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Domain combination pairs in Burkholderia glumae BGR1

All pairs of domain combinations at the superfamily level are listed here.
The identification of domain pairs does not account for the possibility of non-contiguous domains. Inserted, or interlaced, domains are seen as having a simple pair ordering.

  • For a list of unique full length architectures for this genome click here (can be slow).
Adjacent domain pairs graph

Graph of adjacent domain pairs.


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Domain combination pairs

799 domain combination pairs.
Click on a column heading to sort that column, or the 'View' button to see domain architetures for that domain pair combination.

Superfamily (N) Superfamily (C) Number of occurrances Number unique
"Winged helix" DNA-binding domain Periplasmic binding protein-like II 901
Homodimeric domain of signal transducing histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 4326
P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases 3614
GroES-like NAD(P)-binding Rossmann-fold domains 285
NAD(P)-binding Rossmann-fold domains 6-phosphogluconate dehydrogenase C-terminal domain-like 266
Homeodomain-like Homeodomain-like 259
CheY-like C-terminal effector domain of the bipartite response regulators 242
Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) 208
Homeodomain-like Tetracyclin repressor-like, C-terminal domain 203
Acyl-CoA dehydrogenase NM domain-like Acyl-CoA dehydrogenase C-terminal domain-like 203
Homeodomain-like Ribonuclease H-like 182
Actin-like ATPase domain Actin-like ATPase domain 176
Sigma2 domain of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 173
"Winged helix" DNA-binding domain Dimeric alpha+beta barrel 161
NAD(P)-binding Rossmann-fold domains Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 164
Phage tail proteins Phage tail proteins 166
Acetyl-CoA synthetase-like ACP-like 1615
ACP-like CoA-dependent acyltransferases 1615
CheY-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 1613
CoA-dependent acyltransferases CoA-dependent acyltransferases 1514
"Winged helix" DNA-binding domain GntR ligand-binding domain-like 151
PYP-like sensor domain (PAS domain) ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 1513
P-loop containing nucleoside triphosphate hydrolases Homeodomain-like 156
CoA-dependent acyltransferases Acetyl-CoA synthetase-like 1514
CheY-like Homodimeric domain of signal transducing histidine kinase 1512
Phage tail proteins gp5 N-terminal domain-like 144
Multidrug resistance efflux transporter EmrE Multidrug resistance efflux transporter EmrE 142
Thioredoxin-like GST C-terminal domain-like 131
PYP-like sensor domain (PAS domain) Homodimeric domain of signal transducing histidine kinase 1312
Riboflavin synthase domain-like Ferredoxin reductase-like, C-terminal NADP-linked domain 125
FAD/NAD(P)-binding domain FAD-linked reductases, C-terminal domain 124
Cytochrome c Cytochrome c 117
"Winged helix" DNA-binding domain GAF domain-like 111
Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain 115
ABC transporter transmembrane region P-loop containing nucleoside triphosphate hydrolases 113
ACP-like Thiolase-like 1010
CheY-like Homeodomain-like 104
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB transmembrane domain 104
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 104
Thiolase-like Thiolase-like 101
"Winged helix" DNA-binding domain PLP-dependent transferases 101
FabD/lysophospholipase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 109
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 104
Metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases 106
ParB/Sulfiredoxin KorB DNA-binding domain-like 102
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB transmembrane domain 104
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 104
CheY-like P-loop containing nucleoside triphosphate hydrolases 93
P-loop containing nucleoside triphosphate hydrolases Translation proteins 95
ISP domain Bet v1-like 92
ACP-like ACP-like 99
Class I glutamine amidotransferase-like Homeodomain-like 91
PYP-like sensor domain (PAS domain) PYP-like sensor domain (PAS domain) 98
P-loop containing nucleoside triphosphate hydrolases MOP-like 91
PreATP-grasp domain Glutathione synthetase ATP-binding domain-like 94
lambda repressor-like DNA-binding domains Periplasmic binding protein-like I 81
(Trans)glycosidases Glycosyl hydrolase domain 87
Thiolase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 88
Aminoacid dehydrogenase-like, N-terminal domain NAD(P)-binding Rossmann-fold domains 82
ACP-like FabD/lysophospholipase-like 88
2Fe-2S ferredoxin-like Riboflavin synthase domain-like 82
Thiamin diphosphate-binding fold (THDP-binding) DHS-like NAD/FAD-binding domain 81
Pheromone-binding domain of LuxR-like quorum-sensing transcription factors C-terminal effector domain of the bipartite response regulators 82
Formate dehydrogenase/DMSO reductase, domains 1-3 ADC-like 84
Acetyl-CoA synthetase-like Acetyl-CoA synthetase-like 88
ACP-like NAD(P)-binding Rossmann-fold domains 88
Thiolase-like FabD/lysophospholipase-like 88
2Fe-2S ferredoxin-like Ferredoxin reductase-like, C-terminal NADP-linked domain 82
ACP-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 88
Thiamin diphosphate-binding fold (THDP-binding) TK C-terminal domain-like 73
Nucleotidylyl transferase Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 75
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Histidine-containing phosphotransfer domain, HPT domain 77
NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains 77
Thiolase-like NAD(P)-binding Rossmann-fold domains 77
Formate/glycerate dehydrogenase catalytic domain-like NAD(P)-binding Rossmann-fold domains 71
FAD/NAD(P)-binding domain FAD/NAD-linked reductases, dimerisation (C-terminal) domain 73
Enolase N-terminal domain-like Enolase C-terminal domain-like 71
lambda repressor-like DNA-binding domains RmlC-like cupins 61
PreATP-grasp domain Rudiment single hybrid motif 62
Glutathione synthetase ATP-binding domain-like Rudiment single hybrid motif 62
MurD-like peptide ligases, catalytic domain MurD-like peptide ligases, peptide-binding domain 63
Homeodomain-like SIS domain 62
GAF domain-like Homodimeric domain of signal transducing histidine kinase 66
Probable ACP-binding domain of malonyl-CoA ACP transacylase NAD(P)-binding Rossmann-fold domains 66
GAF domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 66
Triger factor/SurA peptide-binding domain-like FKBP-like 65
FAD-binding/transporter-associated domain-like FAD-linked oxidases, C-terminal domain 63
FabD/lysophospholipase-like NAD(P)-binding Rossmann-fold domains 66
Double Clp-N motif P-loop containing nucleoside triphosphate hydrolases 52
Lysozyme-like beta-lactamase/transpeptidase-like 53
Alpha-L RNA-binding motif Pseudouridine synthase 53
IlvD/EDD N-terminal domain-like LeuD/IlvD-like 51
HAMP domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 53
TPR-like TPR-like 55
Zn-dependent exopeptidases Bacterial exopeptidase dimerisation domain 51
CheY-like PYP-like sensor domain (PAS domain) 55
gp5 N-terminal domain-like Phage fibre proteins 53
EAL domain-like Nucleotide cyclase 53
Phospholipase D/nuclease Phospholipase D/nuclease 55
P-loop containing nucleoside triphosphate hydrolases Ribosomal protein S5 domain 2-like 54
Homodimeric domain of signal transducing histidine kinase Histidine-containing phosphotransfer domain, HPT domain 55
HlyD-like secretion proteins HlyD-like secretion proteins 53
Adhesin YadA, collagen-binding domain Pili subunits 55
Phage tail proteins Phage fibre proteins 53
Calcium ATPase, transduction domain A Calcium ATPase, transmembrane domain M 44
ValRS/IleRS/LeuRS editing domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 42
"Winged helix" DNA-binding domain NagB/RpiA/CoA transferase-like 41
TPR-like UDP-Glycosyltransferase/glycogen phosphorylase 42
P-loop containing nucleoside triphosphate hydrolases "Winged helix" DNA-binding domain 43
Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like 42
PYP-like sensor domain (PAS domain) GAF domain-like 44
ValRS/IleRS/LeuRS editing domain Nucleotidylyl transferase 42
CheY-like CheY-like 44
CheY-like Histidine-containing phosphotransfer domain, HPT domain 44
Translation proteins EF-G C-terminal domain-like 42
"Winged helix" DNA-binding domain Chorismate lyase-like 41
PurM N-terminal domain-like PurM C-terminal domain-like 42
Regulatory protein AraC Homeodomain-like 43
Calcium ATPase, transduction domain A HAD-like 44
RmlC-like cupins Homeodomain-like 42
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Ribosomal protein S5 domain 2-like 44
E set domains (Trans)glycosidases 44
GAF domain-like CheY-like 44
P-loop containing nucleoside triphosphate hydrolases EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 42
Translation proteins EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 42
EF-G C-terminal domain-like EF-G C-terminal domain-like 42
FAD/NAD(P)-binding domain FAD/NAD(P)-binding domain 44
Aspartate receptor, ligand-binding domain Methyl-accepting chemotaxis protein (MCP) signaling domain 42
Aconitase iron-sulfur domain LeuD/IlvD-like 42
Adhesin YadA, collagen-binding domain Adhesin YadA, collagen-binding domain 44
HAMP domain-like Homodimeric domain of signal transducing histidine kinase 42
Calcium ATPase, transmembrane domain M HAD-like 44
cAMP-binding domain-like "Winged helix" DNA-binding domain 41
P-loop containing nucleoside triphosphate hydrolases EF-G C-terminal domain-like 42
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheW-like 33
CheY-like Methylesterase CheB, C-terminal domain 31
Galactose-binding domain-like Galactose-binding domain-like 32
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 33
CBS-domain pair FAD-binding/transporter-associated domain-like 31
Sm-like ribonucleoproteins Mechanosensitive channel protein MscS (YggB), C-terminal domain 33
Nitrite/Sulfite reductase N-terminal domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 32
Adenine nucleotide alpha hydrolases-like Adenine nucleotide alpha hydrolases-like 31
MurCD N-terminal domain MurD-like peptide ligases, catalytic domain 31
Probable ACP-binding domain of malonyl-CoA ACP transacylase GroES-like 33
MurCD N-terminal domain MurD-like peptide ligases, peptide-binding domain 31
PYP-like sensor domain (PAS domain) Methyl-accepting chemotaxis protein (MCP) signaling domain 31
Phosphohistidine domain Phosphoenolpyruvate/pyruvate domain 33
NAD(P)-binding Rossmann-fold domains ClpP/crotonase 32
Nucleic acid-binding proteins Class II aaRS and biotin synthetases 33
Protease propeptides/inhibitors Subtilisin-like 32
Mechanosensitive channel protein MscS (YggB), transmembrane region Mechanosensitive channel protein MscS (YggB), C-terminal domain 33
Nucleotidyltransferase HD-domain/PDEase-like 32
P-loop containing nucleoside triphosphate hydrolases Class I glutamine amidotransferase-like 31
ACP-like alpha/beta-Hydrolases 33
Nucleotidyltransferase ACT-like 32
Nucleic acid-binding proteins P-loop containing nucleoside triphosphate hydrolases 33
FabD/lysophospholipase-like GroES-like 33
NAD(P)-binding Rossmann-fold domains Succinyl-CoA synthetase domains 33
EF-G C-terminal domain-like Ribosomal protein S5 domain 2-like 32
ACT-like ACT-like 33
Nucleic acid-binding proteins RuvA domain 2-like 33
PDZ domain-like PDZ domain-like 32
Aminoacid dehydrogenase-like, N-terminal domain Isocitrate/Isopropylmalate dehydrogenase-like 31
Trypsin-like serine proteases PDZ domain-like 32
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex CoA-dependent acyltransferases 33
PLP-binding barrel Alanine racemase C-terminal domain-like 32
Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 32
6-phosphogluconate dehydrogenase C-terminal domain-like ClpP/crotonase 32
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 33
Single hybrid motif Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 33
Penicillin binding protein dimerisation domain beta-lactamase/transpeptidase-like 32
EAL domain-like Sensory domain-like 31
Chemotaxis receptor methyltransferase CheR, N-terminal domain S-adenosyl-L-methionine-dependent methyltransferases 31
6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 32
Single hybrid motif CoA-dependent acyltransferases 33
Nucleic acid-binding proteins Nucleic acid-binding proteins 33
PYP-like sensor domain (PAS domain) C-terminal effector domain of the bipartite response regulators 32
Histidine-containing phosphotransfer domain, HPT domain CheW-like 33
Thiolase-like GroES-like 33
Folate-binding domain Aminomethyltransferase beta-barrel domain 33
PYP-like sensor domain (PAS domain) Nucleotide cyclase 32
Origin of replication-binding domain, RBD-like P-loop containing nucleoside triphosphate hydrolases 32
C-terminal effector domain of the bipartite response regulators P-loop containing nucleoside triphosphate hydrolases 32
NAD(P)-binding Rossmann-fold domains Isocitrate/Isopropylmalate dehydrogenase-like 31
"Winged helix" DNA-binding domain "Winged helix" DNA-binding domain 32
Mechanosensitive channel protein MscS (YggB), transmembrane region Sm-like ribonucleoproteins 33
HD-domain/PDEase-like ACT-like 32
Aldolase post-HMGL domain-like 33
GroES-like ACP-like 33
P-loop containing nucleoside triphosphate hydrolases post-AAA+ oligomerization domain-like 32
Class II aaRS and biotin synthetases Class II aaRS ABD-related 33
GAF domain-like Nucleotide cyclase 32
DsbC/DsbG N-terminal domain-like Thioredoxin-like 32
E set domains Glycosyl hydrolase domain 33
ACT-like Formyltransferase 32
DNA ligase/mRNA capping enzyme, catalytic domain Nucleic acid-binding proteins 33
Sensory domain-like Methyl-accepting chemotaxis protein (MCP) signaling domain 32
Methylated DNA-protein cysteine methyltransferase domain Methylated DNA-protein cysteine methyltransferase, C-terminal domain 22
Leukotriene A4 hydrolase N-terminal domain Metalloproteases ("zincins"), catalytic domain 21
GroEL equatorial domain-like GroEL-intermediate domain like 21
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 22
Calcium ATPase, transduction domain A Metal cation-transporting ATPase, ATP-binding domain N 22
GreA transcript cleavage protein, N-terminal domain FKBP-like 21
FAD-linked oxidases, C-terminal domain alpha-helical ferredoxin 21
HD-domain/PDEase-like TGS-like 21
Chorismate mutase II Periplasmic binding protein-like II 21
Clc chloride channel CBS-domain pair 21
Nqo1 middle domain-like Nqo1C-terminal domain-like 22
Homodimeric domain of signal transducing histidine kinase CheW-like 22
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Type II DNA topoisomerase 22
GroEL-intermediate domain like GroEL apical domain-like 21
Cytidine deaminase-like Dihydrofolate reductase-like 21
NAD(P)-binding Rossmann-fold domains UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 22
N-terminal domain of DnaB helicase P-loop containing nucleoside triphosphate hydrolases 21
Rhodanese/Cell cycle control phosphatase Rhodanese/Cell cycle control phosphatase 22
Chorismate mutase II ACT-like 21
TGS-like ACT-like 21
2Fe-2S ferredoxin-like Formate dehydrogenase/DMSO reductase, domains 1-3 22
HMA, heavy metal-associated domain Calcium ATPase, transmembrane domain M 22
HMA, heavy metal-associated domain Calcium ATPase, transduction domain A 22
Thiamin diphosphate-binding fold (THDP-binding) Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 22
N-terminal domain of alpha and beta subunits of F1 ATP synthase P-loop containing nucleoside triphosphate hydrolases 21
PapD-like Periplasmic chaperone C-domain 22
Pentapeptide repeat-like Pentapeptide repeat-like 22
MoeA N-terminal region -like MoeA C-terminal domain-like 21
MetI-like MetI-like 21
Ribosomal protein S5 domain 2-like Ribonuclease PH domain 2-like 22
2Fe-2S ferredoxin-like CO dehydrogenase ISP C-domain like 22
CoA-dependent acyltransferases alpha/beta-Hydrolases 22
(Trans)glycosidases Class I glutamine amidotransferase-like 21
Actin-like ATPase domain Heat shock protein 70kD (HSP70), C-terminal subdomain 22
Glutamine synthetase, N-terminal domain Glutamine synthetase/guanido kinase 21
(Trans)glycosidases Galactose-binding domain-like 22
Nucleotide-diphospho-sugar transferases UDP-Glycosyltransferase/glycogen phosphorylase 22
DPP6 N-terminal domain-like alpha/beta-Hydrolases 21
Metal cation-transporting ATPase, ATP-binding domain N Calcium ATPase, transmembrane domain M 22
P-loop containing nucleoside triphosphate hydrolases Restriction endonuclease-like 22
Succinyl-CoA synthetase domains Succinyl-CoA synthetase domains 22
Nucleotidyltransferase Poly A polymerase C-terminal region-like 22
Aspartate/glutamate racemase Aspartate/glutamate racemase 22
Ribosomal protein S5 domain 2-like Type II DNA topoisomerase 22
FMN-linked oxidoreductases FAD/NAD(P)-binding domain 22
GAF domain-like GAF domain-like 22
Nqo1 FMN-binding domain-like Nqo1 middle domain-like 22
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphoenolpyruvate/pyruvate domain 22
Nqo1 FMN-binding domain-like Nqo1C-terminal domain-like 22
FAD/NAD(P)-binding domain Aminomethyltransferase beta-barrel domain 22
Nucleotidyltransferase TGS-like 21
MoeA N-terminal region -like Molybdenum cofactor biosynthesis proteins 21
Adenine nucleotide alpha hydrolases-like DHS-like NAD/FAD-binding domain 21
2Fe-2S ferredoxin-like alpha-helical ferredoxin 21
PLP-dependent transferases Ornithine decarboxylase C-terminal domain 21
Cytochrome c oxidase subunit II-like, transmembrane region Cupredoxins 22
N-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase 21
P-loop containing nucleoside triphosphate hydrolases C-terminal domain of alpha and beta subunits of F1 ATP synthase 21
PH0987 N-terminal domain-like Cyclophilin-like 21
Acetyl-CoA synthetase-like NAD(P)-binding Rossmann-fold domains 22
Acetyl-CoA synthetase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 22
4Fe-4S ferredoxins Formate dehydrogenase/DMSO reductase, domains 1-3 22
Molybdenum cofactor biosynthesis proteins MoeA C-terminal domain-like 21
Nitrite and sulphite reductase 4Fe-4S domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 21
Terpenoid cyclases/Protein prenyltransferases Terpenoid cyclases/Protein prenyltransferases 22
Nitrite/Sulfite reductase N-terminal domain-like Nitrite/Sulfite reductase N-terminal domain-like 21
lambda repressor-like DNA-binding domains CheY-like 21
Nicotinate/Quinolinate PRTase N-terminal domain-like Nicotinate/Quinolinate PRTase C-terminal domain-like 21
6-phosphogluconate dehydrogenase C-terminal domain-like UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 22
Phosphoglucomutase, first 3 domains Phosphoglucomutase, first 3 domains 21
Translation proteins SH3-like domain Nucleic acid-binding proteins 22
Tryptophan synthase beta subunit-like PLP-dependent enzymes ACT-like 21
Translation proteins ThrRS/AlaRS common domain 22
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 21
EAL domain-like HD-domain/PDEase-like 21
Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 22
Homodimeric domain of signal transducing histidine kinase Homodimeric domain of signal transducing histidine kinase 22
PYP-like sensor domain (PAS domain) Homeodomain-like 22
MurE/MurF N-terminal domain MurD-like peptide ligases, peptide-binding domain 21
Periplasmic binding protein-like II ACT-like 21
PYP-like sensor domain (PAS domain) P-loop containing nucleoside triphosphate hydrolases 22
UROD/MetE-like UROD/MetE-like 21
Nucleotidyltransferase Nucleotidyltransferase substrate binding subunit/domain 22
Translation proteins Ribosomal protein S5 domain 2-like 21
Ribonuclease H-like DNA/RNA polymerases 22
NagB/RpiA/CoA transferase-like NagB/RpiA/CoA transferase-like 22
Nucleotide-diphospho-sugar transferases RmlC-like cupins 21
Acetyl-CoA synthetase-like alpha/beta-Hydrolases 22
L30e-like alpha/beta knot 21
CoA-dependent acyltransferases NAD(P)-binding Rossmann-fold domains 22
CoA-dependent acyltransferases FabD/lysophospholipase-like 22
Aldolase 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 22
FAD/NAD(P)-binding domain Folate-binding domain 22
UDP-Glycosyltransferase/glycogen phosphorylase UDP-Glycosyltransferase/glycogen phosphorylase 22
P-loop containing nucleoside triphosphate hydrolases Hypothetical protein YjiA, C-terminal domain 21
Formyltransferase FMT C-terminal domain-like 21
Actin-like ATPase domain Heat shock protein 70kD (HSP70), peptide-binding domain 22
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphohistidine domain 22
CoA-dependent acyltransferases Probable ACP-binding domain of malonyl-CoA ACP transacylase 22
Class II aaRS and biotin synthetases ThrRS/AlaRS common domain 22
tRNA-binding arm Class II aaRS and biotin synthetases 21
CheW-like CheY-like 22
Cation efflux protein transmembrane domain-like Cation efflux protein cytoplasmic domain-like 22
CorA soluble domain-like Magnesium transport protein CorA, transmembrane region 21
Type II DNA topoisomerase GyrA/ParC C-terminal domain-like 21
Class I glutamine amidotransferase-like Glycosyl hydrolase domain 21
2Fe-2S ferredoxin-like 4Fe-4S ferredoxins 22
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 21
His-Me finger endonucleases DNA-binding domain 21
FAD-binding/transporter-associated domain-like alpha-helical ferredoxin 21
P-loop containing nucleoside triphosphate hydrolases CBS-domain pair 21
GroEL equatorial domain-like GroEL apical domain-like 21
Carbon-nitrogen hydrolase Adenine nucleotide alpha hydrolases-like 22
Glutathione synthetase ATP-binding domain-like Succinyl-CoA synthetase domains 22
CoA-dependent acyltransferases Thiolase-like 22
Lysozyme-like LysM domain 22
HMA, heavy metal-associated domain HAD-like 22
Creatinase/prolidase N-terminal domain Creatinase/aminopeptidase 22
Phosphoglucomutase, first 3 domains Phosphoglucomutase, C-terminal domain 21
MFS general substrate transporter MFS general substrate transporter 21
Acetyl-CoA synthetase-like FabD/lysophospholipase-like 22
PYP-like sensor domain (PAS domain) EAL domain-like 21
Heat shock protein 70kD (HSP70), peptide-binding domain Heat shock protein 70kD (HSP70), C-terminal subdomain 22
Metal cation-transporting ATPase, ATP-binding domain N HAD-like 22
Acetyl-CoA synthetase-like Thiolase-like 22
MurE/MurF N-terminal domain MurD-like peptide ligases, catalytic domain 21
Glutathione synthetase ATP-binding domain-like Carbamoyl phosphate synthetase, large subunit connection domain 11
Rudiment single hybrid motif Single hybrid motif 11
TGS-like ThrRS/AlaRS common domain 11
(Trans)glycosidases Beta-D-glucan exohydrolase, C-terminal domain 11
5' to 3' exonuclease, C-terminal subdomain DNA/RNA polymerases 11
FAD-linked oxidoreductase ALDH-like 11
DinB/YfiT-like putative metalloenzymes C-type lectin-like 11
PRC-barrel domain PRC-barrel domain 11
DNA topoisomerase I domain DNA breaking-rejoining enzymes 11
DnaJ/Hsp40 cysteine-rich domain HSP40/DnaJ peptide-binding domain 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases Nucleic acid-binding proteins 11
"Winged helix" DNA-binding domain LexA/Signal peptidase 11
MOSC N-terminal domain-like PK beta-barrel domain-like 11
P-loop containing nucleoside triphosphate hydrolases Helical scaffold and wing domains of SecA 11
NusB-like S-adenosyl-L-methionine-dependent methyltransferases 11
ADC synthase Class I glutamine amidotransferase-like 11
(Trans)glycosidases Protein kinase-like (PK-like) 11
CbiG N-terminal domain-like Tetrapyrrole methylase 11
Carbamate kinase-like Acyl-CoA N-acyltransferases (Nat) 11
ABC transporter transmembrane region CheY-like 11
Ribosomal protein L6 Ribosomal protein L6 11
PIN domain-like P-loop containing nucleoside triphosphate hydrolases 11
Fe-S cluster assembly (FSCA) domain-like P-loop containing nucleoside triphosphate hydrolases 11
S-adenosyl-L-methionine-dependent methyltransferases UDP-Glycosyltransferase/glycogen phosphorylase 11
RuvA domain 2-like BRCT domain 11
Rho N-terminal domain-like Nucleic acid-binding proteins 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) Translation proteins 11
Ribosomal protein S5 domain 2-like DNA mismatch repair protein MutL 11
EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain "Winged helix" DNA-binding domain 11
C-terminal effector domain of the bipartite response regulators TPR-like 11
Putative DNA-binding domain GAF domain-like 11
Glucose permease domain IIB Glucose permease domain IIB 11
Histidine-containing phosphotransfer domain, HPT domain CheY-binding domain of CheA 11
CBS-domain pair Inosine monophosphate dehydrogenase (IMPDH) 11
Protein kinase-like (PK-like) P-loop containing nucleoside triphosphate hydrolases 11
Glutathione synthetase ATP-binding domain-like Phosphohistidine domain 11
Riboflavin synthase domain-like Riboflavin synthase domain-like 11
Nucleic acid-binding proteins Prokaryotic type KH domain (KH-domain type II) 11
PPK N-terminal domain-like Phospholipase D/nuclease 11
Class I glutamine amidotransferase-like Adenine nucleotide alpha hydrolases-like 11
Trigger factor ribosome-binding domain Triger factor/SurA peptide-binding domain-like 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Adenine nucleotide alpha hydrolases-like 11
Glutamine synthetase/guanido kinase GatB/YqeY motif 11
Carbamoyl phosphate synthetase, large subunit connection domain Methylglyoxal synthase-like 11
HMA, heavy metal-associated domain Metal cation-transporting ATPase, ATP-binding domain N 11
CO dehydrogenase ISP C-domain like CO dehydrogenase flavoprotein C-terminal domain-like 11
RmlC-like cupins RmlC-like cupins 11
R1 subunit of ribonucleotide reductase, N-terminal domain PFL-like glycyl radical enzymes 11
LysM domain Duplicated hybrid motif 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Nucleotidylyl transferase 11
P-loop containing nucleoside triphosphate hydrolases Signal peptide-binding domain 11
P-loop containing nucleoside triphosphate hydrolases Initiation factor IF2/eIF5b, domain 3 11
Cryptochrome/photolyase, N-terminal domain Cryptochrome/photolyase FAD-binding domain 11
ABC transporter involved in vitamin B12 uptake, BtuC ABC transporter involved in vitamin B12 uptake, BtuC 11
DNA repair protein MutS, domain III P-loop containing nucleoside triphosphate hydrolases 11
MesJ substrate recognition domain-like PheT/TilS domain 11
L domain-like Protein kinase-like (PK-like) 11
Transcription factor NusA, N-terminal domain Nucleic acid-binding proteins 11
MalF N-terminal region-like MetI-like 11
Methyl-accepting chemotaxis protein (MCP) signaling domain Methyl-accepting chemotaxis protein (MCP) signaling domain 11
Adenine nucleotide alpha hydrolases-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Duplicated hybrid motif Lysozyme-like 11
Bacterial muramidases Lysozyme-like 11
PrpR receptor domain-like Homeodomain-like 11
Insert subdomain of RNA polymerase alpha subunit RBP11-like subunits of RNA polymerase 11
Purple acid phosphatase, N-terminal domain Metallo-dependent phosphatases 11
NagB/RpiA/CoA transferase-like alpha-helical ferredoxin 11
DNA clamp DNA clamp 11
Class I glutamine amidotransferase-like GMP synthetase C-terminal dimerisation domain 11
FMN-binding split barrel UbiD C-terminal domain-like 11
Translation proteins "Winged helix" DNA-binding domain 11
PPK N-terminal domain-like PHP14-like 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase DNA mismatch repair protein MutL 11
P-loop containing nucleoside triphosphate hydrolases C-terminal UvrC-binding domain of UvrB 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Nucleotidylyl transferase 11
Dihydropteroate synthetase-like Methionine synthase activation domain-like 11
Methionine synthase domain Cobalamin (vitamin B12)-binding domain 11
Methylglyoxal synthase-like Cytidine deaminase-like 11
GAF domain-like P-loop containing nucleoside triphosphate hydrolases 11
Aconitase B, N-terminal domain LeuD/IlvD-like 11
P-loop containing nucleoside triphosphate hydrolases FtsH protease domain-like 11
Ribbon-helix-helix N-terminal domain of bifunctional PutA protein 11
Galactose mutarotase-like (Trans)glycosidases 11
GAF domain-like HD-domain/PDEase-like 11
Prokaryotic type KH domain (KH-domain type II) Ribosomal protein S3 C-terminal domain 11
Putative DNA-binding domain Anticodon-binding domain of PheRS 11
HprK N-terminal domain-like PEP carboxykinase-like 11
HAMP domain-like Histidine-containing phosphotransfer domain, HPT domain 11
Ribonuclease PH domain 2-like Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 11
RNase III domain-like dsRNA-binding domain-like 11
lambda repressor-like DNA-binding domains LexA/Signal peptidase 11
Tubulin nucleotide-binding domain-like Tubulin C-terminal domain-like 11
YhbC-like, N-terminal domain YhbC-like, C-terminal domain 11
S-adenosyl-L-methionine-dependent methyltransferases NAD(P)-binding Rossmann-fold domains 11
PreATP-grasp domain PreATP-grasp domain 11
Probable ACP-binding domain of malonyl-CoA ACP transacylase alpha/beta-Hydrolases 11
Ribonuclease H-like Nucleic acid-binding proteins 11
Adenine nucleotide alpha hydrolases-like Argininosuccinate synthetase, C-terminal domain 11
Flavoproteins Riboflavin synthase domain-like 11
PurS-like PurM N-terminal domain-like 11
Tex N-terminal region-like RuvA domain 2-like 11
ADC-like Ferredoxin reductase-like, C-terminal NADP-linked domain 11
HD-domain/PDEase-like HD-domain/PDEase-like 11
Transcription factor NusA, N-terminal domain Prokaryotic type KH domain (KH-domain type II) 11
FAD-binding/transporter-associated domain-like Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain 11
PIN domain-like 5' to 3' exonuclease, C-terminal subdomain 11
S-adenosyl-L-methionine-dependent methyltransferases ACP-like 11
FliG FliG 11
Nucleic acid-binding proteins BRCT domain 11
Pseudouridine synthase PUA domain-like 11
PK beta-barrel domain-like Phosphoenolpyruvate/pyruvate domain 11
Duplicated hybrid motif Phosphohistidine domain 11
PUA domain-like P-loop containing nucleoside triphosphate hydrolases 11
Resolvase-like Homeodomain-like 11
Concanavalin A-like lectins/glucanases AbfB domain 11
GIY-YIG endonuclease RuvA domain 2-like 11
Nucleotidyltransferase substrate binding subunit/domain Nucleotidyltransferase substrate binding subunit/domain 11
PurS-like FGAM synthase PurL, linker domain 11
Creatinase/prolidase N-terminal domain Creatinase/prolidase N-terminal domain 11
PRC-barrel domain Formin homology 2 domain (FH2 domain) 11
Flavoproteins Ferredoxin reductase-like, C-terminal NADP-linked domain 11
EspE N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 11
RuvA domain 2-like DNA helicase RuvA subunit, C-terminal domain 11
Formate dehydrogenase/DMSO reductase, domains 1-3 Riboflavin synthase domain-like 11
PheT/TilS domain Anticodon-binding domain of PheRS 11
P-loop containing nucleoside triphosphate hydrolases TRCF domain-like 11
FAD/NAD(P)-binding domain alpha/beta-Hydrolases 11
TGS-like Class II aaRS ABD-related 11
CarD-like TRCF domain-like 11
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 Nucleic acid-binding proteins 11
NAD(P)-binding Rossmann-fold domains ACT-like 11
N-terminal domain of bifunctional PutA protein FAD-linked oxidoreductase 11
CO dehydrogenase ISP C-domain like FAD-binding/transporter-associated domain-like 11
CBS-domain pair Nucleotide cyclase 11
Chaperone J-domain HSC20 (HSCB), C-terminal oligomerisation domain 11
GIY-YIG endonuclease C-terminal UvrC-binding domain of UvrB 11
Ribonuclease PH domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
lambda integrase-like, N-terminal domain DNA breaking-rejoining enzymes 11
Peptidase/esterase 'gauge' domain alpha/beta-Hydrolases 11
Duplicated hybrid motif Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain 11
PrpR receptor domain-like PYP-like sensor domain (PAS domain) 11
NAD(P)-binding Rossmann-fold domains LDH C-terminal domain-like 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase PP2C-like 11
Glutathione synthetase ATP-binding domain-like Single hybrid motif 11
ThrRS/AlaRS common domain Class II aaRS ABD-related 11
Prokaryotic type KH domain (KH-domain type II) Rad51 N-terminal domain-like 11
PreATP-grasp domain Single hybrid motif 11
N-utilization substance G protein NusG, N-terminal domain Translation proteins SH3-like domain 11
post-HMGL domain-like 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 11
Dihydropteroate synthetase-like Methionine synthase domain 11
ADC-like Riboflavin synthase domain-like 11
Restriction endonuclease-like S-adenosyl-L-methionine-dependent methyltransferases 11
Ribbon-helix-helix FAD-linked oxidoreductase 11
Glutathione synthetase ATP-binding domain-like Glutathione synthetase ATP-binding domain-like 11
Ribonuclease H-like RuvA domain 2-like 11
Rho N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 11
Globin-like Ferredoxin reductase-like, C-terminal NADP-linked domain 11
ADC synthase D-aminoacid aminotransferase-like PLP-dependent enzymes 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) FMN-linked oxidoreductases 11
Thioredoxin-like Thioredoxin-like 11
Calcium-dependent phosphotriesterase Nitrous oxide reductase, N-terminal domain 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
Nucleic acid-binding proteins ArfGap/RecO-like zinc finger 11
CheC-like Surface presentation of antigens (SPOA) 11
P-loop containing nucleoside triphosphate hydrolases Smc hinge domain 11
P-loop containing nucleoside triphosphate hydrolases TPR-like 11
PYP-like sensor domain (PAS domain) PP2C-like 11
Translation proteins Initiation factor IF2/eIF5b, domain 3 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) ThrRS/AlaRS common domain 11
Phosphoenolpyruvate/pyruvate domain PK C-terminal domain-like 11
FMN-linked oxidoreductases Alpha subunit of glutamate synthase, C-terminal domain 11
Class II aaRS and biotin synthetases Anticodon-binding domain of PheRS 11
Cytochrome c oxidase subunit I-like Cytochrome c oxidase subunit III-like 11
DAK1/DegV-like DhaL-like 11
TGS-like Class II aaRS and biotin synthetases 11
Elongation factor Ts (EF-Ts), dimerisation domain Elongation factor Ts (EF-Ts), dimerisation domain 11
RBP11-like subunits of RNA polymerase C-terminal domain of RNA polymerase alpha subunit 11
FAD-binding/transporter-associated domain-like CO dehydrogenase flavoprotein C-terminal domain-like 11
HPr-like Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain 11
Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases 11
DNA-glycosylase Nudix 11
FMN-linked oxidoreductases Nucleotide-binding domain 11
PurM C-terminal domain-like PurM C-terminal domain-like 11
Obg GTP-binding protein N-terminal domain P-loop containing nucleoside triphosphate hydrolases 11
YbaK/ProRS associated domain Class II aaRS ABD-related 11
2Fe-2S ferredoxin-like FAD-binding/transporter-associated domain-like 11
Adenine nucleotide alpha hydrolases-like MesJ substrate recognition domain-like 11
PUA domain-like Ribosomal protein S5 domain 2-like 11
DNA ligase/mRNA capping enzyme, catalytic domain RuvA domain 2-like 11
Dihydropteroate synthetase-like Cobalamin (vitamin B12)-binding domain 11
Actin-like ATPase domain HD-domain/PDEase-like 11
HemD-like HemD-like 11
Periplasmic binding protein-like II Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain 11
Actin-like ATPase domain Homeodomain-like 11
Eukaryotic type KH-domain (KH-domain type I) Nucleic acid-binding proteins 11
Adenine nucleotide alpha hydrolases-like GMP synthetase C-terminal dimerisation domain 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Nucleic acid-binding proteins 11
Transmembrane di-heme cytochromes Calcium ATPase, transmembrane domain M 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain III 11
C-terminal UvrC-binding domain of UvrB RuvA domain 2-like 11
Chaperone J-domain DnaJ/Hsp40 cysteine-rich domain 11
Ribonuclease PH domain 2-like Ribonuclease PH domain 2-like 11
NHL repeat 3-carboxy-cis,cis-mucoante lactonizing enzyme 11
Nucleotidylyl transferase Ribosomal protein L25-like 11
ABC transporter involved in vitamin B12 uptake, BtuC P-loop containing nucleoside triphosphate hydrolases 11
Cobalamin (vitamin B12)-binding domain Methionine synthase activation domain-like 11
FGAM synthase PurL, linker domain PurM C-terminal domain-like 11
Sensory domain-like Homodimeric domain of signal transducing histidine kinase 11
Formate dehydrogenase/DMSO reductase, domains 1-3 Ferredoxin reductase-like, C-terminal NADP-linked domain 11
NagB/RpiA/CoA transferase-like 4Fe-4S ferredoxins 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain II 11
Ribosomal protein S5 domain 2-like Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 11
FGAM synthase PurL, linker domain Class I glutamine amidotransferase-like 11
HPr-like Phosphohistidine domain 11
Single hybrid motif Single hybrid motif 11
Ribosomal protein S5 domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
Nucleic acid-binding proteins DNA helicase RuvA subunit, C-terminal domain 11
Glutamyl tRNA-reductase catalytic, N-terminal domain NAD(P)-binding Rossmann-fold domains 11
Adenine nucleotide alpha hydrolases-like GAF domain-like 11
DnaK suppressor protein DksA, alpha-hairpin domain Glucocorticoid receptor-like (DNA-binding domain) 11
Phage fibre proteins alpha/beta-Hydrolases 11
P-loop containing nucleoside triphosphate hydrolases TGS-like 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase HSP90 C-terminal domain 11
FAD/NAD(P)-binding domain HI0933 insert domain-like 11
Fe,Mn superoxide dismutase (SOD), N-terminal domain Fe,Mn superoxide dismutase (SOD), C-terminal domain 11
FMN-dependent nitroreductase-like FMN-dependent nitroreductase-like 11
Thiolase-like alpha/beta-Hydrolases 11
MetI-like P-loop containing nucleoside triphosphate hydrolases 11
Translation proteins Translation proteins 11
P-loop containing nucleoside triphosphate hydrolases Zinc beta-ribbon 11
Heme-dependent catalase-like Class I glutamine amidotransferase-like 11
PK beta-barrel domain-like PK C-terminal domain-like 11
PreATP-grasp domain Methylglyoxal synthase-like 11
Nucleotide-binding domain Nucleotide-binding domain 11
ADC-like Flavoproteins 11
Fumarylacetoacetate hydrolase, FAH, N-terminal domain FAH 11
5' to 3' exonuclease, C-terminal subdomain Ribonuclease H-like 11
Putative DNA-binding domain Initiation factor IF2/eIF5b, domain 3 11
Probable ACP-binding domain of malonyl-CoA ACP transacylase S-adenosyl-L-methionine-dependent methyltransferases 11
Galactose-binding domain-like Ricin B-like lectins 11
P-loop containing nucleoside triphosphate hydrolases ACT-like 11
Glutathione synthetase ATP-binding domain-like Methylglyoxal synthase-like 11
Cupredoxins Cytochrome c 11
DNA repair protein MutS, domain II DNA repair protein MutS, domain III 11
N-terminal domain of MutM-like DNA repair proteins Glucocorticoid receptor-like (DNA-binding domain) 11
FAD/NAD(P)-binding domain Nitrite/Sulfite reductase N-terminal domain-like 11
Single hybrid motif FAD/NAD(P)-binding domain 11
Actin-like ATPase domain SIS domain 11
Homo-oligomeric flavin-containing Cys decarboxylases, HFCD CoaB-like 11
P-loop containing nucleoside triphosphate hydrolases CarD-like 11
Phage tail proteins alpha/beta-Hydrolases 11
GroES-like alpha/beta-Hydrolases 11
Carbamoyl phosphate synthetase, small subunit N-terminal domain Class I glutamine amidotransferase-like 11
Cytochrome c oxidase subunit II-like, transmembrane region OmpA-like 11
PurM N-terminal domain-like Class I glutamine amidotransferase-like 11
NagB/RpiA/CoA transferase-like D-ribose-5-phosphate isomerase (RpiA), lid domain 11
WD40 repeat-like WD40 repeat-like 11
Epsilon subunit of F1F0-ATP synthase N-terminal domain Epsilon subunit of F1F0-ATP synthase C-terminal domain 11
Class II aaRS and biotin synthetases YbaK/ProRS associated domain 11
Nucleotidyltransferase substrate binding subunit/domain ACT-like 11
S-adenosylmethionine synthetase S-adenosylmethionine synthetase 11
Homeodomain-like Methylated DNA-protein cysteine methyltransferase, C-terminal domain 11
"Winged helix" DNA-binding domain Actin-like ATPase domain 11
PUA domain-like S-adenosyl-L-methionine-dependent methyltransferases 11
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 Eukaryotic type KH-domain (KH-domain type I) 11
Ribosomal protein L7/12, oligomerisation (N-terminal) domain ClpS-like 11
L9 N-domain-like Ribosomal protein L9 C-domain 11
Thiol:disulfide interchange protein DsbD, N-terminal domain (DsbD-alpha) Thioredoxin-like 11
Ada DNA repair protein, N-terminal domain (N-Ada 10) Homeodomain-like 11
Nucleic acid-binding proteins Rad51 N-terminal domain-like 11
FAD-linked reductases, C-terminal domain Folate-binding domain 11
Transmembrane di-heme cytochromes Calcium ATPase, transduction domain A 11
UBA-like Elongation factor Ts (EF-Ts), dimerisation domain 11
DNA repair protein MutS, domain II P-loop containing nucleoside triphosphate hydrolases 11
Globin-like Riboflavin synthase domain-like 11
Nucleic acid-binding proteins PheT/TilS domain 11
Ribonuclease H-like mu transposase, C-terminal domain 11
ValRS/IleRS/LeuRS editing domain tRNA-binding arm 11
S-adenosyl-L-methionine-dependent methyltransferases TPR-like 11
Tex N-terminal region-like Nucleic acid-binding proteins 11
HMA, heavy metal-associated domain HMA, heavy metal-associated domain 11
Transmembrane di-heme cytochromes Metal cation-transporting ATPase, ATP-binding domain N 11
Phase 1 flagellin Phase 1 flagellin 11
Cupredoxins OmpA-like 11
NAD(P)-binding Rossmann-fold domains alpha/beta-Hydrolases 11
Class I glutamine amidotransferase-like LD-carboxypeptidase A C-terminal domain-like 11
Ribosomal L11/L12e N-terminal domain Ribosomal protein L11, C-terminal domain 11
P-loop containing nucleoside triphosphate hydrolases S-adenosyl-L-methionine-dependent methyltransferases 11
Nucleotidyltransferase Nucleotidyltransferase 11
(Trans)glycosidases (Trans)glycosidases 11
Ribonuclease PH domain 2-like Nucleic acid-binding proteins 11
Ribosomal protein S5 domain 2-like HSP90 C-terminal domain 11
Methionine synthase domain Methionine synthase activation domain-like 11
gp5 N-terminal domain-like alpha/beta-Hydrolases 11
Aconitase B, N-terminal domain Aconitase iron-sulfur domain 11
YgfB-like Sec-C motif 11
P-loop containing nucleoside triphosphate hydrolases TrpR-like 11
Acid phosphatase/Vanadium-dependent haloperoxidase Pectin lyase-like 11
YrdC/RibB RibA-like 11
TATA-box binding protein-like DNA-glycosylase 11
C-terminal effector domain of the bipartite response regulators C-terminal effector domain of the bipartite response regulators 11
Insert subdomain of RNA polymerase alpha subunit C-terminal domain of RNA polymerase alpha subunit 11
PUA domain-like alpha/beta knot 11
Nucleic acid-binding proteins GAD domain-like 11
PYP-like sensor domain (PAS domain) Histidine-containing phosphotransfer domain, HPT domain 11
Molybdenum cofactor-binding domain Molybdenum cofactor-binding domain 11
Nucleotidylyl transferase Nucleic acid-binding proteins 11
Transmembrane di-heme cytochromes HAD-like 11
Duplicated hybrid motif Phosphoenolpyruvate/pyruvate domain 11
Nucleotidylyl transferase An anticodon-binding domain of class I aminoacyl-tRNA synthetases 11
Phosphoenolpyruvate/pyruvate domain Nucleotide-diphospho-sugar transferases 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) PRTase-like 11
Hsp33 domain HSP33 redox switch-like 11
dsRNA-binding domain-like Ribosomal protein S5 domain 2-like 11
PIN domain-like DNA/RNA polymerases 11
LysM domain LysM domain 11
alpha/beta-Hydrolases NTF2-like 11
ClpP/crotonase ClpP/crotonase 11
Tricorn protease N-terminal domain DPP6 N-terminal domain-like 11
GAF domain-like Homeodomain-like 11
Galactose mutarotase-like Glycosyl hydrolase domain 11
P-loop containing nucleoside triphosphate hydrolases HRDC-like 11
ATP-dependent DNA ligase DNA-binding domain DNA ligase/mRNA capping enzyme, catalytic domain 11
PurS-like Class I glutamine amidotransferase-like 11
Domain of the SRP/SRP receptor G-proteins P-loop containing nucleoside triphosphate hydrolases 11
MOP-like MOP-like 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
Nucleotidylyl transferase Alpha-L RNA-binding motif 11
Duplicated hybrid motif HPr-like 11
P-loop containing nucleoside triphosphate hydrolases RecA protein, C-terminal domain 11
PurM N-terminal domain-like PurM N-terminal domain-like 11
Putative DNA-binding domain Class II aaRS and biotin synthetases 11
S-adenosyl-L-methionine-dependent methyltransferases GroES-like 11
alpha-helical ferredoxin Nucleotide-binding domain 11
4Fe-4S ferredoxins ADC-like 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) SIS domain 11
CO dehydrogenase molybdoprotein N-domain-like Molybdenum cofactor-binding domain 11
Carbamate kinase-like PUA domain-like 11
Nucleotidyltransferase substrate binding subunit/domain HD-domain/PDEase-like 11
ATP-dependent DNA ligase DNA-binding domain Nucleic acid-binding proteins 11
FabD/lysophospholipase-like S-adenosyl-L-methionine-dependent methyltransferases 11
HSP40/DnaJ peptide-binding domain HSP40/DnaJ peptide-binding domain 11
Pili subunits GspK insert domain-like 11
HAMP domain-like PYP-like sensor domain (PAS domain) 11
E set domains E set domains 11
Glycosyl hydrolase domain Protein kinase-like (PK-like) 11
Glutamyl tRNA-reductase catalytic, N-terminal domain Glutamyl tRNA-reductase dimerization domain 11
PIN domain-like Ribonuclease H-like 11
Glycosyl hydrolase domain Galactose-binding domain-like 11
P-loop containing nucleoside triphosphate hydrolases Pre-protein crosslinking domain of SecA 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Alpha subunit of glutamate synthase, C-terminal domain 11
NAD(P)-binding Rossmann-fold domains Acyl-CoA N-acyltransferases (Nat) 11
PEP carboxykinase N-terminal domain PEP carboxykinase-like 11
lambda repressor-like DNA-binding domains Cyanase C-terminal domain 11
TTHA1013/TTHA0281-like Ribbon-helix-helix 11
MFS general substrate transporter Glycerol-3-phosphate (1)-acyltransferase 11
Cytochrome c oxidase subunit II-like, transmembrane region Cytochrome c 11
Nucleotide-diphospho-sugar transferases PilZ domain-like 11
PrpR receptor domain-like P-loop containing nucleoside triphosphate hydrolases 11
Succinyl-CoA synthetase domains Acyl-CoA N-acyltransferases (Nat) 11
Nucleotidylyl transferase tRNA-binding arm 11
DNA/RNA polymerases Lesion bypass DNA polymerase (Y-family), little finger domain 11
Ribbon-helix-helix ALDH-like 11
PreATP-grasp domain Carbamoyl phosphate synthetase, large subunit connection domain 11
CheY-like Nucleotide cyclase 11
Putative DNA-binding domain Translation proteins 11
PheT/TilS domain Putative DNA-binding domain 11
YajQ-like YajQ-like 11
2Fe-2S ferredoxin-like CO dehydrogenase flavoprotein C-terminal domain-like 11
Cupredoxins Cupredoxins 11
Glucocorticoid receptor-like (DNA-binding domain) P-loop containing nucleoside triphosphate hydrolases 11
Tetrapyrrole methylase S-adenosyl-L-methionine-dependent methyltransferases 11
HPr-like Phosphoenolpyruvate/pyruvate domain 11
S-adenosyl-L-methionine-dependent methyltransferases S-adenosyl-L-methionine-dependent methyltransferases 11
Thiolase-like S-adenosyl-L-methionine-dependent methyltransferases 11
Tex N-terminal region-like Ribonuclease H-like 11
DNA ligase/mRNA capping enzyme, catalytic domain BRCT domain 11
PHP14-like Phospholipase D/nuclease 11
Cobalamin (vitamin B12)-dependent enzymes Cobalamin (vitamin B12)-binding domain 11
Nucleic acid-binding proteins Anticodon-binding domain of PheRS 11
FAD-linked reductases, C-terminal domain Aminomethyltransferase beta-barrel domain 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
Rad51 N-terminal domain-like Rad51 N-terminal domain-like 11
Glutathione synthetase ATP-binding domain-like Phosphoenolpyruvate/pyruvate domain 11
Class II aaRS and biotin synthetases Translation proteins 11
Transcription factor NusA, N-terminal domain Rad51 N-terminal domain-like 11
Macro domain-like Zn-dependent exopeptidases 11
Nucleotide-binding domain FAD/NAD(P)-binding domain 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases tRNA-binding arm 11
Putative DNA-binding domain P-loop containing nucleoside triphosphate hydrolases 11
Pre-protein crosslinking domain of SecA Helical scaffold and wing domains of SecA 11
Nucleotide-binding domain FAD-linked reductases, C-terminal domain 11
YjeF N-terminal domain-like Ribokinase-like 11
NAD(P)-binding Rossmann-fold domains 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain ACT-like 11
Adenine nucleotide alpha hydrolases-like Homodimeric domain of signal transducing histidine kinase 11
Zinc beta-ribbon DNA primase core 11
Trigger factor ribosome-binding domain FKBP-like 11
P-loop containing nucleoside triphosphate hydrolases Bacterial luciferase-like 11
TrkA C-terminal domain-like TrkA C-terminal domain-like 11
GroES-like GroES-like 11
2Fe-2S ferredoxin-like ADC-like 11
Thioredoxin-like TPR-like 11
PDZ domain-like ClpP/crotonase 11
4'-phosphopantetheinyl transferase 4'-phosphopantetheinyl transferase 11
Xylose isomerase-like Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 11
Translation initiation factor IF3, N-terminal domain Translation initiation factor IF3, C-terminal domain 11
CoA-transferase family III (CaiB/BaiF) CoA-transferase family III (CaiB/BaiF) 11
S-adenosyl-L-methionine-dependent methyltransferases Nucleotide-diphospho-sugar transferases 11
Urease metallochaperone UreE, N-terminal domain Urease metallochaperone UreE, C-terminal domain 11
Nucleotidylyl transferase Riboflavin kinase-like 11
PurS-like PurM C-terminal domain-like 11
Class II aaRS and biotin synthetases C-terminal domain of transcriptional repressors 11
FAD/NAD(P)-binding domain 4Fe-4S ferredoxins 11
NAD(P)-binding Rossmann-fold domains Glutamyl tRNA-reductase dimerization domain 11
Single hybrid motif FAD/NAD-linked reductases, dimerisation (C-terminal) domain 11
Adenine nucleotide alpha hydrolases-like PheT/TilS domain 11
CheY-binding domain of CheA CheW-like 11
FAD-linked reductases, C-terminal domain 4Fe-4S ferredoxins 11
Nucleotide-diphospho-sugar transferases Nucleotide-diphospho-sugar transferases 11
CheY-binding domain of CheA ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Thioredoxin-like Acyl-CoA N-acyltransferases (Nat) 11
PurM C-terminal domain-like Class I glutamine amidotransferase-like 11
DNA repair protein MutS, domain I P-loop containing nucleoside triphosphate hydrolases 11
EAL domain-like CBS-domain pair 11
Ada DNA repair protein, N-terminal domain (N-Ada 10) Methylated DNA-protein cysteine methyltransferase domain 11
N-terminal domain of MutM-like DNA repair proteins S13-like H2TH domain 11
PheT/TilS domain Class II aaRS and biotin synthetases 11
NAD(P)-binding Rossmann-fold domains TrkA C-terminal domain-like 11
Coiled-coil domain of nucleotide exchange factor GrpE Head domain of nucleotide exchange factor GrpE 11
S-adenosyl-L-methionine-dependent methyltransferases Putative methyltransferase TM0872, insert domain 11
Translation proteins PRC-barrel domain 11
N-terminal domain of bifunctional PutA protein ALDH-like 11
Thioredoxin-like FAD/NAD(P)-binding domain 11
CBS-domain pair PP2C-like 11
Galactose-binding domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Sensory domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Class II aaRS and biotin synthetases GAD domain-like 11
(Trans)glycosidases Ricin B-like lectins 11
Nucleotide-diphospho-sugar transferases Trimeric LpxA-like enzymes 11
CheY-binding domain of CheA Homodimeric domain of signal transducing histidine kinase 11
Periplasmic binding protein-like I Homeodomain-like 11
NAD(P)-binding Rossmann-fold domains Glutathione synthetase ATP-binding domain-like 11
Ribonuclease H-like GIY-YIG endonuclease 11
P-loop containing nucleoside triphosphate hydrolases Prokaryotic type KH domain (KH-domain type II) 11
Ribosomal protein S5 domain 2-like Nucleic acid-binding proteins 11
Zinc beta-ribbon Prokaryotic SH3-related domain 11
S13-like H2TH domain Glucocorticoid receptor-like (DNA-binding domain) 11
TolB, N-terminal domain Tricorn protease N-terminal domain 11
Class II aaRS and biotin synthetases Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) 11
N-acetylmuramoyl-L-alanine amidase-like PGBD-like 11
Cytochrome c OmpA-like 11
Carbamate kinase-like ACT-like 11
FGAM synthase PurL, linker domain PurM N-terminal domain-like 11
Transmembrane di-heme cytochromes a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 11
FabD/lysophospholipase-like alpha/beta-Hydrolases 11
YgbK-like Isocitrate/Isopropylmalate dehydrogenase-like 11
GAF domain-like C-terminal effector domain of the bipartite response regulators 11
Formate dehydrogenase/DMSO reductase, domains 1-3 Flavoproteins 11
Metalloproteases ("zincins"), catalytic domain PDZ domain-like 11
Nucleic acid-binding proteins S-adenosyl-L-methionine-dependent methyltransferases 11
Chaperone J-domain HSP40/DnaJ peptide-binding domain 11
Metallo-hydrolase/oxidoreductase Acyl-CoA N-acyltransferases (Nat) 11
PLP-dependent transferases PLP-dependent transferases 11
FAD/NAD(P)-binding domain Nitrite and sulphite reductase 4Fe-4S domain-like 11
Homeodomain-like Methylated DNA-protein cysteine methyltransferase domain 11
Ribosomal protein S5 domain 2-like GHMP Kinase, C-terminal domain 11
alpha/beta-Hydrolases alpha/beta-Hydrolases 11
Heme-dependent peroxidases Heme-dependent peroxidases 11
Prokaryotic type KH domain (KH-domain type II) Prokaryotic type KH domain (KH-domain type II) 11
CheW-like CheW-like 11
Diaminopimelate epimerase-like Diaminopimelate epimerase-like 11
RuvA domain 2-like RuvA domain 2-like 11
Nucleic acid-binding proteins Putative DNA-binding domain 11
Ada DNA repair protein, N-terminal domain (N-Ada 10) Methylated DNA-protein cysteine methyltransferase, C-terminal domain 11
FKBP-like FKBP-like 11

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