SUPERFAMILY 1.75 HMM library and genome assignments server

Domain combinations for RmlC-like cupins superfamily in groups of genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a RmlC-like cupins domain in that genome.

Complete genomes
Genome     Number   Proteins
Homo_sapiens_71_37   (Human)   35 34
Pan_troglodytes_71_2.1.4   (Chimpanzee)   8 8
Gorilla_gorilla_71_3.1   (Western gorilla)   7 7
Pongo_abelii_71_2   (Sumatran orangutan)   10 9
Nomascus_leucogenys_71_1.0   (Northern white-cheeked gibbon)   10 8
Macaca_mulatta_71_1   (Rhesus monkey)   14 12
Callithrix_jacchus_71_3.2.1   (White-tufted-ear marmoset)   13 12
Otolemur_garnettii_71_3   (Small-eared galago)   12 10
Microcebus_murinus_71_1   (Gray mouse lemur)   11 8
Tarsius_syrichta_71_1   (Philippine tarsier)   4 4
Rattus_norvegicus_71_5.0   (Norway rat)   10 9
Mus_musculus_71_38   (House mouse)   13 12
Ictidomys_tridecemlineatus_71_2   (Thirteen-lined ground squirrel)   10 9
Dipodomys_ordii_71_1   (Ord's kangaroo rat)   8 7
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   10 9
Cavia_porcellus_71_3   (Domestic guinea pig)   10 9
Oryctolagus_cuniculus_71_2   (Rabbit)   12 11
Ochotona_princeps_71   (American pika)   8 7
Tupaia_belangeri_71   (Northern tree shrew)   5 5
Sus_scrofa_71_10.2   (Pig)   10 10
Bos_taurus_71_3.1   (Cattle)   12 11
Vicugna_pacos_71_1   (Alpaca)   7 7
Tursiops_truncatus_71_1   (Bottlenosed dolphin)   10 9
Mustela_putorius_furo_71_1.0   (Domestic ferret)   10 9
Ailuropoda_melanoleuca_71_1   (Giant panda)   10 9
Canis_familiaris_71_3.1   (Dog)   12 11
Felis_catus_71_6.2   (Domestic cat)   10 9
Equus_caballus_71_2   (Horse)   9 8
Myotis_lucifugus_71_2.0   (Little brown bat)   9 8
Pteropus_vampyrus_71_1   (Large flying fox)   9 8
Sorex_araneus_71_1   (European shrew)   6 6
Erinaceus_europaeus_71   (Western European hedgehog)   6 5
Procavia_capensis_71_1   (Cape rock hyrax)   10 7
Loxodonta_africana_71_3   (African savanna elephant)   11 10
Echinops_telfairi_71   (Small Madagascar hedgehog)   6 6
Dasypus_novemcinctus_71_2   (Nine-banded armadillo)   8 7
Choloepus_hoffmanni_71_1   (Hoffmann's two-fingered sloth)   5 4
Macropus_eugenii_71_1.0   (Tammar wallaby)   8 5
Sarcophilus_harrisii_71_7.0   (Tasmanian devil)   9 8
Monodelphis_domestica_71_5   (Gray short-tailed opossum)   10 9
Ornithorhynchus_anatinus_71_5   (Platypus)   10 10
Saccoglossus_kowalevskii_v3.0 32 29
Petromyzon_marinus_71_7.0   (Sea lamprey)   6 5
Latimeria_chalumnae_71_1   (Coelacanth)   10 9
Anolis_carolinensis_71_2.0   (Green anole)   11 10
Taeniopygia_guttata_71_3.2.4   (Zebra finch)   7 6
Meleagris_gallopavo_71_2   (Turkey)   9 8
Gallus_gallus_71_4   (Chicken)   8 7
Pelodiscus_sinensis_71_1.0   (Chinese soft-shelled turtle)   10 9
Xenopus_laevis_   (African clawed frog)   28 25
Xenopus_tropicalis_71_4.2   (Western clawed frog)   14 12
Danio_rerio_71_9   (Zebrafish)   16 15
Gadus_morhua_71_1   (Atlantic cod)   9 8
Gasterosteus_aculeatus_71_1   (Three-spined stickleback)   14 13
Oryzias_latipes_71_1   (Japanese medaka)   7 7
Xiphophorus_maculatus_71_4.4.2   (Southern platyfish)   10 9
Tetraodon_nigroviridis_71_8   (Spotted green pufferfish)   12 11
Takifugu_rubripes_71_4   (Torafugu)   12 11
Oreochromis_niloticus_71_1.0   (Nile tilapia)   10 9
Branchiostoma_floridae_1.0   (Florida lancelet)   40 34
Oikopleura_dioica 8 8
Ciona_savignyi_71_2.0   (Pacific transparent sea squirt)   8 8
Ciona_intestinalis_71   (Vase tunicate)   8 7
Strongylocentrotus_purpuratus_v3.1   (Purple sea urchin)   14 11
Lottia_gigantea_ 14 13
Helobdella_robusta_ 10 10
Capitella_sp._I_ 21 20
Danaus_plexippus_OGS1.0   (Monarch butterfly)   6 6
Heliconius_melpomene_ 9 9
Heliconius_numata_ 5 5
Bombyx_mori_   (Domestic silkworm)   9 9
Nasonia_vitripennis_   (Jewel wasp)   5 5
Apis_mellifera_38.2d_(Not_maintained)   (Honey bee)   9 9
Harpegnathos_saltator_v3.3   (Jerdon's jumping ant)   5 5
Linepithema_humile_v1.1   (Argentine ant)   5 5
Solenopsis_invicta_v.2.2.3   (Red fire ant)   6 6
Pogonomyrmex_barbatus_v1.2   (Red harvester ant)   6 6
Acromyrmex_echinatior_v3.8   (Panamanian leafcutter ant)   5 5
Atta_cephalotes_v1.1 9 8
Camponotus_floridanus_v3.3   (Florida carpenter ant)   5 5
Drosophila_grimshawi_1.3 6 6
Drosophila_willistoni_1.3 5 5
Drosophila_pseudoobscura_2.13 5 5
Drosophila_persimilis_1.3 7 7
Drosophila_yakuba_1.3 5 5
Drosophila_simulans_1.3 5 5
Drosophila_sechellia_1.3 5 5
Drosophila_melanogaster_71_5   (Fruit fly)   8 8
Drosophila_erecta_1.3 5 5
Drosophila_ananassae_1.3 6 6
Drosophila_virilis_1.2 5 5
Drosophila_mojavensis_1.3 6 6
Aedes_aegypti_55_(Not_maintained)   (Yellow fever mosquito)   8 8
Culex_pipiens_quinquefasciatus_   (Southern house mosquito)   8 8
Anopheles_gambiae_49_3j   (African malaria mosquito)   6 6
Tribolium_castaneum_3.0   (Red flour beetle)   7 7
Pediculus_humanus_corporis__(Early_assembly)   (Human body louse)   6 6
Acyrthosiphon_pisum_   (Pea aphid)   4 4
Daphnia_pulex_   (Common water flea)   9 8
Tetranychus_urticae_   (Two-spotted spider mite)   8 8
Ixodes_scapularis__(Preliminary)   (Black-legged tick)   19 18
Pristionchus_pacificus_ 16 16
Meloidogyne_incognita_   (Southern root-knot nematode)   12 12
Meloidogyne_hapla_ 10 10
Brugia_malayi_WS218   (Agent of lymphatic filariasis)   4 4
Caenorhabditis_japonica_ 25 25
Caenorhabditis_brenneri_ 13 13
Caenorhabditis_remanei_ 15 15
Caenorhabditis_elegans_71_235   (Nematode)   15 15
Caenorhabditis_briggsae_2 10 10
Hymenolepis_microstoma_ 3 3
Echinococcus_multilocularis_ 4 4
Echinococcus_granulosus_ 4 4
Taenia_solium_   (Pork tapeworm)   6 6
Schistosoma_mansoni_ 4 4
Acropora_digitifera_v1.0 16 16
Nematostella_vectensis_1.0   (Starlet sea anemone)   18 17
Hydra_magnipapillata_ 14 14
Amphimedon_queenslandica 26 24
Trichoplax_adhaerens_ 10 10
Proterospongia_sp._ATCC_50818_ 12 11
Monosiga_brevicollis_ 10 10
Sphaeroforma_arctica_JP610_ 30 29
Capsaspora_owczarzaki_ATCC_30864_ 15 15
Malassezia_globosa_CBS_7966_ 4 4
Ustilago_maydis_ 10 10
Wallemia_sebi_v1.0 8 8
Mixia_osmundae_IAM_14324_v1.0 7 7
Cronartium_quercuum_f._sp._fusiforme_G11_v1.0 7 7
Puccinia_graminis_f._sp._tritici_CRL_75-36-700-3_ 5 5
Melampsora_laricis-populina_ 7 7
Rhodotorula_graminis_WP1_v1.0 12 12
Sporobolomyces_roseus_IAM_13481_ 9 9
Sphaerobolus_stellatus_v1.0 41 40
Piloderma_croceum_F_1598_v1.0 16 16
Serpula_lacrymans_var._lacrymans_S7.9_ 14 14
Coniophora_puteana 13 13
Hydnomerulius_pinastri_v2.0 17 17
Paxillus_rubicundulus_Ve08.2h10_v1.0 11 11
Pisolithus_microcarpus_441_v1.0 12 12
Pisolithus_tinctorius_Marx_270_v1.0 10 10
Scleroderma_citrinum_Foug_A_v1.0 9 9
Coprinopsis_cinerea_okayama7_130_v3 11 11
Pleurotus_ostreatus_   (Oyster mushroom)   16 16
Amanita_thiersii_Skay4041_v1.0 11 11
Amanita_muscaria_Koide_v1.0   (Fly agaric)   13 13
Galerina_marginata_v1.0 18 18
Hebeloma_cylindrosporum_h7_v2.0 11 11
Laccaria_bicolor_S238N-H82_ 22 22
Agaricus_bisporus_var._bisporus_ 11 11
Schizophyllum_commune_ 16 16
Stereum_hirsutum_FP-91666_SS1__v1.0 21 21
Heterobasidion_annosum_ 14 14
Gloeophyllum_trabeumv1.0 24 24
Punctularia_strigosozonata_v1.0 19 19
Phanerochaete_chrysosporium_RP-78_2.1 24 24
Sebacina_vermifera_MAFF_305830_v1.0 12 12
Fomitiporia_mediterranea_v1.0 16 16
Tulasnella_calospora_AL13/4D_v1.0 18 17
Postia_placenta_ 34 34
Wolfiporia_cocos_MD-104_SS10__v1.0 18 18
Fomitopsis_pinicolav1.0 19 19
Fomitopsis_pinicola_FP-58527_SS1_v3.0 20 20
Trametes_versicolor_v1.0 24 24
Dichomitus_squalens 20 20
Tremella_mesenterica_ 13 12
Daldinia_eschscholzii_EC12_v1.0 36 35
Magnaporthe_grisea_70-15_ 22 22
Apiospora_montagnei_NRRL_25634_v1.0 38 38
Podospora_anserina_ 22 22
Sporotrichum_thermophile_ATCC_42464_ 21 21
Thielavia_terrestris_NRRL_8126_ 21 21
Chaetomium_globosum_CBS_148.51_ 19 19
Neurospora_tetrasperma_ 16 16
Neurospora_discreta_FGSC_8579_ 15 15
Neurospora_crassa_OR74A_ 16 16
Cryphonectria_parasitica_   (Chestnut blight fungus)   30 30
Verticillium_dahliae_VdLs.17_ 30 30
Verticillium_albo-atrum_VaMs.102_ 30 30
Acremonium_alcalophilumv_1.0 165 165
Fusarium_oxysporum_f._sp._lycopersici_4286_ 65 64
Nectria_haematococca_mpVI_ 69 67
Fusarium_verticillioides_7600_ 66 63
Fusarium_graminearum_ 46 46
Trichoderma_asperellum_CBS_433.97_v1.0 35 35
Trichoderma_atroviride_ 30 29
Trichoderma_citrinoviride_v1.0 26 26
Trichoderma_reesei_1.2 27 27
Trichoderma_longibrachiatum_ATCC_18648_v1.0 27 27
Trichoderma_virens_Gv29-8_ 35 35
Trichoderma_harzianum_CBS_226.95_v1.0 44 44
Amorphotheca_resinae_v1.0   (Creosote fungus)   26 26
Botrytis_cinerea_B05.10_ 25 25
Sclerotinia_sclerotiorum_ 24 24
Didymella_exigua_CBS_183.55_v1.0 31 30
Alternaria_brassicicola_ 23 23
Setosphaeria_turcica_v1.0 33 32
Pyrenophora_tritici-repentis_ 29 29
Cochliobolus_miyabeanus_ATCC_44560_v1.0 37 37
Cochliobolus_victoriae_FI3_v1.0 35 35
Cochliobolus_lunatus_m118_v2.0 33 33
Cochliobolus_carbonum_26-R-13_v1.0 33 33
Cochliobolus_heterostrophus_ 34 34
Stagonospora_nodorum_ 33 32
Mycosphaerella_graminicola_IPO323_ 29 29
Zasmidium_cellare_ATCC_36951_v1.0 68 67
Mycosphaerella_fijiensis_CIRAD86_ 29 29
Septoria_musiva_v1.0 30 30
Dothistroma_septosporum 38 37
Aureobasidium_pullulans_var._subglaciale_EXF-2481_v1.0 29 29
Ajellomyces_dermatitidis_SLH14081_ 13 13
Histoplasma_capsulatum_class_NAmI_strain_WU24_ 14 14
Microsporum_canis_CBS_113480_ 11 11
Microsporum_gypseum_ 12 12
Arthroderma_benhamiae_CBS_112371_ 12 11
Trichophyton_equinum_CBS_127.97_ 12 12
Trichophyton_verrucosum_HKI_0517_ 12 11
Trichophyton_tonsurans_CBS_112818_ 12 12
Trichophyton_rubrum_CBS_118892_ 12 12
Paracoccidioides_brasiliensis_Pb18_ 11 11
Coccidioides_posadasii_RMSCC_3488_ 14 14
Coccidioides_immitis_RS_ 14 14
Uncinocarpus_reesii_1704_ 11 11
Neosartorya_fischeri_NRRL_181_ 33 33
Penicillium_chrysogenum_Wisconsin_54-1255_ 40 40
Penicillium_chrysogenum_v1.0 40 40
Penicillium_marneffei_ATCC_18224_ 32 32
Aspergillus_acidus_v1.0 38 38
Aspergillus_fumigatus_Af293 27 27
Aspergillus_brasiliensis_v1.0 38 38
Aspergillus_sydowii_v1.0 51 50
Aspergillus_versicolor_v1.0 52 52
Aspergillus_zonatus_v1.0 25 25
Aspergillus_carbonarius_ITEM_5010_ 30 30
Aspergillus_terreus_NIH2624_ 30 30
Aspergillus_tubingensis_v1.0 40 40
Aspergillus_wentii_v1.0 39 39
Aspergillus_oryzae_RIB40_ 41 41
Aspergillus_niger_ATCC_1015_ 30 30
Aspergillus_flavus_NRRL3357_ 48 47
Aspergillus_clavatus_NRRL_1_ 24 24
Aspergillus_glaucus_v1.0 37 36
Aspergillus_nidulans_FGSC_A4_ 33 33
Tuber_melanosporum_Vittad_   (Perigord truffle)   11 11
Pichia_membranifaciensv1.0 9 9
Babjeviella_inositovora_NRRL_Y-12698_v1.0 9 9
Pichia_stipitis_CBS_6054_ 10 10
Candida_guilliermondii_ATCC_6260_ 8 8
Lodderomyces_elongisporus_NRRL_YB-4239_ 8 8
Debaromyces_hansenii 10 10
Hansenula_polymorpha_v2.0 10 10
Candida_tanzawaensis_NRRL_Y-17324__v1.0 12 12
Candida_dubliniensis_CD36_ 11 11
Candida_tropicalis_MYA-3404_ 13 13
Candida_parapsilosis_ 10 10
Candida_albicans_SC5314 10 10
Wickerhamomyces_anomalus 10 10
Hanseniaspora_valbyensis_NRRL_Y-1626_v1.1 4 4
Yarrowia_lipolytica_CLIB122 12 12
Hyphopichia_burtonii_NRRL_Y-1933_v1.0 11 11
Candida_lusitaniae_ATCC_42720_ 8 8
Metschnikowia_bicuspidata_NRRL_YB-4993_v1.0 8 8
Pichia_pastoris_GS115_ 7 7
Vanderwaltozyma_polyspora_DSM_70294_ 6 6
Candida_glabrata_CBS138 5 5
Kluyveromyces_thermotolerans_CBS_6340 7 7
Lachancea_kluyveri_ 7 7
Kluyveromyces_waltii 7 7
Ashbya_gossypii_ATCC_10895_ 5 5
Dekkera_bruxellensis_CBS_2499_v2.0 7 7
Zygosaccharomyces_rouxii_ 7 7
Saccharomyces_mikatae_MIT 5 5
Saccharomyces_paradoxus_MIT 5 5
Saccharomyces_cerevisiae_71_4   (Baker's yeast)   5 5
Saccharomyces_bayanus_MIT 6 6
Kluyveromyces_lactis 6 6
Schizosaccharomyces_octosporus_yFS286_ 5 5
Schizosaccharomyces_japonicus_yFS275_ 4 4
Schizosaccharomyces_pombe   (Fission yeast)   4 4
Catenaria_anguillulae_PL171_v1.0 9 9
Allomyces_macrogynus_ATCC_38327_ 17 17
Mortierella_verticillata_NRRL_6337_ 27 26
Conidiobolus_coronatus_NRRL28638_v1.0 8 8
Rhizopus_oryzae_RA_99-880_ 9 9
Phycomyces_blakesleeanus_ 10 10
Mucor_circinelloides_ 11 11
Spizellomyces_punctatus_DAOM_BR117_ 13 13
Dictyostelium_discoideum 22 20
Dictyostelium_purpureum_ 10 10
Entamoeba_dispar_1.2 2 2
Entamoeba_invadens_1.2 2 2
Entamoeba_histolytica_1 4 4
Eucalyptus_grandis_v201   (Rose gum)   166 164
Theobroma_cacao_B97-61/B2_v1   (Cacao)   77 74
Gossypium_raimondii_v221 160 158
Citrus_clementina_v165 96 93
Citrus_sinensis_v154   (Apfelsine)   74 72
Thellungiella_halophila_v173 68 67
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   94 94
Capsella_rubella_v183 69 69
Arabidopsis_lyrata_   (Lyrate rockcress)   70 70
Arabidopsis_thaliana_10   (Thale cress)   96 94
Carica_papaya_   (Papaya)   64 63
Medicago_truncatula_   (Barrel medic)   94 87
Phaseolus_vulgaris_v186   (French bean)   72 68
Glycine_max_v109   (Soybean)   195 181
Cucumis_sativus_v122   (Cucumber)   68 66
Fragaria_vesca_   (Alpine strawberry)   90 89
Malus_domestica_v196   (Apple)   133 120
Prunus_persica_v139   (Peach)   85 84
Linum_usitatissimum_v200   (Flax)   143 139
Manihot_esculenta_v147   (Cassava)   106 103
Populus_trichocarpa_v156   (Black cottonwood)   118 115
Vitis_vinifera_   (Wine grape)   85 82
Mimulus_guttatus_v140   (Spotted monkey flower)   107 101
Solanum_lycopersicum_v.2.3   (Tomato)   86 82
Solanum_tuberosum_   (Potato)   141 135
Aquilegia_coerulea_v195 161 135
Brachypodium_distachyon_ 89 87
Oryza_glaberrima   (African rice)   87 86
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   134 133
Oryza_sativa_v193   (Rice)   134 133
Zea_mays_subsp._mays_   (Maize)   142 136
Zea_mays_v181   (Maize)   152 146
Sorghum_bicolor_   (Sorghum)   91 84
Setaria_italica_v164   (Foxtail millet)   96 94
Panicum_virgatum_v202   (Switchgrass)   194 191
Selaginella_moellendorffii_ 144 143
Physcomitrella_patens_subsp._patens_ 57 55
Ostreococcus_sp._RCC809_ 9 9
Ostreococcus_lucimarinus_CCE9901_ 11 11
Ostreococcus_tauri_ 10 10
Bathycoccus_ 14 14
Micromonas_sp._RCC299_ 20 20
Micromonas_pusilla_CCMP1545_v3.0 217 211
Coccomyxa_sp._C-169_ 18 17
Asterochloris_sp._Cgr/DA1pho_v1.0 13 13
Chlorella_sp._NC64A_ 20 19
Chlorella_vulgaris_ 18 18
Volvox_carteri_f._nagariensis_ 14 14
Volvox_carteri_v199 15 15
Chlamydomonas_reinhardtii_4.0 20 19
Cyanidioschyzon_merolae 8 8
Thecamonas_trahens_ATCC_50062_ 12 12
Trypanosoma_vivax_ 4 4
Trypanosoma_cruzi_strain_CL_Brener 3 3
Trypanosoma_congolense_2.4 5 5
Trypanosoma_brucei_TREU927_v4.1 5 5
Trypanosoma_brucei_gambiense_v4.1 5 5
Leishmania_mexicana_2.4 5 5
Leishmania_major_strain_Friedlin_ 5 5
Leishmania_infantum_JPCM5_2.4 5 5
Leishmania_braziliensis_MHOM/BR/75/M2904_2.4 5 5
Ectocarpus_siliculosus 27 25
Aureococcus_anophagefferens_ 23 23
Pythium_ultimum_v1.7-2 18 18
Phytophthora_ramorum_1.1   (Sudden oak death agent)   11 11
Phytophthora_sojae_1.1 14 14
Phytophthora_infestans_T30-4_ 15 15
Phytophthora_capsici_ 22 22
Phaeodactylum_tricornutumCCAP_1055/1 19 18
Fragilariopsis_cylindrus 30 28
Thalassiosira_pseudonana_CCMP1335 16 15
Perkinsus_marinus_ATCC_50983_ 17 17
Paramecium_tetraurelia_ 11 11
Tetrahymena_thermophila_SB210_1_ 13 13
Ichthyophthirius_multifiliis_strain_G5_ 4 4
Babesia_bovis_T2Bo_ 2 2
Theileria_parva__ 1 1
Theileria_annulata 1 1
Plasmodium_falciparum_3D7_ 2 2
Plasmodium_vivax_SaI-1_7.0 1 1
Plasmodium_knowlesi_strain_H_ 1 1
Plasmodium_yoelii_ssp._yoelii_1_ 1 1
Plasmodium_chabaudi_ 1 1
Plasmodium_berghei_ANKA_ 2 1
Cryptosporidium_hominis 2 2
Cryptosporidium_muris 2 2
Cryptosporidium_parvum_Iowa_II 2 2
Neospora_caninum 3 3
Toxoplasma_gondii_VEG 1 1
Toxoplasma_gondii_ME49 2 2
Toxoplasma_gondii_GT1 1 1
Naegleria_gruberi_ 14 14
Trichomonas_vaginalis_ 19 19
Emiliania_huxleyi_CCMP1516_ 60 56
Acholeplasma_laidlawii_PG-8A 3 3
Mycoplasma_leachii_99/014/6 1 1
Mycoplasma_mycoides_subsp._capri_LC_str._95010 1 1
Mycoplasma_capricolum_subsp._capricolum_ATCC_27343 1 1
Mycoplasma_crocodyli_MP145 2 2
Mycoplasma_conjunctivae_HRC/581 1 1
Mycoplasma_bovis_HB0801 1 1
Mycoplasma_penetrans_HF-2 2 2
Mycoplasma_putrefaciens_KS1 1 1
Mycoplasma_mobile_163K 1 1
Mycoplasma_fermentans_M64 1 1
Mycoplasma_arthritidis_158L3-1 1 1
Mycoplasma_agalactiae_PG2 1 1
Mycoplasma_pulmonis_UAB_CTIP 1 1
Mycoplasma_hyorhinis_GDL-1 1 1
Mycoplasma_hyopneumoniae_168 2 2
Mycoplasma_gallisepticum_str._F 1 1
Thermovirga_lienii_DSM_17291 4 4
Aminobacterium_colombiense_DSM_12261 5 5
Thermanaerovibrio_acidaminovorans_DSM_6589 6 6
Anaerobaculum_mobile_DSM_13181 5 5
Brachyspira_murdochii_DSM_12563 8 8
Brachyspira_intermedia_PWS/A 7 7
Brachyspira_pilosicoli_95/1000 4 4
Brachyspira_hyodysenteriae_WA1 7 7
Turneriella_parva_DSM_21527 16 16
Leptospira_borgpetersenii_serovar_Hardjo-bovis_str._L550 8 8
Leptospira_interrogans_serovar_Lai_str._IPAV 14 14
Leptospira_biflexa_serovar_Patoc_strain_'Patoc_1_(Paris)' 11 11
Sphaerochaeta_pleomorpha_str._Grapes 18 18
Sphaerochaeta_globus_str._Buddy 21 21
Sphaerochaeta_coccoides_DSM_17374 7 7
Treponema_azotonutricium_ZAS-9 14 14
Treponema_primitia_ZAS-2 12 12
Treponema_brennaborense_DSM_12168 7 7
Treponema_succinifaciens_DSM_2489 6 6
Treponema_denticola_ATCC_35405 4 4
Spirochaeta_caldaria_DSM_7334 14 14
Spirochaeta_smaragdinae_DSM_11293 14 14
Spirochaeta_africana_DSM_8902 3 3
Spirochaeta_thermophila_DSM_6192 6 6
Borrelia_garinii_PBi 1 1
Borrelia_bissettii_DN127 1 1
Borrelia_afzelii_PKo 1 1
Borrelia_burgdorferi_B31 1 1
Borrelia_recurrentis_A1 1 1
Borrelia_duttonii_Ly 1 1
Borrelia_crocidurae_str._Achema 1 1
Borrelia_turicatae_91E135 1 1
Borrelia_hermsii_DAH 1 1
Phycisphaera_mikurensis_NBRC_102666 6 6
Rhodopirellula_baltica_SH_1 14 14
Isosphaera_pallida_ATCC_43644 7 7
Pirellula_staleyi_DSM_6068 13 13
Planctomyces_limnophilus_DSM_3776 10 10
Planctomyces_brasiliensis_DSM_5305 14 14
Bifidobacterium_longum_subsp._longum_JDM301 1 1
Bifidobacterium_animalis_subsp._lactis_Bl-04 4 4
Bifidobacterium_dentium_Bd1 5 5
Bifidobacterium_breve_ACS-071-V-Sch8b 4 4
Bifidobacterium_bifidum_S17 3 3
Bifidobacterium_adolescentis_ATCC_15703 6 6
Kineococcus_radiotolerans_SRS30216 15 15
Catenulispora_acidiphila_DSM_44928 36 36
Stackebrandtia_nassauensis_DSM_44728 23 23
Acidothermus_cellulolyticus_11B 11 11
Nakamurella_multipartita_DSM_44233 30 29
Modestobacter_marinus 22 22
Blastococcus_saxobsidens_DD2 22 22
Geodermatophilus_obscurus_DSM_43160 25 25
Frankia_symbiont_of_Datisca_glomerata 14 14
Frankia_sp._EAN1pec 28 28
Frankia_alni_ACN14a 29 29
Thermobifida_fusca_YX 4 4
Nocardiopsis_dassonvillei_subsp._dassonvillei_DSM_43111 21 21
Thermomonospora_curvata_DSM_43183 12 12
Streptosporangium_roseum_DSM_43021 47 46
Kitasatospora_setae_KM-6054 37 37
Streptomyces_sp._SirexAA-E 33 33
Streptomyces_griseus_subsp._griseus_NBRC_13350 32 31
Streptomyces_bingchenggensis_BCW-1 58 58
Streptomyces_violaceusniger_Tu_4113 49 49
Streptomyces_flavogriseus_ATCC_33331 33 33
Streptomyces_avermitilis_MA-4680 33 33
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 35 35
Streptomyces_scabiei_87.22 30 30
Streptomyces_hygroscopicus_subsp._jinggangensis_5008 39 39
Streptomyces_coelicolor_A3(2) 42 42
Thermobispora_bispora_DSM_43833 7 7
Actinosynnema_mirum_DSM_43827 21 21
Saccharomonospora_viridis_DSM_43017 14 14
Pseudonocardia_dioxanivorans_CB1190 47 47
Saccharopolyspora_erythraea_NRRL_2338 31 31
Amycolatopsis_mediterranei_U32 42 41
Kribbella_flavida_DSM_17836 34 34
Nocardioides_sp._JS614 24 23
Microlunatus_phosphovorus_NM-1 21 21
Propionibacterium_propionicum_F0230a 4 4
Propionibacterium_acnes_SK137 6 6
Propionibacterium_freudenreichii_subsp._shermanii_CIRM-BIA1 6 6
Salinispora_arenicola_CNS-205 19 19
Salinispora_tropica_CNB-440 16 16
Verrucosispora_maris_AB-18-032 17 17
Micromonospora_sp._L5 22 22
Micromonospora_aurantiaca_ATCC_27029 23 23
Actinoplanes_sp._SE50/110 20 20
Actinoplanes_missouriensis_431 26 25
Segniliparus_rotundus_DSM_44985 8 8
Tsukamurella_paurometabola_DSM_20162 17 17
Gordonia_polyisoprenivorans_VH2 32 31
Gordonia_bronchialis_DSM_43247 18 18
Rhodococcus_jostii_RHA1 54 52
Rhodococcus_equi_103S 21 21
Rhodococcus_opacus_B4 45 44
Rhodococcus_erythropolis_PR4 44 42
Nocardia_cyriacigeorgica_GUH-2 23 23
Nocardia_farcinica_IFM_10152 25 25
Amycolicicoccus_subflavus_DQS3-9A1 18 18
Mycobacterium_massiliense_str._GO_06 11 11
Mycobacterium_abscessus_ATCC_19977 24 24
Mycobacterium_sp._JLS 24 24
Mycobacterium_intracellulare_ATCC_13950 20 20
Mycobacterium_avium_104 16 16
Mycobacterium_vanbaalenii_PYR-1 30 29
Mycobacterium_canettii_CIPT_140010059 8 8
Mycobacterium_africanum_GM041182 8 8
Mycobacterium_tuberculosis_KZN_1435 8 8
Mycobacterium_bovis_BCG_str._Pasteur_1173P2 8 8
Mycobacterium_rhodesiae_NBB3 24 23
Mycobacterium_ulcerans_Agy99 13 13
Mycobacterium_gilvum_PYR-GCK 29 28
Mycobacterium_chubuense_NBB4 23 23
Mycobacterium_marinum_M 18 17
Mycobacterium_smegmatis_str._MC2_155 39 38
Mycobacterium_leprae_Br4923 2 2
Corynebacterium_resistens_DSM_45100 2 2
Corynebacterium_aurimucosum_ATCC_700975 4 4
Corynebacterium_kroppenstedtii_DSM_44385 4 4
Corynebacterium_efficiens_YS-314 7 7
Corynebacterium_ulcerans_0102 4 4
Corynebacterium_urealyticum_DSM_7109 4 4
Corynebacterium_jeikeium_K411 4 4
Corynebacterium_variabile_DSM_44702 20 18
Corynebacterium_pseudotuberculosis_316 3 3
Corynebacterium_glutamicum_R 8 8
Corynebacterium_diphtheriae_NCTC_13129 3 3
Tropheryma_whipplei_TW08/27 2 2
Sanguibacter_keddieii_DSM_10542 16 16
Kytococcus_sedentarius_DSM_20547 12 12
Beutenbergia_cavernae_DSM_12333 19 19
Leifsonia_xyli_subsp._xyli_str._CTCB07 3 3
Microbacterium_testaceum_StLB037 14 14
Clavibacter_michiganensis_subsp._michiganensis_NCPPB_382 6 6
Jonesia_denitrificans_DSM_20603 2 2
Intrasporangium_calvum_DSM_43043 10 10
Brachybacterium_faecium_DSM_4810 12 12
Isoptericola_variabilis_225 5 5
Xylanimonas_cellulosilytica_DSM_15894 8 8
Cellulomonas_flavigena_DSM_20109 12 12
Cellulomonas_fimi_ATCC_484 11 11
[Cellvibrio]_gilvus_ATCC_13127 6 6
Kocuria_rhizophila_DC2201 5 5
Rothia_mucilaginosa_DY-18 3 3
Rothia_dentocariosa_ATCC_17931 3 3
Arthrobacter_phenanthrenivorans_Sphe3 19 19
Arthrobacter_sp._FB24 17 17
Arthrobacter_arilaitensis_Re117 15 14
Arthrobacter_chlorophenolicus_A6 18 18
Arthrobacter_aurescens_TC1 23 23
Renibacterium_salmoninarum_ATCC_33209 11 11
Micrococcus_luteus_NCTC_2665 3 3
Mobiluncus_curtisii_ATCC_43063 4 4
Arcanobacterium_haemolyticum_DSM_20595 5 5
Actinomyces_sp._F0330 5 5
Olsenella_uli_DSM_7084 6 6
Cryptobacterium_curtum_DSM_15641 6 5
Eggerthella_sp._YY7918 5 5
Eggerthella_lenta_DSM_2243 6 6
Slackia_heliotrinireducens_DSM_20476 4 4
Coriobacterium_glomerans_PW2 6 6
Atopobium_parvulum_DSM_20469 3 3
Conexibacter_woesei_DSM_14684 48 48
Rubrobacter_xylanophilus_DSM_9941 21 21
Acidimicrobium_ferrooxidans_DSM_10331 4 4
Thermodesulfatator_indicus_DSM_15286 6 6
Thermodesulfobacterium_sp._OPB45 3 3
Desulfurispirillum_indicum_S5 6 6
Calditerrivibrio_nitroreducens_DSM_19672 10 10
Denitrovibrio_acetiphilus_DSM_12809 10 10
Deferribacter_desulfuricans_SSM1 9 9
Flexistipes_sinusarabici_DSM_4947 11 11
Mesotoga_prima_MesG1.Ag.4.2 7 7
Kosmotoga_olearia_TBF_19.5.1 5 5
Marinitoga_piezophila_KA3 4 4
Petrotoga_mobilis_SJ95 3 3
Fervidobacterium_pennivorans_DSM_9078 5 5
Fervidobacterium_nodosum_Rt17-B1 4 4
Thermosipho_melanesiensis_BI429 5 5
Thermosipho_africanus_TCF52B 4 4
Thermotoga_lettingae_TMO 8 8
Thermotoga_sp._RQ2 7 7
Thermotoga_thermarum_DSM_5069 6 6
Thermotoga_naphthophila_RKU-10 6 6
Thermotoga_petrophila_RKU-1 6 6
Thermotoga_neapolitana_DSM_4359 9 9
Thermotoga_maritima_MSB8 6 6
Caldilinea_aerophila_DSM_14535_=_NBRC_104270 16 16
Dehalogenimonas_lykanthroporepellens_BL-DC-9 3 3
Anaerolinea_thermophila_UNI-1 5 5
Thermomicrobium_roseum_DSM_5159 7 7
Sphaerobacter_thermophilus_DSM_20745 12 12
Herpetosiphon_aurantiacus_DSM_785 16 16
Roseiflexus_sp._RS-1 7 7
Roseiflexus_castenholzii_DSM_13941 11 10
Chloroflexus_sp._Y-400-fl 8 8
Chloroflexus_aggregans_DSM_9485 8 8
Chloroflexus_aurantiacus_J-10-fl 8 8
Thermovibrio_ammonificans_HB-1 3 3
Desulfurobacterium_thermolithotrophum_DSM_11699 3 3
Sulfurihydrogenibium_sp._YO3AOP1 4 4
Sulfurihydrogenibium_azorense_Az-Fu1 5 5
Persephonella_marina_EX-H1 4 4
Hydrogenobaculum_sp._Y04AAS1 5 5
Thermocrinis_albus_DSM_14484 3 3
Aquifex_aeolicus_VF5 4 4
Hydrogenobacter_thermophilus_TK-6 4 4
Gemmatimonas_aurantiaca_T-27 12 12
Fibrobacter_succinogenes_subsp._succinogenes_S85 8 8
Candidatus_Koribacter_versatilis_Ellin345 26 26
Candidatus_Chloracidobacterium_thermophilum_B 9 9
Candidatus_Solibacter_usitatus_Ellin6076 41 41
Granulicella_tundricola_MP5ACTX9 25 24
Granulicella_mallensis_MP5ACTX8 37 37
Terriglobus_saanensis_SP1PR4 25 25
Terriglobus_roseus_DSM_18391 26 26
Acidobacterium_capsulatum_ATCC_51196 10 10
Elusimicrobium_minutum_Pei191 3 3
Melioribacter_roseus_P3M 10 10
Ignavibacterium_album_JCM_16511 8 8
Pelodictyon_phaeoclathratiforme_BU-1 5 5
Chlorobium_luteolum_DSM_273 4 4
Chlorobium_chlorochromatii_CaD3 4 4
Chlorobium_phaeobacteroides_DSM_266 5 5
Chlorobium_phaeovibrioides_DSM_265 6 6
Chlorobium_limicola_DSM_245 5 5
Chlorobaculum_parvum_NCIB_8327 5 5
Chlorobium_tepidum_TLS 3 3
Chloroherpeton_thalassium_ATCC_35110 4 4
Prosthecochloris_aestuarii_DSM_271 6 6
Salinibacter_ruber_M8 7 7
Rhodothermus_marinus_DSM_4252 7 7
Belliella_baltica_DSM_15883 10 10
Cyclobacterium_marinum_DSM_745 16 16
Marivirga_tractuosa_DSM_4126 9 9
Leadbetterella_byssophila_DSM_17132 17 17
Dyadobacter_fermentans_DSM_18053 34 34
Flexibacter_litoralis_DSM_6794 4 4
Cytophaga_hutchinsonii_ATCC_33406 10 10
Spirosoma_linguale_DSM_74 38 37
Runella_slithyformis_DSM_19594 31 31
Candidatus_Azobacteroides_pseudotrichonymphae_genomovar._CFP2 1 1
Prevotella_melaninogenica_ATCC_25845 9 9
Prevotella_intermedia_17 8 8
Prevotella_denticola_F0289 6 6
Prevotella_ruminicola_23 13 13
Parabacteroides_distasonis_ATCC_8503 21 21
Paludibacter_propionicigenes_WB4 14 14
Odoribacter_splanchnicus_DSM_20712 10 10
Tannerella_forsythia_ATCC_43037 8 8
Porphyromonas_asaccharolytica_DSM_20707 3 3
Porphyromonas_gingivalis_ATCC_33277 3 3
Alistipes_finegoldii_DSM_17242 9 9
Bacteroides_salanitronis_DSM_18170 13 13
Bacteroides_helcogenes_P_36-108 18 18
Bacteroides_vulgatus_ATCC_8482 17 17
Bacteroides_thetaiotaomicron_VPI-5482 19 19
Bacteroides_fragilis_YCH46 22 22
Candidatus_Amoebophilus_asiaticus_5a2 1 1
Niastella_koreensis_GR20-10 34 33
Chitinophaga_pinensis_DSM_2588 35 35
Haliscomenobacter_hydrossis_DSM_1100 36 35
Saprospira_grandis_str._Lewin 5 5
Solitalea_canadensis_DSM_3403 19 19
Pedobacter_saltans_DSM_12145 18 18
Pedobacter_heparinus_DSM_2366 19 19
Sphingobacterium_sp._21 24 24
Fluviicola_taffensis_DSM_16823 14 14
Owenweeksia_hongkongensis_DSM_17368 14 14
Zunongwangia_profunda_SM-A87 16 16
Krokinobacter_sp._4H-3-7-5 17 17
Gramella_forsetii_KT0803 13 13
Lacinutrix_sp._5H-3-7-4 14 14
Maribacter_sp._HTCC2170 24 24
Robiginitalea_biformata_HTCC2501 10 10
Croceibacter_atlanticus_HTCC2559 11 10
Aequorivita_sublithincola_DSM_14238 10 10
Zobellia_galactanivorans 28 28
Muricauda_ruestringensis_DSM_13258 14 14
Cellulophaga_algicola_DSM_14237 16 16
Cellulophaga_lytica_DSM_7489 19 19
Flavobacteriaceae_bacterium_3519-10 12 12
Riemerella_anatipestifer_ATCC_11845_=_DSM_15868 4 4
Ornithobacterium_rhinotracheale_DSM_15997 3 3
Capnocytophaga_canimorsus_Cc5 8 8
Capnocytophaga_ochracea_DSM_7271 5 5
Weeksella_virosa_DSM_16922 7 7
Flavobacterium_indicum_GPTSA100-9 10 10
Flavobacterium_psychrophilum_JIP02/86 7 7
Flavobacterium_branchiophilum_FL-15 12 12
Flavobacterium_columnare_ATCC_49512 7 7
Flavobacterium_johnsoniae_UW101 21 21
Dictyoglomus_turgidum_DSM_6724 5 5
Dictyoglomus_thermophilum_H-6-12 6 6
Caldisericum_exile_AZM16c01 1 1
Waddlia_chondrophila_WSU_86-1044 2 2
Candidatus_Protochlamydia_amoebophila_UWE25 1 1
Parachlamydia_acanthamoebae_UV-7 9 7
Simkania_negevensis_Z 9 9
Coraliomargarita_akajimensis_DSM_45221 17 16
Opitutus_terrae_PB90-1 20 20
Methylacidiphilum_infernorum_V4 4 4
Akkermansia_muciniphila_ATCC_BAA-835 7 7
Thermodesulfovibrio_yellowstonii_DSM_11347 5 5
Candidatus_Nitrospira_defluvii 11 11
Leptospirillum_ferrooxidans_C2-3 12 11
Streptobacillus_moniliformis_DSM_12112 3 3
Sebaldella_termitidis_ATCC_33386 18 18
Leptotrichia_buccalis_C-1013-b 8 8
Ilyobacter_polytropus_DSM_2926 14 14
Fusobacterium_nucleatum_subsp._nucleatum_ATCC_25586 8 8
Candidatus_Methylomirabilis_oxyfera 7 7
Candidatus_Cloacamonas_acidaminovorans 5 5
Thermobaculum_terrenum_ATCC_BAA-798 10 10
Truepera_radiovictrix_DSM_17093 10 10
Deinococcus_gobiensis_I-0 9 9
Deinococcus_deserti_VCD115 10 10
Deinococcus_maricopensis_DSM_21211 12 12
Deinococcus_geothermalis_DSM_11300 5 5
Deinococcus_proteolyticus_MRP 3 3
Deinococcus_radiodurans_R1 7 7
Oceanithermus_profundus_DSM_14977 6 6
Marinithermus_hydrothermalis_DSM_14884 6 6
Meiothermus_silvanus_DSM_9946 18 17
Meiothermus_ruber_DSM_1279 12 12
Thermus_sp._CCB_US3_UF1 3 3
Thermus_scotoductus_SA-01 5 5
Thermus_thermophilus_HB27 4 4
Acidaminococcus_intestini_RyC-MR95 8 8
Acidaminococcus_fermentans_DSM_20731 7 7
Veillonella_parvula_DSM_2008 6 6
Selenomonas_sputigena_ATCC_35185 8 7
Selenomonas_ruminantium_subsp._lactilytica_TAM6421 12 12
Megasphaera_elsdenii_DSM_20460 7 6
Erysipelothrix_rhusiopathiae_str._Fujisawa 4 4
Natranaerobius_thermophilus_JW/NM-WN-LF 3 3
Ethanoligenens_harbinense_YUAN-3 10 10
Ruminococcus_albus_7 8 8
Symbiobacterium_thermophilum_IAM_14863 5 5
Anaerococcus_prevotii_DSM_20548 4 4
Finegoldia_magna_ATCC_29328 4 4
Thermaerobacter_marianensis_DSM_12885 3 3
Sulfobacillus_acidophilus_DSM_10332 15 15
Oscillibacter_valericigenes_Sjm18-20 13 13
Clostridiales_genomosp._BVAB3_str._UPII9-5 1 1
Candidatus_Desulforudis_audaxviator_MP104C 2 2
Thermincola_potens_JR 4 4
Pelotomaculum_thermopropionicum_SI 1 1
Desulfosporosinus_acidiphilus_SJ4 8 8
Desulfosporosinus_orientis_DSM_765 21 21
Syntrophobotulus_glycolicus_DSM_8271 4 4
Desulfitobacterium_hafniense_Y51 17 17
Desulfitobacterium_dehalogenans_ATCC_51507 17 17
Desulfotomaculum_carboxydivorans_CO-1-SRB 4 4
Desulfotomaculum_reducens_MI-1 10 10
Desulfotomaculum_acetoxidans_DSM_771 7 7
Desulfotomaculum_kuznetsovii_DSM_6115 1 1
Desulfotomaculum_ruminis_DSM_2154 12 12
Acetobacterium_woodii_DSM_1030 11 11
Eubacterium_rectale_ATCC_33656 11 11
Eubacterium_eligens_ATCC_27750 12 11
Eubacterium_limosum_KIST612 11 11
Filifactor_alocis_ATCC_35896 2 2
Clostridium_sticklandii_DSM_519 10 10
Clostridium_difficile_630 15 15
Clostridium_lentocellum_DSM_5427 12 12
Roseburia_hominis_A2-183 10 10
Butyrivibrio_proteoclasticus_B316 14 14
Syntrophothermus_lipocalidus_DSM_12680 3 3
Syntrophomonas_wolfei_subsp._wolfei_str._Goettingen 2 2
Heliobacterium_modesticaldum_Ice1 3 3
Alkaliphilus_oremlandii_OhILAs 7 7
Alkaliphilus_metalliredigens_QYMF 9 9
Candidatus_Arthromitus_sp._SFB-mouse-Japan 3 3
Clostridium_sp._BNL1100 6 6
Clostridium_clariflavum_DSM_19732 8 8
Clostridium_saccharolyticum_WM1 28 28
Clostridium_phytofermentans_ISDg 17 17
Clostridium_novyi_NT 4 4
Clostridium_ljungdahlii_DSM_13528 17 17
Clostridium_kluyveri_DSM_555 13 13
Clostridium_cellulolyticum_H10 10 10
Clostridium_beijerinckii_NCIMB_8052 26 26
Clostridium_thermocellum_ATCC_27405 8 8
Clostridium_tetani_E88 8 8
Clostridium_perfringens_ATCC_13124 11 11
Clostridium_cellulovorans_743B 15 15
Clostridium_botulinum_A_str._ATCC_3502 15 15
Clostridium_acetobutylicum_ATCC_824 7 7
Mahella_australiensis_50-1_BON 7 7
Thermosediminibacter_oceani_DSM_16646 3 3
Caldicellulosiruptor_obsidiansis_OB47 3 3
Caldicellulosiruptor_kronotskyensis_2002 4 4
Caldicellulosiruptor_hydrothermalis_108 5 5
Caldicellulosiruptor_owensensis_OL 2 2
Caldicellulosiruptor_lactoaceticus_6A 4 4
Caldicellulosiruptor_kristjanssonii_177R1B 3 3
Caldicellulosiruptor_saccharolyticus_DSM_8903 6 6
Caldicellulosiruptor_bescii_DSM_6725 3 3
Thermoanaerobacterium_xylanolyticum_LX-11 3 3
Thermoanaerobacterium_thermosaccharolyticum_DSM_571 4 4
Thermodesulfobium_narugense_DSM_14796 8 8
Coprothermobacter_proteolyticus_DSM_5265 1 1
Tepidanaerobacter_acetatoxydans_Re1 11 11
Thermoanaerobacter_tengcongensis_MB4 1 1
Carboxydothermus_hydrogenoformans_Z-2901 2 2
Moorella_thermoacetica_ATCC_39073 5 5
Ammonifex_degensii_KC4 2 2
Thermoanaerobacter_mathranii_subsp._mathranii_str._A3 5 5
Thermoanaerobacter_pseudethanolicus_ATCC_33223 4 4
Thermoanaerobacter_sp._X514 3 3
Thermoanaerobacter_italicus_Ab9 6 6
Thermoanaerobacter_wiegelii_Rt8.B1 5 5
Thermoanaerobacter_brockii_subsp._finnii_Ako-1 4 4
Acetohalobium_arabaticum_DSM_5501 9 9
Halothermothrix_orenii_H_168 4 4
Halanaerobium_hydrogeniformans 6 6
Halanaerobium_praevalens_DSM_2228 2 2
Carnobacterium_sp._17-4 7 7
Aerococcus_urinae_ACS-120-V-Col10a 3 3
Tetragenococcus_halophilus_NBRC_12172 6 6
Melissococcus_plutonius_DAT561 6 6
Enterococcus_hirae_ATCC_9790 3 3
Enterococcus_faecium_Aus0004 6 6
Enterococcus_faecalis_62 9 9
Weissella_koreensis_KACC_15510 5 5
Oenococcus_oeni_PSU-1 5 5
Leuconostoc_sp._C2 3 3
Leuconostoc_kimchii_IMSNU_11154 3 3
Leuconostoc_gasicomitatum_LMG_18811 2 2
Leuconostoc_citreum_KM20 3 3
Leuconostoc_mesenteroides_subsp._mesenteroides_ATCC_8293 5 5
Lactobacillus_casei_ATCC_334 5 5
Lactobacillus_kefiranofaciens_ZW3 4 4
Lactobacillus_crispatus_ST1 4 4
Lactobacillus_rhamnosus_Lc_705 8 8
Lactobacillus_johnsonii_FI9785 2 2
Lactobacillus_sanfranciscensis_TMW_1.1304 3 3
Lactobacillus_salivarius_CECT_5713 2 2
Lactobacillus_ruminis_ATCC_27782 4 4
Lactobacillus_fermentum_IFO_3956 7 7
Lactobacillus_amylovorus_GRL1118 3 3
Lactobacillus_sakei_subsp._sakei_23K 3 3
Lactobacillus_reuteri_DSM_20016 3 3
Lactobacillus_gasseri_ATCC_33323 4 4
Lactobacillus_plantarum_JDM1 9 9
Lactobacillus_helveticus_DPC_4571 2 2
Lactobacillus_delbrueckii_subsp._bulgaricus_ATCC_BAA-365 3 3
Lactobacillus_buchneri_NRRL_B-30929 1 1
Lactobacillus_brevis_ATCC_367 5 5
Lactobacillus_acidophilus_30SC 2 2
Pediococcus_claussenii_ATCC_BAA-344 2 2
Pediococcus_pentosaceus_ATCC_25745 2 2
Lactococcus_garvieae_ATCC_49156 3 3
Lactococcus_lactis_subsp._cremoris_MG1363 4 4
Streptococcus_intermedius_JTH08 4 4
Streptococcus_gallolyticus_UCN34 4 4
Streptococcus_pseudopneumoniae_IS7493 2 2
Streptococcus_pasteurianus_ATCC_43144 3 3
Streptococcus_equi_subsp._equi_4047 4 4
Streptococcus_dysgalactiae_subsp._equisimilis_GGS_124 5 5
Streptococcus_infantarius_subsp._infantarius_CJ18 2 2
Streptococcus_macedonicus_ACA-DC_198 3 3
Streptococcus_mitis_B6 1 1
Streptococcus_uberis_0140J 5 5
Streptococcus_parauberis_KCTC_11537 6 6
Streptococcus_parasanguinis_ATCC_15912 3 3
Streptococcus_pyogenes_str._Manfredo 5 5
Streptococcus_pneumoniae_P1031 3 3
Streptococcus_agalactiae_A909 6 6
Streptococcus_mutans_NN2025 4 4
Streptococcus_thermophilus_LMD-9 3 3
Streptococcus_suis_P1/7 2 2
Streptococcus_sanguinis_SK36 5 5
Streptococcus_salivarius_57.I 3 3
Streptococcus_oralis_Uo5 1 1
Streptococcus_gordonii_str._Challis_substr._CH1 4 4
Exiguobacterium_sp._AT1b 10 10
Exiguobacterium_sibiricum_255-15 5 5
Kyrpidia_tusciae_DSM_2912 10 10
Alicyclobacillus_acidocaldarius_subsp._acidocaldarius_DSM_446 8 8
Brevibacillus_brevis_NBRC_100599 21 21
Paenibacillus_sp._JDR-2 33 33
Paenibacillus_terrae_HPL-003 28 28
Paenibacillus_mucilaginosus_3016 27 27
Paenibacillus_polymyxa_M1 17 17
Listeria_welshimeri_serovar_6b_str._SLCC5334 4 4
Listeria_innocua_Clip11262 6 6
Listeria_seeligeri_serovar_1/2b_str._SLCC3954 8 8
Listeria_monocytogenes_serotype_4b_str._CLIP_80459 7 7
Listeria_ivanovii_subsp._ivanovii_PAM_55 7 7
Solibacillus_silvestris_StLB046 9 9
Lysinibacillus_sphaericus_C3-41 14 14
Oceanobacillus_iheyensis_HTE831 8 8
Anoxybacillus_flavithermus_WK1 3 3
Geobacillus_sp._WCH70 3 3
Geobacillus_thermoleovorans_CCB_US3_UF5 5 5
Geobacillus_thermodenitrificans_NG80-2 7 7
Geobacillus_kaustophilus_HTA426 9 9
Geobacillus_thermoglucosidasius_C56-YS93 9 9
Halobacillus_halophilus_DSM_2266 8 8
Bacillus_sp._JS 17 17
Bacillus_atrophaeus_1942 14 14
Bacillus_subtilis_subsp._subtilis_str._168 17 17
Bacillus_licheniformis_DSM_13_=_ATCC_14580 14 14
Bacillus_amyloliquefaciens_FZB42 16 16
Bacillus_halodurans_C-125 15 15
Bacillus_weihenstephanensis_KBAB4 18 18
Bacillus_thuringiensis_str._Al_Hakam 21 21
Bacillus_cereus_03BB102 20 20
Bacillus_anthracis_str._A0248 16 16
Bacillus_selenitireducens_MLS10 4 4
Bacillus_pseudofirmus_OF4 6 6
Bacillus_clausii_KSM-K16 16 16
Bacillus_cellulosilyticus_DSM_2522 6 6
Bacillus_pumilus_SAFR-032 11 11
Bacillus_megaterium_DSM_319 20 20
Bacillus_coagulans_2-6 4 4
Macrococcus_caseolyticus_JCSC5402 4 4
Staphylococcus_pseudintermedius_HKU10-03 4 4
Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305 8 8
Staphylococcus_lugdunensis_HKU09-01 6 6
Staphylococcus_haemolyticus_JCSC1435 4 4
Staphylococcus_epidermidis_RP62A 4 4
Staphylococcus_carnosus_subsp._carnosus_TM300 6 6
Staphylococcus_aureus_subsp._aureus_JH1 5 5
Nautilia_profundicola_AmH 4 4
Sulfurospirillum_deleyianum_DSM_6946 6 6
Sulfurospirillum_barnesii_SES-3 4 4
Arcobacter_sp._L 11 11
Arcobacter_nitrofigilis_DSM_7299 14 14
Arcobacter_butzleri_RM4018 8 8
Campylobacter_hominis_ATCC_BAA-381 1 1
Campylobacter_lari_RM2100 2 2
Campylobacter_curvus_525.92 7 6
Campylobacter_concisus_13826 3 2
Campylobacter_jejuni_subsp._doylei_269.97 4 4
Campylobacter_fetus_subsp._fetus_82-40 2 2
Sulfuricurvum_kujiense_DSM_16994 10 10
Sulfurimonas_autotrophica_DSM_16294 4 4
Sulfurimonas_denitrificans_DSM_1251 4 4
Wolinella_succinogenes_DSM_1740 3 3
Helicobacter_cetorum_MIT_00-7128 2 2
Helicobacter_bizzozeronii_CIII-1 5 5
Helicobacter_hepaticus_ATCC_51449 4 4
Helicobacter_mustelae_12198 1 1
Helicobacter_felis_ATCC_49179 2 2
Helicobacter_cinaedi_PAGU611 2 2
Helicobacter_acinonychis_str._Sheeba 1 1
Helicobacter_pylori_B38 2 2
Nitratifractor_salsuginis_DSM_16511 4 4
Nitratiruptor_sp._SB155-2 4 4
Sulfurovum_sp._NBC37-1 5 5
Desulfarculus_baarsii_DSM_2075 12 12
Bacteriovorax_marinus_SJ 10 10
Bdellovibrio_bacteriovorus_HD100 13 13
Desulfobacca_acetoxidans_DSM_11109 6 6
Syntrophus_aciditrophicus_SB 14 14
Desulfomonile_tiedjei_DSM_6799 18 18
Syntrophobacter_fumaroxidans_MPOB 12 12
Desulfurivibrio_alkaliphilus_AHT2 10 10
Desulfotalea_psychrophila_LSv54 9 9
Desulfobulbus_propionicus_DSM_2032 8 8
Desulfatibacillum_alkenivorans_AK-01 16 16
Desulfobacterium_autotrophicum_HRM2 13 13
Desulfococcus_oleovorans_Hxd3 12 12
Desulfohalobium_retbaense_DSM_5692 8 8
Desulfomicrobium_baculatum_DSM_4028 13 13
Lawsonia_intracellularis_PHE/MN1-00 4 4
Desulfovibrio_magneticus_RS-1 10 10
Desulfovibrio_aespoeensis_Aspo-2 11 11
Desulfovibrio_alaskensis_G20 9 9
Desulfovibrio_vulgaris_subsp._vulgaris_DP4 7 7
Desulfovibrio_salexigens_DSM_2638 12 12
Desulfovibrio_desulfuricans_subsp._desulfuricans_str._ATCC_27774 10 10
Desulfovibrio_africanus_str._Walvis_Bay 16 16
Hippea_maritima_DSM_10411 4 4
Pelobacter_propionicus_DSM_2379 14 14
Pelobacter_carbinolicus_DSM_2380 17 17
Geobacter_daltonii_FRC-32 13 13
Geobacter_sp._M21 11 11
Geobacter_uraniireducens_Rf4 18 18
Geobacter_lovleyi_SZ 14 14
Geobacter_bemidjiensis_Bem 21 21
Geobacter_sulfurreducens_KN400 12 12
Geobacter_metallireducens_GS-15 11 11
Haliangium_ochraceum_DSM_14365 21 20
Sorangium_cellulosum_'So_ce_56' 38 38
Stigmatella_aurantiaca_DW4/3-1 38 38
Anaeromyxobacter_sp._Fw109-5 18 17
Anaeromyxobacter_dehalogenans_2CP-1 16 16
Corallococcus_coralloides_DSM_2259 33 33
Myxococcus_xanthus_DK_1622 29 29
Myxococcus_fulvus_HW-1 24 24
Sideroxydans_lithotrophicus_ES-1 7 7
Gallionella_capsiferriformans_ES-2 6 6
Aromatoleum_aromaticum_EbN1 14 14
Dechlorosoma_suillum_PS 15 15
Dechloromonas_aromatica_RCB 16 16
Thauera_sp._MZ1T 15 14
Azoarcus_sp._BH72 22 22
Pseudogulbenkiania_sp._NH8B 28 28
Laribacter_hongkongensis_HLHK9 11 11
Chromobacterium_violaceum_ATCC_12472 25 25
Neisseria_meningitidis_alpha14 3 3
Neisseria_meningitidis_FAM18 4 4
Neisseria_lactamica_020-06 2 2
Neisseria_gonorrhoeae_NCCP11945 3 3
Methylotenera_versatilis_301 12 12
Methylotenera_mobilis_JLW8 11 11
Methylovorus_sp._MP688 12 12
Methylovorus_glucosetrophus_SIP3-4 13 13
Methylobacillus_flagellatus_KT 13 13
Thiobacillus_denitrificans_ATCC_25259 7 7
Candidatus_Accumulibacter_phosphatis_clade_IIA_str._UW-1 13 11
Methylibium_petroleiphilum_PM1 18 18
Thiomonas_intermedia_K12 9 8
Rubrivivax_gelatinosus_IL144 22 22
Leptothrix_cholodnii_SP-6 22 22
Ralstonia_eutropha_JMP134 43 43
Cupriavidus_taiwanensis_LMG_19424 34 34
Cupriavidus_metallidurans_CH34 35 35
Cupriavidus_necator_N-1 64 63
Ralstonia_eutropha_H16 47 47
Ralstonia_pickettii_12D 29 29
Ralstonia_solanacearum_CFBP2957 18 18
Polynucleobacter_necessarius_subsp._asymbioticus_QLW-P1DMWA-1 11 10
Burkholderia_sp._CCGE1002 63 62
Burkholderia_rhizoxinica_HKI_454 9 9
Burkholderia_phytofirmans_PsJN 66 66
Burkholderia_phymatum_STM815 61 60
Burkholderia_thailandensis_E264 37 37
Burkholderia_pseudomallei_1106a 38 38
Burkholderia_mallei_SAVP1 26 26
Burkholderia_ambifaria_AMMD 66 65
Burkholderia_cenocepacia_HI2424 66 66
Burkholderia_multivorans_ATCC_17616 48 48
Burkholderia_vietnamiensis_G4 58 57
Burkholderia_xenovorans_LB400 70 69
Burkholderia_gladioli_BSR3 65 65
Burkholderia_glumae_BGR1 38 37
Rhodoferax_ferrireducens_T118 21 21
Verminephrobacter_eiseniae_EF01-2 17 17
Alicycliphilus_denitrificans_K601 14 14
Ramlibacter_tataouinensis_TTB310 15 15
Delftia_sp._Cs1-4 38 38
Delftia_acidovorans_SPH-1 31 31
Polaromonas_sp._JS666 46 46
Polaromonas_naphthalenivorans_CJ2 17 17
Variovorax_paradoxus_S110 56 55
Acidovorax_ebreus_TPSY 9 9
Acidovorax_sp._JS42 9 9
Acidovorax_citrulli_AAC00-1 23 22
Acidovorax_avenae_subsp._avenae_ATCC_19860 30 30
Comamonas_testosteroni_CNB-2 26 26
Herminiimonas_arsenicoxydans 16 16
Collimonas_fungivorans_Ter331 29 28
Janthinobacterium_sp._Marseille 26 25
Herbaspirillum_seropedicae_SmR1 22 21
Pusillimonas_sp._T7-7 20 20
Advenella_kashmirensis_WT001 27 26
Taylorella_asinigenitalis_MCE3 2 2
Taylorella_equigenitalis_MCE9 2 2
Bordetella_petrii_DSM_12804 28 28
Bordetella_avium_197N 21 21
Bordetella_pertussis_Tohama_I 24 23
Bordetella_parapertussis_12822 34 34
Bordetella_bronchiseptica_RB50 40 40
Achromobacter_xylosoxidans_A8 53 52
Nitrosospira_multiformis_ATCC_25196 7 7
Nitrosomonas_sp._Is79A3 7 7
Nitrosomonas_eutropha_C91 4 4
Nitrosomonas_europaea_ATCC_19718 6 6
Magnetococcus_marinus_MC-1 8 8
Parvularcula_bermudensis_HTCC2503 7 6
Asticcacaulis_excentricus_CB_48 15 15
Brevundimonas_subvibrioides_ATCC_15264 7 7
Caulobacter_sp._K31 24 22
Caulobacter_crescentus_NA1000 12 12
Caulobacter_segnis_ATCC_21756 19 19
Phenylobacterium_zucineum_HLK1 20 20
Erythrobacter_litoralis_HTCC2594 6 6
Sphingopyxis_alaskensis_RB2256 8 8
Novosphingobium_sp._PP1Y 15 14
Novosphingobium_aromaticivorans_DSM_12444 13 13
Sphingobium_sp._SYK-6 15 15
Sphingobium_japonicum_UT26S 13 13
Sphingobium_chlorophenolicum_L-1 20 20
Sphingomonas_wittichii_RW1 43 41
Zymomonas_mobilis_subsp._mobilis_NCIMB_11163 4 4
Maricaulis_maris_MCS10 11 11
Hirschia_baltica_ATCC_49814 11 10
Hyphomonas_neptunium_ATCC_15444 16 16
Dinoroseobacter_shibae_DFL_12 22 21
Phaeobacter_gallaeciensis_2.10 23 23
Pseudovibrio_sp._FO-BEG1 31 30
Jannaschia_sp._CCS1 29 28
Ruegeria_sp._TM1040 24 24
Ruegeria_pomeroyi_DSS-3 34 33
Ketogulonicigenium_vulgare_Y25 15 15
Ketogulonigenium_vulgarum_WSH-001 15 15
Roseobacter_litoralis_Och_149 29 28
Roseobacter_denitrificans_OCh_114 26 25
Rhodobacter_sphaeroides_ATCC_17029 20 20
Rhodobacter_capsulatus_SB_1003 13 13
Paracoccus_denitrificans_PD1222 25 25
Tistrella_mobilis_KA081020-065 51 50
Magnetospirillum_magneticum_AMB-1 15 15
Rhodospirillum_centenum_SW 13 13
Rhodospirillum_rubrum_F11 12 12
Rhodospirillum_photometricum_DSM_122 9 9
Azospirillum_sp._B510 37 37
Azospirillum_lipoferum_4B 29 29
Azospirillum_brasilense_Sp245 31 31
Granulibacter_bethesdensis_CGDNIH1 9 9
Gluconacetobacter_diazotrophicus_PAl_5 18 18
Gluconacetobacter_xylinus_NBRC_3288 15 15
Acidiphilium_multivorum_AIU301 18 17
Acidiphilium_cryptum_JF-5 16 15
Gluconobacter_oxydans_621H 11 11
Acetobacter_pasteurianus_IFO_3283-01 6 6
Polymorphum_gilvum_SL003B-26A1 20 20
Micavibrio_aeruginosavorus_ARL-13 4 4
Candidatus_Puniceispirillum_marinum_IMCC1322 16 16
Candidatus_Pelagibacter_sp._IMCC9063 4 4
Wolbachia_endosymbiont_of_Culex_quinquefasciatus_Pel 1 1
Wolbachia_sp._wRi 1 1
Starkeya_novella_DSM_506 27 27
Xanthobacter_autotrophicus_Py2 21 21
Azorhizobium_caulinodans_ORS_571 31 31
Methylobacterium_chloromethanicum_CM4 25 25
Methylobacterium_extorquens_AM1 25 25
Methylobacterium_sp._4-46 38 38
Methylobacterium_populi_BJ001 23 23
Methylobacterium_nodulans_ORS_2060 46 46
Methylobacterium_radiotolerans_JCM_2831 33 33
Ochrobactrum_anthropi_ATCC_49188 22 22
Brucella_microti_CCM_4915 13 13
Brucella_pinnipedialis_B2/94 13 13
Brucella_canis_ATCC_23365 13 13
Brucella_suis_ATCC_23445 12 12
Brucella_melitensis_ATCC_23457 14 14
Brucella_ovis_ATCC_25840 10 10
Brucella_abortus_S19 12 12
Sinorhizobium_fredii_NGR234 51 51
Sinorhizobium_medicae_WSM419 42 42
Sinorhizobium_meliloti_AK83 46 45
Rhizobium_etli_CIAT_652 49 48
Rhizobium_leguminosarum_bv._viciae_3841 50 49
Agrobacterium_tumefaciens_str._C58 33 33
Agrobacterium_radiobacter_K84 64 64
Agrobacterium_sp._H13-3 35 34
Agrobacterium_vitis_S4 31 31
Candidatus_Liberibacter_asiaticus_str._psy62 1 1
Mesorhizobium_sp._BNC1 25 25
Parvibaculum_lavamentivorans_DS-1 14 14
Mesorhizobium_opportunistum_WSM2075 50 50
Mesorhizobium_ciceri_biovar_biserrulae_WSM1271 45 44
Mesorhizobium_loti_MAFF303099 50 50
Methylocella_silvestris_BL2 28 27
Beijerinckia_indica_subsp._indica_ATCC_9039 20 19
Pelagibacterium_halotolerans_B2 21 21
Rhodomicrobium_vannielii_ATCC_17100 15 15
Hyphomicrobium_sp._MC1 27 27
Hyphomicrobium_denitrificans_ATCC_51888 15 15
Oligotropha_carboxidovorans_OM4 18 18
Rhodopseudomonas_palustris_BisA53 18 18
Nitrobacter_winogradskyi_Nb-255 9 9
Nitrobacter_hamburgensis_X14 16 16
Bradyrhizobium_sp._ORS_278 34 34
Bradyrhizobium_japonicum_USDA_110 60 60
Acidithiobacillus_ferrivorans_SS3 9 9
Acidithiobacillus_caldus_SM-1 8 8
Acidithiobacillus_ferrooxidans_ATCC_53993 13 12
Aggregatibacter_aphrophilus_NJ8700 4 4
Aggregatibacter_actinomycetemcomitans_D7S-1 5 5
Haemophilus_somnus_129PT 3 3
Gallibacterium_anatis_UMN179 6 6
Pasteurella_multocida_subsp._multocida_str._3480 6 6
Haemophilus_parasuis_SH0165 3 3
Haemophilus_ducreyi_35000HP 1 1
Haemophilus_parainfluenzae_T3T1 3 3
Haemophilus_influenzae_PittEE 1 1
Actinobacillus_succinogenes_130Z 6 6
Actinobacillus_pleuropneumoniae_serovar_5b_str._L20 2 2
Oceanimonas_sp._GK1 25 24
Tolumonas_auensis_DSM_9187 16 16
Aeromonas_veronii_B565 18 18
Aeromonas_salmonicida_subsp._salmonicida_A449 13 13
Aeromonas_hydrophila_subsp._hydrophila_ATCC_7966 25 25
Aliivibrio_salmonicida_LFI1238 18 17
Vibrio_fischeri_MJ11 17 16
Vibrio_parahaemolyticus_RIMD_2210633 20 19
Vibrio_harveyi_ATCC_BAA-1116 14 14
Vibrio_sp._Ex25 23 22
Vibrio_anguillarum_775 11 11
Vibrio_splendidus_LGP32 17 16
Vibrio_furnissii_NCTC_11218 28 28
Vibrio_vulnificus_MO6-24/O 13 13
Vibrio_cholerae_O395 12 12
Photobacterium_profundum_SS9 24 23
Psychromonas_ingrahamii_37 13 12
Idiomarina_loihiensis_L2TR 9 8
Ferrimonas_balearica_DSM_9799 14 13
Shewanella_piezotolerans_WP3 15 14
Shewanella_loihica_PV-4 17 17
Shewanella_halifaxensis_HAW-EB4 15 15
Shewanella_sediminis_HAW-EB3 18 17
Shewanella_denitrificans_OS217 18 17
Shewanella_pealeana_ATCC_700345 15 15
Shewanella_oneidensis_MR-1 16 16
Shewanella_baltica_OS185 23 22
Shewanella_woodyi_ATCC_51908 18 17
Shewanella_sp._MR-4 19 19
Shewanella_amazonensis_SB2B 14 14
Shewanella_violacea_DSS12 19 18
Shewanella_frigidimarina_NCIMB_400 17 16
Shewanella_putrefaciens_CN-32 16 16
Colwellia_psychrerythraea_34H 25 23
Pseudoalteromonas_sp._SM9913 10 9
Pseudoalteromonas_atlantica_T6c 18 17
Pseudoalteromonas_haloplanktis_TAC125 12 11
Teredinibacter_turnerae_T7901 19 19
Saccharophagus_degradans_2-40 13 13
Glaciecola_sp._4H-3-7+YE-5 22 21
Glaciecola_nitratireducens_FR1064 11 10
Marinobacter_adhaerens_HP15 18 17
Marinobacter_hydrocarbonoclasticus_ATCC_49840 16 14
Marinobacter_aquaeolei_VT8 20 16
Alteromonas_sp._SN2 17 17
Alteromonas_macleodii_str._'Deep_ecotype' 15 14
Hahella_chejuensis_KCTC_2396 27 27
Kangiella_koreensis_DSM_16069 6 6
Alcanivorax_borkumensis_SK2 10 8
Marinomonas_posidonica_IVIA-Po-181 29 28
Marinomonas_sp._MWYL1 36 35
Marinomonas_mediterranea_MMB-1 28 28
Chromohalobacter_salexigens_DSM_3043 20 20
Halomonas_elongata_DSM_2581 22 22
Methylomicrobium_alcaliphilum 12 12
Methylomonas_methanica_MC09 12 12
Methylococcus_capsulatus_str._Bath 11 11
Dichelobacter_nodosus_VCS1703A 1 1
Pseudoxanthomonas_spadix_BD-a59 12 11
Pseudoxanthomonas_suwonensis_11-1 16 16
Frateuria_aurantia_DSM_6220 17 17
Stenotrophomonas_maltophilia_K279a 19 19
Xylella_fastidiosa_M23 4 4
Xanthomonas_axonopodis_pv._citri_str._306 21 20
Xanthomonas_albilineans_GPE_PC73 9 9
Xanthomonas_oryzae_pv._oryzae_PXO99A 20 19
Xanthomonas_campestris_pv._campestris_str._B100 22 22
Halothiobacillus_neapolitanus_c2 9 8
Alkalilimnicola_ehrlichii_MLHE-1 6 6
Thioalkalivibrio_sulfidophilus_HL-EbGr7 14 13
Thioalkalivibrio_sp._K90mix 6 6
Halorhodospira_halophila_SL1 3 3
Allochromatium_vinosum_DSM_180 11 11
Thiocystis_violascens_DSM_198 9 9
Nitrosococcus_watsonii_C-113 7 7
Nitrosococcus_halophilus_Nc4 8 8
Nitrosococcus_oceani_ATCC_19707 7 7
Coxiella_burnetii_Dugway_5J108-111 4 4
Legionella_longbeachae_NSW150 14 14
Legionella_pneumophila_str._Corby 10 10
gamma_proteobacterium_HdN1 7 7
Candidatus_Vesicomyosocius_okutanii_HA 1 1
Candidatus_Ruthia_magnifica_str._Cm_(Calyptogena_magnifica) 2 2
Cronobacter_turicensis_z3032 24 24
Cronobacter_sakazakii_ES15 24 24
Dickeya_zeae_Ech1591 20 20
Dickeya_dadantii_Ech703 20 20
Candidatus_Hamiltonella_defensa_5AT_(Acyrthosiphon_pisum) 1 1
Pectobacterium_wasabiae_WPP163 17 17
Pectobacterium_atrosepticum_SCRI1043 20 20
Pectobacterium_carotovorum_subsp._carotovorum_PC1 24 24
Sodalis_glossinidius_str._'morsitans' 8 8
Pantoea_sp._At-9b 45 45
Pantoea_vagans_C9-1 32 32
Pantoea_ananatis_LMG_20103 30 30
Rahnella_sp._Y9602 35 35
Rahnella_aquatilis_CIP_78.65_=_ATCC_33071 37 37
Photorhabdus_asymbiotica 14 14
Photorhabdus_luminescens_subsp._laumondii_TTO1 17 17
Edwardsiella_ictaluri_93-146 7 7
Edwardsiella_tarda_EIB202 8 8
Yersinia_pseudotuberculosis_IP_31758 17 17
Yersinia_pestis_Pestoides_F 18 18
Yersinia_enterocolitica_subsp._enterocolitica_8081 20 20
Xenorhabdus_bovienii_SS-2004 14 14
Xenorhabdus_nematophila_ATCC_19061 13 13
Shigella_sonnei_Ss046 14 14
Shigella_flexneri_5_str._8401 15 15
Shigella_dysenteriae_Sd197 13 13
Shigella_boydii_CDC_3083-94 14 14
Serratia_sp._AS12 37 37
Serratia_plymuthica_AS9 37 37
Serratia_proteamaculans_568 37 37
Salmonella_bongori_NCTC_12419 19 19
Providencia_stuartii_MRSN_2154 23 23
Proteus_mirabilis_HI4320 16 15
Klebsiella_variicola_At-22 34 34
Klebsiella_pneumoniae_NTUH-K2044 35 35
Klebsiella_oxytoca_E718 34 34
Escherichia_fergusonii_ATCC_35469 12 12
Escherichia_blattae_DSM_4481 23 23
Escherichia_coli_'BL21-Gold(DE3)pLysS_AG' 21 21
Erwinia_tasmaniensis_Et1/99 15 15
Erwinia_sp._Ejp617 9 9
Erwinia_billingiae_Eb661 26 26
Erwinia_pyrifoliae_Ep1/96 12 12
Erwinia_amylovora_ATCC_49946 11 11
Enterobacter_sp._638 25 25
Enterobacter_asburiae_LF7a 27 27
Enterobacter_cloacae_subsp._dissolvens_SDM 27 27
Enterobacter_aerogenes_KCTC_2190 34 34
Citrobacter_rodentium_ICC168 20 20
Citrobacter_koseri_ATCC_BAA-895 19 19
Azotobacter_vinelandii_DJ 25 25
Pseudomonas_brassicacearum_subsp._brassicacearum_NFM421 44 43
Pseudomonas_entomophila_L48 37 37
Pseudomonas_syringae_pv._tomato_str._DC3000 36 35
Pseudomonas_stutzeri_A1501 16 16
Pseudomonas_fulva_12-X 23 23
Pseudomonas_putida_F1 38 38
Pseudomonas_protegens_Pf-5 42 42
Pseudomonas_fluorescens_SBW25 46 45
Pseudomonas_mendocina_ymp 25 25
Pseudomonas_aeruginosa_UCBPP-PA14 52 52
Cellvibrio_japonicus_Ueda107 12 12
Psychrobacter_sp._PRwf-1 7 7
Psychrobacter_arcticus_273-4 6 5
Psychrobacter_cryohalolentis_K5 9 8
Moraxella_catarrhalis_RH4 1 1
Acinetobacter_oleivorans_DR1 20 20
Acinetobacter_calcoaceticus_PHEA-2 15 15
Acinetobacter_baumannii_ATCC_17978 16 15
Acinetobacter_sp._ADP1 16 16
Thioalkalimicrobium_cyclicum_ALM1 7 6
Methylophaga_sp._JAM1 11 11
Thiomicrospira_crunogena_XCL-2 10 9
Francisella_noatunensis_subsp._orientalis_str._Toba_04 8 8
Francisella_sp._TX077308 6 6
Francisella_philomiragia_subsp._philomiragia_ATCC_25017 9 9
Francisella_cf._novicida_3523 7 7
Francisella_novicida_U112 6 6
Francisella_tularensis_subsp._tularensis_WY96-3418 6 6
Gloeobacter_violaceus_PCC_7421 11 11
Prochlorococcus_marinus_str._MIT_9515 7 7
'Nostoc_azollae'_0708 9 9
Nostoc_punctiforme_PCC_73102 26 26
Nostoc_sp._PCC_7120 17 17
Anabaena_variabilis_ATCC_29413 16 16
Trichodesmium_erythraeum_IMS101 11 11
Acaryochloris_marina_MBIC11017 25 23
Thermosynechococcus_elongatus_BP-1 5 5
cyanobacterium_UCYN-A 3 3
Cyanothece_sp._PCC_8802 17 17
Synechocystis_sp._PCC_6803 14 14
Synechococcus_sp._CC9311 16 16
Synechococcus_elongatus_PCC_7942 15 15
Microcystis_aeruginosa_NIES-843 14 14
Cenarchaeum_symbiosum_A 1 1
Nitrosopumilus_maritimus_SCM1 6 6
Candidatus_Korarchaeum_cryptofilum_OPF8 8 8
halophilic_archaeon_DL31 13 13
Methanocella_arvoryzae_MRE50 11 10
Methanocella_conradii_HZ254 6 6
Methanocella_paludicola_SANAE 12 12
Methanosaeta_harundinacea_6Ac 8 8
Methanosaeta_thermophila_PT 3 3
Methanosaeta_concilii_GP6 8 8
Methanosalsum_zhilinae_DSM_4017 6 6
Methanohalobium_evestigatum_Z-7303 4 4
Methanococcoides_burtonii_DSM_6242 9 9
Methanosarcina_acetivorans_C2A 19 19
Methanosarcina_mazei_Go1 16 16
Methanosarcina_barkeri_str._Fusaro 16 16
Methanohalophilus_mahii_DSM_5219 8 8
Methanosphaerula_palustris_E1-9c 8 8
Methanoregula_boonei_6A8 6 6
Methanospirillum_hungatei_JF-1 10 10
Methanocorpusculum_labreanum_Z 7 7
Methanoculleus_bourgensis_MS2 9 9
Methanoculleus_marisnigri_JR1 11 11
Methanoplanus_petrolearius_DSM_11571 7 7
Methanopyrus_kandleri_AV19 2 2
Ferroglobus_placidus_DSM_10642 5 5
Archaeoglobus_profundus_DSM_5631 4 4
Archaeoglobus_veneficus_SNP6 8 8
Archaeoglobus_fulgidus_DSM_4304 6 6
Thermococcus_sp._4557 4 4
Thermococcus_onnurineus_NA1 6 6
Thermococcus_kodakarensis_KOD1 4 4
Thermococcus_gammatolerans_EJ3 4 4
Thermococcus_sibiricus_MM_739 9 9
Thermococcus_barophilus_MP 8 8
Pyrococcus_sp._ST04 5 5
Pyrococcus_yayanosii_CH1 6 6
Pyrococcus_horikoshii_OT3 5 5
Pyrococcus_abyssi_GE5 5 5
Pyrococcus_furiosus_COM1 5 5
Thermoplasma_volcanium_GSS1 3 3
Thermoplasma_acidophilum_DSM_1728 2 2
Picrophilus_torridus_DSM_9790 4 4
Halopiger_xanaduensis_SH-6 13 13
Halalkalicoccus_jeotgali_B3 13 13
Haloquadratum_walsbyi_DSM_16790 3 3
Halomicrobium_mukohataei_DSM_12286 9 9
Halorhabdus_utahensis_DSM_12940 3 3
Haloterrigena_turkmenica_DSM_5511 18 18
Natrinema_sp._J7-2 11 11
Natronomonas_pharaonis_DSM_2160 11 11
Natrialba_magadii_ATCC_43099 15 15
Halogeometricum_borinquense_DSM_11551 9 9
Halorubrum_lacusprofundi_ATCC_49239 13 13
Haloferax_mediterranei_ATCC_33500 8 8
Haloferax_volcanii_DS2 13 13
Halobacterium_salinarum_R1 3 3
Halobacterium_sp._NRC-1 3 3
Haloarcula_hispanica_ATCC_33960 16 16
Haloarcula_marismortui_ATCC_43049 15 15
Methanotorris_igneus_Kol_5 5 5
Methanocaldococcus_sp._FS406-22 3 3
Methanocaldococcus_fervens_AG86 3 3
Methanocaldococcus_vulcanius_M7 2 2
methanocaldococcus_infernus_ME 2 2
Methanocaldococcus_jannaschii_DSM_2661 2 2
Methanothermococcus_okinawensis_IH1 3 3
Methanococcus_aeolicus_Nankai-3 3 3
Methanococcus_maripaludis_C5 5 5
Methanococcus_voltae_A3 4 4
Methanococcus_vannielii_SB 5 5
Methanothermus_fervidus_DSM_2088 4 4
Methanothermobacter_marburgensis_str._Marburg 7 7
Methanothermobacter_thermautotrophicus_str._Delta_H 8 8
Methanosphaera_stadtmanae_DSM_3091 4 4
Methanobrevibacter_ruminantium_M1 6 6
Methanobrevibacter_smithii_ATCC_35061 4 4
Methanobacterium_sp._AL-21 9 9
Aciduliprofundum_boonei_T469 4 4
Acidilobus_saccharovorans_345-15 2 2
Pyrolobus_fumarii_1A 2 2
Hyperthermus_butylicus_DSM_5456 1 1
Thermogladius_cellulolyticus_1633 1 1
Ignisphaera_aggregans_DSM_17230 1 1
Aeropyrum_pernix_K1 2 2
Ignicoccus_hospitalis_KIN4/I 3 3
Thermosphaera_aggregans_DSM_11486 1 1
Staphylothermus_hellenicus_DSM_12710 3 3
Staphylothermus_marinus_F1 1 1
Desulfurococcus_mucosus_DSM_2162 1 1
Metallosphaera_cuprina_Ar-4 4 4
Metallosphaera_sedula_DSM_5348 5 5
Acidianus_hospitalis_W1 3 3
Sulfolobus_tokodaii_str._7 5 5
Sulfolobus_islandicus_Y.N.15.51 6 6
Sulfolobus_solfataricus_P2 6 6
Sulfolobus_acidocaldarius_DSM_639 5 5
Thermofilum_pendens_Hrk_5 2 2
Vulcanisaeta_moutnovskia_768-28 4 4
Vulcanisaeta_distributa_DSM_14429 5 5
Caldivirga_maquilingensis_IC-167 8 8
Pyrobaculum_sp._1860 4 4
Pyrobaculum_calidifontis_JCM_11548 2 2
Pyrobaculum_arsenaticum_DSM_13514 3 3
Pyrobaculum_oguniense_TE7 3 3
Thermoproteus_neutrophilus_V24Sta 2 2
Pyrobaculum_aerophilum_str._IM2 3 3
Pyrobaculum_islandicum_DSM_4184 2 2
Thermoproteus_uzoniensis_768-20 2 2
Thermoproteus_tenax_Kra_1 3 3

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Strains
Genome     Number   Proteins
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Western clawed frog)   33 27
Drosophila_melanogaster_FlyBase_5.12_(FlyBase)   (Fruit fly)   5 5
Anopheles_gambiae_VectorBase_AgamP3.6__(VectorBase)   (African malaria mosquito)   6 6
Ascaris_suum_Victoria/Ghent_   (Pig roundworm)   10 10
Caenorhabditis_elegans_WormBase_WS218__(WormBase)   (Nematode)   10 10
Cryptococcus_neoformans_var._grubii_H99_ 16 15
Cryptococcus_neoformans_B-3501A_ 16 15
Cryptococcus_neoformans_JEC21_ 13 12
Ajellomyces_dermatitidis_ER-3_ 13 13
Histoplasma_capsulatum_H143 14 14
Histoplasma_capsulatum_H88 13 13
Histoplasma_capsulatum_G186AR 14 14
Paracoccidioides_brasiliensis_Pb01_ 11 11
Paracoccidioides_brasiliensis_Pb03_ 11 11
Coccidioides_posadasii_str._Silveira_ 14 14
Coccidioides_immitis_RMSCC_3703_ 14 14
Coccidioides_immitis_RMSCC_2394_ 14 14
Coccidioides_immitis_H538.4_ 13 13
Aspergillus_fumigatus_A1163_ 29 29
Candida_albicans_WO-1_ 11 11
Saccharomyces_cerevisiae_UC5 5 5
Saccharomyces_cerevisiae_PW5 5 5
Saccharomyces_cerevisiae_FL100 3 3
Saccharomyces_cerevisiae_CLIB324 4 4
Saccharomyces_cerevisiae_CBS7960 5 5
Saccharomyces_cerevisiae_YJM269 5 5
Saccharomyces_cerevisiae_T7 5 5
Saccharomyces_cerevisiae_FostersB 5 5
Saccharomyces_cerevisiae_FostersO 3 3
Saccharomyces_cerevisiae_VL3 5 5
Saccharomyces_cerevisiae_Vin13 5 5
Saccharomyces_cerevisiae_LalvinQA23 6 6
Saccharomyces_cerevisiae_AWRI796 5 5
Saccharomyces_cerevisiae_Sigma1278b 5 5
Saccharomyces_cerevisiae_W303 5 5
Saccharomyces_cerevisiae_JAY291 5 5
Saccharomyces_cerevisiae_AWRI1631 4 4
Saccharomyces_cerevisiae_YPS163 3 3
Saccharomyces_cerevisiae_M22 3 3
Saccharomyces_cerevisiae_T73 5 5
Saccharomyces_cerevisiae_CLIB215 5 5
Saccharomyces_cerevisiae_Y10 3 3
Saccharomyces_cerevisiae_YJM789_ 5 5
Saccharomyces_cerevisiae_YJM789 5 5
Saccharomyces_cerevisiae_RM11-1a 5 5
Saccharomyces_cerevisiae_RM11-1a_ 5 5
Saccharomyces_cerevisiae_SGD_(SGD)   (Baker's yeast)   5 5
Schizosaccharomyces_pombe_972h-_ 4 4
Batrachochytrium_dendrobatidis_JEL423_ 10 10
Batrachochytrium_dendrobatidis_JAM81_ 13 13
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   80 76
Oryza_sativa_ssp._Indica_(Subspecies)   (Indian rice)   127 124
Trypanosoma_brucei_Lister_427_v4.1 5 5
Plasmodium_falciparum_HB3_ 2 2
Plasmodium_falciparum_Dd2_ 1 1
Neospora_caninum_Nc-Liverpool_6.2 3 3
Mycoplasma_leachii_PG50 1 1
Mycoplasma_mycoides_subsp._mycoides_SC_str._PG1 1 1
Mycoplasma_bovis_Hubei-1 1 1
Mycoplasma_bovis_PG45 1 1
Mycoplasma_fermentans_JER 1 1
Mycoplasma_agalactiae 1 1
Mycoplasma_hyorhinis_MCLD 1 1
Mycoplasma_hyorhinis_HUB-1 1 1
Mycoplasma_hyopneumoniae_232 2 2
Mycoplasma_hyopneumoniae_7448 2 2
Mycoplasma_hyopneumoniae_J 2 2
Mycoplasma_gallisepticum_str._R(high) 1 1
Mycoplasma_gallisepticum_str._R(low) 1 1
Leptospira_borgpetersenii_serovar_Hardjo-bovis_str._JB197 8 8
Leptospira_interrogans_serovar_Lai_str._56601 14 14
Leptospira_interrogans_serovar_Copenhageni_str._Fiocruz_L1-130 14 14
Leptospira_biflexa_serovar_Patoc_strain_'Patoc_1_(Ames)' 11 11
Spirochaeta_thermophila_DSM_6578 5 5
Borrelia_garinii_BgVir 1 1
Borrelia_afzelii_PKo 1 1
Borrelia_burgdorferi_JD1 1 1
Borrelia_burgdorferi_N40 1 1
Borrelia_burgdorferi_ZS7 1 1
Gardnerella_vaginalis_HMP9231 2 2
Gardnerella_vaginalis_ATCC_14019 2 2
Bifidobacterium_longum_NCC2705 2 2
Bifidobacterium_longum_DJO10A 3 3
Bifidobacterium_longum_subsp._infantis_157F 2 2
Bifidobacterium_longum_subsp._infantis_ATCC_15697_=_JCM_1222 2 2
Bifidobacterium_longum_subsp._infantis_ATCC_15697_=_JCM_1222 2 2
Bifidobacterium_longum_subsp._longum_KACC_91563 2 2
Bifidobacterium_longum_subsp._longum_BBMN68 2 2
Bifidobacterium_longum_subsp._longum_JCM_1217 2 2
Bifidobacterium_animalis_subsp._animalis_ATCC_25527 4 4
Bifidobacterium_animalis_subsp._lactis_B420 4 4
Bifidobacterium_animalis_subsp._lactis_BLC1 4 4
Bifidobacterium_animalis_subsp._lactis_CNCM_I-2494 4 4
Bifidobacterium_animalis_subsp._lactis_Bi-07 4 4
Bifidobacterium_animalis_subsp._lactis_V9 4 4
Bifidobacterium_animalis_subsp._lactis_DSM_10140 4 4
Bifidobacterium_animalis_subsp._lactis_BB-12 4 4
Bifidobacterium_animalis_subsp._lactis_AD011 4 4
Bifidobacterium_bifidum_PRL2010 3 3
Bifidobacterium_bifidum_BGN4 2 2
Frankia_sp._EuI1c 39 39
Frankia_sp._CcI3 13 13
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 37 37
Amycolatopsis_mediterranei_S699 42 41
Amycolatopsis_mediterranei_S699 42 41
Propionibacterium_acnes_TypeIA2_P.acn31 6 6
Propionibacterium_acnes_TypeIA2_P.acn17 6 6
Propionibacterium_acnes_TypeIA2_P.acn33 6 6
Propionibacterium_acnes_ATCC_11828 6 6
Propionibacterium_acnes_6609 5 5
Propionibacterium_acnes_266 5 5
Propionibacterium_acnes_KPA171202 5 5
Mycobacterium_sp._MOTT36Y 20 20
Mycobacterium_sp._JDM601 12 12
Mycobacterium_sp._KMS 24 24
Mycobacterium_sp._MCS 22 22
Mycobacterium_intracellulare_MOTT-64 23 23
Mycobacterium_intracellulare_MOTT-02 21 21
Mycobacterium_avium_subsp._paratuberculosis_K-10 14 14
Mycobacterium_tuberculosis_UT205 8 8
Mycobacterium_tuberculosis_RGTB423 7 7
Mycobacterium_tuberculosis_RGTB327 4 4
Mycobacterium_tuberculosis_CTRI-2 8 8
Mycobacterium_tuberculosis_KZN_605 8 8
Mycobacterium_tuberculosis_KZN_4207 8 8
Mycobacterium_tuberculosis_CCDC5180 8 8
Mycobacterium_tuberculosis_CCDC5079 8 8
Mycobacterium_tuberculosis_H37Ra 8 8
Mycobacterium_tuberculosis_F11 8 8
Mycobacterium_tuberculosis_H37Rv 8 8
Mycobacterium_tuberculosis_H37Rv 8 8
Mycobacterium_tuberculosis_CDC1551 7 7
Mycobacterium_bovis_AF2122/97 8 8
Mycobacterium_bovis_BCG_str._Mexico 8 8
Mycobacterium_bovis_BCG_str._Tokyo_172 8 8
Mycobacterium_gilvum_Spyr1 24 24
Mycobacterium_smegmatis_str._MC2_155 39 38
Mycobacterium_leprae_TN 2 2
Corynebacterium_ulcerans_BR-AD22 4 4
Corynebacterium_ulcerans_809 4 4
Corynebacterium_pseudotuberculosis_258 4 4
Corynebacterium_pseudotuberculosis_Cp162 3 3
Corynebacterium_pseudotuberculosis_P54B96 4 4
Corynebacterium_pseudotuberculosis_267 4 4
Corynebacterium_pseudotuberculosis_1/06-A 3 3
Corynebacterium_pseudotuberculosis_42/02-A 4 4
Corynebacterium_pseudotuberculosis_3/99-5 4 4
Corynebacterium_pseudotuberculosis_31 4 4
Corynebacterium_pseudotuberculosis_CIP_52.97 4 4
Corynebacterium_pseudotuberculosis_PAT10 4 4
Corynebacterium_pseudotuberculosis_I19 4 4
Corynebacterium_pseudotuberculosis_FRC41 4 4
Corynebacterium_pseudotuberculosis_C231 4 4
Corynebacterium_pseudotuberculosis_1002 4 4
Corynebacterium_glutamicum_ATCC_13032 13 13
Corynebacterium_glutamicum_ATCC_13032 12 12
Corynebacterium_diphtheriae_BH8 4 4
Corynebacterium_diphtheriae_INCA_402 3 3
Corynebacterium_diphtheriae_VA01 3 3
Corynebacterium_diphtheriae_HC04 3 3
Corynebacterium_diphtheriae_HC03 4 4
Corynebacterium_diphtheriae_HC02 3 3
Corynebacterium_diphtheriae_HC01 3 3
Corynebacterium_diphtheriae_241 3 3
Corynebacterium_diphtheriae_CDCE_8392 3 3
Corynebacterium_diphtheriae_PW8 3 3
Corynebacterium_diphtheriae_C7_(beta) 4 4
Corynebacterium_diphtheriae_31A 4 4
Tropheryma_whipplei_str._Twist 2 2
Clavibacter_michiganensis_subsp._sepedonicus 4 4
Actinomyces_graevenitzii_C83_ 4 4
Actinomyces_odontolyticus_ATCC_17982 6 6
Actinomyces_viscosus_C505 4 4
Hydrogenobacter_thermophilus_TK-6 4 4
Fibrobacter_succinogenes_subsp._succinogenes_S85 8 8
Chlorobium_phaeobacteroides_BS1 9 9
Salinibacter_ruber_DSM_13855 5 5
Rhodothermus_marinus_SG0.5JP17-172 5 5
Porphyromonas_gingivalis_TDC60 3 3
Porphyromonas_gingivalis_W83 3 3
Bacteroides_fragilis_638R 28 27
Bacteroides_fragilis_NCTC_9343 21 21
Riemerella_anatipestifer_RA-GD 4 4
Riemerella_anatipestifer_ATCC_11845_=_DSM_15868 4 4
Thermus_thermophilus_JL-18 5 5
Thermus_thermophilus_SG0.5JP17-16 6 6
Thermus_thermophilus_HB8 4 4
Sulfobacillus_acidophilus_TPY 14 14
Desulfitobacterium_hafniense_DCB-2 22 22
Clostridium_difficile_BI1 18 18
Clostridium_difficile_R20291 17 17
Clostridium_difficile_CD196 17 17
Candidatus_Arthromitus_sp._SFB-rat-Yit 3 3
Candidatus_Arthromitus_sp._SFB-mouse-Yit 3 3
Clostridium_sp._SY8519 10 10
Clostridium_kluyveri_NBRC_12016 12 12
Clostridium_thermocellum_DSM_1313 8 8
Clostridium_perfringens_SM101 7 7
Clostridium_perfringens_str._13 8 8
Clostridium_botulinum_H04402_065 14 14
Clostridium_botulinum_BKT015925 8 8
Clostridium_botulinum_F_str._230613 14 14
Clostridium_botulinum_F_str._Langeland 15 15
Clostridium_botulinum_E3_str._Alaska_E43 8 8
Clostridium_botulinum_B1_str._Okra 17 17
Clostridium_botulinum_Ba4_str._657 14 14
Clostridium_botulinum_B_str._Eklund_17B 10 10
Clostridium_botulinum_A2_str._Kyoto 14 14
Clostridium_botulinum_A3_str._Loch_Maree 15 15
Clostridium_botulinum_A_str._Hall 16 16
Clostridium_botulinum_A_str._ATCC_19397 15 15
Clostridium_acetobutylicum_DSM_1731 7 7
Clostridium_acetobutylicum_EA_2018 7 7
Thermoanaerobacter_sp._X513 3 3
Melissococcus_plutonius_ATCC_35311 5 5
Enterococcus_faecium_DO 11 11
Enterococcus_faecalis_D32 10 10
Enterococcus_faecalis_OG1RF 10 10
Enterococcus_faecalis_V583 11 11
Leuconostoc_mesenteroides_subsp._mesenteroides_J18 2 2
Lactobacillus_casei_LC2W 8 8
Lactobacillus_casei_BD-II 8 8
Lactobacillus_casei_BL23 8 8
Lactobacillus_casei_str._Zhang 7 7
Lactobacillus_rhamnosus_ATCC_8530 6 6
Lactobacillus_rhamnosus_GG 7 7
Lactobacillus_rhamnosus_GG 7 7
Lactobacillus_johnsonii_DPC_6026 3 3
Lactobacillus_johnsonii_NCC_533 6 6
Lactobacillus_salivarius_UCC118 3 3
Lactobacillus_fermentum_CECT_5716 2 2
Lactobacillus_amylovorus_GRL_1112 4 4
Lactobacillus_reuteri_JCM_1112 1 1
Lactobacillus_reuteri_SD2112 4 4
Lactobacillus_plantarum_subsp._plantarum_ST-III 8 8
Lactobacillus_plantarum_WCFS1 9 9
Lactobacillus_helveticus_H10 3 3
Lactobacillus_delbrueckii_subsp._bulgaricus_ND02 3 3
Lactobacillus_delbrueckii_subsp._bulgaricus_ATCC_11842 2 2
Lactobacillus_delbrueckii_subsp._bulgaricus_2038 2 2
Lactobacillus_acidophilus_NCFM 4 4
Lactococcus_garvieae_Lg2 3 3
Lactococcus_lactis_subsp._lactis_CV56 4 4
Lactococcus_lactis_subsp._lactis_KF147 3 3
Lactococcus_lactis_subsp._lactis_Il1403 3 3
Lactococcus_lactis_subsp._cremoris_A76 6 6
Lactococcus_lactis_subsp._cremoris_NZ9000 4 4
Lactococcus_lactis_subsp._cremoris_SK11 5 5
Streptococcus_gallolyticus_subsp._gallolyticus_ATCC_BAA-2069 5 5
Streptococcus_gallolyticus_subsp._gallolyticus_ATCC_43143 4 4
Streptococcus_equi_subsp._zooepidemicus_MGCS10565 4 4
Streptococcus_equi_subsp._zooepidemicus 4 4
Streptococcus_dysgalactiae_subsp._equisimilis_ATCC_12394 6 6
Streptococcus_parasanguinis_FW213 4 4
Streptococcus_pyogenes_MGAS1882 5 5
Streptococcus_pyogenes_MGAS15252 5 5
Streptococcus_pyogenes_Alab49 5 5
Streptococcus_pyogenes_MGAS10750 5 5
Streptococcus_pyogenes_MGAS10270 5 5
Streptococcus_pyogenes_MGAS2096 6 6
Streptococcus_pyogenes_MGAS9429 5 5
Streptococcus_pyogenes_MGAS6180 5 5
Streptococcus_pyogenes_NZ131 5 5
Streptococcus_pyogenes_MGAS8232 5 5
Streptococcus_pyogenes_MGAS10394 5 5
Streptococcus_pyogenes_MGAS315 5 5
Streptococcus_pyogenes_SSI-1 5 5
Streptococcus_pyogenes_MGAS5005 5 5
Streptococcus_pyogenes_M1_GAS 5 5
Streptococcus_pneumoniae_ST556 3 3
Streptococcus_pneumoniae_INV104 3 3
Streptococcus_pneumoniae_INV200 2 2
Streptococcus_pneumoniae_OXC141 2 2
Streptococcus_pneumoniae_AP200 2 2
Streptococcus_pneumoniae_ATCC_700669 3 3
Streptococcus_pneumoniae_TCH8431/19A 3 3
Streptococcus_pneumoniae_CGSP14 2 2
Streptococcus_pneumoniae_G54 3 3
Streptococcus_pneumoniae_JJA 2 2
Streptococcus_pneumoniae_70585 3 3
Streptococcus_pneumoniae_Hungary19A-6 3 3
Streptococcus_pneumoniae_Taiwan19F-14 3 3
Streptococcus_pneumoniae_D39 3 3
Streptococcus_pneumoniae_670-6B 3 3
Streptococcus_pneumoniae_R6 3 3
Streptococcus_pneumoniae_TIGR4 3 3
Streptococcus_agalactiae_NEM316 6 6
Streptococcus_agalactiae_2603V/R 4 4
Streptococcus_mutans_GS-5 5 5
Streptococcus_mutans_LJ23 5 5
Streptococcus_mutans_UA159 5 5
Streptococcus_thermophilus_MN-ZLW-002 6 6
Streptococcus_thermophilus_JIM_8232 4 4
Streptococcus_thermophilus_ND03 5 5
Streptococcus_thermophilus_CNRZ1066 4 4
Streptococcus_thermophilus_LMG_18311 4 4
Streptococcus_suis_ST3 2 2
Streptococcus_suis_D9 2 2
Streptococcus_suis_SS12 2 2
Streptococcus_suis_D12 2 2
Streptococcus_suis_ST1 2 2
Streptococcus_suis_A7 2 2
Streptococcus_suis_JS14 2 2
Streptococcus_suis_BM407 2 2
Streptococcus_suis_SC84 2 2
Streptococcus_suis_GZ1 2 2
Streptococcus_suis_98HAH33 2 2
Streptococcus_suis_05ZYH33 2 2
Streptococcus_salivarius_CCHSS3 3 3
Streptococcus_salivarius_JIM8777 3 3
Alicyclobacillus_acidocaldarius_subsp._acidocaldarius_Tc-4-1 8 8
Paenibacillus_sp._Y412MC10 28 28
Paenibacillus_mucilaginosus_KNP414 28 28
Paenibacillus_mucilaginosus_K02 25 25
Paenibacillus_polymyxa_SC2 26 26
Paenibacillus_polymyxa_E681 25 25
Listeria_monocytogenes_07PF0776 7 7
Listeria_monocytogenes_M7 7 7
Listeria_monocytogenes_08-5578 8 8
Listeria_monocytogenes_08-5923 8 8
Listeria_monocytogenes_L99 7 7
Listeria_monocytogenes_HCC23 7 7
Listeria_monocytogenes_10403S 8 8
Listeria_monocytogenes_J0161 9 9
Listeria_monocytogenes_Finland_1998 8 8
Listeria_monocytogenes_FSL_R2-561 8 8
Listeria_monocytogenes_serotype_4b_str._F2365 7 7
Listeria_monocytogenes_EGD-e 8 8
Geobacillus_sp._C56-T3 8 8
Geobacillus_sp._Y4.1MC1 9 9
Geobacillus_sp._Y412MC52 7 7
Geobacillus_sp._Y412MC61 7 7
Bacillus_subtilis_BSn5 17 17
Bacillus_subtilis_subsp._subtilis_str._RO-NN-1 16 16
Bacillus_subtilis_subsp._spizizenii_TU-B-10 17 17
Bacillus_subtilis_subsp._spizizenii_str._W23 17 17
Bacillus_licheniformis_DSM_13_=_ATCC_14580 13 13
Bacillus_amyloliquefaciens_Y2 16 16
Bacillus_amyloliquefaciens_DSM_7 15 15
Bacillus_amyloliquefaciens_subsp._plantarum_YAU_B9601-Y2 16 16
Bacillus_amyloliquefaciens_subsp._plantarum_CAU_B946 15 15
Bacillus_amyloliquefaciens_XH7 15 15
Bacillus_amyloliquefaciens_LL3 14 14
Bacillus_amyloliquefaciens_TA208 14 14
Bacillus_cereus_subsp._cytotoxis_NVH_391-98 7 7
Bacillus_thuringiensis_serovar_chinensis_CT-43 20 20
Bacillus_thuringiensis_serovar_konkukian_str._97-27 17 17
Bacillus_thuringiensis_BMB171 21 21
Bacillus_thuringiensis_serovar_finitimus_YBT-020 17 17
Bacillus_cereus_biovar_anthracis_str._CI 17 17
Bacillus_cereus_AH820 20 20
Bacillus_cereus_AH187 17 17
Bacillus_cereus_B4264 17 17
Bacillus_cereus_G9842 18 18
Bacillus_cereus_Q1 19 19
Bacillus_cereus_F837/76 19 19
Bacillus_cereus_NC7401 18 18
Bacillus_cereus_E33L 19 19
Bacillus_cereus_ATCC_14579 15 15
Bacillus_cereus_ATCC_10987 16 16
Bacillus_anthracis_str._H9401 16 16
Bacillus_anthracis_str._CDC_684 16 16
Bacillus_anthracis_str._'Ames_Ancestor' 16 16
Bacillus_anthracis_str._Sterne 16 16
Bacillus_anthracis_str._Ames 16 16
Bacillus_megaterium_WSH-002 21 21
Bacillus_megaterium_QM_B1551 21 21
Bacillus_coagulans_36D1 7 7
Staphylococcus_pseudintermedius_ED99 4 4
Staphylococcus_lugdunensis_N920143 6 6
Staphylococcus_epidermidis_ATCC_12228 4 4
Staphylococcus_aureus_04-02981 5 5
Staphylococcus_aureus_RF122 5 5
Staphylococcus_aureus_subsp._aureus_11819-97 5 5
Staphylococcus_aureus_subsp._aureus_M013 5 5
Staphylococcus_aureus_subsp._aureus_HO_5096_0412 5 5
Staphylococcus_aureus_subsp._aureus_VC40 5 5
Staphylococcus_aureus_subsp._aureus_T0131 5 5
Staphylococcus_aureus_subsp._aureus_LGA251 5 5
Staphylococcus_aureus_subsp._aureus_MSHR1132 5 5
Staphylococcus_aureus_subsp._aureus_ECT-R_2 5 5
Staphylococcus_aureus_subsp._aureus_JKD6159 5 5
Staphylococcus_aureus_subsp._aureus_ED133 4 4
Staphylococcus_aureus_subsp._aureus_ED98 5 5
Staphylococcus_aureus_subsp._aureus_TW20 5 5
Staphylococcus_aureus_subsp._aureus_TCH60 5 5
Staphylococcus_aureus_subsp._aureus_str._JKD6008 5 5
Staphylococcus_aureus_subsp._aureus_71193 5 5
Staphylococcus_aureus_subsp._aureus_S0385 5 5
Staphylococcus_aureus_subsp._aureus_str._Newman 5 5
Staphylococcus_aureus_subsp._aureus_Mu3 5 5
Staphylococcus_aureus_subsp._aureus_USA300_TCH1516 5 5
Staphylococcus_aureus_subsp._aureus_USA300_FPR3757 5 5
Staphylococcus_aureus_subsp._aureus_JH9 5 5
Staphylococcus_aureus_subsp._aureus_MSSA476 5 5
Staphylococcus_aureus_subsp._aureus_MRSA252 5 5
Staphylococcus_aureus_subsp._aureus_MW2 5 5
Staphylococcus_aureus_subsp._aureus_N315 5 5
Staphylococcus_aureus_subsp._aureus_Mu50 5 5
Staphylococcus_aureus_subsp._aureus_COL 5 5
Staphylococcus_aureus_subsp._aureus_NCTC_8325 5 5
Arcobacter_butzleri_ED-1 9 9
Campylobacter_jejuni_RM1221 2 2
Campylobacter_jejuni_subsp._jejuni_ICDCCJ07001 3 3
Campylobacter_jejuni_subsp._jejuni_S3 2 2
Campylobacter_jejuni_subsp._jejuni_M1 4 4
Campylobacter_jejuni_subsp._jejuni_IA3902 2 2
Campylobacter_jejuni_subsp._jejuni_81116 4 4
Campylobacter_jejuni_subsp._jejuni_81-176 2 2
Campylobacter_jejuni_subsp._jejuni_NCTC_11168_=_ATCC_700819 2 2
Helicobacter_cetorum_MIT_99-5656 1 1
Helicobacter_pylori_HUP-B14 2 2
Helicobacter_pylori_PeCan18 2 2
Helicobacter_pylori_Shi169 2 2
Helicobacter_pylori_Shi112 2 2
Helicobacter_pylori_Shi417 2 2
Helicobacter_pylori_XZ274 2 2
Helicobacter_pylori_SNT49 2 2
Helicobacter_pylori_Puno135 2 2
Helicobacter_pylori_Puno120 2 2
Helicobacter_pylori_ELS37 2 2
Helicobacter_pylori_Gambia94/24 2 2
Helicobacter_pylori_SouthAfrica7 2 2
Helicobacter_pylori_India7 2 2
Helicobacter_pylori_Lithuania75 2 2
Helicobacter_pylori_2017 2 2
Helicobacter_pylori_2018 2 2
Helicobacter_pylori_908 2 2
Helicobacter_pylori_F57 2 2
Helicobacter_pylori_F30 2 2
Helicobacter_pylori_F16 2 2
Helicobacter_pylori_Sat464 2 2
Helicobacter_pylori_Cuz20 2 2
Helicobacter_pylori_PeCan4 2 2
Helicobacter_pylori_SJM180 2 2
Helicobacter_pylori_B8 2 2
Helicobacter_pylori_52 2 2
Helicobacter_pylori_v225d 2 2
Helicobacter_pylori_83 2 2
Helicobacter_pylori_35A 2 2
Helicobacter_pylori_P12 2 2
Helicobacter_pylori_G27 2 2
Helicobacter_pylori_Shi470 2 2
Helicobacter_pylori_HPAG1 2 2
Helicobacter_pylori_51 2 2
Helicobacter_pylori_F32 2 2
Helicobacter_pylori_J99 2 2
Helicobacter_pylori_26695 2 2
Desulfovibrio_vulgaris_RCH1 7 7
Desulfovibrio_vulgaris_str._'Miyazaki_F' 12 12
Desulfovibrio_vulgaris_str._Hildenborough 7 7
Desulfovibrio_desulfuricans_ND132 16 16
Geobacter_sp._M18 15 15
Geobacter_sulfurreducens_PCA 11 11
Anaeromyxobacter_sp._K 18 18
Anaeromyxobacter_dehalogenans_2CP-C 17 17
Neisseria_meningitidis_WUE_2594 5 5
Neisseria_meningitidis_G2136 4 4
Neisseria_meningitidis_M04-240196 4 4
Neisseria_meningitidis_M01-240149 4 4
Neisseria_meningitidis_NZ-05/33 4 4
Neisseria_meningitidis_M01-240355 4 4
Neisseria_meningitidis_8013 4 4
Neisseria_meningitidis_053442 5 5
Neisseria_meningitidis_Z2491 5 5
Neisseria_meningitidis_H44/76 4 4
Neisseria_meningitidis_alpha710 4 4
Neisseria_meningitidis_MC58 3 3
Neisseria_gonorrhoeae_TCDC-NG08107 3 3
Neisseria_gonorrhoeae_FA_1090 2 2
Ralstonia_pickettii_12J 31 31
Ralstonia_solanacearum_Po82 31 30
Ralstonia_solanacearum_PSI07 32 32
Ralstonia_solanacearum_GMI1000 31 30
Polynucleobacter_necessarius_subsp._necessarius_STIR1 3 3
Burkholderia_sp._YI23 60 60
Burkholderia_sp._CCGE1003 51 51
Burkholderia_sp._CCGE1001 52 51
Burkholderia_sp._KJ006 50 50
Burkholderia_pseudomallei_1026b 38 38
Burkholderia_pseudomallei_MSHR346 17 17
Burkholderia_pseudomallei_668 38 38
Burkholderia_pseudomallei_1710b 36 36
Burkholderia_pseudomallei_K96243 38 38
Burkholderia_mallei_NCTC_10229 32 32
Burkholderia_mallei_NCTC_10247 26 26
Burkholderia_mallei_ATCC_23344 27 27
Burkholderia_sp._383 75 75
Burkholderia_ambifaria_MC40-6 60 59
Burkholderia_cenocepacia_MC0-3 64 64
Burkholderia_cenocepacia_AU_1054 61 61
Burkholderia_cenocepacia_J2315 67 67
Burkholderia_multivorans_ATCC_17616 48 48
Alicycliphilus_denitrificans_BC 17 17
Variovorax_paradoxus_EPS 34 34
Taylorella_equigenitalis_ATCC_35865 2 2
Bordetella_pertussis_CS 26 25
Nitrosomonas_sp._AL212 7 7
Caulobacter_crescentus_CB15 12 12
Zymomonas_mobilis_subsp._mobilis_ATCC_29191 3 3
Zymomonas_mobilis_subsp._mobilis_ATCC_10988 4 4
Zymomonas_mobilis_subsp._mobilis_ZM4 3 3
Zymomonas_mobilis_subsp._pomaceae_ATCC_29192 6 6
Phaeobacter_gallaeciensis_DSM_17395 21 21
Rhodobacter_sphaeroides_KD131 20 20
Rhodobacter_sphaeroides_ATCC_17025 9 9
Rhodobacter_sphaeroides_2.4.1 23 23
Rhodospirillum_rubrum_ATCC_11170 15 15
Gluconacetobacter_diazotrophicus_PAl_5 17 17
Acetobacter_pasteurianus_IFO_3283-12 6 6
Acetobacter_pasteurianus_IFO_3283-01-42C 6 6
Acetobacter_pasteurianus_IFO_3283-32 6 6
Acetobacter_pasteurianus_IFO_3283-26 6 6
Acetobacter_pasteurianus_IFO_3283-22 6 6
Acetobacter_pasteurianus_IFO_3283-07 6 6
Acetobacter_pasteurianus_IFO_3283-03 6 6
Candidatus_Pelagibacter_ubique_HTCC1062 7 7
Wolbachia_endosymbiont_of_Drosophila_melanogaster 1 1
Methylobacterium_extorquens_DM4 22 22
Methylobacterium_extorquens_PA1 22 22
Brucella_canis_HSK_A52141 13 13
Brucella_suis_VBI22 12 12
Brucella_suis_1330 12 12
Brucella_suis_1330 12 12
Brucella_melitensis_NI 13 13
Brucella_melitensis_M5-90 13 13
Brucella_melitensis_M28 13 13
Brucella_melitensis_bv._1_str._16M 13 13
Brucella_abortus_A13334 12 12
Brucella_melitensis_biovar_Abortus_2308 12 12
Brucella_abortus_bv._1_str._9-941 13 13
Sinorhizobium_fredii_USDA_257 47 47
Sinorhizobium_fredii_HH103 44 44
Sinorhizobium_meliloti_SM11 43 42
Sinorhizobium_meliloti_BL225C 43 42
Sinorhizobium_meliloti_1021 41 40
Rhizobium_etli_CFN_42 44 43
Rhizobium_leguminosarum_bv._trifolii_WSM2304 47 45
Rhizobium_leguminosarum_bv._trifolii_WSM1325 48 48
Candidatus_Liberibacter_solanacearum_CLso-ZC1 1 1
Oligotropha_carboxidovorans_OM5 18 18
Oligotropha_carboxidovorans_OM5 18 18
Rhodopseudomonas_palustris_DX-1 23 23
Rhodopseudomonas_palustris_TIE-1 27 27
Rhodopseudomonas_palustris_HaA2 18 18
Rhodopseudomonas_palustris_BisB5 14 14
Rhodopseudomonas_palustris_BisB18 25 25
Rhodopseudomonas_palustris_CGA009 25 25
Bradyrhizobium_sp._S23321 41 41
Bradyrhizobium_sp._BTAi1 36 36
Bradyrhizobium_japonicum_USDA_6 59 58
Acidithiobacillus_ferrooxidans_ATCC_23270 14 13
Aggregatibacter_actinomycetemcomitans_ANH9381 4 4
Haemophilus_somnus_2336 4 4
Pasteurella_multocida_36950 8 8
Pasteurella_multocida_subsp._multocida_str._HN06 5 5
Pasteurella_multocida_subsp._multocida_str._Pm70 5 5
Haemophilus_influenzae_10810 1 1
Actinobacillus_pleuropneumoniae_serovar_3_str._JL03 2 2
Actinobacillus_pleuropneumoniae_serovar_7_str._AP76 3 3
Vibrio_fischeri_ES114 17 16
Vibrio_sp._EJY3 32 31
Vibrio_vulnificus_CMCP6 13 13
Vibrio_vulnificus_YJ016 16 16
Vibrio_cholerae_LMA3984-4 9 9
Vibrio_cholerae_M66-2 13 13
Vibrio_cholerae_O395 12 12
Vibrio_cholerae_IEC224 13 13
Vibrio_cholerae_O1_str._2010EL-1786 13 13
Vibrio_cholerae_MJ-1236 12 12
Vibrio_cholerae_O1_biovar_El_Tor_str._N16961 13 13
Shewanella_sp._W3-18-1 19 18
Shewanella_sp._ANA-3 21 21
Shewanella_baltica_BA175 23 22
Shewanella_baltica_OS678 22 21
Shewanella_baltica_OS117 21 20
Shewanella_baltica_OS223 22 21
Shewanella_baltica_OS195 22 21
Shewanella_baltica_OS155 22 21
Shewanella_sp._MR-7 16 16
Shewanella_putrefaciens_200 22 21
Stenotrophomonas_maltophilia_D457 17 17
Stenotrophomonas_maltophilia_JV3 17 17
Stenotrophomonas_maltophilia_R551-3 23 23
Xylella_fastidiosa_subsp._fastidiosa_GB514 4 4
Xylella_fastidiosa_M12 4 4
Xylella_fastidiosa_Temecula1 4 4
Xylella_fastidiosa_9a5c 4 4
Xanthomonas_campestris_pv._vesicatoria_str._85-10 22 20
Xanthomonas_axonopodis_pv._citrumelo_F1 19 18
Xanthomonas_oryzae_pv._oryzicola_BLS256 17 16
Xanthomonas_oryzae_pv._oryzae_MAFF_311018 19 18
Xanthomonas_oryzae_pv._oryzae_KACC_10331 15 15
Xanthomonas_campestris_pv._raphani_756C 20 20
Xanthomonas_campestris_pv._campestris_str._8004 23 23
Xanthomonas_campestris_pv._campestris_str._ATCC_33913 24 24
Coxiella_burnetii_CbuK_Q154 4 4
Coxiella_burnetii_CbuG_Q212 3 3
Coxiella_burnetii_RSA_331 3 3
Coxiella_burnetii_RSA_493 3 3
Legionella_pneumophila_str._Paris 15 15
Legionella_pneumophila_str._Lens 11 11
Legionella_pneumophila_subsp._pneumophila_str._Philadelphia_1 11 11
Legionella_pneumophila_subsp._pneumophila 9 9
Legionella_pneumophila_subsp._pneumophila 16 16
Legionella_pneumophila_subsp._pneumophila_ATCC_43290 11 11
Legionella_pneumophila_2300/99_Alcoy 11 11
Cronobacter_sakazakii_ATCC_BAA-894 21 21
Dickeya_dadantii_Ech586 26 26
Dickeya_dadantii_3937 22 22
Pantoea_ananatis_LMG_5342 32 32
Pantoea_ananatis_PA13 30 30
Pantoea_ananatis_AJ13355 27 27
Rahnella_aquatilis_HX2 36 36
Edwardsiella_tarda_FL6-60 6 6
Yersinia_pseudotuberculosis_PB1/+ 16 16
Yersinia_pseudotuberculosis_YPIII 17 17
Yersinia_pseudotuberculosis_IP_32953 18 18
Yersinia_pestis_A1122 17 17
Yersinia_pestis_Z176003 16 16
Yersinia_pestis_D182038 15 15
Yersinia_pestis_D106004 16 16
Yersinia_pestis_biovar_Medievalis_str._Harbin_35 17 17
Yersinia_pestis_Nepal516 17 17
Yersinia_pestis_Antiqua 17 17
Yersinia_pestis_Angola 18 18
Yersinia_pestis_biovar_Microtus_str._91001 15 15
Yersinia_pestis_CO92 16 16
Yersinia_pestis_KIM10+ 17 17
Yersinia_enterocolitica_subsp._palearctica_105.5R(r) 17 17
Yersinia_enterocolitica_subsp._palearctica_Y11 17 17
Shigella_sonnei_53G 16 16
Shigella_flexneri_2002017 16 16
Shigella_flexneri_2a_str._2457T 15 15
Shigella_flexneri_2a_str._301 14 14
Shigella_boydii_Sb227 15 15
Serratia_sp._AS13 37 37
Salmonella_enterica_subsp._arizonae_serovar_62:z4,z23:--_str._RSK2980 20 20
Salmonella_enterica_subsp._enterica_serovar_Schwarzengrund_str._CVM19633 22 22
Salmonella_enterica_subsp._enterica_serovar_Enteritidis_str._P125109 25 25
Salmonella_enterica_subsp._enterica_serovar_Choleraesuis_str._SC-B67 25 25
Salmonella_enterica_subsp._enterica_serovar_Newport_str._SL254 23 23
Salmonella_enterica_subsp._enterica_serovar_Dublin_str._CT_02021853 23 23
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._798 27 27
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._UK-1 28 28
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._ST4/74 28 28
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._T000240 26 26
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._D23580 28 28
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._SL1344 28 28
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._14028S 28 28
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._LT2 28 28
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._P-stx-12 25 25
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18 23 23
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._Ty2 23 23
Salmonella_enterica_subsp._enterica_serovar_Agona_str._SL483 26 26
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_B_str._SPB7 26 26
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_A_str._AKU_12601 23 23
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_A_str._ATCC_9150 23 23
Salmonella_enterica_subsp._enterica_serovar_Heidelberg_str._B182 26 26
Salmonella_enterica_subsp._enterica_serovar_Heidelberg_str._SL476 25 25
Salmonella_enterica_subsp._enterica_serovar_Gallinarum/pullorum_str._RKS5078 24 24
Salmonella_enterica_subsp._enterica_serovar_Gallinarum_str._287/91 24 24
Klebsiella_pneumoniae_KCTC_2242 33 33
Klebsiella_pneumoniae_342 37 37
Klebsiella_pneumoniae_subsp._pneumoniae_HS11286 32 32
Klebsiella_pneumoniae_subsp._pneumoniae_MGH_78578 36 36
Klebsiella_oxytoca_KCTC_1686 35 35
Escherichia_coli_O7:K1_str._CE10 21 21
Escherichia_coli_NA114 19 19
Escherichia_coli_P12b 18 18
Escherichia_coli_str._'clone_D_i2' 19 19
Escherichia_coli_str._'clone_D_i14' 19 19
Escherichia_coli_UM146 19 19
Escherichia_coli_042 18 18
Escherichia_coli_Xuzhou21 22 22
Escherichia_coli_IHE3034 19 19
Escherichia_coli_UMNK88 19 19
Escherichia_coli_O83:H1_str._NRG_857C 18 18
Escherichia_coli_ABU_83972 21 21
Escherichia_coli_KO11FL 20 20
Escherichia_coli_KO11FL 20 20
Escherichia_coli_LF82 19 19
Escherichia_coli_ED1a 21 21
Escherichia_coli_IAI39 19 19
Escherichia_coli_UMN026 21 21
Escherichia_coli_55989 18 18
Escherichia_coli_S88 18 18
Escherichia_coli_IAI1 20 20
Escherichia_coli_W 20 20
Escherichia_coli_W 20 20
Escherichia_coli_DH1 19 19
Escherichia_coli_DH1 19 19
Escherichia_coli_ATCC_8739 20 20
Escherichia_coli_BL21(DE3) 21 21
Escherichia_coli_BL21(DE3) 21 21
Escherichia_coli_SMS-3-5 18 18
Escherichia_coli_SE15 19 19
Escherichia_coli_SE11 20 20
Escherichia_coli_APEC_O1 19 19
Escherichia_coli_O103:H2_str._12009 19 19
Escherichia_coli_UTI89 19 19
Escherichia_coli_536 20 20
Escherichia_coli_HS 18 18
Escherichia_coli_E24377A 19 19
Escherichia_coli_ETEC_H10407 19 19
Escherichia_coli_O55:H7_str._RM12579 22 22
Escherichia_coli_O55:H7_str._CB9615 22 22
Escherichia_coli_O26:H11_str._11368 22 22
Escherichia_coli_CFT073 19 19
Escherichia_coli_O111:H-_str._11128 19 19
Escherichia_coli_O127:H6_str._E2348/69 19 19
Escherichia_coli_O157:H7_str._TW14359 22 22
Escherichia_coli_O157:H7_str._EC4115 22 22
Escherichia_coli_O157:H7_str._Sakai 22 22
Escherichia_coli_O157:H7_str._EDL933 21 21
Escherichia_coli_BW2952 18 18
Escherichia_coli_str._K-12_substr._MG1655 19 19
Escherichia_coli_str._K-12_substr._W3110 19 19
Escherichia_coli_str._K-12_substr._DH10B 19 19
Escherichia_coli_B_str._REL606 21 21
Erwinia_pyrifoliae_DSM_12163 11 11
Erwinia_amylovora_CFBP1430 10 10
Enterobacter_cloacae_EcWSU1 34 34
Enterobacter_cloacae_SCF1 30 30
Enterobacter_cloacae_subsp._cloacae_ATCC_13047 26 26
Pseudomonas_syringae_pv._phaseolicola_1448A 33 32
Pseudomonas_syringae_pv._syringae_B728a 32 31
Pseudomonas_stutzeri_CCUG_29243 19 19
Pseudomonas_stutzeri_DSM_10701 19 19
Pseudomonas_stutzeri_DSM_4166 18 18
Pseudomonas_stutzeri_ATCC_17588_=_LMG_11199 16 16
Pseudomonas_putida_DOT-T1E 41 41
Pseudomonas_putida_S16 40 40
Pseudomonas_putida_BIRD-1 33 33
Pseudomonas_putida_W619 34 34
Pseudomonas_putida_ND6 37 37
Pseudomonas_putida_KT2440 37 37
Pseudomonas_putida_GB-1 39 39
Pseudomonas_fluorescens_F113 43 42
Pseudomonas_fluorescens_A506 37 37
Pseudomonas_fluorescens_Pf0-1 34 34
Pseudomonas_mendocina_NK-01 29 29
Pseudomonas_aeruginosa_DK2 51 51
Pseudomonas_aeruginosa_NCGM2.S1 54 54
Pseudomonas_aeruginosa_M18 52 52
Pseudomonas_aeruginosa_LESB58 52 52
Pseudomonas_aeruginosa_PA7 55 55
Pseudomonas_aeruginosa_PAO1 53 53
Acinetobacter_genomosp._13TU__RUH2624 19 19
Acinetobacter_sp.__SH024 15 15
Acinetobacter_calcoaceticus_ruh2202 19 19
Acinetobacter_baumannii_TCDC-AB0715 21 21
Acinetobacter_baumannii_MDR-TJ 21 21
Acinetobacter_baumannii_1656-2 20 20
Acinetobacter_baumannii__ATCC_19606 21 20
Acinetobacter_baumannii_AB307-0294 16 16
Acinetobacter_baumannii_AYE 17 17
Acinetobacter_baumannii_SDF 13 13
Acinetobacter_baumannii_MDR-ZJ06 21 21
Acinetobacter_baumannii_AB0057 17 17
Acinetobacter_baumannii_ACICU 21 21
Acinetobacter_radioresistens__SH164 8 7
Acinetobacter_junii__SH205 15 14
Acinetobacter_johnsonii__SH046 13 12
Acinetobacter_lwoffii__SH145 9 8
Methylophaga_sp._JAM7 10 10
Francisella_cf._novicida_Fx1 7 7
Francisella_tularensis_subsp._mediasiatica_FSC147 2 2
Francisella_tularensis_subsp._holarctica_FTNF002-00 3 3
Francisella_tularensis_subsp._holarctica_OSU18 4 4
Francisella_tularensis_subsp._holarctica_LVS 4 4
Francisella_tularensis_subsp._tularensis_TIGB03 4 4
Francisella_tularensis_subsp._tularensis_TI0902 4 4
Francisella_tularensis_subsp._tularensis_NE061598 5 5
Francisella_tularensis_subsp._tularensis_FSC198 4 4
Francisella_tularensis_subsp._tularensis_SCHU_S4 4 4
Prochlorococcus_marinus_str._NATL1A 4 4
Prochlorococcus_marinus_str._MIT_9301 7 7
Prochlorococcus_marinus_str._AS9601 7 7
Prochlorococcus_marinus_subsp._marinus_str._CCMP1375 3 3
Prochlorococcus_marinus_subsp._pastoris_str._CCMP1986 7 7
Prochlorococcus_marinus_str._MIT_9215 10 10
Prochlorococcus_marinus_str._MIT_9211 3 3
Prochlorococcus_marinus_str._MIT_9313 10 10
Prochlorococcus_marinus_str._MIT_9312 9 9
Prochlorococcus_marinus_str._MIT_9303 8 8
Prochlorococcus_marinus_str._NATL2A 6 6
Cyanothece_sp._PCC_7822 23 22
Cyanothece_sp._PCC_7425 21 20
Cyanothece_sp._PCC_7424 12 12
Cyanothece_sp._ATCC_51142 12 12
Cyanothece_sp._PCC_8801 17 17
Synechocystis_sp._PCC_6803_substr._PCC-P 13 13
Synechocystis_sp._PCC_6803_substr._PCC-N 13 13
Synechocystis_sp._PCC_6803_substr._GT-I 13 13
Synechocystis_sp._PCC_6803 13 13
Synechococcus_sp._JA-2-3B'a(2-13) 8 8
Synechococcus_sp._JA-3-3Ab 3 3
Synechococcus_sp._CC9902 12 12
Synechococcus_sp._RCC307 14 14
Synechococcus_sp._CC9605 12 12
Synechococcus_sp._WH_8102 12 12
Synechococcus_sp._WH_7803 17 17
Synechococcus_sp._PCC_7002 12 11
Synechococcus_elongatus_PCC_6301 15 15
Thermococcus_sp._AM4 5 5
Thermococcus_sp._CL1 4 4
Pyrococcus_sp._NA2 4 4
Pyrococcus_furiosus_DSM_3638 5 5
Haloquadratum_walsbyi_C23 3 3
Methanococcus_maripaludis_X1 8 8
Methanococcus_maripaludis_C6 8 8
Methanococcus_maripaludis_C7 7 7
Methanococcus_maripaludis_S2 7 7
Methanobacterium_sp._SWAN-1 7 7
Sulfolobus_islandicus_REY15A 7 7
Sulfolobus_islandicus_HVE10/4 6 6
Sulfolobus_islandicus_Y.G.57.14 8 8
Sulfolobus_islandicus_L.S.2.15 8 8
Sulfolobus_islandicus_M.16.27 7 7
Sulfolobus_islandicus_M.14.25 7 7
Sulfolobus_islandicus_M.16.4 7 7
Sulfolobus_islandicus_L.D.8.5 8 8
Sulfolobus_solfataricus_98/2 7 7

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Longest transcript per gene
Genome     Number   Proteins
Homo_sapiens_69_37   (Human)   10 9
Pan_troglodytes_69_2.1.4   (Chimpanzee)   8 8
Gorilla_gorilla_69_3.1   (Western gorilla)   7 7
Pongo_abelii_69_2   (Sumatran orangutan)   10 9
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   8 7
Macaca_mulatta_69_1   (Rhesus monkey)   11 10
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   10 9
Otolemur_garnettii_69_3   (Small-eared galago)   10 9
Microcebus_murinus_69_1   (Gray mouse lemur)   11 8
Tarsius_syrichta_69_1   (Philippine tarsier)   4 4
Rattus_norvegicus_69_3.4   (Norway rat)   11 10
Mus_musculus_69_38   (House mouse)   10 9
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   10 9
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   8 7
Cavia_porcellus_69_3   (Domestic guinea pig)   10 9
Oryctolagus_cuniculus_69_2   (Rabbit)   10 9
Ochotona_princeps_69   (American pika)   8 7
Tupaia_belangeri_69   (Northern tree shrew)   5 5
Sus_scrofa_69_10.2   (Pig)   7 7
Bos_taurus_69_3.1   (Cattle)   12 11
Vicugna_pacos_69_1   (Alpaca)   7 7
Tursiops_truncatus_69_1   (Bottlenosed dolphin)   10 9
Mustela_putorius_furo_69_1.0   (Domestic ferret)   10 9
Ailuropoda_melanoleuca_69_1   (Giant panda)   10 9
Canis_familiaris_69_3.1   (Dog)   11 10
Felis_catus_69   (Domestic cat)   7 6
Equus_caballus_69_2   (Horse)   9 8
Myotis_lucifugus_69_2.0   (Little brown bat)   9 8
Pteropus_vampyrus_69_1   (Large flying fox)   9 8
Sorex_araneus_69_1   (European shrew)   6 6
Erinaceus_europaeus_69   (Western European hedgehog)   6 5
Procavia_capensis_69_1   (Cape rock hyrax)   10 7
Loxodonta_africana_69_3   (African savanna elephant)   10 9
Echinops_telfairi_69   (Small Madagascar hedgehog)   6 6
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   8 7
Choloepus_hoffmanni_69_1   (Hoffmann's two-fingered sloth)   5 4
Macropus_eugenii_69_1.0   (Tammar wallaby)   8 5
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   9 8
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   10 9
Ornithorhynchus_anatinus_69_5   (Platypus)   10 10
Petromyzon_marinus_69_7.0   (Sea lamprey)   6 5
Latimeria_chalumnae_69_1   (Coelacanth)   9 8
Anolis_carolinensis_69_2.0   (Green anole)   9 8
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   7 6
Meleagris_gallopavo_69_2   (Turkey)   8 7
Gallus_gallus_69_2   (Chicken)   7 6
Pelodiscus_sinensis_69_1.0   (Chinese soft-shelled turtle)   9 8
Xenopus_tropicalis_69_4.2   (Western clawed frog)   11 10
Danio_rerio_69_9   (Zebrafish)   10 9
Gadus_morhua_69_1   (Atlantic cod)   9 8
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   10 9
Oryzias_latipes_69_1   (Japanese medaka)   7 7
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   10 9
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   11 10
Takifugu_rubripes_69_4   (Torafugu)   10 9
Oreochromis_niloticus_69_1.0   (Nile tilapia)   10 9
Ciona_savignyi_69_2.0   (Pacific transparent sea squirt)   6 6
Ciona_intestinalis_69   (Vase tunicate)   8 7
Drosophila_melanogaster_69_5   (Fruit fly)   5 5
Caenorhabditis_elegans_69_215   (Nematode)   10 10
Saccharomyces_cerevisiae_69_4   (Baker's yeast)   5 5

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Others
Genome     Number   Proteins
Homo_sapiens__(NCBI_version)   (Human)   12 11
Mus_musculus_63_37__(longest_transcript_per_gene)   (House mouse)   10 9
Loa_loa_v3.3   (Eye worm)   6 6
Wuchereria_bancrofti_v1.0   (Agent of lymphatic filariasis)   7 7
Brugia_malayi_v1.0   (Agent of lymphatic filariasis)   4 4
Moniliophthora_perniciosa_FA553__(Genome_survey) 15 15
Encephalitozoon_cuniculi_(endoparasite) 1 1
Lotus_japonicus__(Early_assembly) 78 75
Malus_x_domestica   (Apple)   133 120
Ricinus_communis__(Early_assembly)   (Castor bean)   91 88
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   86 82
Phoenix_dactylifera__(Early_draft)   (Date palm)   33 32
Picea_sitchensis__(Incomplete)   (Sitka spruce)   11 11
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_C_strain_RKS4594 23 23
NCBI_plasmid_sequences_(Plasmids) 960 939
UniProt__viral_sequences_(Viral) 17 17
PDB_chains_(SCOP_1.75)_(PDB) 90 84
TargetDB__(Targets) 1294 1262
Protozoadb_2010_08_(Protozoadb) 112 112
STRING_v9.0_(STRING) 15095 14931
Protein_Data_Bank_(all_PDB_sequenc) 674 630
Uniprot_2013_05_(Uniprot) 100522 99646
NCBI_viral_sequences_(Viral) 11 11

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