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Domain combinations for DNA-binding domain of EIN3-like superfamily in groups of genomes

Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a DNA-binding domain of EIN3-like domain in that genome.

Complete genomes
Genome     Number   Proteins
Tremella_mesenterica_   (Witches' butter)   1 1
Aspergillus_wentii_v1.0 1 1
Wickerhamomyces_anomalus 1 1
Pichia_pastoris_GS115_ 1 1
Yarrowia_lipolytica_CLIB122 1 1
Selaginella_moellendorffii_ 10 10
Picea_abies   (Norway spruce)   3 3
Eucalyptus_grandis_v201   (Rose gum)   5 5
Theobroma_cacao_B97-61/B2_v1   (Cacao)   3 3
Gossypium_raimondii_v221 15 15
Citrus_clementina_v165 12 12
Citrus_sinensis_v154   (Sweet orange)   19 19
Thellungiella_halophila_v173 6 6
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   8 8
Capsella_rubella_v183 6 6
Arabidopsis_lyrata_   (Lyrate rockcress)   6 6
Arabidopsis_thaliana_10   (Thale cress)   6 6
Carica_papaya_   (Papaya)   3 3
Medicago_truncatula_   (Barrel medic)   9 9
Phaseolus_vulgaris_v186   (French bean)   7 7
Glycine_max_v109   (Soybean)   13 13
Cucumis_sativus_v122   (Cucumber)   9 9
Fragaria_vesca_   (Wild strawberry)   5 5
Malus_domestica_v196   (Apple)   14 14
Prunus_persica_v139   (Peach)   4 4
Linum_usitatissimum_v200   (Flax)   4 4
Manihot_esculenta_v147   (Cassava)   2 2
Populus_trichocarpa_v156   (Black cottonwood)   8 8
Vitis_vinifera_   (Wine grape)   2 2
Mimulus_guttatus_v140   (Spotted monkey flower)   8 8
Solanum_lycopersicum_v.2.3   (Tomato)   9 9
Solanum_tuberosum_   (Potato)   11 11
Actinidia_chinensis_Hongyang_ 8 8
Aquilegia_coerulea_v195 5 5
Triticum_urartu_22 6 6
Triticum_aestivum_22   (Bread wheat)   15 15
Aegilops_tauschii_22 4 4
Brachypodium_distachyon_   (Stiff brome)   6 6
Oryza_barthii_22   (African wild rice)   8 8
Oryza_meridionalis_22 8 8
Oryza_glumaepatula_22 8 8
Oryza_glaberrima   (African rice)   6 6
Oryza_punctata_22 9 9
Oryza_nivara_22 8 8
Oryza_brachyantha_22   (Malo sina)   8 7
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   11 11
Oryza_sativa_v193   (Rice)   11 11
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   8 8
Panicum_virgatum_v202   (Switchgrass)   14 14
Setaria_italica_v164   (Foxtail millet)   9 9
Zea_mays_subsp._mays_   (Maize)   9 9
Zea_mays_v181   (Maize)   9 9
Sorghum_bicolor_   (Sorghum)   7 7
Musa_balbisiana   (Balbis banana)   20 20
Musa_acuminata_22   (Wild Malaysian banana)   16 16
Amborella_trichopoda_22 2 2
Physcomitrella_patens 2 2

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Strains
Genome     Number   Proteins
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   3 3
Hordeum_vulgare_22   (Domesticated barley)   11 11
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   10 10

Longest transcript per gene
Genome     Number   Proteins
Arabidopsis_thaliana_10   (Thale cress)   6 6

Others
Genome     Number   Proteins
Lotus_japonicus__(Early_assembly) 7 7
Malus_x_domestica_(Duplicate)   (Apple)   14 14
Ricinus_communis__(Early_assembly)   (Castor bean)   4 4
Nicotiana_benthamiana_0.4.4_(Early_draft) 3 3
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   9 9
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   9 9
Phoenix_dactylifera__(Early_draft)   (Date palm)   4 4
STRING_v9.0.5_(STRING) 55 55
NCBI_2017_08_genome 824 821
Uniprot_2018_03_genome 836 835
Protein_Data_Bank_(all_PDB_sequenc) 3 3
PDB_chains_(SCOP_1.75)_(PDB) 1 1
TargetDB__(Targets) 1 1
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 7 7

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