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Domain combination pairs in Rhodobacter sphaeroides ATCC 17029

All pairs of domain combinations at the superfamily level are listed here.
The identification of domain pairs does not account for the possibility of non-contiguous domains. Inserted, or interlaced, domains are seen as having a simple pair ordering.

  • For a list of unique full length architectures for this genome click here (can be slow).
Adjacent domain pairs graph

Graph of adjacent domain pairs.


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Domain combination pairs

660 domain combination pairs.
Click on a column heading to sort that column, or the 'View' button to see domain architetures for that domain pair combination.

Superfamily (N) Superfamily (C) Number of occurrances Number unique
P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases 3412
Homodimeric domain of signal transducing histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 3015
"Winged helix" DNA-binding domain Periplasmic binding protein-like II 261
"Winged helix" DNA-binding domain GntR ligand-binding domain-like 232
P-loop containing nucleoside triphosphate hydrolases MOP-like 201
Multidrug resistance efflux transporter EmrE Multidrug resistance efflux transporter EmrE 192
NAD(P)-binding Rossmann-fold domains 6-phosphogluconate dehydrogenase C-terminal domain-like 173
GroES-like NAD(P)-binding Rossmann-fold domains 173
PYP-like sensor domain (PAS domain) ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 1410
Sigma2 domain of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 144
Actin-like ATPase domain Actin-like ATPase domain 145
NAD(P)-binding Rossmann-fold domains Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 134
CheY-like C-terminal effector domain of the bipartite response regulators 122
PYP-like sensor domain (PAS domain) Homodimeric domain of signal transducing histidine kinase 128
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheY-like 129
Metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases 114
Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) 116
Homeodomain-like Tetracyclin repressor-like, C-terminal domain 111
Thioredoxin-like GST C-terminal domain-like 112
ABC transporter transmembrane region P-loop containing nucleoside triphosphate hydrolases 112
Formate/glycerate dehydrogenase catalytic domain-like NAD(P)-binding Rossmann-fold domains 113
P-loop containing nucleoside triphosphate hydrolases Homeodomain-like 107
PreATP-grasp domain Glutathione synthetase ATP-binding domain-like 106
PYP-like sensor domain (PAS domain) PYP-like sensor domain (PAS domain) 1010
Zn-dependent exopeptidases Bacterial exopeptidase dimerisation domain 91
P-loop containing nucleoside triphosphate hydrolases Translation proteins 95
"Winged helix" DNA-binding domain Dimeric alpha+beta barrel 91
FAD/NAD(P)-binding domain FAD-linked reductases, C-terminal domain 94
Homodimeric domain of signal transducing histidine kinase CheY-like 96
Thiamin diphosphate-binding fold (THDP-binding) TK C-terminal domain-like 85
PYP-like sensor domain (PAS domain) CheY-like 86
Thiolase-like Thiolase-like 81
Acyl-CoA dehydrogenase NM domain-like Acyl-CoA dehydrogenase C-terminal domain-like 83
beta-Roll beta-Roll 86
Enolase N-terminal domain-like Enolase C-terminal domain-like 81
(Trans)glycosidases Glycosyl hydrolase domain 64
cAMP-binding domain-like "Winged helix" DNA-binding domain 61
FAD-binding/transporter-associated domain-like FAD-linked oxidases, C-terminal domain 62
P-loop containing nucleoside triphosphate hydrolases EF-G C-terminal domain-like 64
CheY-like Homeodomain-like 63
Cytochrome c Cytochrome c 63
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Histidine-containing phosphotransfer domain, HPT domain 64
Nucleotidylyl transferase Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 66
CheY-like P-loop containing nucleoside triphosphate hydrolases 63
Glutathione synthetase ATP-binding domain-like Rudiment single hybrid motif 63
Ribosomal protein S5 domain 2-like P-loop containing nucleoside triphosphate hydrolases 64
PreATP-grasp domain Rudiment single hybrid motif 63
E set domains (Trans)glycosidases 53
Calcium ATPase, transduction domain A Calcium ATPase, transmembrane domain M 54
lambda repressor-like DNA-binding domains Periplasmic binding protein-like I 51
Nucleotide cyclase EAL domain-like 54
MetI-like MetI-like 52
Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain 53
Homeodomain-like Ribonuclease H-like 51
P-loop containing nucleoside triphosphate hydrolases Class I glutamine amidotransferase-like 51
Nucleic acid-binding proteins Nucleic acid-binding proteins 54
FAD/NAD(P)-binding domain FAD/NAD-linked reductases, dimerisation (C-terminal) domain 52
Homeodomain-like Homeodomain-like 52
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 53
HAD-like Calcium ATPase, transmembrane domain M 54
Glutamine synthetase, N-terminal domain Glutamine synthetase/guanido kinase 51
EF-G C-terminal domain-like EF-G C-terminal domain-like 53
Calcium ATPase, transduction domain A HAD-like 54
MurD-like peptide ligases, catalytic domain MurD-like peptide ligases, peptide-binding domain 53
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB transmembrane domain 53
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 53
Aminoacid dehydrogenase-like, N-terminal domain NAD(P)-binding Rossmann-fold domains 52
Translation proteins EF-G C-terminal domain-like 53
Pheromone-binding domain of LuxR-like quorum-sensing transcription factors C-terminal effector domain of the bipartite response regulators 51
FAD/NAD(P)-binding domain FAD/NAD(P)-binding domain 53
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB transmembrane domain 53
ParB/Sulfiredoxin KorB DNA-binding domain-like 41
Chemotaxis receptor methyltransferase CheR, N-terminal domain S-adenosyl-L-methionine-dependent methyltransferases 42
PLP-binding barrel Alanine racemase C-terminal domain-like 41
2Fe-2S ferredoxin-like CO dehydrogenase ISP C-domain like 42
PYP-like sensor domain (PAS domain) Nucleotide cyclase 44
Creatinase/prolidase N-terminal domain Creatinase/aminopeptidase 42
N-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase 41
Formate dehydrogenase/DMSO reductase, domains 1-3 ADC-like 42
PDZ domain-like PDZ domain-like 43
Triger factor/SurA peptide-binding domain-like FKBP-like 43
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 42
Homodimeric domain of signal transducing histidine kinase Histidine-containing phosphotransfer domain, HPT domain 42
GAF domain-like Nucleotide cyclase 43
IlvD/EDD N-terminal domain-like LeuD/IlvD-like 41
N-terminal domain of alpha and beta subunits of F1 ATP synthase P-loop containing nucleoside triphosphate hydrolases 41
E set domains Glycosyl hydrolase domain 42
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheW-like 43
PurM N-terminal domain-like PurM C-terminal domain-like 42
"Winged helix" DNA-binding domain GAF domain-like 41
P-loop containing nucleoside triphosphate hydrolases C-terminal domain of alpha and beta subunits of F1 ATP synthase 41
P-loop containing nucleoside triphosphate hydrolases GAF domain-like 44
CheY-like Histidine-containing phosphotransfer domain, HPT domain 32
TrkA C-terminal domain-like TrkA C-terminal domain-like 32
Nucleotidylyl transferase An anticodon-binding domain of class I aminoacyl-tRNA synthetases 31
Class II aaRS and biotin synthetases Class II aaRS ABD-related 32
HMA, heavy metal-associated domain Calcium ATPase, transduction domain A 33
GAF domain-like Homeodomain-like 33
Nqo1 FMN-binding domain-like Nqo1C-terminal domain-like 32
Thiamin diphosphate-binding fold (THDP-binding) DHS-like NAD/FAD-binding domain 31
ACT-like ACT-like 33
LuxS/MPP-like metallohydrolase LuxS/MPP-like metallohydrolase 31
"Winged helix" DNA-binding domain NagB/RpiA/CoA transferase-like 31
Nqo1 middle domain-like Nqo1C-terminal domain-like 32
Translation proteins EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 31
Phosphoglucomutase, first 3 domains Phosphoglucomutase, C-terminal domain 31
Double Clp-N motif P-loop containing nucleoside triphosphate hydrolases 32
PYP-like sensor domain (PAS domain) EAL domain-like 33
Phosphoglucomutase, first 3 domains Phosphoglucomutase, first 3 domains 31
Trypsin-like serine proteases PDZ domain-like 32
Nicotinate/Quinolinate PRTase N-terminal domain-like Nicotinate/Quinolinate PRTase C-terminal domain-like 31
Folate-binding domain Aminomethyltransferase beta-barrel domain 33
2Fe-2S ferredoxin-like Formate dehydrogenase/DMSO reductase, domains 1-3 32
"Winged helix" DNA-binding domain Actin-like ATPase domain 31
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Ribosomal protein S5 domain 2-like 33
PreATP-grasp domain Single hybrid motif 32
Translation proteins Ribosomal protein S5 domain 2-like 31
ValRS/IleRS/LeuRS editing domain Nucleotidylyl transferase 33
Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like 32
4Fe-4S ferredoxins Formate dehydrogenase/DMSO reductase, domains 1-3 32
CO dehydrogenase molybdoprotein N-domain-like Molybdenum cofactor-binding domain 32
FAD-binding/transporter-associated domain-like CO dehydrogenase flavoprotein C-terminal domain-like 32
Nqo1 FMN-binding domain-like Nqo1 middle domain-like 32
Diaminopimelate epimerase-like Diaminopimelate epimerase-like 31
HAMP domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 32
P-loop containing nucleoside triphosphate hydrolases EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 31
GroES-like GroES-like 31
Homeodomain-like SIS domain 31
Glutathione synthetase ATP-binding domain-like Single hybrid motif 32
2Fe-2S ferredoxin-like 4Fe-4S ferredoxins 32
Homodimeric domain of signal transducing histidine kinase CheW-like 32
"Winged helix" DNA-binding domain PLP-dependent transferases 31
P-loop containing nucleoside triphosphate hydrolases "Winged helix" DNA-binding domain 33
Class I glutamine amidotransferase-like Homeodomain-like 31
Sm-like ribonucleoproteins Mechanosensitive channel protein MscS (YggB), C-terminal domain 33
Nucleic acid-binding proteins RuvA domain 2-like 33
Phosphohistidine domain Phosphoenolpyruvate/pyruvate domain 33
DNA ligase/mRNA capping enzyme, catalytic domain Nucleic acid-binding proteins 33
Rudiment single hybrid motif Single hybrid motif 32
HAMP domain-like Homodimeric domain of signal transducing histidine kinase 32
Nucleic acid-binding proteins Translation proteins SH3-like domain 32
HMA, heavy metal-associated domain Calcium ATPase, transmembrane domain M 33
Histidine-containing phosphotransfer domain, HPT domain CheW-like 32
ValRS/IleRS/LeuRS editing domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 33
Phospholipase D/nuclease Phospholipase D/nuclease 33
CBS-domain pair FAD-binding/transporter-associated domain-like 31
CheY-like CheY-like 33
Lysozyme-like beta-lactamase/transpeptidase-like 33
HMA, heavy metal-associated domain HAD-like 33
EF-G C-terminal domain-like Ribosomal protein S5 domain 2-like 31
Alpha-L RNA-binding motif Pseudouridine synthase 32
Sensory domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 22
tRNA-binding arm Class II aaRS and biotin synthetases 21
NAD(P)-binding Rossmann-fold domains ACT-like 22
PYP-like sensor domain (PAS domain) Histidine-containing phosphotransfer domain, HPT domain 21
P-loop containing nucleoside triphosphate hydrolases Restriction endonuclease-like 22
Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 21
NAD(P)-binding Rossmann-fold domains Isocitrate/Isopropylmalate dehydrogenase-like 21
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphohistidine domain 22
CheY-like Methylesterase CheB, C-terminal domain 21
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex CoA-dependent acyltransferases 22
Aldolase 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 21
Methionine synthase domain Cobalamin (vitamin B12)-binding domain 22
DNA methylase specificity domain DNA methylase specificity domain 22
MoeA N-terminal region -like Molybdenum cofactor biosynthesis proteins 21
Lysozyme-like PGBD-like 21
Riboflavin synthase domain-like Ferredoxin reductase-like, C-terminal NADP-linked domain 22
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphoenolpyruvate/pyruvate domain 22
Mechanosensitive channel protein MscS (YggB), transmembrane region Sm-like ribonucleoproteins 22
GroEL equatorial domain-like GroEL-intermediate domain like 21
RuBisCO, large subunit, small (N-terminal) domain RuBisCo, C-terminal domain 21
Nucleotidyltransferase Poly A polymerase C-terminal region-like 22
ClpP/crotonase ClpP/crotonase 21
Nucleic acid-binding proteins P-loop containing nucleoside triphosphate hydrolases 22
P-loop containing nucleoside triphosphate hydrolases post-AAA+ oligomerization domain-like 22
HlyD-like secretion proteins HlyD-like secretion proteins 21
FliG FliG 21
MurCD N-terminal domain MurD-like peptide ligases, peptide-binding domain 21
Adenine nucleotide alpha hydrolases-like Adenine nucleotide alpha hydrolases-like 21
Ribosomal protein S5 domain 2-like Ribonuclease PH domain 2-like 22
MurE/MurF N-terminal domain MurD-like peptide ligases, peptide-binding domain 21
Methylated DNA-protein cysteine methyltransferase domain Methylated DNA-protein cysteine methyltransferase, C-terminal domain 22
Ribosomal protein L7/12, oligomerisation (N-terminal) domain ClpS-like 21
Penicillin binding protein dimerisation domain beta-lactamase/transpeptidase-like 22
FAD/NAD(P)-binding domain Aminomethyltransferase beta-barrel domain 22
ThrRS/AlaRS common domain Class II aaRS and biotin synthetases 22
Nucleotide-diphospho-sugar transferases Trimeric LpxA-like enzymes 21
Translation proteins ThrRS/AlaRS common domain 22
6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 21
Single hybrid motif CoA-dependent acyltransferases 22
MoeA N-terminal region -like MoeA C-terminal domain-like 21
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 21
"Winged helix" DNA-binding domain "Winged helix" DNA-binding domain 22
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Type II DNA topoisomerase 22
P-loop containing nucleoside triphosphate hydrolases CarD-like 22
2Fe-2S ferredoxin-like alpha-helical ferredoxin 21
Ribosomal protein S5 domain 2-like Type II DNA topoisomerase 22
PUA domain-like P-loop containing nucleoside triphosphate hydrolases 22
ABC transporter involved in vitamin B12 uptake, BtuC ABC transporter involved in vitamin B12 uptake, BtuC 21
GroEL equatorial domain-like GroEL apical domain-like 21
Nucleic acid-binding proteins Class II aaRS and biotin synthetases 22
Aminoacid dehydrogenase-like, N-terminal domain Isocitrate/Isopropylmalate dehydrogenase-like 21
Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 22
Cobalamin (vitamin B12)-dependent enzymes Cobalamin (vitamin B12)-binding domain 21
GAF domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 22
PK beta-barrel domain-like Phosphoenolpyruvate/pyruvate domain 22
Cytochrome c oxidase subunit I-like Cytochrome c oxidase subunit III-like 22
Thiamin diphosphate-binding fold (THDP-binding) Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 22
Molybdenum cofactor biosynthesis proteins MoeA C-terminal domain-like 21
Rhodanese/Cell cycle control phosphatase Rhodanese/Cell cycle control phosphatase 21
FAD/NAD(P)-binding domain HI0933 insert domain-like 21
Metallo-dependent phosphatases 5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain 22
P-loop containing nucleoside triphosphate hydrolases TRCF domain-like 22
ClpP/crotonase NAD(P)-binding Rossmann-fold domains 21
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 21
GAF domain-like EAL domain-like 22
FAD/NAD(P)-binding domain Folate-binding domain 22
alpha-helical ferredoxin Nucleotide-binding domain 21
Mechanosensitive channel protein MscS (YggB), transmembrane region Mechanosensitive channel protein MscS (YggB), C-terminal domain 22
GroEL-intermediate domain like GroEL apical domain-like 21
Ribosomal L11/L12e N-terminal domain Ribosomal protein L11, C-terminal domain 21
GAF domain-like PYP-like sensor domain (PAS domain) 22
CarD-like TRCF domain-like 22
Nucleotidyltransferase Nucleotidyltransferase substrate binding subunit/domain 22
N-utilization substance G protein NusG, N-terminal domain Translation proteins SH3-like domain 21
TPR-like TPR-like 22
HRDC-like HRDC-like 22
MurE/MurF N-terminal domain MurD-like peptide ligases, catalytic domain 21
Nucleotidyltransferase ACT-like 22
"Winged helix" DNA-binding domain Chorismate lyase-like 21
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 22
Type II DNA topoisomerase GyrA/ParC C-terminal domain-like 22
ClpP/crotonase 6-phosphogluconate dehydrogenase C-terminal domain-like 21
MurCD N-terminal domain MurD-like peptide ligases, catalytic domain 21
Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases 21
Cryptochrome/photolyase, N-terminal domain Cryptochrome/photolyase FAD-binding domain 21
Single hybrid motif Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 22
P-loop containing nucleoside triphosphate hydrolases Hypothetical protein YjiA, C-terminal domain 21
RmlC-like cupins Homeodomain-like 21
Galactose mutarotase-like E set domains 21
Methylglyoxal synthase-like Cytidine deaminase-like 11
PUA domain-like Nucleotidylyl transferase 11
C-terminal effector domain of the bipartite response regulators TPR-like 11
Adenine nucleotide alpha hydrolases-like Argininosuccinate synthetase, C-terminal domain 11
Class I glutamine amidotransferase-like Adenine nucleotide alpha hydrolases-like 11
Cupredoxins Cytochrome c 11
Transcription factor NusA, N-terminal domain Nucleic acid-binding proteins 11
Adenine nucleotide alpha hydrolases-like Homodimeric domain of signal transducing histidine kinase 11
PIN domain-like DNA/RNA polymerases 11
Nqo1 FMN-binding domain-like alpha-helical ferredoxin 11
2Fe-2S ferredoxin-like Ferredoxin reductase-like, C-terminal NADP-linked domain 11
CBS-domain pair MgtE membrane domain-like 11
Tubulin nucleotide-binding domain-like Tubulin C-terminal domain-like 11
NAD(P)-binding Rossmann-fold domains Succinyl-CoA synthetase domains 11
PheT/TilS domain Anticodon-binding domain of PheRS 11
ValRS/IleRS/LeuRS editing domain tRNA-binding arm 11
Protein kinase-like (PK-like) P-loop containing nucleoside triphosphate hydrolases 11
Nitrite/Sulfite reductase N-terminal domain-like Nitrite/Sulfite reductase N-terminal domain-like 11
Leukotriene A4 hydrolase N-terminal domain Acyl-CoA N-acyltransferases (Nat) 11
N-terminal domain of DnaB helicase P-loop containing nucleoside triphosphate hydrolases 11
FMN-linked oxidoreductases 4Fe-4S ferredoxins 11
Chaperone J-domain DnaJ/Hsp40 cysteine-rich domain 11
C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase Thermostable phytase (3-phytase) 11
P-loop containing nucleoside triphosphate hydrolases C-terminal UvrC-binding domain of UvrB 11
Acylphosphatase/BLUF domain-like YrdC/RibB 11
NAD(P)-binding Rossmann-fold domains 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
FabD/lysophospholipase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 11
Transmembrane di-heme cytochromes a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 11
Adenine nucleotide alpha hydrolases-like GAF domain-like 11
Cadherin-like Cadherin-like 11
Nucleic acid-binding proteins Rad51 N-terminal domain-like 11
Methionine synthase domain Methionine synthase activation domain-like 11
YhbC-like, N-terminal domain YhbC-like, C-terminal domain 11
YVTN repeat-like/Quinoprotein amine dehydrogenase alpha/beta-Hydrolases 11
P-loop containing nucleoside triphosphate hydrolases ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
PreATP-grasp domain post-HMGL domain-like 11
HPr-like Phosphoenolpyruvate/pyruvate domain 11
Ribosomal protein L6 Ribosomal protein L6 11
HAMP domain-like PYP-like sensor domain (PAS domain) 11
Phoshotransferase/anion transport protein Phosphohistidine domain 11
Histidine-containing phosphotransfer domain, HPT domain Histidine-containing phosphotransfer domain, HPT domain 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) PRTase-like 11
RBP11-like subunits of RNA polymerase C-terminal domain of RNA polymerase alpha subunit 11
2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain Alkaline phosphatase-like 11
PreATP-grasp domain Methylglyoxal synthase-like 11
Formyltransferase FMT C-terminal domain-like 11
Insert subdomain of RNA polymerase alpha subunit RBP11-like subunits of RNA polymerase 11
CBS-domain pair Inosine monophosphate dehydrogenase (IMPDH) 11
Pre-protein crosslinking domain of SecA Helical scaffold and wing domains of SecA 11
Nucleotidylyl transferase Alpha-L RNA-binding motif 11
CalX-like CalX-like 11
Photosystem II reaction centre subunit H, transmembrane region PRC-barrel domain 11
Glutathione synthetase ATP-binding domain-like Aldolase 11
PGBD-like L,D-transpeptidase catalytic domain-like 11
Actin-like ATPase domain Heat shock protein 70kD (HSP70), peptide-binding domain 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Nucleotidylyl transferase 11
Adenine nucleotide alpha hydrolases-like CinA-like 11
Cation efflux protein transmembrane domain-like Cation efflux protein cytoplasmic domain-like 11
RuvA domain 2-like RuvA domain 2-like 11
S-adenosyl-L-methionine-dependent methyltransferases NAD(P)-binding Rossmann-fold domains 11
TGS-like ACT-like 11
Phoshotransferase/anion transport protein Phosphoenolpyruvate/pyruvate domain 11
2Fe-2S ferredoxin-like Riboflavin synthase domain-like 11
Chaperone J-domain HSP40/DnaJ peptide-binding domain 11
TGS-like ThrRS/AlaRS common domain 11
Homeodomain-like Methylated DNA-protein cysteine methyltransferase domain 11
GIY-YIG endonuclease RuvA domain 2-like 11
HlyD-like secretion proteins Outer membrane efflux proteins (OEP) 11
Nucleic acid-binding proteins Putative DNA-binding domain 11
GAF domain-like Phosphohistidine domain 11
beta-lactamase/transpeptidase-like Penicillin-binding protein associated domain 11
Glutamine synthetase/guanido kinase GatB/YqeY motif 11
PGBD-like Trypsin-like serine proteases 11
Ribonuclease H-like RuvA domain 2-like 11
D-aminopeptidase, middle and C-terminal domains D-aminopeptidase, middle and C-terminal domains 11
S-adenosyl-L-methionine-dependent methyltransferases PYP-like sensor domain (PAS domain) 11
Urease metallochaperone UreE, N-terminal domain Urease metallochaperone UreE, C-terminal domain 11
Methylesterase CheB, C-terminal domain S-adenosyl-L-methionine-dependent methyltransferases 11
PDZ domain-like ClpP/crotonase 11
2Fe-2S ferredoxin-like ADC-like 11
5' to 3' exonuclease, C-terminal subdomain DNA/RNA polymerases 11
Methylesterase CheB, C-terminal domain Chemotaxis receptor methyltransferase CheR, N-terminal domain 11
Nucleic acid-binding proteins Prokaryotic type KH domain (KH-domain type II) 11
PTS system IIB component-like PTS system IIB component-like 11
P-loop containing nucleoside triphosphate hydrolases HRDC-like 11
Cytochrome c oxidase subunit II-like, transmembrane region Cupredoxins 11
S-adenosylmethionine synthetase S-adenosylmethionine synthetase 11
Phage tail proteins Phage fibre proteins 11
Rudiment single hybrid motif post-HMGL domain-like 11
Single hybrid motif Thiamin diphosphate-binding fold (THDP-binding) 11
Carbamoyl phosphate synthetase, small subunit N-terminal domain Class I glutamine amidotransferase-like 11
YebC-like PFL-like glycyl radical enzymes 11
Adenine nucleotide alpha hydrolases-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Rho N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 11
HD-domain/PDEase-like ACT-like 11
GIY-YIG endonuclease C-terminal UvrC-binding domain of UvrB 11
Radical SAM enzymes Nitrogenase accessory factor-like 11
Transmembrane di-heme cytochromes Multiheme cytochromes 11
Translation proteins Translation proteins 11
Insert subdomain of RNA polymerase alpha subunit C-terminal domain of RNA polymerase alpha subunit 11
P-loop containing nucleoside triphosphate hydrolases Prokaryotic type KH domain (KH-domain type II) 11
Fe-S cluster assembly (FSCA) domain-like P-loop containing nucleoside triphosphate hydrolases 11
gp5 N-terminal domain-like Phage fibre proteins 11
Adenine nucleotide alpha hydrolases-like GMP synthetase C-terminal dimerisation domain 11
Glycosyl hydrolase domain Protein kinase-like (PK-like) 11
PEP carboxykinase N-terminal domain PEP carboxykinase-like 11
Transcription factor NusA, N-terminal domain Prokaryotic type KH domain (KH-domain type II) 11
NusB-like S-adenosyl-L-methionine-dependent methyltransferases 11
Single hybrid motif Single hybrid motif 11
TerB-like Chaperone J-domain 11
Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 11
Ribosomal protein S5 domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
Dihydropteroate synthetase-like Cobalamin (vitamin B12)-binding domain 11
"Winged helix" DNA-binding domain HRDC-like 11
Thioesterase/thiol ester dehydrase-isomerase Isocitrate/Isopropylmalate dehydrogenase-like 11
HPr-like Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain 11
PUA domain-like Ribosomal protein S5 domain 2-like 11
TolB, N-terminal domain Tricorn protease N-terminal domain 11
Fe,Mn superoxide dismutase (SOD), N-terminal domain Fe,Mn superoxide dismutase (SOD), C-terminal domain 11
Nucleotidylyl transferase tRNA-binding arm 11
Glutathione synthetase ATP-binding domain-like Succinyl-CoA synthetase domains 11
P-loop containing nucleoside triphosphate hydrolases Helical scaffold and wing domains of SecA 11
Phage tail proteins gp5 N-terminal domain-like 11
P-loop containing nucleoside triphosphate hydrolases Adenine nucleotide alpha hydrolases-like 11
Carbamoyl phosphate synthetase, large subunit connection domain Methylglyoxal synthase-like 11
Actin-like ATPase domain HD-domain/PDEase-like 11
N-terminal domain of bifunctional PutA protein ALDH-like 11
Cobalamin (vitamin B12)-binding domain Methionine synthase activation domain-like 11
Riboflavin synthase domain-like Riboflavin synthase domain-like 11
PIN domain-like 5' to 3' exonuclease, C-terminal subdomain 11
DNA repair protein MutS, domain II P-loop containing nucleoside triphosphate hydrolases 11
Poly A polymerase C-terminal region-like ACT-like 11
P-loop containing nucleoside triphosphate hydrolases Signal peptide-binding domain 11
Ribonuclease H-like DNA/RNA polymerases 11
Ribosomal protein S5 domain 2-like Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 11
P-loop containing nucleoside triphosphate hydrolases Pre-protein crosslinking domain of SecA 11
Glutathione synthetase ATP-binding domain-like Phosphohistidine domain 11
PUA domain-like alpha/beta knot 11
S-adenosyl-L-methionine-dependent methyltransferases Putative methyltransferase TM0872, insert domain 11
Phase 1 flagellin Phase 1 flagellin 11
DNA ligase/mRNA capping enzyme, catalytic domain RuvA domain 2-like 11
Nucleotidyltransferase substrate binding subunit/domain Poly A polymerase C-terminal region-like 11
Nucleic acid-binding proteins GAD domain-like 11
Actin-like ATPase domain Heat shock protein 70kD (HSP70), C-terminal subdomain 11
Serine metabolism enzymes domain ACT-like 11
TK C-terminal domain-like Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 11
FAD-binding/transporter-associated domain-like Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain 11
TrmE connector domain P-loop containing nucleoside triphosphate hydrolases 11
Ribokinase-like Aldolase 11
Ribonuclease PH domain 2-like Ribonuclease PH domain 2-like 11
PurM C-terminal domain-like PurM C-terminal domain-like 11
Single hybrid motif TK C-terminal domain-like 11
Ribonuclease H-like HRDC-like 11
Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain MetI-like 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase DNA mismatch repair protein MutL 11
ATP-dependent DNA ligase DNA-binding domain DNA ligase/mRNA capping enzyme, catalytic domain 11
Dihydropteroate synthetase-like Nitrite and sulphite reductase 4Fe-4S domain-like 11
Carbamate kinase-like PUA domain-like 11
NAD(P)-binding Rossmann-fold domains LDH C-terminal domain-like 11
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 11
Obg GTP-binding protein N-terminal domain P-loop containing nucleoside triphosphate hydrolases 11
Aspartate/glutamate racemase Aspartate/glutamate racemase 11
Sigma3 and sigma4 domains of RNA polymerase sigma factors CheY-like 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
RuvA domain 2-like BRCT domain 11
SGNH hydrolase Caspase-like 11
(Trans)glycosidases Protein kinase-like (PK-like) 11
FMN-linked oxidoreductases FAD/NAD(P)-binding domain 11
Carbamate kinase-like ACT-like 11
P-loop containing nucleoside triphosphate hydrolases RecA protein, C-terminal domain 11
Chemotaxis receptor methyltransferase CheR, N-terminal domain PYP-like sensor domain (PAS domain) 11
PheT/TilS domain Class II aaRS and biotin synthetases 11
Nucleotidyltransferase TGS-like 11
Ribosomal protein S5 domain 2-like Nucleic acid-binding proteins 11
"Winged helix" DNA-binding domain S-adenosyl-L-methionine-dependent methyltransferases 11
AF0104/ALDC/Ptd012-like AF0104/ALDC/Ptd012-like 11
Ribonuclease PH domain 2-like Nucleic acid-binding proteins 11
DNA repair protein MutS, domain I P-loop containing nucleoside triphosphate hydrolases 11
Sensory domain-like Homodimeric domain of signal transducing histidine kinase 11
Glutathione synthetase ATP-binding domain-like Methylglyoxal synthase-like 11
Eukaryotic type KH-domain (KH-domain type I) Nucleic acid-binding proteins 11
Rho N-terminal domain-like Nucleic acid-binding proteins 11
N-terminal domain of MutM-like DNA repair proteins Glucocorticoid receptor-like (DNA-binding domain) 11
Ribosomal protein S5 domain 2-like GHMP Kinase, C-terminal domain 11
Methylesterase CheB, C-terminal domain PYP-like sensor domain (PAS domain) 11
alpha/beta-Hydrolases Galactose-binding domain-like 11
Tetrapyrrole methylase S-adenosyl-L-methionine-dependent methyltransferases 11
PreATP-grasp domain Carbamoyl phosphate synthetase, large subunit connection domain 11
Nucleotide-binding domain FAD-linked reductases, C-terminal domain 11
CheY-like PP2C-like 11
ThrRS/AlaRS common domain Class II aaRS ABD-related 11
Glutathione synthetase ATP-binding domain-like Glutathione synthetase ATP-binding domain-like 11
MOP-like MOP-like 11
Molybdenum cofactor-binding domain Molybdenum cofactor-binding domain 11
DNA ligase/mRNA capping enzyme, catalytic domain BRCT domain 11
Dihydropteroate synthetase-like Methionine synthase domain 11
Periplasmic binding protein-like II OmpA-like 11
GreA transcript cleavage protein, N-terminal domain FKBP-like 11
PYP-like sensor domain (PAS domain) Ribonuclease H-like 11
Ribosomal protein S5 domain 2-like DNA mismatch repair protein MutL 11
Nucleic acid-binding proteins Anticodon-binding domain of PheRS 11
E set domains E set domains 11
MalF N-terminal region-like MetI-like 11
ALDH-like ALDH-like 11
FAD/NAD(P)-binding domain 4Fe-4S ferredoxins 11
lambda repressor-like DNA-binding domains RmlC-like cupins 11
NTF2-like FAD/NAD(P)-binding domain 11
DeoB insert domain-like Alkaline phosphatase-like 11
Nucleotidyltransferase Nucleotidyltransferase 11
CheC-like Surface presentation of antigens (SPOA) 11
GAF domain-like Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain 11
HD-domain/PDEase-like TGS-like 11
P-loop containing nucleoside triphosphate hydrolases CBS-domain pair 11
NAD(P)-binding Rossmann-fold domains UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 11
P-loop containing nucleoside triphosphate hydrolases ACT-like 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
Rudiment single hybrid motif Aldolase 11
DNA/RNA polymerases Lesion bypass DNA polymerase (Y-family), little finger domain 11
Radical SAM enzymes RuvA domain 2-like 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) ThrRS/AlaRS common domain 11
4Fe-4S ferredoxins ADC-like 11
P-loop containing nucleoside triphosphate hydrolases Initiation factor IF2/eIF5b, domain 3 11
Class I glutamine amidotransferase-like GMP synthetase C-terminal dimerisation domain 11
Ribonuclease PH domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
Homeodomain-like Methylated DNA-protein cysteine methyltransferase, C-terminal domain 11
Putative DNA-binding domain Anticodon-binding domain of PheRS 11
Prokaryotic type I DNA topoisomerase Zinc beta-ribbon 11
YrdC/RibB RibA-like 11
Nucleotidylyl transferase Riboflavin kinase-like 11
PUA domain-like S-adenosyl-L-methionine-dependent methyltransferases 11
Aconitase iron-sulfur domain LeuD/IlvD-like 11
Tex N-terminal region-like Ribonuclease H-like 11
Homo-oligomeric flavin-containing Cys decarboxylases, HFCD CoaB-like 11
Nucleic acid-binding proteins BRCT domain 11
"Helical backbone" metal receptor "Helical backbone" metal receptor 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) FMN-linked oxidoreductases 11
DnaJ/Hsp40 cysteine-rich domain HSP40/DnaJ peptide-binding domain 11
RuvA domain 2-like JAB1/MPN domain 11
S13-like H2TH domain Glucocorticoid receptor-like (DNA-binding domain) 11
Hypothetical protein SAV1430 Fe-S cluster assembly (FSCA) domain-like 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain III 11
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 Nucleic acid-binding proteins 11
Prokaryotic type KH domain (KH-domain type II) Ribosomal protein S3 C-terminal domain 11
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 Eukaryotic type KH-domain (KH-domain type I) 11
C-terminal UvrC-binding domain of UvrB RuvA domain 2-like 11
ATP-dependent DNA ligase DNA-binding domain Nucleic acid-binding proteins 11
PreATP-grasp domain Aldolase 11
Bacterial muramidases Lysozyme-like 11
P-loop containing nucleoside triphosphate hydrolases TrpR-like 11
RuvA domain 2-like DNA helicase RuvA subunit, C-terminal domain 11
Tryptophan synthase beta subunit-like PLP-dependent enzymes ACT-like 11
MgtE N-terminal domain-like CBS-domain pair 11
NagB/RpiA/CoA transferase-like NagB/RpiA/CoA transferase-like 11
DNA repair protein MutS, domain II DNA repair protein MutS, domain III 11
FAD-linked reductases, C-terminal domain Aminomethyltransferase beta-barrel domain 11
FAD-linked reductases, C-terminal domain Folate-binding domain 11
L9 N-domain-like Ribosomal protein L9 C-domain 11
6-phosphogluconate dehydrogenase C-terminal domain-like UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 11
NagB/RpiA/CoA transferase-like D-ribose-5-phosphate isomerase (RpiA), lid domain 11
PIN domain-like Ribonuclease H-like 11
Glutathione synthetase ATP-binding domain-like post-HMGL domain-like 11
"Winged helix" DNA-binding domain MOP-like 11
Metallo-hydrolase/oxidoreductase Flavoproteins 11
Putative DNA-binding domain Class II aaRS and biotin synthetases 11
HPr-like Phosphohistidine domain 11
Formate/glycerate dehydrogenase catalytic domain-like ACT-like 11
Prokaryotic type KH domain (KH-domain type II) Prokaryotic type KH domain (KH-domain type II) 11
DNA topoisomerase I domain DNA breaking-rejoining enzymes 11
Tex N-terminal region-like Nucleic acid-binding proteins 11
Nucleic acid-binding proteins DNA helicase RuvA subunit, C-terminal domain 11
Trimeric LpxA-like enzymes Trimeric LpxA-like enzymes 11
Caspase-like HCP-like 11
beta-lactamase/transpeptidase-like D-aminopeptidase, middle and C-terminal domains 11
Adenine nucleotide alpha hydrolases-like DHS-like NAD/FAD-binding domain 11
Elongation factor Ts (EF-Ts), dimerisation domain Elongation factor Ts (EF-Ts), dimerisation domain 11
ParB/Sulfiredoxin S-adenosyl-L-methionine-dependent methyltransferases 11
2Fe-2S ferredoxin-like FAD-binding/transporter-associated domain-like 11
Heme-dependent catalase-like Class I glutamine amidotransferase-like 11
Periplasmic binding protein-like II ACT-like 11
Ribonuclease H-like Nucleic acid-binding proteins 11
N-terminal domain of bifunctional PutA protein FAD-linked oxidoreductase 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Alpha subunit of glutamate synthase, C-terminal domain 11
Translation proteins Initiation factor IF2/eIF5b, domain 3 11
Nitrite and sulphite reductase 4Fe-4S domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 11
PheT/TilS domain Putative DNA-binding domain 11
Phoshotransferase/anion transport protein Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain 11
Nucleotide-diphospho-sugar transferases RmlC-like cupins 11
Phosphoenolpyruvate/pyruvate domain PK C-terminal domain-like 11
dsRNA-binding domain-like Ribosomal protein S5 domain 2-like 11
Dihydropteroate synthetase-like Methionine synthase activation domain-like 11
LysM domain Duplicated hybrid motif 11
PPK N-terminal domain-like PHP14-like 11
NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains 11
PK beta-barrel domain-like PK C-terminal domain-like 11
2Fe-2S ferredoxin-like CO dehydrogenase flavoprotein C-terminal domain-like 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain II 11
Ribbon-helix-helix ACT-like 11
"Winged helix" DNA-binding domain LexA/Signal peptidase 11
CalX-like beta-Roll 11
Translation proteins PRC-barrel domain 11
CorA soluble domain-like Magnesium transport protein CorA, transmembrane region 11
P-loop containing nucleoside triphosphate hydrolases Homodimeric domain of signal transducing histidine kinase 11
Class II aaRS and biotin synthetases Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) 11
CheY-like Nucleotide cyclase 11
DNA clamp DNA clamp 11
Ribonuclease PH domain 2-like Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 11
vWA-like SMAD/FHA domain 11
Aldolase post-HMGL domain-like 11
5' to 3' exonuclease, C-terminal subdomain Ribonuclease H-like 11
MgtE N-terminal domain-like MgtE membrane domain-like 11
Cytidine deaminase-like Dihydrofolate reductase-like 11
Sigma3 and sigma4 domains of RNA polymerase sigma factors NagB/RpiA/CoA transferase-like 11
TPR-like UDP-Glycosyltransferase/glycogen phosphorylase 11
Zinc beta-ribbon DNA primase core 11
Galactose-binding domain-like Galactose-binding domain-like 11
GAF domain-like Phosphoenolpyruvate/pyruvate domain 11
Thioesterase/thiol ester dehydrase-isomerase Thioesterase/thiol ester dehydrase-isomerase 11
Nqo5-like HydB/Nqo4-like 11
TGS-like Class II aaRS and biotin synthetases 11
post-HMGL domain-like Single hybrid motif 11
Thioredoxin-like TPR-like 11
Phage tail proteins Phage tail proteins 11
Coiled-coil domain of nucleotide exchange factor GrpE Head domain of nucleotide exchange factor GrpE 11
CO dehydrogenase ISP C-domain like FAD-binding/transporter-associated domain-like 11
lambda repressor-like DNA-binding domains S-adenosyl-L-methionine-dependent methyltransferases 11
NAD(P)-binding Rossmann-fold domains TrkA C-terminal domain-like 11
Resolvase-like Homeodomain-like 11
Trigger factor ribosome-binding domain FKBP-like 11
ACT-like Formyltransferase 11
HCP-like HCP-like 11
Periplasmic binding protein-like II Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain 11
FAD/NAD(P)-binding domain cAMP-binding domain-like 11
Phage fibre proteins Phage fibre proteins 11
FAD-linked oxidoreductase ALDH-like 11
RelE-like lambda repressor-like DNA-binding domains 11
HD-domain/PDEase-like Nucleotidyltransferase 11
TGS-like Class II aaRS ABD-related 11
Zinc beta-ribbon Prokaryotic SH3-related domain 11
Class II aaRS and biotin synthetases Translation proteins 11
dUTPase-like dUTPase-like 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Adenine nucleotide alpha hydrolases-like 11
Glutathione synthetase ATP-binding domain-like Carbamoyl phosphate synthetase, large subunit connection domain 11
C-terminal effector domain of the bipartite response regulators alpha/beta-Hydrolases 11
Glycoside hydrolase/deacetylase UraD-Like 11
PPK N-terminal domain-like Phospholipase D/nuclease 11
UBA-like Elongation factor Ts (EF-Ts), dimerisation domain 11
Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain Pyrimidine nucleoside phosphorylase C-terminal domain 11
Nitrite/Sulfite reductase N-terminal domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 11
RNase III domain-like dsRNA-binding domain-like 11
Domain of the SRP/SRP receptor G-proteins P-loop containing nucleoside triphosphate hydrolases 11
Nucleotidyltransferase substrate binding subunit/domain Nucleotidyltransferase substrate binding subunit/domain 11
CO dehydrogenase ISP C-domain like CO dehydrogenase flavoprotein C-terminal domain-like 11
Class II aaRS and biotin synthetases GAD domain-like 11
E set domains Cadherin-like 11
N-terminal domain of MutM-like DNA repair proteins S13-like H2TH domain 11
Thiamin pyrophosphokinase, catalytic domain Thiamin pyrophosphokinase, substrate-binding domain 11
GAF domain-like Homodimeric domain of signal transducing histidine kinase 11
Glucocorticoid receptor-like (DNA-binding domain) P-loop containing nucleoside triphosphate hydrolases 11
Nucleotidylyl transferase P-loop containing nucleoside triphosphate hydrolases 11
HMA, heavy metal-associated domain HMA, heavy metal-associated domain 11
cAMP-binding domain-like CBS-domain pair 11
Carbon-nitrogen hydrolase Adenine nucleotide alpha hydrolases-like 11
PreATP-grasp domain PreATP-grasp domain 11
Hsp33 domain HSP33 redox switch-like 11
Trigger factor ribosome-binding domain Triger factor/SurA peptide-binding domain-like 11
Concanavalin A-like lectins/glucanases beta-Roll 11
Sigma3 and sigma4 domains of RNA polymerase sigma factors NTF2-like 11
NAD(P)-binding Rossmann-fold domains Serine metabolism enzymes domain 11
FMN-binding split barrel UbiD C-terminal domain-like 11
FAD-linked reductases, C-terminal domain 4Fe-4S ferredoxins 11
DNA-glycosylase Nudix 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Nucleotidylyl transferase 11
Glutathione synthetase ATP-binding domain-like Phosphoenolpyruvate/pyruvate domain 11
PGBD-like Hedgehog/DD-peptidase 11
SufE/NifU Fe-S cluster assembly (FSCA) domain-like 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) Translation proteins 11
Trypsin-like serine proteases SMAD/FHA domain 11
DnaK suppressor protein DksA, alpha-hairpin domain Glucocorticoid receptor-like (DNA-binding domain) 11
Transcription factor NusA, N-terminal domain Rad51 N-terminal domain-like 11
Macro domain-like Zn-dependent exopeptidases 11
DNA repair protein MutS, domain III P-loop containing nucleoside triphosphate hydrolases 11
PHP14-like Phospholipase D/nuclease 11
P-loop containing nucleoside triphosphate hydrolases vWA-like 11
L30e-like alpha/beta knot 11
Nucleotidyltransferase substrate binding subunit/domain ACT-like 11
Tex N-terminal region-like RuvA domain 2-like 11
PLP-dependent transferases PLP-dependent transferases 11
Phospholipase D/nuclease P-loop containing nucleoside triphosphate hydrolases 11
Metalloproteases ("zincins"), catalytic domain beta-Roll 11
Sigma2 domain of RNA polymerase sigma factors NTF2-like 11
2Fe-2S ferredoxin-like Actin-like ATPase domain 11
Nucleic acid-binding proteins PheT/TilS domain 11
P-loop containing nucleoside triphosphate hydrolases FtsH protease domain-like 11
PH0987 N-terminal domain-like Cyclophilin-like 11
PurM N-terminal domain-like PurM N-terminal domain-like 11
all-alpha NTP pyrophosphatases all-alpha NTP pyrophosphatases 11
Heat shock protein 70kD (HSP70), peptide-binding domain Heat shock protein 70kD (HSP70), C-terminal subdomain 11
FMN-linked oxidoreductases Alpha subunit of glutamate synthase, C-terminal domain 11
HSP40/DnaJ peptide-binding domain HSP40/DnaJ peptide-binding domain 11
P-loop containing nucleoside triphosphate hydrolases TGS-like 11
Aldolase Single hybrid motif 11
Nucleoside hydrolase Galactose-binding domain-like 11
Nucleic acid-binding proteins ArfGap/RecO-like zinc finger 11
YlxR-like L30e-like 11
EspE N-terminal domain-like Nucleotide-diphospho-sugar transferases 11
(Trans)glycosidases NAD(P)-binding Rossmann-fold domains 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain ACT-like 11
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Pyrimidine nucleoside phosphorylase C-terminal domain 11
Globin-like Methyl-accepting chemotaxis protein (MCP) signaling domain 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) SIS domain 11
Phoshotransferase/anion transport protein HPr-like 11
Leukotriene A4 hydrolase N-terminal domain Metalloproteases ("zincins"), catalytic domain 11
PYP-like sensor domain (PAS domain) Homeodomain-like 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases tRNA-binding arm 11
Translation initiation factor IF3, N-terminal domain Translation initiation factor IF3, C-terminal domain 11
Prokaryotic type KH domain (KH-domain type II) Rad51 N-terminal domain-like 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
Class II aaRS and biotin synthetases Anticodon-binding domain of PheRS 11
TPR-like P-loop containing nucleoside triphosphate hydrolases 11
Formate/glycerate dehydrogenase catalytic domain-like Serine metabolism enzymes domain 11

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