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Domain combinations for Cadherin-like superfamily in groups of genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a Cadherin-like domain in that genome.

Complete genomes
Genome     Number   Proteins
Homo_sapiens_76_38   (Human)   2079 350
Pan_troglodytes_76_2.1.4   (Chimpanzee)   756 107
Gorilla_gorilla_76_3.1   (Western gorilla)   952 132
Pongo_abelii_76_2   (Sumatran orangutan)   528 79
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   613 87
Papio_anubis_76   (Olive baboon)   617 86
Macaca_mulatta_76_1   (Rhesus monkey)   918 149
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   1188 171
Otolemur_garnettii_76_3   (Small-eared galago)   607 86
Microcebus_murinus_76_1   (Gray mouse lemur)   448 68
Rattus_norvegicus_76_5.0   (Norway rat)   840 125
Mus_musculus_76_38   (House mouse)   1275 186
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   418 67
Ictidomys_tridecemlineatus_76_2   (Thirteen-lined ground squirrel)   611 97
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   634 84
Cavia_porcellus_76_3   (Domestic guinea pig)   553 80
Oryctolagus_cuniculus_76_2   (Rabbit)   651 81
Ochotona_princeps_76   (American pika)   440 70
Tupaia_belangeri_76   (Northern tree shrew)   409 62
Sus_scrofa_76_10.2   (Pig)   631 103
Bos_taurus_76_3.1   (Cattle)   685 100
Ovis_aries_76_3.1   (Sheep)   701 94
Vicugna_pacos_76_1   (Alpaca)   348 60
Tursiops_truncatus_76_1   (Bottlenose dolphin)   508 74
Mustela_putorius_furo_76_1.0   (Domestic ferret)   548 72
Ailuropoda_melanoleuca_76_1   (Giant panda)   742 99
Canis_familiaris_76_3.1   (Dog)   684 96
Felis_catus_76_6.2   (Domestic cat)   629 87
Equus_caballus_76_2   (Horse)   789 101
Myotis_lucifugus_76_2.0   (Little brown bat)   633 85
Pteropus_vampyrus_76_1   (Large flying fox)   523 77
Sorex_araneus_76_1   (European shrew)   374 62
Erinaceus_europaeus_76   (Western European hedgehog)   428 68
Procavia_capensis_76_1   (Cape rock hyrax)   483 75
Loxodonta_africana_76_3   (African savanna elephant)   699 105
Echinops_telfairi_76   (Small Madagascar hedgehog)   402 65
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   668 96
Choloepus_hoffmanni_76_1   (Hoffmann's two-fingered sloth)   297 54
Macropus_eugenii_76_1.0   (Tammar wallaby)   418 70
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   666 92
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   598 83
Ornithorhynchus_anatinus_76_5   (Platypus)   541 117
Saccoglossus_kowalevskii_v3.0 997 82
Petromyzon_marinus_76_7.0   (Sea lamprey)   209 40
Meleagris_gallopavo_76_2   (Turkey)   659 86
Gallus_gallus_76_4   (Chicken)   577 70
Anas_platyrhynchos_76_1.0   (Mallard)   539 72
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   505 67
Ficedula_albicollis_76_1.0   (Collared flycatcher)   647 88
Pelodiscus_sinensis_76_1.0   (Chinese soft-shelled turtle)   667 89
Anolis_carolinensis_76_2.0   (Green anole)   888 131
Xenopus_laevis_   (African clawed frog)   370 77
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   666 96
Latimeria_chalumnae_76_1   (Coelacanth)   708 96
Lepisosteus_oculatus_76   (Spotted gar)   1016 112
Gadus_morhua_76_1   (Atlantic cod)   851 123
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   995 148
Takifugu_rubripes_76_4   (Torafugu)   3757 475
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   867 110
Oryzias_latipes_76_1   (Japanese medaka)   842 114
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   734 107
Poecilia_formosa_76   (Amazon molly)   966 108
Oreochromis_niloticus_76_1.0   (Nile tilapia)   1072 138
Astyanax_mexicanus_76   (Mexican tetra)   989 138
Danio_rerio_76_9   (Zebrafish)   1727 254
Oikopleura_dioica 82 22
Ciona_savignyi_76_2.0   (Pacific transparent sea squirt)   372 32
Ciona_intestinalis_76   (Vase tunicate)   136 21
Strongylocentrotus_purpuratus_v3.1   (Purple sea urchin)   264 41
Adineta_vaga 154 36
Octopus_bimaculoides_280 1159 238
Crassostrea_gigas_22   (Pacific oyster)   729 99
Lottia_gigantea_   (Owl limpet)   633 85
Helobdella_robusta_ 343 95
Capitella_sp._I_ 546 75
Danaus_plexippus_OGS1.0   (Monarch butterfly)   205 22
Heliconius_melpomene_   (Postman butterfly)   176 26
Bombyx_mori_   (Domestic silkworm)   181 48
Nasonia_vitripennis_   (Jewel wasp)   137 13
Apis_mellifera_38.2d_(Not_maintained)   (Honey bee)   700 68
Harpegnathos_saltator_v3.3   (Jerdon's jumping ant)   202 23
Linepithema_humile_v1.1   (Argentine ant)   198 33
Pogonomyrmex_barbatus_v1.2   (Red harvester ant)   198 41
Solenopsis_invicta_v.2.2.3   (Red fire ant)   149 38
Acromyrmex_echinatior_v3.8   (Panamanian leafcutter ant)   199 24
Atta_cephalotes_v1.1 215 42
Camponotus_floridanus_v3.3   (Florida carpenter ant)   199 21
Lucilia_cuprina   (Australian sheep blowfly)   200 22
Drosophila_grimshawi_1.3 224 24
Drosophila_willistoni_1.3 202 19
Drosophila_pseudoobscura_2.13 198 18
Drosophila_persimilis_1.3 194 25
Drosophila_suzukii 211 21
Drosophila_yakuba_1.3 208 19
Drosophila_simulans_1.3 161 20
Drosophila_sechellia_1.3 201 27
Drosophila_melanogaster_76_5   (Fruit fly)   573 51
Drosophila_erecta_1.3 202 20
Drosophila_ananassae_1.3 209 22
Drosophila_virilis_1.2 215 18
Drosophila_mojavensis_1.3 201 21
Megaselia_scalaris_22 79 26
Aedes_aegypti_55_(Not_maintained)   (Yellow fever mosquito)   176 25
Culex_pipiens_quinquefasciatus_   (Southern house mosquito)   206 33
Anopheles_darlingi_22   (American malaria mosquito)   129 20
Anopheles_gambiae_49_3j   (African malaria mosquito)   297 42
Tribolium_castaneum_3.0   (Red flour beetle)   212 24
Pediculus_humanus_corporis__(Early_assembly)   (Human body louse)   201 18
Acyrthosiphon_pisum_   (Pea aphid)   127 16
Rhodnius_prolixus_22 191 28
Daphnia_pulex_   (Common water flea)   238 24
Strigamia_maritima_22 217 27
Sarcoptes_scabiei 132 18
Tetranychus_urticae_   (Two-spotted spider mite)   172 18
Ixodes_scapularis__(Preliminary)   (Black-legged tick)   178 21
Pristionchus_pacificus_ 96 21
Meloidogyne_incognita_   (Southern root-knot nematode)   15 9
Meloidogyne_hapla_ 23 11
Onchocerca_volvulus_22 127 17
Brugia_malayi_WS250   (Agent of lymphatic filariasis)   121 21
Caenorhabditis_japonica_ 129 24
Caenorhabditis_brenneri_ 169 24
Caenorhabditis_remanei_ 151 23
Caenorhabditis_elegans_76_235   (Roundworm)   231 31
Caenorhabditis_briggsae_2 142 21
Trichinella_spiralis_22 162 20
Hymenolepis_microstoma_ 248 42
Echinococcus_multilocularis_ 252 41
Echinococcus_granulosus_ 250 40
Taenia_solium_   (Pork tapeworm)   214 53
Schistosoma_mansoni_ 228 61
Mnemiopsis_leidyi   (Sea walnut)   43 8
Acropora_digitifera_v1.0 301 51
Nematostella_vectensis_1.0   (Starlet sea anemone)   487 65
Hydra_vulgaris 207 18
Amphimedon_queenslandica 386 24
Trichoplax_adhaerens_ 100 16
Proterospongia_sp._ATCC_50818_ 333 30
Monosiga_brevicollis_ 269 19
Capsaspora_owczarzaki_ATCC_30864_ 13 3
Mortierella_verticillata_NRRL_6337_ 4 2
Malassezia_globosa_CBS_7966_ 8 4
Sporisorium_reilianum_22 5 2
Ustilago_maydis_ 5 2
Mixia_osmundae_IAM_14324_v1.0 2 1
Cronartium_quercuum_f._sp._fusiforme_G11_v1.0 4 2
Puccinia_graminis_f._sp._tritici_CRL_75-36-700-3_ 3 1
Melampsora_laricis-populina_ 4 1
Rhodotorula_graminis_WP1_v1.0 3 1
Microbotryum_violaceum_22 3 1
Wallemia_sebi_v1.0 1 1
Sphaerobolus_stellatus_v1.0 2 2
Piloderma_croceum_F_1598_v1.0 2 1
Serpula_lacrymans_var._lacrymans_S7.9_ 2 1
Coniophora_puteana 3 2
Hydnomerulius_pinastri_v2.0 4 2
Paxillus_rubicundulus_Ve08.2h10_v1.0 4 2
Pisolithus_microcarpus_441_v1.0 3 2
Pisolithus_tinctorius_Marx_270_v1.0 3 2
Scleroderma_citrinum_Foug_A_v1.0 3 2
Coprinopsis_cinerea_okayama7_130_v3 3 2
Pleurotus_ostreatus_   (Oyster mushroom)   3 2
Amanita_thiersii_Skay4041_v1.0 3 2
Amanita_muscaria_Koide_v1.0   (Fly agaric)   4 2
Galerina_marginata_v1.0 3 1
Hebeloma_cylindrosporum_h7_v2.0 3 2
Laccaria_bicolor_S238N-H82_ 3 2
Agaricus_bisporus_var._bisporus_ 3 2
Schizophyllum_commune_ 2 1
Stereum_hirsutum_FP-91666_SS1__v1.0 2 1
Heterobasidion_annosum_ 2 1
Gloeophyllum_trabeumv1.0 3 2
Punctularia_strigosozonata_v1.0 4 2
Sebacina_vermifera_MAFF_305830_v1.0 1 1
Fomitiporia_mediterranea_v1.0 1 1
Tulasnella_calospora_AL13/4D_v1.0 6 6
Postia_placenta_ 6 2
Wolfiporia_cocos_MD-104_SS10__v1.0 2 1
Fomitopsis_pinicolav1.0 3 2
Fomitopsis_pinicola_FP-58527_SS1_v3.0 3 2
Phanerochaete_chrysosporium_RP-78_2.1 3 2
Dichomitus_squalens 4 2
Trametes_versicolor_v1.0 4 2
Tremella_mesenterica_   (Witches' butter)   7 2
Daldinia_eschscholzii_EC12_v1.0 3 1
Apiospora_montagnei_NRRL_25634_v1.0 3 1
Magnaporthe_poae_ATCC_64411_22 3 1
Magnaporthe_grisea_70-15_ 3 1
Podospora_anserina_ 4 1
Thielavia_terrestris_NRRL_8126_ 4 1
Chaetomium_globosum_CBS_148.51_ 4 1
Neurospora_tetrasperma_ 3 1
Neurospora_discreta_FGSC_8579_ 3 1
Neurospora_crassa_OR74A_ 3 1
Cryphonectria_parasitica_   (Chestnut blight fungus)   3 1
Acremonium_alcalophilumv_1.0 3 1
Glomerella_graminicola_22 2 1
Fusarium_graminearum_ 4 2
Nectria_haematococca_mpVI_ 3 1
Fusarium_oxysporum_f._sp._lycopersici_4286_ 3 1
Fusarium_verticillioides_7600_ 3 1
Trichoderma_asperellum_CBS_433.97_v1.0 4 2
Trichoderma_atroviride_ 4 2
Trichoderma_citrinoviride_v1.0 3 1
Trichoderma_reesei_1.2 3 1
Trichoderma_virens_Gv29-8_ 4 2
Trichoderma_longibrachiatum_ATCC_18648_v1.0 3 1
Trichoderma_harzianum_CBS_226.95_v1.0 4 2
Didymella_exigua_CBS_183.55_v1.0 4 1
Leptosphaeria_maculans_22 4 1
Pyrenophora_teres_f._teres_22 4 1
Pyrenophora_tritici-repentis_ 3 1
Stagonospora_nodorum_ 3 1
Zasmidium_cellare_ATCC_36951_v1.0 4 1
Dothistroma_septosporum 4 1
Septoria_musiva_v1.0 4 1
Aureobasidium_pullulans_var._subglaciale_EXF-2481_v1.0 2 1
Aspergillus_zonatus_v1.0 4 1
Penicillium_chrysogenum_Wisconsin_54-1255_ 4 1
Penicillium_chrysogenum_v1.0 4 1
Aspergillus_acidus_v1.0 4 1
Aspergillus_fumigatus_Af293 3 1
Aspergillus_brasiliensis_v1.0 4 1
Aspergillus_nidulans_FGSC_A4_ 3 1
Aspergillus_sydowii_v1.0 3 1
Aspergillus_versicolor_v1.0 3 1
Aspergillus_glaucus 3 1
Aspergillus_carbonarius_ITEM_5010_ 4 1
Neosartorya_fischeri_NRRL_181_ 4 1
Aspergillus_terreus_NIH2624_ 4 1
Aspergillus_tubingensis_v1.0 4 1
Aspergillus_wentii_v1.0 4 1
Aspergillus_oryzae_RIB40_ 4 1
Aspergillus_niger_22 4 1
Aspergillus_niger_ATCC_1015_ 4 1
Aspergillus_flavus_NRRL3357_ 3 1
Aspergillus_clavatus_NRRL_1_ 3 1
Penicillium_marneffei_ATCC_18224_ 4 1
Hansenula_polymorpha_v2.0 4 1
Dekkera_bruxellensis_CBS_2499_v2.0 3 1
Pichia_membranifaciensv1.0 3 1
Candida_tanzawaensis_NRRL_Y-17324__v1.0 3 1
Candida_dubliniensis_CD36_ 4 1
Candida_tropicalis_MYA-3404_ 4 1
Candida_parapsilosis_ 3 1
Candida_albicans_SC5314 4 1
Lodderomyces_elongisporus_NRRL_YB-4239_ 2 1
Babjeviella_inositovora_NRRL_Y-12698_v1.0 3 1
Pichia_stipitis_CBS_6054_ 3 1
Candida_guilliermondii_ATCC_6260_ 4 1
Hyphopichia_burtonii_NRRL_Y-1933_v1.0 3 1
Debaromyces_hansenii 4 1
Wickerhamomyces_anomalus 3 1
Pichia_pastoris_GS115_ 3 1
Hanseniaspora_valbyensis_NRRL_Y-1626_v1.1 2 1
Yarrowia_lipolytica_CLIB122 3 1
Candida_lusitaniae_ATCC_42720_ 3 1
Metschnikowia_bicuspidata_NRRL_YB-4993_v1.0 4 1
Vanderwaltozyma_polyspora_DSM_70294_ 3 1
Candida_glabrata_CBS138 3 1
Kluyveromyces_thermotolerans_CBS_6340 3 1
Lachancea_kluyveri_ 3 1
Kluyveromyces_waltii 3 1
Ashbya_gossypii_ATCC_10895_ 3 1
Zygosaccharomyces_rouxii_ 3 1
Saccharomyces_mikatae_MIT 3 1
Saccharomyces_paradoxus_MIT 3 1
Saccharomyces_cerevisiae_76   (Baker's yeast)   3 1
Saccharomyces_bayanus_MIT 3 1
Kluyveromyces_lactis 3 1
Allomyces_macrogynus_ATCC_38327_ 8 4
Spizellomyces_punctatus_DAOM_BR117_ 1 1
Dictyostelium_discoideum 1 1
Medicago_truncatula_   (Barrel medic)   1 1
Solanum_lycopersicum_v.2.3   (Tomato)   1 1
Ostreococcus_sp._RCC809_ 1 1
Ostreococcus_lucimarinus_CCE9901_ 1 1
Ostreococcus_tauri_ 1 1
Micromonas_sp._RCC299_ 1 1
Micromonas_pusilla_CCMP1545_v3.0 1 1
Thecamonas_trahens_ATCC_50062_ 10 3
Albugo_laibachii_22 59 1
Pythium_iwayamai_DAOM_BR242034_22 51 1
Pythium_ultimum_v1.7-2 58 4
Pythium_irregulare_DAOM_BR486_22 28 1
Phytophthora_infestans_T30-4_ 14 2
Tetrahymena_thermophila_SB210_1_ 56 50
Ichthyophthirius_multifiliis_strain_G5_ 2 2
Symbiodinium_minutum_clade_B1_v1.2 22 7
Naegleria_gruberi_ 1 1
Trichomonas_vaginalis_ 1 1
Guillardia_theta_CCMP2712_v1.0_ 3 3
Emiliania_huxleyi_CCMP1516_ 1 1
Leptolyngbya_sp._PCC_7376 1 1
Pseudanabaena_sp._PCC_7367 13 2
Synechocystis_sp._PCC_6803 10 1
Synechococcus_sp._PCC_7502 4 1
Synechococcus_sp._PCC_6312 1 1
Microcoleus_sp._PCC_7113 1 1
Trichodesmium_erythraeum_IMS101 5 4
Halothece_sp._PCC_7418 8 5
Gloeobacter_violaceus_PCC_7421 1 1
Rivularia_sp._PCC_7116 19 5
Calothrix_sp._PCC_7507 5 2
Anabaena_variabilis_ATCC_29413 3 3
Nostoc_sp._PCC_7107 1 1
Nostoc_punctiforme_PCC_73102 2 1
Nostoc_sp._PCC_7120 7 2
Nostoc_sp._PCC_7524 59 6
Anabaena_sp._90 13 4
Conexibacter_woesei_DSM_14684 6 2
Eggerthella_sp._YY7918 1 1
Ilumatobacter_coccineus 5 2
Kineococcus_radiotolerans_SRS30216 1 1
Catenulispora_acidiphila_DSM_44928 28 23
Frankia_alni_ACN14a 3 1
Streptosporangium_roseum_DSM_43021 3 1
Kitasatospora_setae_KM-6054 2 2
Streptomyces_sp._PAMC26508 1 1
Streptomyces_sp._SirexAA-E 1 1
Streptomyces_bingchenggensis_BCW-1 3 3
Streptomyces_violaceusniger_Tu_4113 1 1
Streptomyces_avermitilis_MA-4680 2 2
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 3 3
Streptomyces_scabiei_87.22 1 1
Streptomyces_hygroscopicus_subsp._jinggangensis_5008 2 2
Actinosynnema_mirum_DSM_43827 1 1
Amycolatopsis_mediterranei_U32 3 3
Verrucosispora_maris_AB-18-032 1 1
Micromonospora_sp._L5 1 1
Micromonospora_aurantiaca_ATCC_27029 1 1
Actinoplanes_sp._N902-109 5 3
Actinoplanes_sp._SE50/110 11 5
Actinoplanes_missouriensis_431 4 2
Rhodococcus_erythropolis_PR4 2 2
Corynebacterium_resistens_DSM_45100 3 2
Corynebacterium_glutamicum_R 4 2
Corynebacterium_diphtheriae_NCTC_13129 1 1
Tropheryma_whipplei_TW08/27 5 3
Microbacterium_testaceum_StLB037 1 1
Intrasporangium_calvum_DSM_43043 2 1
[Cellvibrio]_gilvus_ATCC_13127 3 1
Arthrobacter_aurescens_TC1 2 1
Arthrobacter_sp._Rue61a 3 2
Arthrobacter_sp._FB24 1 1
Mobiluncus_curtisii_ATCC_43063 1 1
Caldilinea_aerophila_DSM_14535_=_NBRC_104270 2 2
Herpetosiphon_aurantiacus_DSM_785 1 1
Roseiflexus_castenholzii_DSM_13941 9 2
Chloroflexus_sp._MS-G 1 1
Chloroflexus_sp._Y-400-fl 1 1
Chloroflexus_aggregans_DSM_9485 1 1
Chloroflexus_aurantiacus_J-10-fl 1 1
Truepera_radiovictrix_DSM_17093 1 1
Deinococcus_gobiensis_I-0 1 1
Deinococcus_deserti_VCD115 1 1
Deinococcus_maricopensis_DSM_21211 1 1
Deinococcus_geothermalis_DSM_11300 1 1
Deinococcus_proteolyticus_MRP 1 1
Deinococcus_radiodurans_R1 1 1
Oceanithermus_profundus_DSM_14977 1 1
Marinithermus_hydrothermalis_DSM_14884 1 1
Meiothermus_ruber_DSM_1279 1 1
Finegoldia_magna_ATCC_29328 1 1
Clostridium_clariflavum_DSM_19732 1 1
Faecalibacterium_prausnitzii 1 1
Desulfotomaculum_reducens_MI-1 1 1
Acetobacterium_woodii_DSM_1030 1 1
Eubacterium_limosum_KIST612 1 1
Clostridium_sticklandii_DSM_519 2 1
Syntrophomonas_wolfei_subsp._wolfei_str._Goettingen 1 1
Heliobacterium_modesticaldum_Ice1 4 2
Alkaliphilus_metalliredigens_QYMF 2 2
Clostridium_ljungdahlii_DSM_13528 2 1
Mahella_australiensis_50-1_BON 1 1
Caldicellulosiruptor_saccharolyticus_DSM_8903 1 1
Aerococcus_urinae_ACS-120-V-Col10a 1 1
Streptococcus_macedonicus_ACA-DC_198 48 1
Kyrpidia_tusciae_DSM_2912 3 1
Brevibacillus_brevis_NBRC_100599 1 1
Paenibacillus_sp._JDR-2 7 4
Paenibacillus_terrae_HPL-003 1 1
Paenibacillus_mucilaginosus_3016 1 1
Paenibacillus_polymyxa_M1 1 1
Bacillus_selenitireducens_MLS10 1 1
Solibacillus_silvestris_StLB046 1 1
Macrococcus_caseolyticus_JCSC5402 14 1
Staphylococcus_lugdunensis_HKU09-01 33 1
Staphylococcus_epidermidis_RP62A 17 2
Staphylococcus_aureus_subsp._aureus_JH1 2 1
Staphylococcus_aureus 2 1
Melioribacter_roseus_P3M 5 4
Pelodictyon_phaeoclathratiforme_BU-1 5 3
Chlorobium_luteolum_DSM_273 1 1
Chlorobium_chlorochromatii_CaD3 5 2
Chlorobium_phaeobacteroides_DSM_266 2 1
Chlorobium_limicola_DSM_245 6 1
Chlorobaculum_parvum_NCIB_8327 2 1
Chloroherpeton_thalassium_ATCC_35110 9 1
Haliscomenobacter_hydrossis_DSM_1100 10 4
Niastella_koreensis_GR20-10 1 1
Chitinophaga_pinensis_DSM_2588 12 4
Salinibacter_ruber_M8 1 1
Rhodothermus_marinus_DSM_4252 2 1
Cyclobacterium_marinum_DSM_745 1 1
Marivirga_tractuosa_DSM_4126 26 5
Fibrella_aestuarina 8 5
Dyadobacter_fermentans_DSM_18053 4 2
Spirosoma_linguale_DSM_74 6 5
Runella_slithyformis_DSM_19594 12 4
Paludibacter_propionicigenes_WB4 8 3
Bacteroides_thetaiotaomicron_VPI-5482 2 2
Bacteroides_fragilis_YCH46 1 1
Pedobacter_saltans_DSM_12145 5 4
Solitalea_canadensis_DSM_3403 11 2
Pedobacter_heparinus_DSM_2366 10 6
Fluviicola_taffensis_DSM_16823 2 1
Owenweeksia_hongkongensis_DSM_17368 1 1
Gramella_forsetii_KT0803 16 1
Maribacter_sp._HTCC2170 3 2
Robiginitalea_biformata_HTCC2501 3 2
Aequorivita_sublithincola_DSM_14238 1 1
Zobellia_galactanivorans 3 2
Muricauda_ruestringensis_DSM_13258 8 4
Flavobacterium_indicum_GPTSA100-9 1 1
Fibrobacter_succinogenes_subsp._succinogenes_S85 15 2
Parachlamydia_acanthamoebae_UV-7 2 1
Isosphaera_pallida_ATCC_43644 7 3
Planctomyces_brasiliensis_DSM_5305 2 1
Rhodopirellula_baltica_SH_1 39 10
Pirellula_staleyi_DSM_6068 8 6
Coraliomargarita_akajimensis_DSM_45221 1 1
Opitutus_terrae_PB90-1 25 10
Turneriella_parva_DSM_21527 2 1
Leptospira_borgpetersenii_serovar_Hardjo-bovis_str._L550 1 1
Leptospira_interrogans_serovar_Lai_str._IPAV 11 5
Leptospira_biflexa_serovar_Patoc_strain_'Patoc_1_(Paris)' 1 1
Treponema_azotonutricium_ZAS-9 1 1
Denitrovibrio_acetiphilus_DSM_12809 4 2
Fervidobacterium_pennivorans_DSM_9078 1 1
Candidatus_Chloracidobacterium_thermophilum_B 1 1
Candidatus_Solibacter_usitatus_Ellin6076 97 13
Granulicella_tundricola_MP5ACTX9 10 3
Granulicella_mallensis_MP5ACTX8 8 4
Candidatus_Koribacter_versatilis_Ellin345 7 5
Terriglobus_saanensis_SP1PR4 2 2
Terriglobus_roseus_DSM_18391 3 1
Acidobacterium_capsulatum_ATCC_51196 5 2
Candidatus_Nitrospira_defluvii 9 2
Candidatus_Methylomirabilis_oxyfera 2 1
Bacteriovorax_marinus_SJ 2 2
Bdellovibrio_bacteriovorus_HD100 1 1
Arcobacter_sp._L 11 4
Arcobacter_nitrofigilis_DSM_7299 8 2
Arcobacter_butzleri_RM4018 4 1
Sulfurimonas_denitrificans_DSM_1251 1 1
Syntrophus_aciditrophicus_SB 1 1
Desulfomonile_tiedjei_DSM_6799 20 3
Desulfotalea_psychrophila_LSv54 1 1
Desulfatibacillum_alkenivorans_AK-01 21 5
Desulfococcus_oleovorans_Hxd3 2 2
Desulfovibrio_piezophilus 3 1
Desulfovibrio_aespoeensis_Aspo-2 2 1
Geobacter_daltonii_FRC-32 11 4
Geobacter_sp._M21 19 1
Geobacter_uraniireducens_Rf4 12 4
Geobacter_bemidjiensis_Bem 36 3
Geobacter_sulfurreducens_KN400 17 2
Geobacter_metallireducens_GS-15 6 1
Pelobacter_propionicus_DSM_2379 2 1
Stigmatella_aurantiaca_DW4/3-1 5 4
Corallococcus_coralloides_DSM_2259 6 4
Myxococcus_xanthus_DK_1622 9 6
Myxococcus_fulvus_HW-1 10 7
Azoarcus_sp._BH72 4 1
Aromatoleum_aromaticum_EbN1 2 1
Dechlorosoma_suillum_PS 4 1
Pseudogulbenkiania_sp._NH8B 1 1
Chromobacterium_violaceum_ATCC_12472 1 1
Candidatus_Accumulibacter_phosphatis_clade_IIA_str._UW-1 13 3
beta_proteobacterium_CB 1 1
Rubrivivax_gelatinosus_IL144 10 6
Leptothrix_cholodnii_SP-6 24 2
Cupriavidus_metallidurans_CH34 3 1
Cupriavidus_necator_N-1 2 1
Ralstonia_solanacearum_CFBP2957 9 2
Burkholderia_gladioli_BSR3 1 1
Burkholderia_glumae_BGR1 1 1
Alicycliphilus_denitrificans_K601 1 1
Ramlibacter_tataouinensis_TTB310 4 2
Delftia_sp._Cs1-4 9 5
Delftia_acidovorans_SPH-1 4 3
Variovorax_paradoxus_S110 11 1
Rhodoferax_ferrireducens_T118 2 2
Acidovorax_avenae_subsp._avenae_ATCC_19860 3 1
Comamonas_testosteroni_CNB-2 2 1
Collimonas_fungivorans_Ter331 10 1
Bordetella_parapertussis_12822 3 1
Bordetella_bronchiseptica_RB50 8 1
Achromobacter_xylosoxidans_A8 4 3
Nitrosomonas_sp._Is79A3 1 1
Sideroxydans_lithotrophicus_ES-1 4 1
Gallionella_capsiferriformans_ES-2 2 1
Methylotenera_versatilis_301 2 1
Magnetococcus_marinus_MC-1 61 6
Parvularcula_bermudensis_HTCC2503 2 1
Brevundimonas_subvibrioides_ATCC_15264 7 1
Caulobacter_sp._K31 3 1
Sphingopyxis_alaskensis_RB2256 1 1
Novosphingobium_aromaticivorans_DSM_12444 2 1
Sphingobium_japonicum_UT26S 8 2
Sphingobium_chlorophenolicum_L-1 9 3
Maricaulis_maris_MCS10 11 2
Hyphomonas_neptunium_ATCC_15444 1 1
Dinoroseobacter_shibae_DFL_12 1 1
Pseudovibrio_sp._FO-BEG1 2 2
Rhodobacter_sphaeroides_ATCC_17029 2 1
Rhodospirillum_photometricum_DSM_122 4 1
Tistrella_mobilis_KA081020-065 30 2
Magnetospirillum_magneticum_AMB-1 17 4
Rhodospirillum_centenum_SW 15 5
Azospirillum_lipoferum_4B 2 2
Azospirillum_sp._B510 1 1
Azospirillum_brasilense_Sp245 1 1
Micavibrio_aeruginosavorus_ARL-13 1 1
Candidatus_Puniceispirillum_marinum_IMCC1322 9 4
Methylobacterium_extorquens_AM1 47 3
Sinorhizobium_meliloti_AK83 4 2
Genome_sequence_of_Rhizobium_sp._strain_IRBG74 4 1
Rhizobium_etli_CIAT_652 4 2
Rhizobium_leguminosarum_bv._viciae_3841 6 3
Agrobacterium_tumefaciens_str._C58 1 1
Agrobacterium_sp._H13-3 4 1
Agrobacterium_vitis_S4 7 1
Hyphomicrobium_sp._MC1 1 1
Nitrobacter_hamburgensis_X14 2 1
Bradyrhizobium_japonicum_USDA_110 4 1
Saccharophagus_degradans_2-40 42 5
Teredinibacter_turnerae_T7901 20 5
Cellvibrio_japonicus_Ueda107 25 5
Oceanimonas_sp._GK1 2 1
Aliivibrio_salmonicida_LFI1238 11 1
Vibrio_fischeri_MJ11 10 1
Vibrio_sp._Ex25 6 3
Vibrio_parahaemolyticus_RIMD_2210633 2 2
Vibrio_furnissii_NCTC_11218 7 2
Vibrio_vulnificus_MO6-24/O 1 1
Vibrio_cholerae_O395 4 1
Psychromonas_ingrahamii_37 1 1
Ferrimonas_balearica_DSM_9799 2 2
Shewanella_piezotolerans_WP3 4 4
Shewanella_loihica_PV-4 6 3
Shewanella_halifaxensis_HAW-EB4 2 2
Shewanella_denitrificans_OS217 1 1
Shewanella_pealeana_ATCC_700345 2 2
Shewanella_oneidensis_MR-1 6 3
Shewanella_baltica_OS185 16 2
Shewanella_woodyi_ATCC_51908 11 7
Shewanella_amazonensis_SB2B 1 1
Shewanella_violacea_DSS12 1 1
Shewanella_frigidimarina_NCIMB_400 21 2
Shewanella_putrefaciens_CN-32 16 2
Colwellia_psychrerythraea_34H 17 2
Pseudoalteromonas_atlantica_T6c 1 1
Pseudoalteromonas_haloplanktis_TAC125 2 2
Glaciecola_sp._4H-3-7+YE-5 1 1
Marinobacter_adhaerens_HP15 1 1
Marinobacter_hydrocarbonoclasticus_ATCC_49840 1 1
Alteromonas_macleodii_str._'Deep_ecotype' 1 1
Kangiella_koreensis_DSM_16069 3 2
Hahella_chejuensis_KCTC_2396 26 8
Marinomonas_posidonica_IVIA-Po-181 4 2
Marinomonas_sp._MWYL1 16 2
Marinomonas_mediterranea_MMB-1 1 1
Methylomonas_methanica_MC09 3 3
Rhodanobacter_denitrificans 15 1
Xanthomonas_axonopodis_pv._citri_str._306 3 1
Xanthomonas_oryzae_pv._oryzae_PXO99A 5 1
Xanthomonas_campestris_pv._campestris_str._B100 9 1
Allochromatium_vinosum_DSM_180 3 1
Thiocystis_violascens_DSM_198 2 1
Nitrosococcus_watsonii_C-113 1 1
gamma_proteobacterium_HdN1 1 1
Candidatus_Ruthia_magnifica_str._Cm_(Calyptogena_magnifica) 1 1
Dickeya_dadantii_Ech703 2 1
Dickeya_zeae_Ech1591 8 2
Pectobacterium_wasabiae_WPP163 16 3
Pectobacterium_sp._SCC3193 16 3
Pectobacterium_atrosepticum_SCRI1043 2 1
Pectobacterium_carotovorum_subsp._carotovorum_PC1 14 2
Pantoea_sp._At-9b 2 1
Cronobacter_turicensis_z3032 2 1
Pseudomonas_sp._UW4 4 2
Pseudomonas_brassicacearum_subsp._brassicacearum_NFM421 2 1
Pseudomonas_syringae_pv._tomato_str._DC3000 1 1
Pseudomonas_protegens_Pf-5 4 1
Pseudomonas_sp._VLB120 6 1
Psychrobacter_sp._PRwf-1 1 1
Acinetobacter_baumannii_ATCC_17978 2 1
Methylophaga_sp._JAM1 4 1
Thioalkalimicrobium_cyclicum_ALM1 1 1
Cenarchaeum_symbiosum_A 1 1
Candidatus_Nitrosopumilus_sp._AR2 1 1
Nitrosopumilus_maritimus_SCM1 2 2
Candidatus_Korarchaeum_cryptofilum_OPF8 1 1
Methanocella_arvoryzae_MRE50 6 1
Methanococcoides_burtonii_DSM_6242 2 2
Methanosarcina_acetivorans_C2A 2 2
Methanosarcina_mazei_Go1 1 1
Methanosarcina_barkeri_str._Fusaro 2 2
Thermoplasmatales_archaeon_BRNA1 2 2
Haloquadratum_walsbyi_DSM_16790 1 1
Haloferax_volcanii_DS2 1 1

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Strains
Genome     Number   Proteins
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   892 118
Drosophila_melanogaster_FlyBase_5.12_(FlyBase)   (Fruit fly)   499 38
Anopheles_gambiae_VectorBase_AgamP3.6__(VectorBase)   (African malaria mosquito)   300 41
Ascaris_suum_Victoria/Ghent_   (Pig roundworm)   124 29
Caenorhabditis_elegans_WormBase_WS218__(WormBase)   (Roundworm)   155 20
Cryptococcus_neoformans_var._grubii_H99_ 3 1
Cryptococcus_neoformans_B-3501A_ 3 1
Cryptococcus_neoformans_JEC21_ 3 1
Aspergillus_fumigatus_A1163_ 3 1
Candida_albicans_WO-1_ 4 1
Saccharomyces_cerevisiae_UC5 3 1
Saccharomyces_cerevisiae_PW5 3 1
Saccharomyces_cerevisiae_CLIB324 3 1
Saccharomyces_cerevisiae_CBS7960 3 1
Saccharomyces_cerevisiae_T7 3 1
Saccharomyces_cerevisiae_FostersB 3 1
Saccharomyces_cerevisiae_FostersO 2 1
Saccharomyces_cerevisiae_VL3 2 1
Saccharomyces_cerevisiae_Vin13 3 1
Saccharomyces_cerevisiae_LalvinQA23 3 1
Saccharomyces_cerevisiae_Sigma1278b 3 1
Saccharomyces_cerevisiae_W303 3 1
Saccharomyces_cerevisiae_JAY291 3 1
Saccharomyces_cerevisiae_AWRI1631 3 1
Saccharomyces_cerevisiae_YPS163 3 1
Saccharomyces_cerevisiae_T73 3 1
Saccharomyces_cerevisiae_Y10 3 1
Saccharomyces_cerevisiae_YJM789_ 3 1
Saccharomyces_cerevisiae_YJM789 3 1
Saccharomyces_cerevisiae_RM11-1a 3 1
Saccharomyces_cerevisiae_RM11-1a_ 3 1
Saccharomyces_cerevisiae_SGD_(SGD)   (Baker's yeast)   3 1
Synechocystis_sp._PCC_6803_substr._PCC-P 10 1
Synechocystis_sp._PCC_6803_substr._PCC-N 10 1
Synechocystis_sp._PCC_6803_substr._GT-I 10 1
Synechocystis_sp._PCC_6803 10 1
Dactylococcopsis_salina_PCC_8305 67 20
Prochlorococcus_marinus_str._AS9601 4 1
Oscillatoria_nigro-viridis_PCC_7112 38 9
Oscillatoria_acuminata_PCC_6304 5 4
Arthrospira_platensis_NIES-39 1 1
Cyanothece_sp._PCC_7822 58 11
Cyanothece_sp._ATCC_51142 3 1
Gloeobacter_kilaueensis_Gloeobacter_sp._JS 1 1
Calothrix_parietina_Calothrix_sp._PCC_6303 1 1
Cylindrospermum_stagnale_PCC_7417 16 4
Anabaena_cylindrica_PCC_7122 28 8
Frankia_sp._EuI1c 1 1
Streptomyces_rapamycinicus_NRRL_5491 1 1
Streptomyces_collinus_Tu_365 2 2
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 3 3
Streptomyces_hygroscopicus_subsp._jinggangensis_TL01 2 2
Saccharothrix_espanaensis_DSM_44229 5 5
Amycolatopsis_mediterranei_RB 3 3
Amycolatopsis_mediterranei_S699 3 3
Amycolatopsis_mediterranei_S699 3 3
Actinoplanes_friuliensis_DSM_7358 1 1
Rhodococcus_erythropolis_CCM2595 2 2
Mycobacterium_gilvum_Spyr1 1 1
Corynebacterium_callunae_DSM_20147 1 1
Corynebacterium_glutamicum_SCgG2 3 2
Corynebacterium_glutamicum_SCgG1 3 2
Corynebacterium_glutamicum_ATCC_13032 1 1
Corynebacterium_glutamicum_ATCC_13032 1 1
Corynebacterium_glutamicum_ATCC_13032 1 1
Corynebacterium_diphtheriae_BH8 1 1
Corynebacterium_diphtheriae_INCA_402 1 1
Corynebacterium_diphtheriae_VA01 1 1
Corynebacterium_diphtheriae_HC04 1 1
Corynebacterium_diphtheriae_HC03 1 1
Corynebacterium_diphtheriae_HC02 1 1
Corynebacterium_diphtheriae_HC01 1 1
Corynebacterium_diphtheriae_241 1 1
Corynebacterium_diphtheriae_CDCE_8392 1 1
Corynebacterium_diphtheriae_C7_(beta) 1 1
Corynebacterium_diphtheriae_31A 1 1
Tropheryma_whipplei_str._Twist 5 3
Leifsonia_xyli_subsp._cynodontis_DSM_46306 1 1
Deinococcus_peraridilitoris_DSM_19664 1 1
[Clostridium]_stercorarium_Clostridiu_subsp._stercorarium_DSM_8532 1 1
Desulfitobacterium_dichloroeliminans_LMG_P-21439 1 1
Desulfotomaculum_gibsoniae_DSM_7213 1 1
Clostridium_autoethanogenum_DSM_10061 2 1
Lactobacillus_reuteri_JCM_1112 1 1
Lactobacillus_acidophilus_NCFM 4 1
Streptococcus_agalactiae_09mas018883 2 1
Paenibacillus_sp._Y412MC10 2 2
Paenibacillus_mucilaginosus_KNP414 2 2
Paenibacillus_mucilaginosus_K02 3 3
Paenibacillus_polymyxa_SC2 1 1
Bacillus_infantis_NRRL_B-14911 2 1
Bacillus_megaterium_WSH-002 19 1
Staphylococcus_aureus_subsp._aureus_MSHR1132 2 1
Staphylococcus_pasteuri_SP1 2 1
Staphylococcus_lugdunensis_N920143 12 1
Staphylococcus_warneri_SG1 2 1
Staphylococcus_aureus_CA-347 2 1
Staphylococcus_aureus_Bmb9393 2 1
Staphylococcus_aureus_M1 2 1
Staphylococcus_aureus_08BA02176 2 1
Staphylococcus_aureus_ST228/18412 2 1
Staphylococcus_aureus_ST228/18341 2 1
Staphylococcus_aureus_ST228/16125 2 1
Staphylococcus_aureus_ST228/16035 2 1
Staphylococcus_aureus_ST228/15532 2 1
Staphylococcus_aureus_ST228/10497 2 1
Staphylococcus_aureus_ST228/10388 2 1
Staphylococcus_aureus_04-02981 2 1
Staphylococcus_aureus_subsp._aureus_Z172 2 1
Staphylococcus_aureus_subsp._aureus_6850 2 1
Staphylococcus_aureus_subsp._aureus_SA957 2 1
Staphylococcus_aureus_subsp._aureus_CN1 2 1
Staphylococcus_aureus_subsp._aureus_SA40 2 1
Staphylococcus_aureus_subsp._aureus_11819-97 2 1
Staphylococcus_aureus_subsp._aureus_M013 2 1
Staphylococcus_aureus_subsp._aureus_VC40 2 1
Staphylococcus_aureus_subsp._aureus_T0131 2 1
Staphylococcus_aureus_subsp._aureus_LGA251 2 1
Staphylococcus_aureus_subsp._aureus_ECT-R_2 2 1
Staphylococcus_aureus_subsp._aureus_JKD6159 2 1
Staphylococcus_aureus_subsp._aureus_ED133 2 1
Staphylococcus_aureus_subsp._aureus_ED98 2 1
Staphylococcus_aureus_subsp._aureus_TW20 2 1
Staphylococcus_aureus_subsp._aureus_55/2053 2 1
Staphylococcus_aureus_subsp._aureus_TCH60 2 1
Staphylococcus_aureus_subsp._aureus_str._JKD6008 2 1
Staphylococcus_aureus_subsp._aureus_71193 2 1
Staphylococcus_aureus_subsp._aureus_S0385 2 1
Staphylococcus_aureus_subsp._aureus_str._Newman 2 1
Staphylococcus_aureus_subsp._aureus_Mu3 2 1
Staphylococcus_aureus_subsp._aureus_USA300_TCH1516 2 1
Staphylococcus_aureus_subsp._aureus_USA300_FPR3757 2 1
Staphylococcus_aureus_subsp._aureus_JH9 2 1
Staphylococcus_aureus_subsp._aureus_MSSA476 2 1
Staphylococcus_aureus_subsp._aureus_MRSA252 2 1
Staphylococcus_aureus_subsp._aureus_MW2 2 1
Staphylococcus_aureus_subsp._aureus_N315 2 1
Staphylococcus_aureus_subsp._aureus_Mu50 2 1
Staphylococcus_aureus_subsp._aureus_COL 2 1
Staphylococcus_aureus_subsp._aureus_NCTC_8325 2 1
Salinibacter_ruber_DSM_13855 1 1
Rhodothermus_marinus_SG0.5JP17-172 3 2
Emticicia_oligotrophica_DSM_17448 4 4
Bacteroides_fragilis_638R 1 1
Bacteroides_fragilis_NCTC_9343 1 1
Fibrobacter_succinogenes_subsp._succinogenes_S85 15 2
Chlamydia_trachomatis_J/6276tet1 2 1
Chlamydia_trachomatis_RC-J(s)/122 2 1
Chlamydia_trachomatis_RC-F(s)/342 2 1
Chlamydia_trachomatis_RC-Fs852 2 1
Singulisphaera_acidiphila_DSM_18658 7 5
Leptospira_borgpetersenii_serovar_Hardjo-bovis_str._JB197 1 1
Leptospira_interrogans_serovar_Lai_str._56601 11 5
Leptospira_interrogans_serovar_Copenhageni_str._Fiocruz_L1-130 9 4
Leptospira_biflexa_serovar_Patoc_strain_'Patoc_1_(Ames)' 1 1
Bdellovibrio_bacteriovorus_str._Tiberius 1 1
Arcobacter_butzleri_ED-1 4 1
Desulfocapsa_sulfexigens_DSM_10523 3 2
Desulfobacula_toluolica_Tol2 2 1
Geobacter_sp._M18 6 4
Geobacter_sulfurreducens_PCA 17 2
Anaeromyxobacter_sp._K 1 1
Myxococcus_stipitatus_DSM_14675 9 5
Ralstonia_pickettii_12J 8 1
Ralstonia_solanacearum_FQY_4 8 1
Ralstonia_solanacearum_Po82 10 3
Ralstonia_solanacearum_PSI07 10 2
Ralstonia_solanacearum_CMR15 8 1
Ralstonia_solanacearum_GMI1000 8 1
Burkholderia_sp._CCGE1003 1 1
Burkholderia_sp._KJ006 1 1
Candidatus_Symbiobacter_mobilis_Comamonadaceae_bacterium_CR 13 1
Alicycliphilus_denitrificans_BC 1 1
Variovorax_paradoxus_B4 11 1
Bordetella_parapertussis_Bpp5 2 1
Bordetella_bronchiseptica_MO149 6 1
Bordetella_bronchiseptica_253 7 1
Phaeobacter_gallaeciensis_DSM_26640 5 1
Rhodobacter_sphaeroides_KD131 2 1
Rhodobacter_sphaeroides_ATCC_17025 1 1
Magnetospirillum_gryphiswaldense_MSR-1_v2 16 11
Rhizobium_etli_CFN_42 2 1
Rhizobium_etli_bv._mimosae_str._Mim1 2 1
Rhizobium_leguminosarum_bv._trifolii_WSM2304 8 3
Rhizobium_leguminosarum_bv._trifolii_WSM1325 6 3
Rhodopseudomonas_palustris_HaA2 3 3
Bradyrhizobium_oligotrophicum_S58 15 2
Bradyrhizobium_japonicum_USDA_6 1 1
Simiduia_agarivorans_SA1_=_DSM_21679 2 2
Vibrio_fischeri_ES114 7 1
Vibrio_sp._EJY3 6 1
Vibrio_alginolyticus_NBRC_15630_=_ATCC_17749 4 2
Vibrio_nigripulchritudo_VibrioScope 2 2
Vibrio_cholerae_M66-2 7 1
Vibrio_cholerae_O395 4 1
Vibrio_cholerae_O1_str._2010EL-1786 3 1
Vibrio_cholerae_MJ-1236 3 1
Shewanella_sp._W3-18-1 7 2
Shewanella_sp._ANA-3 14 1
Shewanella_baltica_BA175 2 1
Shewanella_baltica_OS678 13 2
Shewanella_baltica_OS117 2 1
Shewanella_baltica_OS223 1 1
Shewanella_baltica_OS195 16 2
Shewanella_baltica_OS155 2 1
Shewanella_putrefaciens_200 14 2
Glaciecola_psychrophila_170 5 4
Alteromonas_macleodii_str._'Ionian_Sea_UM4b' 1 1
Alteromonas_macleodii_str._'Ionian_Sea_UM7' 1 1
Alteromonas_macleodii_str._'English_Channel_615' 1 1
Alteromonas_macleodii_AltDE1 1 1
Alteromonas_macleodii_str._'Black_Sea_11' 1 1
Alteromonas_macleodii_ATCC_27126 1 1
Thalassolituus_oleivorans_MIL-1 15 2
Stenotrophomonas_maltophilia_JV3 10 1
Xanthomonas_citri_subsp._citri_Aw12879 3 1
Xanthomonas_campestris_pv._vesicatoria_str._85-10 5 1
Xanthomonas_axonopodis_pv._citrumelo_F1 5 1
Xanthomonas_axonopodis_Xac29-1 3 1
Xanthomonas_oryzae_pv._oryzae_MAFF_311018 5 1
Xanthomonas_oryzae_pv._oryzae_KACC_10331 4 1
Xanthomonas_campestris_pv._raphani_756C 9 1
Xanthomonas_campestris_pv._campestris_str._8004 9 1
Xanthomonas_campestris_pv._campestris_str._ATCC_33913 9 1
Dickeya_dadantii_Ech586 3 1
Dickeya_dadantii_3937 2 1
Pectobacterium_carotovorum_subsp._carotovorum_PCC21 2 1
Cronobacter_sakazakii_CMCC_45402 2 1
Cronobacter_sakazakii_SP291 2 1
Cronobacter_sakazakii_ATCC_BAA-894 2 1
Pseudomonas_denitrificans_ATCC_13867 3 1
Pseudomonas_syringae_pv._phaseolicola_1448A 1 1
Pseudomonas_syringae_pv._syringae_B728a 1 1
Pseudomonas_protegens_CHA0 4 1
Pseudomonas_fluorescens_F113 2 1
Pseudomonas_resinovorans_NBRC_106553 1 1
Pseudomonas_mendocina_NK-01 7 1
Acinetobacter_baumannii__ATCC_19606 2 1
Methylophaga_sp._JAM7 4 1
Candidatus_Nitrososphaera_gargensis_Ga9.2 1 1
Candidatus_Nitrosoarchaeum_koreensis_Candidatus_Nitrosopumilus_koreensis_AR1 2 2
Methanomethylovorans_hollandica_DSM_15978 9 6
Methanolobus_psychrophilus_R15 11 3
Methanosarcina_mazei_Tuc01 1 1
Candidatus_Methanomassiliicoccus_intestinalis_Issoire-Mx1 1 1
Haloquadratum_walsbyi_C23 1 1
Natronomonas_moolapensis_8.8.11 9 2

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Longest transcript per gene
Genome     Number   Proteins
Homo_sapiens_69_37   (Human)   816 116
Pan_troglodytes_69_2.1.4   (Chimpanzee)   642 87
Gorilla_gorilla_69_3.1   (Western gorilla)   548 74
Pongo_abelii_69_2   (Sumatran orangutan)   503 74
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   559 76
Macaca_mulatta_69_1   (Rhesus monkey)   518 76
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   555 74
Otolemur_garnettii_69_3   (Small-eared galago)   593 83
Microcebus_murinus_69_1   (Gray mouse lemur)   448 68
Rattus_norvegicus_69_3.4   (Norway rat)   782 101
Mus_musculus_69_38   (House mouse)   633 91
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   418 67
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   584 91
Cavia_porcellus_69_3   (Domestic guinea pig)   527 74
Oryctolagus_cuniculus_69_2   (Rabbit)   547 75
Ochotona_princeps_69   (American pika)   440 70
Tupaia_belangeri_69   (Northern tree shrew)   409 62
Sus_scrofa_69_10.2   (Pig)   595 94
Bos_taurus_69_3.1   (Cattle)   642 90
Vicugna_pacos_69_1   (Alpaca)   348 60
Tursiops_truncatus_69_1   (Bottlenose dolphin)   508 74
Mustela_putorius_furo_69_1.0   (Domestic ferret)   544 71
Ailuropoda_melanoleuca_69_1   (Giant panda)   621 85
Canis_familiaris_69_3.1   (Dog)   550 72
Felis_catus_69   (Domestic cat)   398 69
Equus_caballus_69_2   (Horse)   571 78
Myotis_lucifugus_69_2.0   (Little brown bat)   627 84
Pteropus_vampyrus_69_1   (Large flying fox)   523 77
Sorex_araneus_69_1   (European shrew)   374 62
Erinaceus_europaeus_69   (Western European hedgehog)   428 68
Procavia_capensis_69_1   (Cape rock hyrax)   483 75
Loxodonta_africana_69_3   (African savanna elephant)   474 69
Echinops_telfairi_69   (Small Madagascar hedgehog)   402 65
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   341 60
Choloepus_hoffmanni_69_1   (Hoffmann's two-fingered sloth)   297 54
Macropus_eugenii_69_1.0   (Tammar wallaby)   418 70
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   605 82
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   587 81
Ornithorhynchus_anatinus_69_5   (Platypus)   507 108
Petromyzon_marinus_69_7.0   (Sea lamprey)   183 34
Meleagris_gallopavo_69_2   (Turkey)   506 63
Gallus_gallus_69_2   (Chicken)   511 65
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   480 64
Pelodiscus_sinensis_69_1.0   (Chinese soft-shelled turtle)   508 75
Anolis_carolinensis_69_2.0   (Green anole)   879 133
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   605 84
Latimeria_chalumnae_69_1   (Coelacanth)   629 84
Gadus_morhua_69_1   (Atlantic cod)   728 98
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   715 99
Takifugu_rubripes_69_4   (Torafugu)   902 115
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   736 91
Oryzias_latipes_69_1   (Japanese medaka)   692 86
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   722 105
Oreochromis_niloticus_69_1.0   (Nile tilapia)   847 106
Danio_rerio_69_9   (Zebrafish)   1300 196
Ciona_savignyi_69_2.0   (Pacific transparent sea squirt)   112 12
Ciona_intestinalis_69   (Vase tunicate)   116 18
Drosophila_melanogaster_69_5   (Fruit fly)   215 18
Caenorhabditis_elegans_69_215   (Roundworm)   135 16
Saccharomyces_cerevisiae_69_4   (Baker's yeast)   3 1

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Others
Genome     Number   Proteins
Homo_sapiens_75_37_(old_version_GRC)   (Human)   2051 355
Homo_sapiens__(NCBI_version)   (Human)   1556 235
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   627 89
Heliconius_numata__(Incomplete) 2 2
Loa_loa_v3.3_(Request)   (Eye worm)   123 22
Wuchereria_bancrofti_v1.0_(Request)   (Agent of lymphatic filariasis)   113 44
Brugia_malayi_v1.0_(Duplicate)   (Agent of lymphatic filariasis)   101 15
Ricinus_communis__(Early_assembly)   (Castor bean)   7 4
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   1 1
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   1 1
NCBI_plasmid_sequences_(Plasmids) 261 57
TargetDB__(Targets) 253 77
Protein_Data_Bank_(all_PDB_sequenc) 731 295
Protozoadb_2010_08_(Protozoadb) 2 2
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 963 961
NCBI_viral_sequences_(Viral) 2 2
STRING_v9.0.5_(STRING) 22301 3338
Uniprot_2018_03_genome 232798 44369
NCBI_2017_08_genome 396556 68391
PDB_chains_(SCOP_1.75)_(PDB) 29 14

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