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Yeast Phenotype (YP): chromosome/plasmid maintenance 

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Root: YP Hierarchy (yeast phenotype from Ascomycete phenotype ontology)

Shortest distance to current term
(+ for parents, - for children)
YP term [YP ID] <#Children> #Domains
(Superfamily|Family)
#Supra-domain
(Single|Duplex|Triple)
+ + 2:   observable [APO:0000017] <7>
+ 1:   cellular processes [APO:0000066] <6>(217|234) (219|81|19)
0:   chromosome/plasmid maintenance [APO:0000143] <8>(11|11) (11|3|0)
- 1:   aneuploidy [APO:0000336](0|0) (0|0|0)
- 1:   chromosome segregation [APO:0000208](0|0) (1|0|0)
- 1:   mitotic recombination [APO:0000225](0|0) (0|0|0)
- 1:   mutation frequency [APO:0000198](3|3) (3|2|0)
- 1:   polyploidy [APO:0000337](0|0) (0|0|0)
- 1:   silencing [APO:0000046](0|0) (0|0|0)
- 1:   telomere length [APO:0000144](0|1) (0|0|0)
- 1:   transposable element transposition [APO:0000047](0|2) (0|0|0)

Superfamily

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Superfamily

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SCOP term FDR (all) Annotation (direct or inherited)
PriA/YqbF domain0Direct
DNA ligase/mRNA capping enzyme, catalytic domain0Direct
GINS helical bundle-like0Direct
SAICAR synthase-like0Direct
Nucleic acid-binding proteins0.000005327Direct
Bromodomain0.0002301Direct
Prefoldin0.0004165Direct
GroEL apical domain-like0.000489Direct
P-loop containing nucleoside triphosphate hydrolases0.0006024Direct
post-AAA+ oligomerization domain-like0.02125Inherited
DNA/RNA polymerases0.04297Inherited

LINKTO: Domain2BO Download and Domain2BO Algorithm

Supra-domain (Single|Duplex|Triple)

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Supra-domain (Single)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
GINS helical bundle-like0Direct
PriA/YqbF domain0Direct
DNA ligase/mRNA capping enzyme, catalytic domain0Direct
SAICAR synthase-like0Direct
Nucleic acid-binding proteins0.000004489Direct
Bromodomain0.000195Direct
Prefoldin0.0003551Direct
GroEL apical domain-like0.0004173Direct
P-loop containing nucleoside triphosphate hydrolases0.0005141Direct
post-AAA+ oligomerization domain-like0.01885Inherited
DNA/RNA polymerases0.0386Inherited

LINKTO: Supra-domain2BO Download and Supra-domain2BO Algorithm

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Supra-domain (Duplex) in N- to C-terminal order

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
56091,50249
  • 56091 - DNA ligase/mRNA capping enzyme, catalytic domain
  • 50249 - Nucleic acid-binding proteins
  • 0Direct
    53098,56672
  • 53098 - Ribonuclease H-like
  • 56672 - DNA/RNA polymerases
  • 0Direct
    52540,48019
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 48019 - post-AAA+ oligomerization domain-like
  • 0.01885Inherited

    LINKTO: Supra-domain2BO Download and Supra-domain2BO Algorithm

    Distribution on sTOL

    Plot distribution on species Tree Of Life (sTOL) for Superfamily and/or Family domains annotated by this YP term
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    Plot distribution on species Tree Of Life (sTOL) for single supra-domains annotated by this YP term
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