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Zebrafish Anatomy (ZA): nervous system 

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Root: ZA Hierarchy (zebrafish anatomy from ZFIN zebrafish anatomy ontology)

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(+ for parents, - for children)
ZA term [ZA ID] <#Children> #Domains
(Superfamily|Family)
#Supra-domain
(Single|Duplex|Triple)
+ + + + 4:   zebrafish anatomical entity [ZFA:0100000] <6>
+ + + 3:   anatomical structure [ZFA:0000037] <11>(241|250) (241|141|73)
+ + 2:   whole organism [ZFA:0001094] <7>(240|249) (240|140|73)
+ + 2:   anatomical group [ZFA:0001512] <5>(155|170) (157|111|56)
+ 1:   anatomical system [ZFA:0001439] <16>(154|169) (156|110|56)
0:   nervous system [ZFA:0000396] <9>(54|48) (55|30|14)
- 1:   neuron [ZFA:0009248] <17>(5|6) (5|4|1)
- 1:   central nervous system [ZFA:0000012] <9>(21|20) (21|14|7)
- 1:   nerve [ZFA:0007009] <7>(3|1) (4|2|1)
- 1:   peripheral nervous system [ZFA:0000142] <7>(3|2) (3|2|1)
- 1:   sensory system [ZFA:0000282] <5>(19|16) (19|10|5)
- 1:   autonomic nervous system [ZFA:0001574] <4>(0|0) (0|0|0)
- 1:   ependymal cell [ZFA:0009033] <1>(0|0) (0|0|0)
- 1:   glial cell [ZFA:0009073] <1>(0|0) (0|0|0)
- 1:   primitive meninx [ZFA:0001355] <1>(0|0) (0|0|0)

Superfamily

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Superfamily

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SCOP term FDR (all) Annotation (direct or inherited)
CoA-dependent acyltransferases0Direct
ADC-like0Direct
Nucleotide cyclase0Direct
Tubulin nucleotide-binding domain-like0Direct
Composite domain of metallo-dependent hydrolases0Direct
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases0Direct
Doublecortin (DC)0Direct
Carbonic anhydrase0Direct
PP2C-like0Direct
Metallo-dependent hydrolases0Direct
CCCH zinc finger0Direct
BRK domain-like0Direct
Nucleotidylyl transferase0Direct
Cdc48 domain 2-like0Direct
Single hybrid motif0Direct
BRCT domain0Direct
BPTI-like0Direct
SMAD MH1 domain0Direct
Glutathione synthetase ATP-binding domain-like0Direct
Tubulin C-terminal domain-like0Direct
Cap-Gly domain0Direct
Translation proteins0Direct
Soluble quinoprotein glucose dehydrogenase0Direct
Dimerization-anchoring domain of cAMP-dependent PK regulatory subunit0Direct
Class II aaRS and biotin synthetases0Direct
Bet v1-like0Direct
HSP20-like chaperones0Direct
Translational machinery components0Direct
WD40 repeat-like0.0008311Direct
HMG-box0.03565Inherited
P-loop containing nucleoside triphosphate hydrolases0.05531Inherited
Homeodomain-like0.07938Inherited
SMAD/FHA domain0.09336Inherited
Serine protease inhibitors0.2288Inherited
Protease propeptides/inhibitors0.252Inherited
Cyclin-like0.2699Inherited
L domain-like0.2825Inherited
lambda repressor-like DNA-binding domains0.326Inherited
Multidrug efflux transporter AcrB transmembrane domain0.339Inherited
Subtilisin-like0.3452Inherited
GTPase activation domain, GAP0.3748Inherited
Plexin repeat0.4422Inherited
Sema domain0.4422Inherited
PDZ domain-like0.4558Inherited
Fibronectin type III0.4917Inherited
Ankyrin repeat0.6185Inherited
Cystine-knot cytokines0.7054Inherited
beta-beta-alpha zinc fingers0.7483Inherited
Cadherin-like0.8003Inherited
NAD(P)-binding Rossmann-fold domains0.8184Inherited
Growth factor receptor domain0.9348Inherited
Glucocorticoid receptor-like (DNA-binding domain)1Inherited
EGF/Laminin1Inherited
Immunoglobulin1Inherited

LINKTO: Domain2BO Download and Domain2BO Algorithm

Family

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Family

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SCOP term FDR (all) Annotation (direct or inherited)
Hydantoinase (dihydropyrimidinase)0Direct
Cdc48 domain 2-like0Direct
Elongation factors0Direct
Group II chaperonin (CCT, TRIC), intermediate domain0Direct
Tubulin, GTPase domain0Direct
Carbonic anhydrase0Direct
Group II chaperonin (CCT, TRIC), ATPase domain0Direct
Small Kunitz-type inhibitors & BPTI-like toxins0Direct
Cap-Gly domain0Direct
Class I aminoacyl-tRNA synthetases (RS), catalytic domain0Direct
Dimerization-anchoring domain of cAMP-dependent PK regulatory subunit0Direct
Doublecortin (DC)0Direct
Hydantoinase (dihydropyrimidinase), catalytic domain0Direct
SMAD MH1 domain0Direct
BRK domain-like0Direct
Ovomucoid domain III-like0Direct
Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain0Direct
Adenylyl and guanylyl cyclase catalytic domain0Direct
SMAD domain0Direct
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases0Direct
Chromo domain0Direct
CCCH zinc finger0Direct
PP2C-like0Direct
Tetramerization domain of potassium channels0Direct
Biotinyl/lipoyl-carrier proteins and domains0Direct
Tubulin, C-terminal domain0Direct
Association domain of calcium/calmodulin-dependent protein kinase type II alpha subunit, CAMK2A0Direct
Cdc48 N-terminal domain-like0Direct
Ubiquitin carboxyl-terminal hydrolase, UCH0.0009761Direct
WD40-repeat0.003727Inherited
HMG-box0.02431Inherited
Tetratricopeptide repeat (TPR)0.02431Inherited
Tandem AAA-ATPase domain0.02431Inherited
Homeodomain0.08023Inherited
POU-specific domain0.1262Inherited
Multidrug efflux transporter AcrB transmembrane domain0.1278Inherited
Growth factor receptor domain0.3573Inherited
Plexin repeat0.3931Inherited
Sema domain0.3931Inherited
Fibronectin type III0.4243Inherited
PDZ domain0.4916Inherited
Ankyrin repeat0.5594Inherited
Paired domain0.6475Inherited
I set domains0.7071Inherited
Classic zinc finger, C2H20.7137Inherited
Cadherin0.8179Inherited
Transforming growth factor (TGF)-beta0.8179Inherited
EGF-type module1Inherited

LINKTO: Domain2BO Download and Domain2BO Algorithm

Supra-domain (Single|Duplex|Triple)

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Supra-domain (Single)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Class II aaRS and biotin synthetases0Direct
Nucleotidylyl transferase0Direct
ADC-like0Direct
Dimerization-anchoring domain of cAMP-dependent PK regulatory subunit0Direct
Translation proteins0Direct
Soluble quinoprotein glucose dehydrogenase0Direct
SMAD MH1 domain0Direct
Carbonic anhydrase0Direct
Metallo-dependent hydrolases0Direct
Composite domain of metallo-dependent hydrolases0Direct
Single hybrid motif0Direct
PP2C-like0Direct
Bet v1-like0Direct
HSP20-like chaperones0Direct
Translational machinery components0Direct
CoA-dependent acyltransferases0Direct
Nucleotide cyclase0Direct
Doublecortin (DC)0Direct
BRK domain-like0Direct
Tubulin C-terminal domain-like0Direct
BRCT domain0Direct
Glutathione synthetase ATP-binding domain-like0Direct
CCCH zinc finger0Direct
Cap-Gly domain0Direct
Tubulin nucleotide-binding domain-like0Direct
BPTI-like0Direct
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases0Direct
Cdc48 domain 2-like0Direct
WD40 repeat-like0.000461Direct
HMG-box0.024Inherited
P-loop containing nucleoside triphosphate hydrolases0.03856Inherited
Homeodomain-like0.05834Inherited
alpha/beta-Hydrolases0.05884Inherited
SMAD/FHA domain0.07019Inherited
Serine protease inhibitors0.1919Inherited
Protease propeptides/inhibitors0.2138Inherited
Cyclin-like0.2311Inherited
L domain-like0.2436Inherited
lambda repressor-like DNA-binding domains0.2838Inherited
Multidrug efflux transporter AcrB transmembrane domain0.2969Inherited
Subtilisin-like0.3028Inherited
GTPase activation domain, GAP0.3322Inherited
Plexin repeat0.4007Inherited
Sema domain0.4007Inherited
PDZ domain-like0.4151Inherited
Fibronectin type III0.4522Inherited
Ankyrin repeat0.5823Inherited
Cystine-knot cytokines0.6766Inherited
beta-beta-alpha zinc fingers0.7239Inherited
Cadherin-like0.7798Inherited
NAD(P)-binding Rossmann-fold domains0.7997Inherited
Growth factor receptor domain0.9278Inherited
Immunoglobulin1Inherited
EGF/Laminin1Inherited
Glucocorticoid receptor-like (DNA-binding domain)1Inherited

LINKTO: Supra-domain2BO Download and Supra-domain2BO Algorithm

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Supra-domain (Duplex) in N- to C-terminal order

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
89837,89837
  • 89837 - Doublecortin (DC)
  • 89837 - Doublecortin (DC)
  • 0Direct
    52540,50447
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 50447 - Translation proteins
  • 0Direct
    50978,50998
  • 50978 - WD40 repeat-like
  • 50998 - Quinoprotein alcohol dehydrogenase-like
  • 0Direct
    52058,49265
  • 52058 - L domain-like
  • 49265 - Fibronectin type III
  • 0Direct
    54585,52540
  • 54585 - Cdc48 domain 2-like
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0Direct
    52374,47323
  • 52374 - Nucleotidylyl transferase
  • 47323 - Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
  • 0Direct
    51556,51338
  • 51556 - Metallo-dependent hydrolases
  • 51338 - Composite domain of metallo-dependent hydrolases
  • 0Direct
    54001,143791
  • 54001 - Cysteine proteinases
  • 143791 - DUSP-like
  • 0Direct
    54160,52540
  • 54160 - Chromo domain-like
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0Direct
    54160,54160
  • 54160 - Chromo domain-like
  • 54160 - Chromo domain-like
  • 0Direct
    52490,55307
  • 52490 - Tubulin nucleotide-binding domain-like
  • 55307 - Tubulin C-terminal domain-like
  • 0Direct
    57362,57362
  • 57362 - BPTI-like
  • 57362 - BPTI-like
  • 0Direct
    82199,57667
  • 82199 - SET domain
  • 57667 - beta-beta-alpha zinc fingers
  • 0Direct
    50692,54585
  • 50692 - ADC-like
  • 54585 - Cdc48 domain 2-like
  • 0Direct
    103575,81296
  • 103575 - Plexin repeat
  • 81296 - E set domains
  • 0Direct
    52540,52540
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.0679Inherited
    54897,52743
  • 54897 - Protease propeptides/inhibitors
  • 52743 - Subtilisin-like
  • 0.1246Inherited
    49562,48350
  • 49562 - C2 domain (Calcium/lipid-binding domain, CaLB)
  • 48350 - GTPase activation domain, GAP
  • 0.2542Inherited
    81296,81296
  • 81296 - E set domains
  • 81296 - E set domains
  • 0.3028Inherited
    47413,46689
  • 47413 - lambda repressor-like DNA-binding domains
  • 46689 - Homeodomain-like
  • 0.3028Inherited
    101912,103575
  • 101912 - Sema domain
  • 103575 - Plexin repeat
  • 0.4007Inherited
    48726,49265
  • 48726 - Immunoglobulin
  • 49265 - Fibronectin type III
  • 0.4575Inherited
    50156,50156
  • 50156 - PDZ domain-like
  • 50156 - PDZ domain-like
  • 0.5281Inherited
    57196,57184
  • 57196 - EGF/Laminin
  • 57184 - Growth factor receptor domain
  • 0.808Inherited
    57667,57667
  • 57667 - beta-beta-alpha zinc fingers
  • 57667 - beta-beta-alpha zinc fingers
  • 0.8211Inherited
    90257,90257
  • 90257 - Myosin rod fragments
  • 90257 - Myosin rod fragments
  • 0.8457Inherited
    49313,49313
  • 49313 - Cadherin-like
  • 49313 - Cadherin-like
  • 0.8854Inherited
    48726,48726
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 0.9433Inherited
    57196,57196
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 0.9745Inherited
    57716,57716
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 0.9883Inherited

    LINKTO: Supra-domain2BO Download and Supra-domain2BO Algorithm

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    Supra-domain (Triple) in N- to C-terminal order

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    50692,54585,52540
  • 50692 - ADC-like
  • 54585 - Cdc48 domain 2-like
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0Direct
    54160,52540,52540
  • 54160 - Chromo domain-like
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0Direct
    52058,49265,49265
  • 52058 - L domain-like
  • 49265 - Fibronectin type III
  • 49265 - Fibronectin type III
  • 0Direct
    57184,52058,49265
  • 57184 - Growth factor receptor domain
  • 52058 - L domain-like
  • 49265 - Fibronectin type III
  • 0Direct
    54160,54160,52540
  • 54160 - Chromo domain-like
  • 54160 - Chromo domain-like
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0Direct
    54585,52540,52540
  • 54585 - Cdc48 domain 2-like
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0Direct
    82199,57667,57667
  • 82199 - SET domain
  • 57667 - beta-beta-alpha zinc fingers
  • 57667 - beta-beta-alpha zinc fingers
  • 0Direct
    103575,81296,81296
  • 103575 - Plexin repeat
  • 81296 - E set domains
  • 81296 - E set domains
  • 0Direct
    57196,57196,57184
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 57184 - Growth factor receptor domain
  • 0.2017Inherited
    48726,48726,49265
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 49265 - Fibronectin type III
  • 0.2358Inherited
    81296,81296,81296
  • 81296 - E set domains
  • 81296 - E set domains
  • 81296 - E set domains
  • 0.3028Inherited
    90257,90257,90257
  • 90257 - Myosin rod fragments
  • 90257 - Myosin rod fragments
  • 90257 - Myosin rod fragments
  • 0.5057Inherited
    48726,48726,48726
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 0.636Inherited
    49313,49313,49313
  • 49313 - Cadherin-like
  • 49313 - Cadherin-like
  • 49313 - Cadherin-like
  • 0.9317Inherited

    LINKTO: Supra-domain2BO Download and Supra-domain2BO Algorithm

    Distribution on sTOL

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