
Desulfitobacterium_dehalogenans_ATCC_51507 0
Desulfotomaculum_acetoxidans_DSM_771 2
Desulfotomaculum_ruminis_DSM_2154 1
Acetobacterium_woodii_DSM_1030 0
Eubacterium_eligens_ATCC_27750 0
Eubacterium_limosum_KIST612 0
Clostridium_sticklandii_DSM_519 1
Clostridium_saccharolyticum_WM1 0
Clostridium_phytofermentans_ISDg 0
Clostridium_lentocellum_DSM_5427 3
[Ruminococcus]_obeum 1
Eubacterium_rectale_ATCC_33656 0
Coprococcus_sp._ART55/1 1
Roseburia_intestinalis 0
Butyrivibrio_fibrisolvens 1
Syntrophothermus_lipocalidus_DSM_12680 0
Heliobacterium_modesticaldum_Ice1 1
Alkaliphilus_metalliredigens_QYMF 1
Candidatus_Arthromitus_sp._SFB-mouse-Japan 1
Clostridium_sp._BNL1100 2
Clostridium_beijerinckii_NCIMB_8052 0
Clostridium_perfringens_ATCC_13124 0
Clostridium_cellulovorans_743B 1
Clostridium_acetobutylicum_ATCC_824 1
Mahella_australiensis_50-1_BON 0
Caldicellulosiruptor_obsidiansis_OB47 0
Caldicellulosiruptor_kronotskyensis_2002 1
Caldicellulosiruptor_hydrothermalis_108 0
Caldicellulosiruptor_owensensis_OL 1
Caldicellulosiruptor_lactoaceticus_6A 0
Caldicellulosiruptor_saccharolyticus_DSM_8903 0
Caldicellulosiruptor_bescii_DSM_6725 0
Thermoanaerobacterium_thermosaccharolyticum_DSM_571 0
Tepidanaerobacter_acetatoxydans_Re1 0
Halothermothrix_orenii_H_168 1
Enterococcus_hirae_ATCC_9790 0
Lactobacillus_johnsonii_FI9785 1
Exiguobacterium_sp._AT1b 1
Brevibacillus_brevis_NBRC_100599 0
Paenibacillus_sp._JDR-2 0
Paenibacillus_terrae_HPL-003 1
Paenibacillus_mucilaginosus_3016 2
Paenibacillus_polymyxa_M1 2
Bacillus_selenitireducens_MLS10 2
Listeria_welshimeri_serovar_6b_str._SLCC5334 0
Listeria_innocua_Clip11262 0
Listeria_monocytogenes_serotype_4b_str._CLIP_80459 0
Geobacillus_thermoglucosidasius_C56-YS93 1
Lysinibacillus_sphaericus_C3-41 0
Oceanobacillus_iheyensis_HTE831 1
Anoxybacillus_flavithermus_WK1 2
Geobacillus_thermoleovorans_CCB_US3_UF5 1
Geobacillus_kaustophilus_HTA426 0
Geobacillus_sp._GHH01 1
Bacillus_sp._1NLA3E 0
Bacillus_halodurans_C-125 1
Bacillus_weihenstephanensis_KBAB4 1
Bacillus_pseudofirmus_OF4 0
Bacillus_cellulosilyticus_DSM_2522 2
Candidatus_Cloacamonas_acidaminovorans 9
Melioribacter_roseus_P3M 2
Ignavibacterium_album_JCM_16511 9
Chloroherpeton_thalassium_ATCC_35110 1
Haliscomenobacter_hydrossis_DSM_1100 3
Saprospira_grandis_str._Lewin 2
Niastella_koreensis_GR20-10 3
Chitinophaga_pinensis_DSM_2588 2
Salinibacter_ruber_M8 2
Rhodothermus_marinus_DSM_4252 2
Flexibacter_litoralis_DSM_6794 3
Belliella_baltica_DSM_15883 1
Cyclobacterium_marinum_DSM_745 0
Marivirga_tractuosa_DSM_4126 5
Fibrella_aestuarina 2
Leadbetterella_byssophila_DSM_17132 2
Dyadobacter_fermentans_DSM_18053 2
Cytophaga_hutchinsonii_ATCC_33406 4
Spirosoma_linguale_DSM_74 0
Runella_slithyformis_DSM_19594 1
Parabacteroides_distasonis_ATCC_8503 0
Tannerella_forsythia_ATCC_43037 0
Paludibacter_propionicigenes_WB4 0
Odoribacter_splanchnicus_DSM_20712 1
Bacteroides_sp._CF50 1
Prevotella_melaninogenica_ATCC_25845 1
Prevotella_intermedia_17 4
Prevotella_denticola_F0289 1
Porphyromonas_asaccharolytica_DSM_20707 2
Porphyromonas_gingivalis_ATCC_33277 1
Alistipes_finegoldii_DSM_17242 0
Bacteroides_helcogenes_P_36-108 1
Bacteroides_vulgatus_ATCC_8482 1
Bacteroides_fragilis_YCH46 2
Pedobacter_saltans_DSM_12145 0
Solitalea_canadensis_DSM_3403 0
Pedobacter_heparinus_DSM_2366 1
Fluviicola_taffensis_DSM_16823 4
Owenweeksia_hongkongensis_DSM_17368 1
Krokinobacter_sp._4H-3-7-5 1
Gramella_forsetii_KT0803 0
Lacinutrix_sp._5H-3-7-4 4
Robiginitalea_biformata_HTCC2501 4
Croceibacter_atlanticus_HTCC2559 1
Aequorivita_sublithincola_DSM_14238 1
Zobellia_galactanivorans 2
Muricauda_ruestringensis_DSM_13258 2
Cellulophaga_algicola_DSM_14237 1
Cellulophaga_lytica_DSM_7489 4
Flavobacteriaceae_bacterium_3519-10 3
Polaribacter_sp._MED152 1
Riemerella_anatipestifer_ATCC_11845_=_DSM_15868 1
Ornithobacterium_rhinotracheale_DSM_15997 2
Capnocytophaga_canimorsus_Cc5 3
Flavobacterium_indicum_GPTSA100-9 1
Flavobacterium_psychrophilum_JIP02/86 1
Flavobacterium_branchiophilum_FL-15 1
Flavobacterium_columnare_ATCC_49512 3
Flavobacterium_johnsoniae_UW101 1
Fibrobacter_succinogenes_subsp._succinogenes_S85 0
Isosphaera_pallida_ATCC_43644 0
Opitutus_terrae_PB90-1 1
Turneriella_parva_DSM_21527 2
Leptospira_borgpetersenii_serovar_Hardjo-bovis_str._L550 1
Leptospira_interrogans_serovar_Lai_str._IPAV 1
Leptospira_biflexa_serovar_Patoc_strain_'Patoc_1_(Paris)' 1
Brachyspira_murdochii_DSM_12563 0
Spirochaeta_smaragdinae_DSM_11293 1
Spirochaeta_caldaria_DSM_7334 0
Treponema_azotonutricium_ZAS-9 1
Treponema_primitia_ZAS-2 1
Treponema_brennaborense_DSM_12168 1
Spirochaeta_africana_DSM_8902 1
Spirochaeta_thermophila_DSM_6192 0
Thermodesulfatator_indicus_DSM_15286 1
Thermodesulfobacterium_sp._OPB45 1
Calditerrivibrio_nitroreducens_DSM_19672 0
Marinitoga_piezophila_KA3 1
Petrotoga_mobilis_SJ95 1
Mesotoga_prima_MesG1.Ag.4.2 2
Kosmotoga_olearia_TBF_19.5.1 0
Fervidobacterium_pennivorans_DSM_9078 1
Fervidobacterium_nodosum_Rt17-B1 0
Thermosipho_melanesiensis_BI429 1
Thermotoga_lettingae_TMO 0
Thermotoga_thermarum_DSM_5069 0
Caldisericum_exile_AZM16c01 0
Candidatus_Chloracidobacterium_thermophilum_B 1
Candidatus_Solibacter_usitatus_Ellin6076 3
Granulicella_mallensis_MP5ACTX8 1
Candidatus_Koribacter_versatilis_Ellin345 2
Terriglobus_saanensis_SP1PR4 0
Terriglobus_roseus_DSM_18391 0
Acidobacterium_capsulatum_ATCC_51196 0
Thermodesulfovibrio_yellowstonii_DSM_11347 1
Candidatus_Methylomirabilis_oxyfera 0
candidate_division_SR1_bacterium_RAAC1_SR1_1 1
Bdellovibrio_bacteriovorus_HD100 2
Nautilia_profundicola_AmH 0
Nitratifractor_salsuginis_DSM_16511 1
Campylobacter_hominis_ATCC_BAA-381 0
Campylobacter_lari_RM2100 0
Campylobacter_jejuni_subsp._doylei_269.97 0
Campylobacter_sp._03-427 0
Campylobacter_fetus_subsp._fetus_82-40 0
Sulfuricurvum_kujiense_DSM_16994 0
Sulfurimonas_autotrophica_DSM_16294 0
Sulfurimonas_denitrificans_DSM_1251 0
Helicobacter_cetorum_MIT_00-7128 0
Helicobacter_bizzozeronii_CIII-1 0
Helicobacter_felis_ATCC_49179 0
Nitratiruptor_sp._SB155-2 0
Desulfarculus_baarsii_DSM_2075 1
Desulfobacca_acetoxidans_DSM_11109 1
Syntrophus_aciditrophicus_SB 0
Syntrophobacter_fumaroxidans_MPOB 1
Desulfurivibrio_alkaliphilus_AHT2 2
Desulfotalea_psychrophila_LSv54 2
Desulfatibacillum_alkenivorans_AK-01 3
Desulfovibrio_alaskensis_G20 1
Hippea_maritima_DSM_10411 0
Geobacter_daltonii_FRC-32 1
Geobacter_sp._M21 5
Geobacter_uraniireducens_Rf4 3
Geobacter_lovleyi_SZ 0
Geobacter_bemidjiensis_Bem 5
Geobacter_sulfurreducens_KN400 1
Geobacter_metallireducens_GS-15 2
Pelobacter_propionicus_DSM_2379 1
Pelobacter_carbinolicus_DSM_2380 1
Haliangium_ochraceum_DSM_14365 2
Anaeromyxobacter_dehalogenans_2CP-1 2
Stigmatella_aurantiaca_DW4/3-1 3
Corallococcus_coralloides_DSM_2259 5
Myxococcus_xanthus_DK_1622 0
Myxococcus_fulvus_HW-1 1
Neisseria_meningitidis_alpha14 1
Thiomonas_arsenitoxydans 0
Leptothrix_cholodnii_SP-6 0
Ralstonia_solanacearum_CFBP2957 1
Burkholderia_thailandensis_E264 1
Delftia_sp._Cs1-4 1
Delftia_acidovorans_SPH-1 2
Achromobacter_xylosoxidans 2
Sideroxydans_lithotrophicus_ES-1 0
Asticcacaulis_excentricus_CB_48 1
Roseobacter_denitrificans_OCh_114 1
Candidatus_Puniceispirillum_marinum_IMCC1322 1
Methylobacterium_nodulans_ORS_2060 7
Sinorhizobium_medicae_WSM419 1
Sinorhizobium_meliloti_AK83 1
Saccharophagus_degradans_2-40 0
Teredinibacter_turnerae_T7901 0
Cellvibrio_japonicus_Ueda107 2
Actinobacillus_succinogenes_130Z 1
Actinobacillus_pleuropneumoniae_serovar_5b_str._L20 0
Aeromonas_hydrophila_subsp._hydrophila_ATCC_7966 1
Vibrio_vulnificus_MO6-24/O 1
Vibrio_cholerae_O395 1
Shewanella_piezotolerans_WP3 1
Shewanella_halifaxensis_HAW-EB4 1
Shewanella_sediminis_HAW-EB3 0
Shewanella_denitrificans_OS217 0
Shewanella_oneidensis_MR-1 0
Shewanella_baltica_OS185 0
Shewanella_woodyi_ATCC_51908 1
Shewanella_violacea_DSS12 0
Shewanella_putrefaciens_CN-32 0
Pseudoalteromonas_atlantica_T6c 1
Glaciecola_sp._4H-3-7+YE-5 0
Marinobacter_hydrocarbonoclasticus_ATCC_49840 0
Marinobacter_aquaeolei_VT8 0
Alteromonas_sp._SN2 0
Alteromonas_macleodii_str._'Deep_ecotype' 1
Hahella_chejuensis_KCTC_2396 0
Marinomonas_mediterranea_MMB-1 1
Halomonas_elongata_DSM_2581 1
Xanthomonas_axonopodis_pv._citri_str._306 1
Xanthomonas_campestris_pv._campestris_str._B100 1
Nitrosococcus_halophilus_Nc4 1
Legionella_longbeachae_NSW150 1
Photorhabdus_asymbiotica 1
Xenorhabdus_bovienii_SS-2004 1
Xenorhabdus_nematophila_ATCC_19061 1
Providencia_stuartii_MRSN_2154 1
Proteus_mirabilis_HI4320 1
Rahnella_sp._Y9602 2
Yersinia_pseudotuberculosis_IP_31758 0
Yersinia_pestis_Pestoides_F 2
Yersinia_enterocolitica_subsp._enterocolitica_8081 1
Serratia_sp._AS12 0
Serratia_plymuthica_AS9 0
Dickeya_zeae_Ech1591 1
Pantoea_sp._At-9b 2
Escherichia_blattae_DSM_4481 1
Enterobacteriaceae_bacterium_strain_FGI_57 1
Shigella_sonnei_Ss046 2
Shigella_flexneri_5_str._8401 2
Shigella_boydii_CDC_3083-94 2
Escherichia_coli_'BL21-Gold(DE3)pLysS_AG' 1
Enterobacter_sp._R4-368 1
Enterobacter_sp._638 1
Enterobacter_cloacae_subsp._dissolvens_SDM 1
Pseudomonas_sp._TKP 1
Pseudomonas_brassicacearum_subsp._brassicacearum_NFM421 1
Pseudomonas_protegens_Pf-5 1
Pseudomonas_fluorescens_SBW25 1
Pseudomonas_aeruginosa_UCBPP-PA14 1
Pseudomonas_sp._VLB120 2
Psychrobacter_arcticus_273-4 1
Acinetobacter_oleivorans_DR1 1
Acinetobacter_baumannii_ATCC_17978 1
Francisella_cf._novicida_3523 0
Francisella_novicida_U112 0
Cenarchaeum_symbiosum_A 1
Nitrosopumilus_maritimus_SCM1 0
Staphylothermus_hellenicus_DSM_12710 0
Sulfolobus_acidocaldarius_DSM_639 0
Methanocella_arvoryzae_MRE50 0
Methanohalobium_evestigatum_Z-7303 2
Methanococcoides_burtonii_DSM_6242 1
Methanohalophilus_mahii_DSM_5219 0
Methanosphaerula_palustris_E1-9c 0
Methanocorpusculum_labreanum_Z 1
Natrialba_magadii_ATCC_43099 2
Halorubrum_lacusprofundi_ATCC_49239 2
Halogeometricum_borinquense_DSM_11551 0
Aciduliprofundum_sp._MAR08-339 1
Aciduliprofundum_boonei_T469 1

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Strains
Genome     Number
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   22
Drosophila_melanogaster_FlyBase_5.12_(FlyBase)   (Fruit fly)   3
Anopheles_gambiae_VectorBase_AgamP3.6__(VectorBase)   (African malaria mosquito)   3
Ascaris_suum_Victoria/Ghent_   (Pig roundworm)   7
Caenorhabditis_elegans_WormBase_WS218__(WormBase)   (Roundworm)   3
Paracoccidioides_brasiliensis_Pb01_ 1
Paracoccidioides_brasiliensis_Pb03_ 1
Coccidioides_posadasii_str._Silveira_ 1
Coccidioides_immitis_RMSCC_3703_ 1
Coccidioides_immitis_RMSCC_2394_ 1
Coccidioides_immitis_H538.4_ 1
Aspergillus_fumigatus_A1163_ 1
Saccharomyces_cerevisiae_UC5 1
Saccharomyces_cerevisiae_PW5 1
Saccharomyces_cerevisiae_CLIB324 1
Saccharomyces_cerevisiae_CBS7960 1
Saccharomyces_cerevisiae_YJM269 1
Saccharomyces_cerevisiae_T7 1
Saccharomyces_cerevisiae_Vin13 1
Saccharomyces_cerevisiae_AWRI796 1
Saccharomyces_cerevisiae_Sigma1278b 1
Saccharomyces_cerevisiae_W303 1
Saccharomyces_cerevisiae_JAY291 1
Saccharomyces_cerevisiae_T73 1
Saccharomyces_cerevisiae_YJM789_ 1
Saccharomyces_cerevisiae_YJM789 1
Saccharomyces_cerevisiae_RM11-1a 1
Saccharomyces_cerevisiae_RM11-1a_ 1
Saccharomyces_cerevisiae_SGD_(SGD)   (Baker's yeast)   1
Batrachochytrium_dendrobatidis_JEL423_ 0
Batrachochytrium_dendrobatidis_JAM81_ 0
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   3
Hordeum_vulgare_22   (Domesticated barley)   11
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   4
Trypanosoma_brucei_Lister_427_v4.1 1
Cyanothece_sp._PCC_7822 0
Mycoplasma_hyorhinis_SK76 1
Mycoplasma_hyorhinis_MCLD 1
Mycoplasma_hyorhinis_HUB-1 1
Mycoplasma_hyorhinis_DBS_1050 1
Frankia_sp._EuI1c 0
Frankia_sp._CcI3 1
Nocardiopsis_alba_ATCC_BAA-2165 2
Streptomyces_albus_J1074 0
Streptomyces_davawensis_JCM_4913 1
Streptomyces_fulvissimus_DSM_40593 0
Streptomyces_venezuelae_ATCC_10712 0
Streptomyces_collinus_Tu_365 0
Streptomyces_hygroscopicus_subsp._jinggangensis_TL01 0
Saccharothrix_espanaensis_DSM_44229 3
Amycolatopsis_mediterranei_RB 0
Amycolatopsis_mediterranei_S699 0
Amycolatopsis_mediterranei_S699 0
Amycolatopsis_orientalis_HCCB10007 0
Propionibacterium_acnes_ATCC_11828 1
Actinoplanes_friuliensis_DSM_7358 2
Leifsonia_xyli_subsp._cynodontis_DSM_46306 1
Clavibacter_michiganensis_subsp._sepedonicus 0
Clavibacter_michiganensis_subsp._nebraskensis_NCPPB_2581 1
Bifidobacterium_longum_NCC2705 1
Bifidobacterium_longum_DJO10A 1
Bifidobacterium_longum_subsp._infantis_157F 1
Bifidobacterium_longum_subsp._infantis_ATCC_15697_=_JCM_1222 1
Bifidobacterium_longum_subsp._infantis_ATCC_15697_=_JCM_1222 1
Bifidobacterium_longum_subsp._longum_KACC_91563 1
Bifidobacterium_longum_subsp._longum_BBMN68 1
Bifidobacterium_longum_subsp._longum_F8 1
Bifidobacterium_longum_subsp._longum_JCM_1217 1
Bifidobacterium_thermophilum_RBL67 1
Bifidobacterium_animalis_subsp._animalis_ATCC_25527 1
Bifidobacterium_animalis_subsp._lactis_Bl12 1
Bifidobacterium_animalis_subsp._lactis_B420 1
Bifidobacterium_animalis_subsp._lactis_ATCC_27673 1
Bifidobacterium_animalis_subsp._lactis_BLC1 1
Bifidobacterium_animalis_subsp._lactis_CNCM_I-2494 1
Bifidobacterium_animalis_subsp._lactis_Bi-07 1
Bifidobacterium_animalis_subsp._lactis_V9 1
Bifidobacterium_animalis_subsp._lactis_DSM_10140 1
Bifidobacterium_animalis_subsp._lactis_BB-12 1
Bifidobacterium_animalis_subsp._lactis_AD011 1
Bifidobacterium_breve_UCC2003 0
Bifidobacterium_asteroides_PRL2011 1
Bifidobacterium_bifidum_PRL2010 1
Bifidobacterium_bifidum_BGN4 1
Actinomyces_odontolyticus_ATCC_17982 1
Chthonomonas_calidirosea_T49 1
Thermus_thermophilus_JL-18 1
Eubacterium_siraeum_V10Sc8a 0
Clostridium_thermocellum_DSM_1313 1
[Clostridium]_stercorarium_Clostridiu_subsp._stercorarium_DSM_8532 0
Ruminococcus_champanellensis_18P13 0
Clostridium_acidurici_9a 0
Desulfosporosinus_meridiei_DSM_13257 0
Desulfitobacterium_dichloroeliminans_LMG_P-21439 0
Desulfitobacterium_hafniense_DCB-2 0
Desulfotomaculum_gibsoniae_DSM_7213 0
Roseburia_intestinalis_XB6B4 2
Candidatus_Arthromitus_sp._SFB-rat-Yit 2
Candidatus_Arthromitus_sp._SFB-mouse-Yit 1
Clostridium_sp._SY8519 3
Clostridium_saccharobutylicum_DSM_13864 0
Clostridium_perfringens_str._13 0
Clostridium_botulinum_E3_str._Alaska_E43 0
Clostridium_acetobutylicum_DSM_1731 1
Clostridium_acetobutylicum_EA_2018 1
Carnobacterium_maltaromaticum_LMA28 0
Enterococcus_mundtii_QU_25 0
Enterococcus_casseliflavus_EC20 0
Thermobacillus_composti_KWC4 0
Paenibacillus_sp._Y412MC10 1
Paenibacillus_mucilaginosus_KNP414 3
Paenibacillus_mucilaginosus_K02 1
Paenibacillus_larvae_subsp._larvae_DSM_25430 1
Paenibacillus_polymyxa_CR1 0
Paenibacillus_polymyxa_SC2 3
Paenibacillus_polymyxa_E681 1
Listeria_monocytogenes_serotype_4b_str._LL195 0
Listeria_monocytogenes_07PF0776 0
Listeria_monocytogenes_M7 0
Listeria_monocytogenes_J1-220 0
Listeria_monocytogenes_J1816 0
Listeria_monocytogenes_SLCC2376 0
Listeria_monocytogenes_ATCC_19117 0
Listeria_monocytogenes_L312 0
Listeria_monocytogenes_SLCC2378 0
Listeria_monocytogenes_L99 0
Listeria_monocytogenes_HCC23 0
Listeria_monocytogenes_serotype_4b_str._F2365 0
Bacillus_amyloliquefaciens_subsp._plantarum_YAU_B9601-Y2 1
Bacillus_amyloliquefaciens_Y2 1
Bacillus_amyloliquefaciens_LL3 1
Bacillus_infantis_NRRL_B-14911 1
Bacillus_cereus_subsp._cytotoxis_NVH_391-98 1
Bacillus_toyonensis_BCT-7112 0
Bacillus_thuringiensis_HD-789 1
Bacillus_thuringiensis_MC28 0
Bacillus_thuringiensis_serovar_chinensis_CT-43 0
Bacillus_thuringiensis_serovar_kurstaki_str._HD73 0
Bacillus_thuringiensis_BMB171 0
Bacillus_thuringiensis_serovar_thuringiensis_str._IS5056 1
Bacillus_cereus_B4264 1
Salinibacter_ruber_DSM_13855 1
Echinicola_vietnamensis_DSM_17526 1
Emticicia_oligotrophica_DSM_17448 3
Prevotella_dentalis_DSM_3688 2
Porphyromonas_gingivalis_TDC60 1
Porphyromonas_gingivalis_W83 1
Alistipes_shahii_WAL_8301 2
Bacteroides_fragilis_638R 2
Bacteroides_fragilis_NCTC_9343 2
Nonlabens_dokdonensis_DSW-6 2
Riemerella_anatipestifer_RA-CH-2 1
Riemerella_anatipestifer_RA-GD 1
Riemerella_anatipestifer_ATCC_11845_=_DSM_15868 1
Fibrobacter_succinogenes_subsp._succinogenes_S85 0
Singulisphaera_acidiphila_DSM_18658 0
Leptospira_borgpetersenii_serovar_Hardjo-bovis_str._JB197 1
Leptospira_interrogans_serovar_Lai_str._56601 1
Leptospira_interrogans_serovar_Copenhageni_str._Fiocruz_L1-130 1
Leptospira_biflexa_serovar_Patoc_strain_'Patoc_1_(Ames)' 1
Brachyspira_pilosicoli_WesB 0
Brachyspira_pilosicoli_B2904 0
Bdellovibrio_bacteriovorus_str._Tiberius 2
Campylobacter_jejuni_RM1221 0
Campylobacter_jejuni_subsp._jejuni_00-2544 0
Campylobacter_jejuni_subsp._jejuni_00-2538 0
Campylobacter_jejuni_subsp._jejuni_00-2426 0
Campylobacter_jejuni_subsp._jejuni_00-2425 0
Campylobacter_jejuni_subsp._jejuni_PT14 0
Campylobacter_jejuni_subsp._jejuni_ICDCCJ07001 0
Campylobacter_jejuni_subsp._jejuni_S3 0
Campylobacter_jejuni_subsp._jejuni_IA3902 0
Campylobacter_jejuni_subsp._jejuni_81-176 0
Campylobacter_jejuni_subsp._jejuni_NCTC_11168-BN148 0
Campylobacter_jejuni_subsp._jejuni_NCTC_11168_=_ATCC_700819 0
Campylobacter_coli_76339 0
Campylobacter_coli_15-537360 0
Campylobacter_coli_CVM_N29710 0
Helicobacter_pylori_BM012S 0
Helicobacter_pylori_BM012A 0
Helicobacter_pylori_SouthAfrica20 0
Helicobacter_pylori_UM298 0
Helicobacter_pylori_UM066 0
Helicobacter_pylori_UM299 0
Helicobacter_pylori_UM032 0
Helicobacter_pylori_OK310 0
Helicobacter_pylori_Rif2 0
Helicobacter_pylori_Rif1 0
Helicobacter_pylori_PeCan18 0
Helicobacter_pylori_Shi169 0
Helicobacter_pylori_Shi112 0
Helicobacter_pylori_Shi417 0
Helicobacter_pylori_XZ274 0
Helicobacter_pylori_Aklavik86 0
Helicobacter_pylori_Puno135 0
Helicobacter_pylori_Puno120 0
Helicobacter_pylori_Gambia94/24 0
Helicobacter_pylori_SouthAfrica7 0
Helicobacter_pylori_India7 0
Helicobacter_pylori_2017 0
Helicobacter_pylori_2018 0
Helicobacter_pylori_908 0
Helicobacter_pylori_F57 0
Helicobacter_pylori_F30 0
Helicobacter_pylori_F16 0
Helicobacter_pylori_Sat464 0
Helicobacter_pylori_SJM180 0
Helicobacter_pylori_B8 0
Helicobacter_pylori_52 0
Helicobacter_pylori_v225d 0
Helicobacter_pylori_83 0
Helicobacter_pylori_35A 0
Helicobacter_pylori_P12 0
Helicobacter_pylori_Shi470 0
Helicobacter_pylori_HPAG1 0
Helicobacter_pylori_51 0
Helicobacter_pylori_26695 0
Helicobacter_pylori_26695 0
Desulfobacula_toluolica_Tol2 0
Geobacter_sp._M18 5
Geobacter_sulfurreducens_PCA 1
Anaeromyxobacter_sp._K 2
Anaeromyxobacter_dehalogenans_2CP-C 2
Myxococcus_stipitatus_DSM_14675 2
Neisseria_meningitidis_G2136 1
Ralstonia_solanacearum_FQY_4 0
Ralstonia_solanacearum_Po82 0
Ralstonia_solanacearum_CMR15 1
Ralstonia_solanacearum_GMI1000 1
Burkholderia_sp._YI23 1
Burkholderia_thailandensis_MSMB121 1
Burkholderia_pseudomallei_1026b 1
Burkholderia_pseudomallei_1710b 2
Burkholderia_cepacia_GG4 1
Candidatus_Symbiobacter_mobilis_Comamonadaceae_bacterium_CR 0
Achromobacter_xylosoxidans_NBRC_15126_=_ATCC_27061 1
Rhodobacter_sphaeroides_ATCC_17025 1
Sinorhizobium_meliloti_SM11 1
Simiduia_agarivorans_SA1_=_DSM_21679 1
Mannheimia_haemolytica_USDA-ARS-USMARC-185 0
Actinobacillus_pleuropneumoniae_serovar_7_str._AP76 1
Aeromonas_hydrophila_ML09-119 1
Vibrio_sp._EJY3 1
Vibrio_cholerae_M66-2 1
Vibrio_cholerae_O395 1
Vibrio_cholerae_IEC224 2
Vibrio_cholerae_MJ-1236 1
Vibrio_cholerae_O1_biovar_El_Tor_str._N16961 1
Shewanella_sp._W3-18-1 0
Shewanella_sp._ANA-3 0
Shewanella_baltica_BA175 0
Shewanella_baltica_OS678 0
Shewanella_baltica_OS117 0
Shewanella_baltica_OS223 0
Shewanella_baltica_OS195 0
Shewanella_baltica_OS155 0
Shewanella_sp._MR-7 0
Shewanella_putrefaciens_200 0
Glaciecola_psychrophila_170 1
Alteromonas_macleodii_str._'Ionian_Sea_UM7' 1
Alteromonas_macleodii_AltDE1 1
Alteromonas_macleodii_str._'English_Channel_673' 2
Stenotrophomonas_maltophilia_D457 1
Stenotrophomonas_maltophilia_JV3 1
Xanthomonas_citri_subsp._citri_Aw12879 1
Xanthomonas_axonopodis_Xac29-1 1
Proteus_mirabilis_BB2000 1
Edwardsiella_tarda_C07-087 1
Rahnella_aquatilis_HX2 2
Yersinia_pseudotuberculosis_PB1/+ 0
Yersinia_pseudotuberculosis_YPIII 0
Yersinia_pseudotuberculosis_IP_32953 0
Yersinia_pestis_biovar_Microtus_str._91001 1
Yersinia_pestis_A1122 2
Yersinia_pestis_Z176003 2
Yersinia_pestis_D182038 2
Yersinia_pestis_D106004 2
Yersinia_pestis_biovar_Medievalis_str._Harbin_35 2
Yersinia_pestis_Nepal516 2
Yersinia_pestis_Antiqua 2
Yersinia_pestis_Angola 2
Yersinia_pestis_CO92 2
Yersinia_pestis_KIM10+ 2
Serratia_sp._AS13 0
Serratia_plymuthica_4Rx13 0
Dickeya_dadantii_Ech586 1
Pantoea_ananatis_LMG_5342 1
Pantoea_ananatis_AJ13355 1
Cronobacter_sakazakii_CMCC_45402 1
Cronobacter_sakazakii_ATCC_BAA-894 1
Shigella_sonnei_53G 2
Shigella_flexneri_2002017 2
Shigella_flexneri_2a_str._2457T 1
Shigella_flexneri_2a_str._301 2
Shigella_boydii_Sb227 2
Salmonella_bongori_N268-08 1
Salmonella_enterica_subsp._enterica_serovar_4,[5],12:i:-_str._08-1736 1
Salmonella_enterica_subsp._enterica_serovar_Schwarzengrund_str._CVM19633 2
Salmonella_enterica_subsp._enterica_Serovar_Cubana_str._CFSAN002050 1
Salmonella_enterica_subsp._enterica_serovar_Choleraesuis_str._SC-B67 1
Salmonella_enterica_subsp._enterica_serovar_Newport_str._USMARC-S3124.1 1
Salmonella_enterica_subsp._enterica_serovar_Newport_str._SL254 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._U288 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._798 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._UK-1 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._ST4/74 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._T000240 1
Salmonella_enterica_The_genome_of__subsp._enterica_serovar_Typhimurium_str._DT2 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._D23580 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._SL1344 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._14028S 2
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._LT2 2
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_Definitive_Type_104 1
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18 1
Salmonella_enterica_serovar_Bovismorbificans_genomics 1
Salmonella_enterica_subsp._enterica_serovar_Bareilly_str._CFSAN000189 1
Salmonella_enterica_subsp._enterica_Serovar_Heidelberg_str._CFSAN002069 1
Salmonella_enterica_subsp._enterica_serovar_Heidelberg_str._B182 1
Salmonella_enterica_subsp._enterica_serovar_Heidelberg_str._41578 1
Salmonella_enterica_subsp._enterica_serovar_Heidelberg_str._SL476 1
Salmonella_enterica_subsp._enterica_serovar_Thompson_str._RM6836 1
Klebsiella_oxytoca_KCTC_1686 0
Klebsiella_pneumoniae_subsp._pneumoniae_1084 0
Enterobacter_aerogenes_EA1509E 0
Escherichia_coli_E._coli_PMV-1 3
Escherichia_coli_JJ1886 4
Escherichia_coli_LY180 1
Escherichia_coli_O7:K1_str._CE10 4
Escherichia_coli_O104:H4_str._2009EL-2050 4
Escherichia_coli_O104:H4_str._2009EL-2071 4
Escherichia_coli_O104:H4_str._2011C-3493 3
Escherichia_coli_NA114 1
Escherichia_coli_str._'clone_D_i2' 1
Escherichia_coli_str._'clone_D_i14' 1
Escherichia_coli_UM146 2
Escherichia_coli_042 4
Escherichia_coli_Xuzhou21 5
Escherichia_coli_IHE3034 5
Escherichia_coli_UMNK88 3
Escherichia_coli_O83:H1_str._NRG_857C 2
Escherichia_coli_ABU_83972 1
Escherichia_coli_KO11FL 1
Escherichia_coli_KO11FL 1
Escherichia_coli_LF82 2
Escherichia_coli_ED1a 2
Escherichia_coli_IAI39 2
Escherichia_coli_UMN026 4
Escherichia_coli_55989 4
Escherichia_coli_S88 3
Escherichia_coli_IAI1 2
Escherichia_coli_W 1
Escherichia_coli_W 1
Escherichia_coli_ATCC_8739 1
Escherichia_coli_BL21(DE3) 1
Escherichia_coli_BL21(DE3) 1
Escherichia_coli_SMS-3-5 1
Escherichia_coli_SE15 1
Escherichia_coli_SE11 4
Escherichia_coli_APEC_O1 5
Escherichia_coli_O103:H2_str._12009 9
Escherichia_coli_UTI89 3
Escherichia_coli_536 1
Escherichia_coli_HS 1
Escherichia_coli_ETEC_H10407 3
Escherichia_coli_O55:H7_str._RM12579 8
Escherichia_coli_O55:H7_str._CB9615 7
Escherichia_coli_O26:H11_str._11368 10
Escherichia_coli_CFT073 2
Escherichia_coli_O111:H-_str._11128 8
Escherichia_coli_O127:H6_str._E2348/69 3
Escherichia_coli_O157:H7_str._TW14359 9
Escherichia_coli_O157:H7_str._EC4115 10
Escherichia_coli_O157:H7_str._Sakai 6
Escherichia_coli_O157:H7_str._EDL933 8
Escherichia_coli_BW2952 1
Escherichia_coli_B_str._REL606 1
Enterobacter_cloacae_SCF1 1
Enterobacter_cloacae_EcWSU1 1
Enterobacter_cloacae_subsp._cloacae_NCTC_9394 1
Enterobacter_cloacae_subsp._cloacae_ATCC_13047 1
Pseudomonas_syringae_pv._syringae_B728a 1
Pseudomonas_putida_HB3267 1
Pseudomonas_putida_W619 1
Pseudomonas_putida_GB-1 1
Pseudomonas_protegens_CHA0 1
Pseudomonas_fluorescens_A506 1
Pseudomonas_fluorescens_R124 1
Pseudomonas_aeruginosa_SCV20265 1
Pseudomonas_aeruginosa_MTB-1 1
Pseudomonas_aeruginosa_RP73 1
Pseudomonas_aeruginosa_PA1R 1
Pseudomonas_aeruginosa_PA1 1
Pseudomonas_aeruginosa_DK2 1
Pseudomonas_aeruginosa_M18 1
Pseudomonas_aeruginosa_PA7 2
Pseudomonas_aeruginosa_PAO1 1
Acinetobacter_baumannii_ZW85-1 1
Acinetobacter_baumannii_MDR-TJ 1
Acinetobacter_baumannii_AB307-0294 1
Acinetobacter_baumannii_AB0057 1
Francisella_cf._novicida_Fx1 0
Candidatus_Nitrosoarchaeum_koreensis_Candidatus_Nitrosopumilus_koreensis_AR1 0
Sulfolobus_islandicus_L.S.2.15 0
Sulfolobus_islandicus_M.16.27 0
Sulfolobus_islandicus_M.14.25 0
Sulfolobus_islandicus_L.D.8.5 0
Methanomethylovorans_hollandica_DSM_15978 1
Methanolobus_psychrophilus_R15 1
Ferroplasma_acidarmanus_fer1 0
Halovivax_ruber_XH-70 0
Natronobacterium_gregoryi_SP2 3

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Longest transcript per gene
Genome     Number
Homo_sapiens_69_37   (Human)   12
Pan_troglodytes_69_2.1.4   (Chimpanzee)   14
Gorilla_gorilla_69_3.1   (Western gorilla)   13
Pongo_abelii_69_2   (Sumatran orangutan)   12
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   13
Macaca_mulatta_69_1   (Rhesus monkey)   14
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   12
Otolemur_garnettii_69_3   (Small-eared galago)   11
Microcebus_murinus_69_1   (Gray mouse lemur)   12
Rattus_norvegicus_69_3.4   (Norway rat)   11
Mus_musculus_69_38   (House mouse)   12
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   9
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   12
Cavia_porcellus_69_3   (Domestic guinea pig)   10
Oryctolagus_cuniculus_69_2   (Rabbit)   10
Ochotona_princeps_69   (American pika)   10
Tupaia_belangeri_69   (Northern tree shrew)   8
Sus_scrofa_69_10.2   (Pig)   10
Bos_taurus_69_3.1   (Cattle)   10
Vicugna_pacos_69_1   (Alpaca)   9
Tursiops_truncatus_69_1   (Bottlenose dolphin)   9
Mustela_putorius_furo_69_1.0   (Domestic ferret)   11
Ailuropoda_melanoleuca_69_1   (Giant panda)   12
Canis_familiaris_69_3.1   (Dog)   11
Felis_catus_69   (Domestic cat)   15
Equus_caballus_69_2   (Horse)   11
Myotis_lucifugus_69_2.0   (Little brown bat)   7
Pteropus_vampyrus_69_1   (Large flying fox)   13
Sorex_araneus_69_1   (European shrew)   7
Erinaceus_europaeus_69   (Western European hedgehog)   9
Procavia_capensis_69_1   (Cape rock hyrax)   11
Loxodonta_africana_69_3   (African savanna elephant)   15
Echinops_telfairi_69   (Small Madagascar hedgehog)   15
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   12
Choloepus_hoffmanni_69_1   (Hoffmann's two-fingered sloth)   8
Macropus_eugenii_69_1.0   (Tammar wallaby)   8
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   11
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   13
Ornithorhynchus_anatinus_69_5   (Platypus)   12
Petromyzon_marinus_69_7.0   (Sea lamprey)   8
Meleagris_gallopavo_69_2   (Turkey)   7
Gallus_gallus_69_2   (Chicken)   7
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   11
Pelodiscus_sinensis_69_1.0   (Chinese soft-shelled turtle)   12
Anolis_carolinensis_69_2.0   (Green anole)   9
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   8
Latimeria_chalumnae_69_1   (Coelacanth)   8
Gadus_morhua_69_1   (Atlantic cod)   13
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   13
Takifugu_rubripes_69_4   (Torafugu)   14
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   15
Oryzias_latipes_69_1   (Japanese medaka)   8
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   13
Oreochromis_niloticus_69_1.0   (Nile tilapia)   17
Danio_rerio_69_9   (Zebrafish)   20
Ciona_savignyi_69_2.0   (Pacific transparent sea squirt)   5
Ciona_intestinalis_69   (Vase tunicate)   5
Drosophila_melanogaster_69_5   (Fruit fly)   1
Caenorhabditis_elegans_69_215   (Roundworm)   2
Saccharomyces_cerevisiae_69_4   (Baker's yeast)   1
Arabidopsis_thaliana_10   (Thale cress)   4

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Others
Genome     Number
Homo_sapiens_75_37_(old_version_GRC)   (Human)   40
Homo_sapiens__(NCBI_version)   (Human)   18
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   12
Loa_loa_v3.3_(Request)   (Eye worm)   2
Wuchereria_bancrofti_v1.0_(Request)   (Agent of lymphatic filariasis)   11
Brugia_malayi_v1.0_(Duplicate)   (Agent of lymphatic filariasis)   3
Lotus_japonicus__(Early_assembly) 2
Malus_x_domestica_(Duplicate)   (Apple)   4
Ricinus_communis__(Early_assembly)   (Castor bean)   2
Nicotiana_benthamiana_0.4.4_(Early_draft) 6
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   2
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   2
Phoenix_dactylifera__(Early_draft)   (Date palm)   4
NCBI_plasmid_sequences_(Plasmids) 39
Protein_Data_Bank_(all_PDB_sequenc) 7
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 2
TargetDB__(Targets) 15
Protozoadb_2010_08_(Protozoadb) 7
PDB_chains_(SCOP_1.75)_(PDB) 6
STRING_v9.0.5_(STRING) 788
NCBI_viral_sequences_(Viral) 82
Uniprot_2018_03_genome 74070
NCBI_2017_08_genome 34710
UniProt__viral_sequences_(Viral) 42

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