SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for Immunoglobulin-binding domains superfamily in groups of genomes

Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a Immunoglobulin-binding domains domain in that genome.

Complete genomes
Genome     Number   Proteins
Faecalibacterium_prausnitzii 1 1
Streptococcus_equi_subsp._equi_4047 2 1
Streptococcus_dysgalactiae_subsp._equisimilis_GGS_124 2 1

Strains
Genome     Number   Proteins
Streptococcus_equi_subsp._zooepidemicus_ATCC_35246 2 1
Streptococcus_equi_subsp._zooepidemicus_MGCS10565 2 1
Streptococcus_equi_subsp._zooepidemicus 2 1
Streptococcus_dysgalactiae_subsp._equisimilis_167 2 1
Streptococcus_dysgalactiae_subsp._equisimilis_AC-2713 2 1
Streptococcus_dysgalactiae_subsp._equisimilis_ATCC_12394 2 1
Streptococcus_dysgalactiae_subsp._equisimilis_RE378 2 1

Others
Genome     Number   Proteins
STRING_v9.0.5_(STRING) 8 4
PDB_chains_(SCOP_1.75)_(PDB) 31 31
Uniprot_2018_03_genome 94 44
Protein_Data_Bank_(all_PDB_sequenc) 231 231
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 447 447
NCBI_2017_08_genome 569 284
TargetDB__(Targets) 1 1

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