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Domain combination pairs in Brevibacillus brevis NBRC 100599

All pairs of domain combinations at the superfamily level are listed here.
The identification of domain pairs does not account for the possibility of non-contiguous domains. Inserted, or interlaced, domains are seen as having a simple pair ordering.

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Adjacent domain pairs graph

Graph of adjacent domain pairs.


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Domain combination pairs

816 domain combination pairs.
Click on a column heading to sort that column, or the 'View' button to see domain architetures for that domain pair combination.

Superfamily (N) Superfamily (C) Number of occurrances Number unique
Homodimeric domain of signal transducing histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 5815
Sigma2 domain of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 505
CheY-like C-terminal effector domain of the bipartite response regulators 433
P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases 3311
Homeodomain-like Tetracyclin repressor-like, C-terminal domain 311
"Winged helix" DNA-binding domain Periplasmic binding protein-like II 281
HAMP domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 257
HAMP domain-like Homodimeric domain of signal transducing histidine kinase 236
CoA-dependent acyltransferases CoA-dependent acyltransferases 2220
Multidrug resistance efflux transporter EmrE Multidrug resistance efflux transporter EmrE 222
Zn-dependent exopeptidases Bacterial exopeptidase dimerisation domain 221
Metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases 225
NAD(P)-binding Rossmann-fold domains 6-phosphogluconate dehydrogenase C-terminal domain-like 224
CoA-dependent acyltransferases ACP-like 2119
CoA-dependent acyltransferases Acetyl-CoA synthetase-like 2119
Acetyl-CoA synthetase-like ACP-like 2119
P-loop containing nucleoside triphosphate hydrolases Homeodomain-like 196
PYP-like sensor domain (PAS domain) ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 1810
NAD(P)-binding Rossmann-fold domains Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 184
"Winged helix" DNA-binding domain PLP-dependent transferases 181
ABC transporter transmembrane region P-loop containing nucleoside triphosphate hydrolases 173
Homeodomain-like Homeodomain-like 1711
ACP-like ACP-like 1616
PYP-like sensor domain (PAS domain) P-loop containing nucleoside triphosphate hydrolases 155
Actin-like ATPase domain Actin-like ATPase domain 155
Thiolase-like Thiolase-like 156
PYP-like sensor domain (PAS domain) Homeodomain-like 123
HlyD-like secretion proteins HlyD-like secretion proteins 125
PYP-like sensor domain (PAS domain) Homodimeric domain of signal transducing histidine kinase 127
PreATP-grasp domain Glutathione synthetase ATP-binding domain-like 125
Sensory domain-like Methyl-accepting chemotaxis protein (MCP) signaling domain 115
FAD/NAD(P)-binding domain FAD-linked reductases, C-terminal domain 102
P-loop containing nucleoside triphosphate hydrolases MOP-like 101
Acetyl-CoA synthetase-like Acetyl-CoA synthetase-like 1010
cAMP-binding domain-like "Winged helix" DNA-binding domain 81
PYP-like sensor domain (PAS domain) PYP-like sensor domain (PAS domain) 86
lambda repressor-like DNA-binding domains TPR-like 82
ACP-like Thiolase-like 88
GroES-like NAD(P)-binding Rossmann-fold domains 81
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 74
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 74
Sensory domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 74
C-terminal effector domain of the bipartite response regulators TPR-like 74
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB transmembrane domain 74
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheY-like 75
Nucleotidylyl transferase Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 77
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB transmembrane domain 74
"Winged helix" DNA-binding domain GAF domain-like 71
Thiamin diphosphate-binding fold (THDP-binding) TK C-terminal domain-like 73
Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain 74
P-loop containing nucleoside triphosphate hydrolases Translation proteins 76
"Winged helix" DNA-binding domain NagB/RpiA/CoA transferase-like 71
Acyl-CoA dehydrogenase NM domain-like Acyl-CoA dehydrogenase C-terminal domain-like 63
Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 61
MurD-like peptide ligases, catalytic domain MurD-like peptide ligases, peptide-binding domain 63
Acyl-CoA N-acyltransferases (Nat) Acyl-CoA N-acyltransferases (Nat) 62
Homeodomain-like "Helical backbone" metal receptor 63
P-loop containing nucleoside triphosphate hydrolases "Winged helix" DNA-binding domain 65
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 63
Penicillin binding protein dimerisation domain beta-lactamase/transpeptidase-like 64
CheY-like Homeodomain-like 64
Glutathione synthetase ATP-binding domain-like Rudiment single hybrid motif 62
TPR-like P-loop containing nucleoside triphosphate hydrolases 64
ACP-like NAD(P)-binding Rossmann-fold domains 66
P-loop containing nucleoside triphosphate hydrolases Ribosomal protein S5 domain 2-like 66
Invasin/intimin cell-adhesion fragments Invasin/intimin cell-adhesion fragments 66
ACP-like S-adenosyl-L-methionine-dependent methyltransferases 66
Aminoacid dehydrogenase-like, N-terminal domain NAD(P)-binding Rossmann-fold domains 61
Enolase N-terminal domain-like Enolase C-terminal domain-like 61
TPR-like TPR-like 66
PreATP-grasp domain Rudiment single hybrid motif 62
"Winged helix" DNA-binding domain Dimeric alpha+beta barrel 61
HAMP domain-like PYP-like sensor domain (PAS domain) 53
"Winged helix" DNA-binding domain GntR ligand-binding domain-like 51
6-phosphogluconate dehydrogenase C-terminal domain-like UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 51
NAD(P)-binding Rossmann-fold domains UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 51
Creatinase/prolidase N-terminal domain Creatinase/aminopeptidase 51
PLP-binding barrel Alanine racemase C-terminal domain-like 52
NAD(P)-binding Rossmann-fold domains S-adenosyl-L-methionine-dependent methyltransferases 55
EAL domain-like Nucleotide cyclase 54
GAF domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 54
Thiolase-like NAD(P)-binding Rossmann-fold domains 55
CheY-like P-loop containing nucleoside triphosphate hydrolases 53
Translation proteins EF-G C-terminal domain-like 54
Class II aaRS and biotin synthetases Class II aaRS ABD-related 54
FAD/NAD(P)-binding domain FAD/NAD-linked reductases, dimerisation (C-terminal) domain 51
Sensory domain-like PYP-like sensor domain (PAS domain) 52
lambda repressor-like DNA-binding domains RmlC-like cupins 51
Homeodomain-like SIS domain 51
Thiolase-like S-adenosyl-L-methionine-dependent methyltransferases 55
P-loop containing nucleoside triphosphate hydrolases EF-G C-terminal domain-like 54
PYP-like sensor domain (PAS domain) Nucleotide cyclase 54
Sensory domain-like Sporulation response regulatory protein Spo0B 41
Calcium ATPase, transduction domain A Calcium ATPase, transmembrane domain M 44
DNA ligase/mRNA capping enzyme, catalytic domain Nucleic acid-binding proteins 42
Metallo-dependent phosphatases 5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain 44
ValRS/IleRS/LeuRS editing domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 44
DPP6 N-terminal domain-like alpha/beta-Hydrolases 42
Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) 42
Phosphohistidine domain Phosphoenolpyruvate/pyruvate domain 42
Cation efflux protein transmembrane domain-like Cation efflux protein cytoplasmic domain-like 41
NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains 44
Single hybrid motif CoA-dependent acyltransferases 42
PYP-like sensor domain (PAS domain) Sporulation response regulatory protein Spo0B 41
ValRS/IleRS/LeuRS editing domain Nucleotidylyl transferase 44
Nucleic acid-binding proteins Class II aaRS and biotin synthetases 43
Aminopeptidase/glucanase lid domain Zn-dependent exopeptidases 41
lambda repressor-like DNA-binding domains Periplasmic binding protein-like I 41
Sensory domain-like HAMP domain-like 44
Homodimeric domain of signal transducing histidine kinase CheY-like 43
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Ribosomal protein S5 domain 2-like 43
CBS-domain pair FAD-binding/transporter-associated domain-like 41
Sporulation response regulatory protein Spo0B ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 41
Regulatory protein AraC Homeodomain-like 42
EF-G C-terminal domain-like EF-G C-terminal domain-like 43
Single hybrid motif Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 42
Phosphoglucomutase, first 3 domains Phosphoglucomutase, C-terminal domain 44
PTS-regulatory domain, PRD PTS-regulatory domain, PRD 44
ACT-like ACT-like 42
NAD(P)-binding Rossmann-fold domains LDH C-terminal domain-like 41
P-loop containing nucleoside triphosphate hydrolases C-terminal effector domain of the bipartite response regulators 42
PYP-like sensor domain (PAS domain) EAL domain-like 43
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex CoA-dependent acyltransferases 42
Formate/glycerate dehydrogenase catalytic domain-like NAD(P)-binding Rossmann-fold domains 42
HAD-like Calcium ATPase, transmembrane domain M 44
Collagen-binding domain Collagen-binding domain 44
Calcium ATPase, transduction domain A HAD-like 44
Alpha-L RNA-binding motif Pseudouridine synthase 41
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 32
Thiolase-like CoA-dependent acyltransferases 33
Galactose-binding domain-like Homodimeric domain of signal transducing histidine kinase 32
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Adenine nucleotide alpha hydrolases-like 31
Nucleic acid-binding proteins P-loop containing nucleoside triphosphate hydrolases 33
Homeodomain-like Probable bacterial effector-binding domain 31
Galactose-binding domain-like CheY-like 32
P-loop containing nucleoside triphosphate hydrolases post-AAA+ oligomerization domain-like 32
PLP-dependent transferases Ornithine decarboxylase C-terminal domain 31
RuvA domain 2-like Nucleic acid-binding proteins 33
Nucleic acid-binding proteins Nucleic acid-binding proteins 33
Galactose-binding domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 32
CorA soluble domain-like Magnesium transport protein CorA, transmembrane region 31
Cobalamin (vitamin B12)-dependent enzymes Cobalamin (vitamin B12)-binding domain 32
Copper amine oxidase, domain N Copper amine oxidase, domain N 32
Lysozyme-like beta-lactamase/transpeptidase-like 33
Trypsin-like serine proteases PDZ domain-like 33
Regulatory protein AraC "Helical backbone" metal receptor 31
Acetyl-CoA synthetase-like NAD(P)-binding Rossmann-fold domains 33
Aldolase 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 31
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphoenolpyruvate/pyruvate domain 31
Carbamate kinase-like ACT-like 31
Formate dehydrogenase/DMSO reductase, domains 1-3 ADC-like 31
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphohistidine domain 31
P-loop containing nucleoside triphosphate hydrolases Class I glutamine amidotransferase-like 32
NAD(P)-binding Rossmann-fold domains ACT-like 33
PurM N-terminal domain-like PurM C-terminal domain-like 32
Acetyl-CoA synthetase-like Thiolase-like 33
Methylated DNA-protein cysteine methyltransferase domain Methylated DNA-protein cysteine methyltransferase, C-terminal domain 32
Fibronectin type III Carbohydrate binding domain 33
Phosphoglucomutase, first 3 domains Phosphoglucomutase, first 3 domains 33
FabD/lysophospholipase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 32
MetI-like MetI-like 31
Nucleotide-diphospho-sugar transferases Trimeric LpxA-like enzymes 32
Fe,Mn superoxide dismutase (SOD), N-terminal domain Fe,Mn superoxide dismutase (SOD), C-terminal domain 32
Cytochrome c oxidase subunit II-like, transmembrane region Cupredoxins 33
CoA-dependent acyltransferases NAD(P)-binding Rossmann-fold domains 33
Globin-like Methyl-accepting chemotaxis protein (MCP) signaling domain 33
Diaminopimelate epimerase-like Diaminopimelate epimerase-like 31
DNA repair protein MutS, domain III P-loop containing nucleoside triphosphate hydrolases 33
Aspartate/glutamate racemase Aspartate/glutamate racemase 31
LuxS/MPP-like metallohydrolase LuxS/MPP-like metallohydrolase 31
MalF N-terminal region-like MetI-like 31
N-terminal domain of DnaB helicase P-loop containing nucleoside triphosphate hydrolases 31
Ribosomal protein S5 domain 2-like EF-G C-terminal domain-like 33
N-terminal domain of alpha and beta subunits of F1 ATP synthase P-loop containing nucleoside triphosphate hydrolases 21
CBS-domain pair Nucleotide cyclase 22
HMA, heavy metal-associated domain Calcium ATPase, transmembrane domain M 22
Subtilisin-like Fibronectin type III 22
HMA, heavy metal-associated domain Calcium ATPase, transduction domain A 22
Glutathione synthetase ATP-binding domain-like Glutathione synthetase ATP-binding domain-like 21
Ribonuclease H-like Nucleic acid-binding proteins 22
CheY-like TPR-like 21
Chaperone J-domain TPR-like 22
P-loop containing nucleoside triphosphate hydrolases FtsH protease domain-like 22
SMAD/FHA domain C-terminal effector domain of the bipartite response regulators 21
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 21
tRNA-binding arm Class II aaRS and biotin synthetases 21
Nicotinate/Quinolinate PRTase N-terminal domain-like Nicotinate/Quinolinate PRTase C-terminal domain-like 21
ParB/Sulfiredoxin S-adenosyl-L-methionine-dependent methyltransferases 21
4'-phosphopantetheinyl transferase 4'-phosphopantetheinyl transferase 22
Penicillin binding protein dimerisation domain Penicillin-binding protein 2x (pbp-2x), c-terminal domain 22
S-adenosyl-L-methionine-dependent methyltransferases S-adenosyl-L-methionine-dependent methyltransferases 22
Nucleic acid-binding proteins S-adenosyl-L-methionine-dependent methyltransferases 21
DNA/RNA polymerases Lesion bypass DNA polymerase (Y-family), little finger domain 22
Bacillus cereus metalloprotein-like Bacillus cereus metalloprotein-like 21
(Trans)glycosidases Fibronectin type III 22
PDZ domain-like ClpP/crotonase 22
N-utilization substance G protein NusG, N-terminal domain Translation proteins SH3-like domain 21
MurE/MurF N-terminal domain MurD-like peptide ligases, catalytic domain 21
Sensory domain-like Homodimeric domain of signal transducing histidine kinase 22
Cupredoxins Cupredoxins 21
beta-lactamase/transpeptidase-like Penicillin-binding protein associated domain 22
MFS general substrate transporter MFS general substrate transporter 22
Translation proteins ThrRS/AlaRS common domain 22
LmbE-like Class I glutamine amidotransferase-like 22
Adenine nucleotide alpha hydrolases-like Adenine nucleotide alpha hydrolases-like 22
Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like 22
vWA-like vWA-like 22
L30e-like alpha/beta knot 21
Glutathione synthetase ATP-binding domain-like Methylglyoxal synthase-like 21
Translation proteins Ribosomal protein S5 domain 2-like 22
ClpP/crotonase ClpP/crotonase 21
P-loop containing nucleoside triphosphate hydrolases C-terminal domain of alpha and beta subunits of F1 ATP synthase 21
Ribosomal protein S5 domain 2-like Type II DNA topoisomerase 21
Translation proteins SH3-like domain Nucleic acid-binding proteins 22
FAD-binding/transporter-associated domain-like FAD-linked oxidases, C-terminal domain 21
FAD/NAD(P)-binding domain FAD/NAD(P)-binding domain 22
MurCD N-terminal domain MurD-like peptide ligases, peptide-binding domain 21
"Winged helix" DNA-binding domain Actin-like ATPase domain 21
Glycoside hydrolase/deacetylase Glycoside hydrolase/deacetylase 21
Carbamoyl phosphate synthetase, large subunit connection domain Methylglyoxal synthase-like 21
PreATP-grasp domain Methylglyoxal synthase-like 21
Ribosomal protein S5 domain 2-like GHMP Kinase, C-terminal domain 21
GAF domain-like P-loop containing nucleoside triphosphate hydrolases 22
Copper amine oxidase, domain N (Trans)glycosidases 21
Putative DNA-binding domain Probable bacterial effector-binding domain 21
Homeodomain-like Ribonuclease H-like 21
Acetyl-CoA synthetase-like S-adenosyl-L-methionine-dependent methyltransferases 22
PreATP-grasp domain PreATP-grasp domain 21
CheY-like "Winged helix" DNA-binding domain 21
CheC-like Surface presentation of antigens (SPOA) 22
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase C-terminal effector domain of the bipartite response regulators 21
"Winged helix" DNA-binding domain PTS-regulatory domain, PRD 22
Glutathione synthetase ATP-binding domain-like Carbamoyl phosphate synthetase, large subunit connection domain 21
Putative DNA-binding domain Antibiotic binding domain of TipA-like multidrug resistance regulators 22
"Winged helix" DNA-binding domain CBS-domain pair 22
N-terminal domain of MutM-like DNA repair proteins S13-like H2TH domain 21
"Winged helix" DNA-binding domain Thioesterase/thiol ester dehydrase-isomerase 22
N-terminal domain of MutM-like DNA repair proteins Glucocorticoid receptor-like (DNA-binding domain) 21
PIN domain-like 5' to 3' exonuclease, C-terminal subdomain 22
Putative DNA-binding domain Putative DNA-binding domain 21
Subtilisin-like Invasin/intimin cell-adhesion fragments 22
Carbamoyl phosphate synthetase, small subunit N-terminal domain Class I glutamine amidotransferase-like 21
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Type II DNA topoisomerase 21
Class II aaRS and biotin synthetases ThrRS/AlaRS common domain 22
Translation initiation factor IF3, N-terminal domain Translation initiation factor IF3, C-terminal domain 21
Invasin/intimin cell-adhesion fragments Fibronectin type III 22
CoA-dependent acyltransferases S-adenosyl-L-methionine-dependent methyltransferases 22
Sensory domain-like Nucleotide cyclase 22
Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases 21
PUA domain-like Nucleotidylyl transferase 21
beta-lactamase/transpeptidase-like Penicillin-binding protein 2x (pbp-2x), c-terminal domain 22
CBS-domain pair Inosine monophosphate dehydrogenase (IMPDH) 21
Rhodanese/Cell cycle control phosphatase Rhodanese/Cell cycle control phosphatase 22
P-loop containing nucleoside triphosphate hydrolases Glucocorticoid receptor-like (DNA-binding domain) 22
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 21
Nucleotide-diphospho-sugar transferases TPR-like 22
HMA, heavy metal-associated domain HAD-like 22
GAF domain-like Homodimeric domain of signal transducing histidine kinase 22
Ribosomal protein S5 domain 2-like Ribonuclease PH domain 2-like 22
Rhodanese/Cell cycle control phosphatase Metallo-hydrolase/oxidoreductase 22
FAD-binding/transporter-associated domain-like Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain 21
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 22
PTS-regulatory domain, PRD PTS system IIB component-like 22
S13-like H2TH domain Glucocorticoid receptor-like (DNA-binding domain) 21
PreATP-grasp domain Carbamoyl phosphate synthetase, large subunit connection domain 21
Type II DNA topoisomerase GyrA/ParC C-terminal domain-like 21
Nudix "Winged helix" DNA-binding domain 21
FKBP-like Triger factor/SurA peptide-binding domain-like 22
Thiamin diphosphate-binding fold (THDP-binding) DHS-like NAD/FAD-binding domain 21
Aldolase post-HMGL domain-like 22
Periplasmic binding protein-like II Periplasmic binding protein-like II 21
Actin-like ATPase domain Heat shock protein 70kD (HSP70), peptide-binding domain 22
Glutamine synthetase, N-terminal domain Glutamine synthetase/guanido kinase 21
MurE/MurF N-terminal domain MurD-like peptide ligases, peptide-binding domain 21
MurCD N-terminal domain MurD-like peptide ligases, catalytic domain 21
N-terminal nucleophile aminohydrolases (Ntn hydrolases) SIS domain 21
N-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase 21
Restriction endonuclease-like Zinc beta-ribbon 21
P-loop containing nucleoside triphosphate hydrolases ACT-like 21
Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 21
Serine metabolism enzymes domain ACT-like 22
N-acetylmuramoyl-L-alanine amidase-like Copper amine oxidase, domain N 21
Class I glutamine amidotransferase-like LD-carboxypeptidase A C-terminal domain-like 21
GAF domain-like Nucleotide cyclase 22
(Trans)glycosidases Carbohydrate binding domain 22
Riboflavin synthase domain-like Ferredoxin reductase-like, C-terminal NADP-linked domain 22
Phoshotransferase/anion transport protein PTS system IIB component-like 22
Adenine nucleotide alpha hydrolases-like DHS-like NAD/FAD-binding domain 21
PA domain Subtilisin-like 21
P-loop containing nucleoside triphosphate hydrolases CBS-domain pair 21
AbrB/MazE/MraZ-like GAF domain-like 11
Mechanosensitive channel protein MscS (YggB), transmembrane region Sm-like ribonucleoproteins 11
Obg GTP-binding protein N-terminal domain Obg GTP-binding protein C-terminal domain 11
Pyruvate-ferredoxin oxidoreductase, PFOR, domain III TK C-terminal domain-like 11
Histidine-containing phosphotransfer domain, HPT domain Nucleotide cyclase 11
P-loop containing nucleoside triphosphate hydrolases CarD-like 11
NAD(P)-binding Rossmann-fold domains Homeodomain-like 11
CBS-domain pair Nucleotide-diphospho-sugar transferases 11
beta-Galactosidase/glucuronidase domain (Trans)glycosidases 11
ThrRS/AlaRS common domain Class II aaRS ABD-related 11
RmlC-like cupins Homeodomain-like 11
Histidine-containing phosphotransfer domain, HPT domain CheY-binding domain of CheA 11
CheY-like CheY-like 11
Fibronectin type III RCC1/BLIP-II 11
RuvA domain 2-like DNA helicase RuvA subunit, C-terminal domain 11
Protein kinase-like (PK-like) P-loop containing nucleoside triphosphate hydrolases 11
HprK N-terminal domain-like Thioesterase/thiol ester dehydrase-isomerase 11
Galactose-binding domain-like (Trans)glycosidases 11
CoA-dependent acyltransferases beta-lactamase/transpeptidase-like 11
Bacterial adhesins Cna protein B-type domain 11
NAD(P)-binding Rossmann-fold domains TrkA C-terminal domain-like 11
PP2C-like TPR-like 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases tRNA-binding arm 11
PYP-like sensor domain (PAS domain) "Winged helix" DNA-binding domain 11
SirA-like Rhodanese/Cell cycle control phosphatase 11
MesJ substrate recognition domain-like PheT/TilS domain 11
Ribosomal protein S5 domain 2-like DNA mismatch repair protein MutL 11
Acetyl-CoA synthetase-like beta-lactamase/transpeptidase-like 11
P-loop containing nucleoside triphosphate hydrolases Metallo-dependent phosphatases 11
Metallo-dependent phosphatases DNA ligase/mRNA capping enzyme, catalytic domain 11
Copper amine oxidase, domain N Zn-dependent exopeptidases 11
P-loop containing nucleoside triphosphate hydrolases Pre-protein crosslinking domain of SecA 11
RuvA domain 2-like BRCT domain 11
Adenine nucleotide alpha hydrolases-like P-loop containing nucleoside triphosphate hydrolases 11
PKD domain Collagen-binding domain 11
PIN domain-like DNA/RNA polymerases 11
Nucleic acid-binding proteins HD-domain/PDEase-like 11
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Pyrimidine nucleoside phosphorylase C-terminal domain 11
Purine and uridine phosphorylases Thioredoxin-like 11
NAD(P)-binding Rossmann-fold domains Serine metabolism enzymes domain 11
Class II aaRS and biotin synthetases GAD domain-like 11
ACP-like Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 11
Histidine-containing phosphotransfer domain, HPT domain Homodimeric domain of signal transducing histidine kinase 11
Ribonuclease PH domain 2-like Ribonuclease PH domain 2-like 11
HD-domain/PDEase-like Nucleotidyltransferase 11
TGS-like ACT-like 11
P-loop containing nucleoside triphosphate hydrolases Cobalamin (vitamin B12)-dependent enzymes 11
HAMP domain-like GAF domain-like 11
HAMP domain-like CheY-like 11
Homocysteine S-methyltransferase Methionine synthase domain 11
FMN-linked oxidoreductases Calcium ATPase, transmembrane domain M 11
Subtilisin-like Galactose-binding domain-like 11
Aldolase AFP III-like domain 11
FAD-binding/transporter-associated domain-like DmpA/ArgJ-like 11
(Trans)glycosidases Beta-D-glucan exohydrolase, C-terminal domain 11
TrmE connector domain P-loop containing nucleoside triphosphate hydrolases 11
RNase III domain-like dsRNA-binding domain-like 11
Pre-protein crosslinking domain of SecA Helical scaffold and wing domains of SecA 11
Ada DNA repair protein, N-terminal domain (N-Ada 10) Methylated DNA-protein cysteine methyltransferase, C-terminal domain 11
alpha/beta-Hydrolases FMN-dependent nitroreductase-like 11
Acyl-CoA N-acyltransferases (Nat) YjgF-like 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) FMN-linked oxidoreductases 11
Nucleotidylyl transferase P-loop containing nucleoside triphosphate hydrolases 11
YbaK/ProRS associated domain Class II aaRS ABD-related 11
Nucleic acid-binding proteins Anticodon-binding domain of PheRS 11
Class II aaRS and biotin synthetases Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) 11
Heme-dependent peroxidases Heme-dependent peroxidases 11
LysM domain Cysteine proteinases 11
Class II aaRS and biotin synthetases Translation proteins 11
Chitinase insertion domain Fibronectin type III 11
NTF2-like Penicillin binding protein dimerisation domain 11
Sigma2 domain of RNA polymerase sigma factors Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 11
"Winged helix" DNA-binding domain Phoshotransferase/anion transport protein 11
Concanavalin A-like lectins/glucanases Alkaline phosphatase-like 11
RBP11-like subunits of RNA polymerase C-terminal domain of RNA polymerase alpha subunit 11
L9 N-domain-like Ribosomal protein L9 C-domain 11
Glutamyl tRNA-reductase catalytic, N-terminal domain Glutamyl tRNA-reductase dimerization domain 11
Homo-oligomeric flavin-containing Cys decarboxylases, HFCD CoaB-like 11
Putative DNA-binding domain Anticodon-binding domain of PheRS 11
Tetrapyrrole methylase Nitrite and sulphite reductase 4Fe-4S domain-like 11
Zinc beta-ribbon DNA primase core 11
CarD-like TRCF domain-like 11
Class I glutamine amidotransferase-like GMP synthetase C-terminal dimerisation domain 11
DnaJ/Hsp40 cysteine-rich domain HSP40/DnaJ peptide-binding domain 11
TGS-like ThrRS/AlaRS common domain 11
Formyltransferase CoA-dependent acyltransferases 11
Nucleic acid-binding proteins Prokaryotic type KH domain (KH-domain type II) 11
PA domain Zn-dependent exopeptidases 11
Nucleotide-diphospho-sugar transferases Nucleotide-diphospho-sugar transferases 11
Probable ACP-binding domain of malonyl-CoA ACP transacylase Probable ACP-binding domain of malonyl-CoA ACP transacylase 11
Probable ACP-binding domain of malonyl-CoA ACP transacylase FMN-linked oxidoreductases 11
DNA ligase/mRNA capping enzyme, catalytic domain BRCT domain 11
Trimeric LpxA-like enzymes Phosphoglucomutase, first 3 domains 11
P-loop containing nucleoside triphosphate hydrolases TRCF domain-like 11
ClpP/crotonase PGBD-like 11
Chemotaxis receptor methyltransferase CheR, N-terminal domain S-adenosyl-L-methionine-dependent methyltransferases 11
Protein kinase-like (PK-like) ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Calcium-dependent phosphotriesterase Nucleotide cyclase 11
GroEL equatorial domain-like GroEL-intermediate domain like 11
Acetyl-CoA synthetase-like Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 11
Galactose-binding domain-like Galactose mutarotase-like 11
PK beta-barrel domain-like Phosphoenolpyruvate/pyruvate domain 11
Fe-S cluster assembly (FSCA) domain-like P-loop containing nucleoside triphosphate hydrolases 11
ValRS/IleRS/LeuRS editing domain tRNA-binding arm 11
NAD(P)-binding Rossmann-fold domains Nucleotide-binding domain 11
DNA repair protein MutS, domain I P-loop containing nucleoside triphosphate hydrolases 11
Translation proteins PRC-barrel domain 11
PK beta-barrel domain-like Phosphohistidine domain 11
beta-lactamase/transpeptidase-like ABC transporter transmembrane region 11
CbiG N-terminal domain-like CobE/GbiG C-terminal domain-like 11
(Trans)glycosidases Chitinase insertion domain 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase DNA mismatch repair protein MutL 11
PIN domain-like P-loop containing nucleoside triphosphate hydrolases 11
Formate/glycerate dehydrogenase catalytic domain-like ACT-like 11
Nucleotide-diphospho-sugar transferases RmlC-like cupins 11
Cadherin-like Invasin/intimin cell-adhesion fragments 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain ACT-like 11
CheY-binding domain of CheA CheW-like 11
"Winged helix" DNA-binding domain "Winged helix" DNA-binding domain 11
PUA domain-like S-adenosyl-L-methionine-dependent methyltransferases 11
Insert subdomain of RNA polymerase alpha subunit C-terminal domain of RNA polymerase alpha subunit 11
alpha-helical ferredoxin Nucleotide-binding domain 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) Translation proteins 11
Ribonuclease PH domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
Homocysteine S-methyltransferase Methionine synthase activation domain-like 11
P-loop containing nucleoside triphosphate hydrolases HRDC-like 11
PUA domain-like Ribosomal protein S5 domain 2-like 11
all-alpha NTP pyrophosphatases all-alpha NTP pyrophosphatases 11
CheY-binding domain of CheA ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Concanavalin A-like lectins/glucanases Invasin/intimin cell-adhesion fragments 11
Formyltransferase FMT C-terminal domain-like 11
Ada DNA repair protein, N-terminal domain (N-Ada 10) Homeodomain-like 11
Galactose-binding domain-like beta-Galactosidase/glucuronidase domain 11
Actin-like ATPase domain Heat shock protein 70kD (HSP70), C-terminal subdomain 11
Trimeric LpxA-like enzymes Phosphoglucomutase, C-terminal domain 11
PK C-terminal domain-like Phosphohistidine domain 11
IlvD/EDD N-terminal domain-like LeuD/IlvD-like 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain II 11
L,D-transpeptidase catalytic domain-like PGBD-like 11
YojJ-like RuvA domain 2-like 11
Respiratory nitrate reductase 1 gamma chain alpha-helical ferredoxin 11
Nucleotidyltransferase Nucleotidyltransferase substrate binding subunit/domain 11
HMA, heavy metal-associated domain HMA, heavy metal-associated domain 11
Succinyl-CoA synthetase domains Succinyl-CoA synthetase domains 11
Subtilisin-like Collagen-binding domain 11
Mechanosensitive channel protein MscS (YggB), transmembrane region Mechanosensitive channel protein MscS (YggB), C-terminal domain 11
Rho N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 11
P-loop containing nucleoside triphosphate hydrolases DNA ligase/mRNA capping enzyme, catalytic domain 11
NusB-like S-adenosyl-L-methionine-dependent methyltransferases 11
Rudiment single hybrid motif Aldolase 11
Molybdenum cofactor biosynthesis proteins MoeA C-terminal domain-like 11
Phosphoenolpyruvate/pyruvate domain PK C-terminal domain-like 11
NAD(P)-binding Rossmann-fold domains Glutamyl tRNA-reductase dimerization domain 11
Sensory domain-like Sensory domain-like 11
Nucleotide-diphospho-sugar transferases Phosphoglucomutase, first 3 domains 11
P-loop containing nucleoside triphosphate hydrolases EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 11
P-loop containing nucleoside triphosphate hydrolases Smc hinge domain 11
NAD(P)-binding Rossmann-fold domains PYP-like sensor domain (PAS domain) 11
Lysozyme-like Duplicated hybrid motif 11
FMN-linked oxidoreductases 4Fe-4S ferredoxins 11
Class II aaRS ABD-related C-terminal domain of ProRS 11
P-loop containing nucleoside triphosphate hydrolases Restriction endonuclease-like 11
Nitrite/Sulfite reductase N-terminal domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 11
Collagen-binding domain alpha/beta-Hydrolases 11
Metalloproteases ("zincins"), catalytic domain Galactose-binding domain-like 11
Molybdenum cofactor biosynthesis proteins CinA-like 11
EAL domain-like CBS-domain pair 11
Subtilisin-like RCC1/BLIP-II 11
RuvA domain 2-like P-loop containing nucleoside triphosphate hydrolases 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) ThrRS/AlaRS common domain 11
PHP domain-like RuvA domain 2-like 11
TPR-like Alkaline phosphatase-like 11
PYP-like sensor domain (PAS domain) CheY-like 11
beta-lactamase/transpeptidase-like beta-lactamase/transpeptidase-like 11
Translation proteins EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 11
CheY-binding domain of CheA Homodimeric domain of signal transducing histidine kinase 11
THUMP domain-like Adenine nucleotide alpha hydrolases-like 11
Cobalamin (vitamin B12)-binding domain Radical SAM enzymes 11
(Trans)glycosidases Hyaluronidase post-catalytic domain-like 11
Cytidine deaminase-like Dihydrofolate reductase-like 11
Methionine synthase domain Cobalamin (vitamin B12)-binding domain 11
P-loop containing nucleoside triphosphate hydrolases Signal peptide-binding domain 11
Ribonuclease H-like DNA/RNA polymerases 11
"Winged helix" DNA-binding domain HRDC-like 11
beta-lactamase/transpeptidase-like Fibronectin type III 11
P-loop containing nucleoside triphosphate hydrolases Prokaryotic type KH domain (KH-domain type II) 11
Starch-binding domain-like Starch-binding domain-like 11
Rubredoxin-like S-adenosyl-L-methionine-dependent methyltransferases 11
Homocysteine S-methyltransferase Cobalamin (vitamin B12)-binding domain 11
DNA-glycosylase Nudix 11
Cobalamin (vitamin B12)-binding domain Methionine synthase activation domain-like 11
Carbamate kinase-like PUA domain-like 11
Ada DNA repair protein, N-terminal domain (N-Ada 10) Methylated DNA-protein cysteine methyltransferase domain 11
PDZ domain-like PGBD-like 11
Eukaryotic type KH-domain (KH-domain type I) Nucleic acid-binding proteins 11
Adenine nucleotide alpha hydrolases-like GMP synthetase C-terminal dimerisation domain 11
Acetyl-CoA synthetase-like alpha/beta-Hydrolases 11
Carboxypeptidase regulatory domain-like Carboxypeptidase regulatory domain-like 11
Putative DNA-binding domain Class II aaRS and biotin synthetases 11
PheT/TilS domain Putative DNA-binding domain 11
KaiA/RbsU domain PP2C-like 11
Acyl-CoA N-acyltransferases (Nat) SCP-like 11
Nucleotidylyl transferase Alpha-L RNA-binding motif 11
Nucleic acid-binding proteins DNA helicase RuvA subunit, C-terminal domain 11
Formate/glycerate dehydrogenase catalytic domain-like Serine metabolism enzymes domain 11
Hsp33 domain HSP33 redox switch-like 11
Glutathione synthetase ATP-binding domain-like Succinyl-CoA synthetase domains 11
ParB/Sulfiredoxin KorB DNA-binding domain-like 11
Eukaryotic type KH-domain (KH-domain type I) HD-domain/PDEase-like 11
Glutamyl tRNA-reductase catalytic, N-terminal domain NAD(P)-binding Rossmann-fold domains 11
Ribonuclease H-like P-loop containing nucleoside triphosphate hydrolases 11
Nucleotidylyl transferase An anticodon-binding domain of class I aminoacyl-tRNA synthetases 11
Formyltransferase Acetyl-CoA synthetase-like 11
DHS-like NAD/FAD-binding domain TPR-like 11
Penicillin-binding protein 2x (pbp-2x), c-terminal domain Penicillin-binding protein 2x (pbp-2x), c-terminal domain 11
YrdC/RibB RibA-like 11
GroEL-intermediate domain like GroEL apical domain-like 11
FabD/lysophospholipase-like FabD/lysophospholipase-like 11
Thioredoxin-like Thioredoxin-like 11
FAD/NAD(P)-binding domain HI0933 insert domain-like 11
Fibronectin type III Fibronectin type III 11
Cryptochrome/photolyase, N-terminal domain Cryptochrome/photolyase FAD-binding domain 11
Terpenoid cyclases/Protein prenyltransferases Terpenoid cyclases/Protein prenyltransferases 11
NTF2-like beta-lactamase/transpeptidase-like 11
ACP-like PLP-dependent transferases 11
Cysteine proteinases Cysteine proteinases 11
"Winged helix" DNA-binding domain Class II aaRS and biotin synthetases 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Alpha subunit of glutamate synthase, C-terminal domain 11
Putative DNA-binding domain S-adenosyl-L-methionine-dependent methyltransferases 11
Thiamin pyrophosphokinase, catalytic domain Thiamin pyrophosphokinase, substrate-binding domain 11
PGBD-like PGBD-like 11
ACP-like beta-lactamase/transpeptidase-like 11
Ribosomal protein S5 domain 2-like HSP90 C-terminal domain 11
Prokaryotic type I DNA topoisomerase Zinc beta-ribbon 11
Nucleotidylyl transferase Riboflavin kinase-like 11
alpha/beta-Hydrolases Galactose-binding domain-like 11
Class II aaRS and biotin synthetases C-terminal domain of transcriptional repressors 11
Elongation factor Ts (EF-Ts), dimerisation domain Elongation factor Ts (EF-Ts), dimerisation domain 11
PheT/TilS domain Anticodon-binding domain of PheRS 11
Lamin A/C globular tail domain DNase I-like 11
Ribonuclease PH domain 2-like Nucleic acid-binding proteins 11
"Winged helix" DNA-binding domain LexA/Signal peptidase 11
PDZ domain-like Ribosomal protein S5 domain 2-like 11
GAF domain-like CheY-like 11
Globin-like Riboflavin synthase domain-like 11
Bacterial adhesins Bacterial adhesins 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) PRTase-like 11
P-loop containing nucleoside triphosphate hydrolases HD-domain/PDEase-like 11
Sm-like ribonucleoproteins Mechanosensitive channel protein MscS (YggB), C-terminal domain 11
GAF domain-like Homeodomain-like 11
2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain Alkaline phosphatase-like 11
Macro domain-like Zn-dependent exopeptidases 11
PreATP-grasp domain post-HMGL domain-like 11
Zinc beta-ribbon Prokaryotic SH3-related domain 11
DNA repair protein MutS, domain II DNA repair protein MutS, domain III 11
Tricorn protease N-terminal domain Tricorn protease N-terminal domain 11
delta-Endotoxin (insectocide), N-terminal domain Galactose-binding domain-like 11
MoeA N-terminal region -like Molybdenum cofactor biosynthesis proteins 11
DeoB insert domain-like Alkaline phosphatase-like 11
PheT/TilS domain Class II aaRS and biotin synthetases 11
Acyl-CoA N-acyltransferases (Nat) Thioredoxin-like 11
"Winged helix" DNA-binding domain DnaD domain-like 11
LysM domain Duplicated hybrid motif 11
Pyruvate-ferredoxin oxidoreductase, PFOR, domain III Thiamin diphosphate-binding fold (THDP-binding) 11
Chitinase insertion domain Carbohydrate binding domain 11
NAD(P)-binding Rossmann-fold domains ClpP/crotonase 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
Ribonuclease H-like RuvA domain 2-like 11
E set domains Carboxypeptidase regulatory domain-like 11
Prokaryotic type KH domain (KH-domain type II) Ribosomal protein S3 C-terminal domain 11
PTS-regulatory domain, PRD Phoshotransferase/anion transport protein 11
Chaperone J-domain DnaJ/Hsp40 cysteine-rich domain 11
PRC-barrel domain PRC-barrel domain 11
Glycoside hydrolase/deacetylase UDP-Glycosyltransferase/glycogen phosphorylase 11
E set domains E set domains 11
Nucleotidyltransferase ACT-like 11
NAD(P)-binding Rossmann-fold domains GAF domain-like 11
HSP40/DnaJ peptide-binding domain HSP40/DnaJ peptide-binding domain 11
Translation proteins Translation proteins 11
Cobalamin (vitamin B12)-binding domain P-loop containing nucleoside triphosphate hydrolases 11
P-loop containing nucleoside triphosphate hydrolases C-terminal UvrC-binding domain of UvrB 11
DnaK suppressor protein DksA, alpha-hairpin domain Glucocorticoid receptor-like (DNA-binding domain) 11
GIY-YIG endonuclease RuvA domain 2-like 11
HAMP domain-like Methyl-accepting chemotaxis protein (MCP) signaling domain 11
Glutathione synthetase ATP-binding domain-like post-HMGL domain-like 11
CBS-domain pair Thioesterase/thiol ester dehydrase-isomerase 11
dsRNA-binding domain-like Ribosomal protein S5 domain 2-like 11
Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain Pyrimidine nucleoside phosphorylase C-terminal domain 11
Peptide methionine sulfoxide reductase Mss4-like 11
Protein kinase-like (PK-like) GAF domain-like 11
NAD(P)-binding Rossmann-fold domains Siroheme synthase middle domains-like 11
Adenine nucleotide alpha hydrolases-like PheT/TilS domain 11
TPR-like SMI1/KNR4-like 11
Nucleotidyltransferase Poly A polymerase C-terminal region-like 11
GreA transcript cleavage protein, N-terminal domain FKBP-like 11
Nucleic acid-binding proteins GAD domain-like 11
Tryptophan synthase beta subunit-like PLP-dependent enzymes ACT-like 11
Class II aaRS and biotin synthetases Anticodon-binding domain of PheRS 11
Sigma2 domain of RNA polymerase sigma factors NTF2-like 11
post-HMGL domain-like Single hybrid motif 11
"Winged helix" DNA-binding domain PRTase-like 11
CoA-dependent acyltransferases Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 11
gp5 N-terminal domain-like Phage fibre proteins 11
Invasin/intimin cell-adhesion fragments RCC1/BLIP-II 11
LysM domain LysM domain 11
6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 11
ACT-like Formyltransferase 11
Putative DNA-binding domain Periplasmic binding protein-like II 11
P-loop containing nucleoside triphosphate hydrolases ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
P-loop containing nucleoside triphosphate hydrolases PTS-regulatory domain, PRD 11
Histidine-containing phosphotransfer domain, HPT domain CheW-like 11
Metalloproteases ("zincins"), catalytic domain Copper amine oxidase, domain N 11
FMN-binding split barrel UbiD C-terminal domain-like 11
FMN-linked oxidoreductases FAD/NAD(P)-binding domain 11
TGS-like Class II aaRS and biotin synthetases 11
PUA domain-like P-loop containing nucleoside triphosphate hydrolases 11
Prokaryotic type KH domain (KH-domain type II) Prokaryotic type KH domain (KH-domain type II) 11
PLP-dependent transferases CoA-dependent acyltransferases 11
YajQ-like YajQ-like 11
Ribosomal protein L6 Ribosomal protein L6 11
Cystatin/monellin Cystatin/monellin 11
Class I glutamine amidotransferase-like Adenine nucleotide alpha hydrolases-like 11
Glutathione synthetase ATP-binding domain-like Single hybrid motif 11
DNA repair protein MutS, domain II P-loop containing nucleoside triphosphate hydrolases 11
Cna protein B-type domain Cna protein B-type domain 11
"Winged helix" DNA-binding domain NAD(P)-binding Rossmann-fold domains 11
Tetrapyrrole methylase all-alpha NTP pyrophosphatases 11
Cytochrome c oxidase subunit II-like, transmembrane region Cytochrome c 11
Nucleotidylyl transferase Ribosomal protein L25-like 11
Nucleotidylyl transferase tRNA-binding arm 11
Tetrapyrrole methylase S-adenosyl-L-methionine-dependent methyltransferases 11
Copper amine oxidase, domain N Duplicated hybrid motif 11
PreATP-grasp domain Single hybrid motif 11
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Nudix 11
DNA ligase/mRNA capping enzyme, catalytic domain RuvA domain 2-like 11
Class II aaRS and biotin synthetases SufE/NifU 11
NAD(P)-binding Rossmann-fold domains alpha/beta-Hydrolases 11
MoaD/ThiS Molybdopterin synthase subunit MoaE 11
Flavoproteins Riboflavin synthase domain-like 11
Obg GTP-binding protein N-terminal domain P-loop containing nucleoside triphosphate hydrolases 11
DNA clamp DNA clamp 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain III 11
ABC transporter involved in vitamin B12 uptake, BtuC ABC transporter involved in vitamin B12 uptake, BtuC 11
PGBD-like PR-1-like 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases Nucleic acid-binding proteins 11
Nitrite/Sulfite reductase N-terminal domain-like Nitrite/Sulfite reductase N-terminal domain-like 11
beta-Galactosidase/glucuronidase domain Galactose mutarotase-like 11
Homocysteine S-methyltransferase FAD-linked oxidoreductase 11
Dihydropteroate synthetase-like Methionine synthase domain 11
Dihydropteroate synthetase-like Cobalamin (vitamin B12)-binding domain 11
S-adenosylmethionine synthetase S-adenosylmethionine synthetase 11
RuBisCO, large subunit, small (N-terminal) domain RuBisCo, C-terminal domain 11
CBS-domain pair ACT-like 11
Ribosomal L11/L12e N-terminal domain Ribosomal protein L11, C-terminal domain 11
Ribosomal protein L7/12, oligomerisation (N-terminal) domain ClpS-like 11
Hypothetical protein SAV1430 ARM repeat 11
CoA-dependent acyltransferases alpha/beta-Hydrolases 11
Ribosomal protein S5 domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
Flavoproteins Ferredoxin reductase-like, C-terminal NADP-linked domain 11
PreATP-grasp domain Aldolase 11
Coiled-coil domain of nucleotide exchange factor GrpE Head domain of nucleotide exchange factor GrpE 11
HisI-like all-alpha NTP pyrophosphatases 11
Ribosomal protein S5 domain 2-like Nucleic acid-binding proteins 11
Families 57/38 glycoside transferase middle domain UDP-Glycosyltransferase/glycogen phosphorylase 11
Aconitase iron-sulfur domain LeuD/IlvD-like 11
Epsilon subunit of F1F0-ATP synthase N-terminal domain Epsilon subunit of F1F0-ATP synthase C-terminal domain 11
Rudiment single hybrid motif post-HMGL domain-like 11
GAF domain-like GAF domain-like 11
beta-Galactosidase/glucuronidase domain beta-Galactosidase/glucuronidase domain 11
Globin-like Ferredoxin reductase-like, C-terminal NADP-linked domain 11
Adenine nucleotide alpha hydrolases-like MesJ substrate recognition domain-like 11
Nitrite and sulphite reductase 4Fe-4S domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 11
HAMP domain-like HD-domain/PDEase-like 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
TGS-like Class II aaRS ABD-related 11
FliG FliG 11
(Trans)glycosidases Galactose mutarotase-like 11
Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 11
vWA-like Class I glutamine amidotransferase-like 11
Cytochrome c Cytochrome c 11
Alpha-L RNA-binding motif S-adenosyl-L-methionine-dependent methyltransferases 11
Periplasmic binding protein-like II ACT-like 11
Sigma3 and sigma4 domains of RNA polymerase sigma factors Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 11
Tex N-terminal region-like RuvA domain 2-like 11
Aldolase Single hybrid motif 11
Rho N-terminal domain-like Nucleic acid-binding proteins 11
Insert subdomain of RNA polymerase alpha subunit RBP11-like subunits of RNA polymerase 11
"Winged helix" DNA-binding domain PTS system IIB component-like 11
PEP carboxykinase N-terminal domain PEP carboxykinase-like 11
UbiD C-terminal domain-like UbiD C-terminal domain-like 11
Domain of the SRP/SRP receptor G-proteins P-loop containing nucleoside triphosphate hydrolases 11
6-phosphogluconate dehydrogenase C-terminal domain-like ACT-like 11
Tricorn protease N-terminal domain DPP6 N-terminal domain-like 11
YhbC-like, N-terminal domain YhbC-like, C-terminal domain 11
Carboxypeptidase regulatory domain-like Starch-binding domain-like 11
Phospholipase D/nuclease Phospholipase D/nuclease 11
Homodimeric domain of signal transducing histidine kinase CheW-like 11
Folate-binding domain Aminomethyltransferase beta-barrel domain 11
Dihydropteroate synthetase-like Methionine synthase activation domain-like 11
Carbohydrate binding domain Carbohydrate binding domain 11
5' to 3' exonuclease, C-terminal subdomain DNA/RNA polymerases 11
DNA repair protein MutS, domain III SMR domain-like 11
Glutathione synthetase ATP-binding domain-like Phosphohistidine domain 11
GAF domain-like PYP-like sensor domain (PAS domain) 11
SH3-domain Zn-dependent exopeptidases 11
Translation proteins Initiation factor IF2/eIF5b, domain 3 11
CheY-like Nucleotide cyclase 11
"Winged helix" DNA-binding domain Iron-dependent repressor protein, dimerization domain 11
Methylglyoxal synthase-like Cytidine deaminase-like 11
Invasin/intimin cell-adhesion fragments Alkaline phosphatase-like 11
HD-domain/PDEase-like ACT-like 11
NAD(P)-binding Rossmann-fold domains P-loop containing nucleoside triphosphate hydrolases 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheW-like 11
LysM domain (Trans)glycosidases 11
NAD(P)-binding Rossmann-fold domains 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
Acetyl-CoA synthetase-like PLP-dependent transferases 11
Metal cation-transporting ATPase, ATP-binding domain N HAD-like 11
E set domains Carbohydrate binding domain 11
Methionine synthase domain Methionine synthase activation domain-like 11
FabD/lysophospholipase-like FMN-linked oxidoreductases 11
Calcium ATPase, transduction domain A Metal cation-transporting ATPase, ATP-binding domain N 11
P-loop containing nucleoside triphosphate hydrolases Hypothetical protein YjiA, C-terminal domain 11
Histidine-containing phosphotransfer domain, HPT domain ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Lysozyme-like Fibronectin type III 11
Ribonuclease H-like TPR-like 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase HSP90 C-terminal domain 11
ACP-like alpha/beta-Hydrolases 11
NagB/RpiA/CoA transferase-like alpha-helical ferredoxin 11
GAF domain-like C-terminal effector domain of the bipartite response regulators 11
P-loop containing nucleoside triphosphate hydrolases TGS-like 11
Metal cation-transporting ATPase, ATP-binding domain N Calcium ATPase, transmembrane domain M 11
Glutathione synthetase ATP-binding domain-like Aldolase 11
HD-domain/PDEase-like TGS-like 11
Transcription factor NusA, N-terminal domain Nucleic acid-binding proteins 11
Periplasmic binding protein-like II Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain 11
HAMP domain-like Nucleotide cyclase 11
SacY-like RNA-binding domain PTS-regulatory domain, PRD 11
PK beta-barrel domain-like PK C-terminal domain-like 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
FMN-linked oxidoreductases Alpha subunit of glutamate synthase, C-terminal domain 11
Heat shock protein 70kD (HSP70), peptide-binding domain Heat shock protein 70kD (HSP70), C-terminal subdomain 11
Formyltransferase ACP-like 11
P-loop containing nucleoside triphosphate hydrolases TrpR-like 11
"Winged helix" DNA-binding domain C-terminal domain of transcriptional repressors 11
P-loop containing nucleoside triphosphate hydrolases RecA protein, C-terminal domain 11
MFS general substrate transporter PYP-like sensor domain (PAS domain) 11
Calcium-dependent phosphotriesterase Sensory domain-like 11
P-loop containing nucleoside triphosphate hydrolases Obg GTP-binding protein C-terminal domain 11
PurM N-terminal domain-like PurM N-terminal domain-like 11
Sigma3 and sigma4 domains of RNA polymerase sigma factors NTF2-like 11
Nucleotidyltransferase PAP/OAS1 substrate-binding domain 11
Enolase C-terminal domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 11
CheY-like Methylesterase CheB, C-terminal domain 11
Glutamine synthetase/guanido kinase GatB/YqeY motif 11
MoeA N-terminal region -like MoeA C-terminal domain-like 11
ClpP/crotonase NfeD domain-like 11
Nucleic acid-binding proteins Putative DNA-binding domain 11
Nucleic acid-binding proteins ArfGap/RecO-like zinc finger 11
Glycoside hydrolase/deacetylase Families 57/38 glycoside transferase middle domain 11
P-loop containing nucleoside triphosphate hydrolases PTS system fructose IIA component-like 11
GroEL equatorial domain-like GroEL apical domain-like 11
Tubulin nucleotide-binding domain-like Tubulin C-terminal domain-like 11
P-loop containing nucleoside triphosphate hydrolases Initiation factor IF2/eIF5b, domain 3 11
UROD/MetE-like UROD/MetE-like 11
P-loop containing nucleoside triphosphate hydrolases Helical scaffold and wing domains of SecA 11
UBA-like Elongation factor Ts (EF-Ts), dimerisation domain 11
Nucleic acid-binding proteins BRCT domain 11
Class II aaRS and biotin synthetases C-terminal domain of ProRS 11
HprK N-terminal domain-like CBS-domain pair 11
Nucleotidylyl transferase Nucleic acid-binding proteins 11
PTS-regulatory domain, PRD PTS system fructose IIA component-like 11
Double Clp-N motif P-loop containing nucleoside triphosphate hydrolases 11
HprK N-terminal domain-like PEP carboxykinase-like 11
Adenine nucleotide alpha hydrolases-like Argininosuccinate synthetase, C-terminal domain 11
6-phosphogluconate dehydrogenase C-terminal domain-like ClpP/crotonase 11
Glycerol-3-phosphate (1)-acyltransferase Acetyl-CoA synthetase-like 11
Trigger factor ribosome-binding domain FKBP-like 11
Histidine-containing phosphotransfer domain, HPT domain CheY-like 11
Nucleotidyltransferase TGS-like 11
"Winged helix" DNA-binding domain PTS system fructose IIA component-like 11
PIN domain-like Ribonuclease H-like 11
Class II aaRS and biotin synthetases YbaK/ProRS associated domain 11
Cupredoxins Cytochrome c 11
PurM C-terminal domain-like PurM C-terminal domain-like 11
Nucleotide-diphospho-sugar transferases Phosphoglucomutase, C-terminal domain 11
Zinc beta-ribbon N-terminal domain of DnaB helicase 11
R1 subunit of ribonucleotide reductase, N-terminal domain PFL-like glycyl radical enzymes 11
5' to 3' exonuclease, C-terminal subdomain Ribonuclease H-like 11
PUA domain-like alpha/beta knot 11
Calcium-dependent phosphotriesterase HAMP domain-like 11
Rudiment single hybrid motif Single hybrid motif 11
DHS-like NAD/FAD-binding domain P-loop containing nucleoside triphosphate hydrolases 11
Tropomyosin Duplicated hybrid motif 11
Transcription factor NusA, N-terminal domain Prokaryotic type KH domain (KH-domain type II) 11
Homocysteine S-methyltransferase Dihydropteroate synthetase-like 11
E set domains Fibronectin type III 11
Tetrapyrrole methylase HemD-like 11
Chaperone J-domain HSP40/DnaJ peptide-binding domain 11
PH0987 N-terminal domain-like Cyclophilin-like 11
4Fe-4S ferredoxins ARM repeat 11
NAD(P)-binding Rossmann-fold domains Succinyl-CoA synthetase domains 11
beta-lactamase/transpeptidase-like P-loop containing nucleoside triphosphate hydrolases 11
GIY-YIG endonuclease C-terminal UvrC-binding domain of UvrB 11
C-terminal UvrC-binding domain of UvrB RuvA domain 2-like 11
DNA primase core N-terminal domain of DnaB helicase 11
S-adenosyl-L-methionine-dependent methyltransferases Putative methyltransferase TM0872, insert domain 11
"Winged helix" DNA-binding domain HprK N-terminal domain-like 11
RuvA domain 2-like RuvA domain 2-like 11
Riboflavin synthase domain-like Riboflavin synthase domain-like 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Nucleotidylyl transferase 11
Nucleotide cyclase DHH phosphoesterases 11
"Winged helix" DNA-binding domain Chorismate lyase-like 11
Trigger factor ribosome-binding domain Triger factor/SurA peptide-binding domain-like 11
2Fe-2S ferredoxin-like alpha-helical ferredoxin 11
DNA methylase specificity domain DNA methylase specificity domain 11
Tex N-terminal region-like Ribonuclease H-like 11
Nucleic acid-binding proteins PheT/TilS domain 11
"Winged helix" DNA-binding domain Ribokinase-like 11
"Winged helix" DNA-binding domain C-terminal domain of arginine repressor 11
Thiolase-like PLP-dependent transferases 11
NagB/RpiA/CoA transferase-like NagB/RpiA/CoA transferase-like 11
Thioredoxin-like FAD/NAD(P)-binding domain 11
P-loop containing nucleoside triphosphate hydrolases SMR domain-like 11
a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Cytochrome c 11
Tex N-terminal region-like Nucleic acid-binding proteins 11
RuvA domain 2-like JAB1/MPN domain 11

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