SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for L-A virus major coat protein superfamily in groups of genomes

Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a L-A virus major coat protein domain in that genome.

Complete genomes
Genome     Number   Proteins
Penicillium_marneffei_ATCC_18224_ 1 1
Candida_parapsilosis_ 1 1
Debaromyces_hansenii 1 1
Schizosaccharomyces_pombe   (Fission yeast)   1 1

Strains
Genome     Number   Proteins
Schizosaccharomyces_pombe_972h-_ 1 1

Others
Genome     Number   Proteins
Protein_Data_Bank_(all_PDB_sequenc) 2 2
STRING_v9.0.5_(STRING) 2 2
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 4 4
NCBI_viral_sequences_(Viral) 6 5
UniProt__viral_sequences_(Viral) 8 7
NCBI_2017_08_genome 33 30
Uniprot_2018_03_genome 95 91
PDB_chains_(SCOP_1.75)_(PDB) 1 1

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