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Domain combination pairs in Ralstonia pickettii 12D

All pairs of domain combinations at the superfamily level are listed here.
The identification of domain pairs does not account for the possibility of non-contiguous domains. Inserted, or interlaced, domains are seen as having a simple pair ordering.

  • For a list of unique full length architectures for this genome click here (can be slow).
Adjacent domain pairs graph

Graph of adjacent domain pairs.


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Domain combination pairs

717 domain combination pairs.
Click on a column heading to sort that column, or the 'View' button to see domain architetures for that domain pair combination.

Superfamily (N) Superfamily (C) Number of occurrances Number unique
"Winged helix" DNA-binding domain Periplasmic binding protein-like II 881
Homodimeric domain of signal transducing histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 3820
P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases 3313
CheY-like C-terminal effector domain of the bipartite response regulators 282
NAD(P)-binding Rossmann-fold domains 6-phosphogluconate dehydrogenase C-terminal domain-like 215
Homeodomain-like Tetracyclin repressor-like, C-terminal domain 203
Multidrug resistance efflux transporter EmrE Multidrug resistance efflux transporter EmrE 202
Acyl-CoA dehydrogenase NM domain-like Acyl-CoA dehydrogenase C-terminal domain-like 203
Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain 196
FAD/NAD(P)-binding domain FAD-linked reductases, C-terminal domain 195
Homeodomain-like Homeodomain-like 179
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB transmembrane domain 165
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB transmembrane domain 165
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 165
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 165
PYP-like sensor domain (PAS domain) ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 1512
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 154
Actin-like ATPase domain Actin-like ATPase domain 144
Nucleotide cyclase EAL domain-like 146
"Winged helix" DNA-binding domain GAF domain-like 131
Thioredoxin-like GST C-terminal domain-like 132
NAD(P)-binding Rossmann-fold domains Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 134
Calcium ATPase, transduction domain A Calcium ATPase, transmembrane domain M 138
Thiolase-like Thiolase-like 131
P-loop containing nucleoside triphosphate hydrolases Homeodomain-like 139
HAD-like Calcium ATPase, transmembrane domain M 138
Calcium ATPase, transduction domain A HAD-like 138
Sigma2 domain of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 124
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheY-like 1211
PYP-like sensor domain (PAS domain) Nucleotide cyclase 127
PYP-like sensor domain (PAS domain) Homodimeric domain of signal transducing histidine kinase 1210
Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) 115
PYP-like sensor domain (PAS domain) PYP-like sensor domain (PAS domain) 119
Riboflavin synthase domain-like Ferredoxin reductase-like, C-terminal NADP-linked domain 115
Cytochrome c Cytochrome c 115
Zn-dependent exopeptidases Bacterial exopeptidase dimerisation domain 112
"Winged helix" DNA-binding domain GntR ligand-binding domain-like 102
Homodimeric domain of signal transducing histidine kinase CheY-like 109
GroES-like NAD(P)-binding Rossmann-fold domains 102
Formate dehydrogenase/DMSO reductase, domains 1-3 ADC-like 94
cAMP-binding domain-like "Winged helix" DNA-binding domain 92
PreATP-grasp domain Glutathione synthetase ATP-binding domain-like 95
Riboflavin synthase domain-like 2Fe-2S ferredoxin-like 82
MurD-like peptide ligases, catalytic domain MurD-like peptide ligases, peptide-binding domain 85
P-loop containing nucleoside triphosphate hydrolases Translation proteins 85
Formate/glycerate dehydrogenase catalytic domain-like NAD(P)-binding Rossmann-fold domains 81
Composite domain of metallo-dependent hydrolases Metallo-dependent hydrolases 85
Ferredoxin reductase-like, C-terminal NADP-linked domain 2Fe-2S ferredoxin-like 82
ParB/Sulfiredoxin KorB DNA-binding domain-like 82
"Winged helix" DNA-binding domain Dimeric alpha+beta barrel 81
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Histidine-containing phosphotransfer domain, HPT domain 76
P-loop containing nucleoside triphosphate hydrolases MOP-like 71
P-loop containing nucleoside triphosphate hydrolases CheY-like 74
Aminoacid dehydrogenase-like, N-terminal domain NAD(P)-binding Rossmann-fold domains 73
PYP-like sensor domain (PAS domain) EAL domain-like 73
2Fe-2S ferredoxin-like CO dehydrogenase ISP C-domain like 63
lambda repressor-like DNA-binding domains Periplasmic binding protein-like I 61
Phospholipase D/nuclease Phospholipase D/nuclease 64
HMA, heavy metal-associated domain HAD-like 65
HAMP domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 64
HMA, heavy metal-associated domain Calcium ATPase, transduction domain A 65
Glutathione synthetase ATP-binding domain-like Rudiment single hybrid motif 63
HMA, heavy metal-associated domain Calcium ATPase, transmembrane domain M 65
"Winged helix" DNA-binding domain Chorismate lyase-like 62
CheY-like Homeodomain-like 63
ABC transporter transmembrane region P-loop containing nucleoside triphosphate hydrolases 63
PreATP-grasp domain Rudiment single hybrid motif 63
"Winged helix" DNA-binding domain PLP-dependent transferases 62
Nucleotidylyl transferase Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 65
Thiamin diphosphate-binding fold (THDP-binding) DHS-like NAD/FAD-binding domain 61
Homodimeric domain of signal transducing histidine kinase Histidine-containing phosphotransfer domain, HPT domain 54
FAD-binding/transporter-associated domain-like FAD-linked oxidases, C-terminal domain 53
Nicotinate/Quinolinate PRTase N-terminal domain-like Nicotinate/Quinolinate PRTase C-terminal domain-like 51
Homeodomain-like SIS domain 51
FAD/NAD(P)-binding domain FAD/NAD-linked reductases, dimerisation (C-terminal) domain 54
CheY-like PYP-like sensor domain (PAS domain) 55
Triger factor/SurA peptide-binding domain-like FKBP-like 54
P-loop containing nucleoside triphosphate hydrolases Ribosomal protein S5 domain 2-like 53
Aspartate receptor, ligand-binding domain Methyl-accepting chemotaxis protein (MCP) signaling domain 52
lambda integrase-like, N-terminal domain DNA breaking-rejoining enzymes 51
Class I glutamine amidotransferase-like Homeodomain-like 52
CheY-like Histidine-containing phosphotransfer domain, HPT domain 54
ISP domain Bet v1-like 52
Alpha-L RNA-binding motif Pseudouridine synthase 53
P-loop containing nucleoside triphosphate hydrolases EF-G C-terminal domain-like 54
IlvD/EDD N-terminal domain-like LeuD/IlvD-like 51
Enolase N-terminal domain-like Enolase C-terminal domain-like 51
GAF domain-like Nucleotide cyclase 42
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Ribosomal protein S5 domain 2-like 44
HAMP domain-like Homodimeric domain of signal transducing histidine kinase 42
Trypsin-like serine proteases PDZ domain-like 43
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 42
CO dehydrogenase molybdoprotein N-domain-like Molybdenum cofactor-binding domain 42
Phage tail proteins Phage tail proteins 42
Phage tail proteins gp5 N-terminal domain-like 42
6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 43
GroEL equatorial domain-like GroEL-intermediate domain like 41
GroEL-intermediate domain like GroEL apical domain-like 41
MetI-like MetI-like 42
ACT-like ACT-like 44
GroEL equatorial domain-like GroEL apical domain-like 41
RmlC-like cupins Homeodomain-like 42
Cupredoxins Cupredoxins 44
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 43
Sm-like ribonucleoproteins Mechanosensitive channel protein MscS (YggB), C-terminal domain 42
Mechanosensitive channel protein MscS (YggB), transmembrane region Sm-like ribonucleoproteins 42
CBS-domain pair FAD-binding/transporter-associated domain-like 41
P-loop containing nucleoside triphosphate hydrolases "Winged helix" DNA-binding domain 43
(Trans)glycosidases Glycosyl hydrolase domain 44
LeuD/IlvD-like Aconitase iron-sulfur domain 42
P-loop containing nucleoside triphosphate hydrolases FtsH protease domain-like 41
Phosphohistidine domain Phosphoenolpyruvate/pyruvate domain 44
FAD-binding/transporter-associated domain-like CO dehydrogenase flavoprotein C-terminal domain-like 42
EF-G C-terminal domain-like EF-G C-terminal domain-like 43
Translation proteins EF-G C-terminal domain-like 43
Mechanosensitive channel protein MscS (YggB), transmembrane region Mechanosensitive channel protein MscS (YggB), C-terminal domain 42
Thiamin diphosphate-binding fold (THDP-binding) TK C-terminal domain-like 43
ValRS/IleRS/LeuRS editing domain Nucleotidylyl transferase 32
Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 32
2Fe-2S ferredoxin-like 4Fe-4S ferredoxins 31
P-loop containing nucleoside triphosphate hydrolases post-AAA+ oligomerization domain-like 32
Galactose mutarotase-like E set domains 31
Nqo1 FMN-binding domain-like Nqo1 middle domain-like 32
HD-domain/PDEase-like ACT-like 32
Periplasmic binding protein-like II CheY-like 32
6-phosphogluconate dehydrogenase C-terminal domain-like ClpP/crotonase 32
MurCD N-terminal domain MurD-like peptide ligases, peptide-binding domain 32
CheY-like CheY-like 33
Periplasmic binding protein-like II Histidine-containing phosphotransfer domain, HPT domain 32
PDZ domain-like PDZ domain-like 32
Cytochrome c oxidase subunit II-like, transmembrane region Cupredoxins 32
gp5 N-terminal domain-like Phage fibre proteins 31
Methylated DNA-protein cysteine methyltransferase domain Methylated DNA-protein cysteine methyltransferase, C-terminal domain 32
4Fe-4S ferredoxins Formate dehydrogenase/DMSO reductase, domains 1-3 31
Rudiment single hybrid motif Single hybrid motif 32
Double Clp-N motif P-loop containing nucleoside triphosphate hydrolases 31
Nucleic acid-binding proteins RuvA domain 2-like 33
Ferritin-like HAD-like 31
Glutathione synthetase ATP-binding domain-like Phosphohistidine domain 33
Class II aaRS and biotin synthetases Class II aaRS ABD-related 33
Ferritin-like Calcium ATPase, transmembrane domain M 31
2Fe-2S ferredoxin-like Formate dehydrogenase/DMSO reductase, domains 1-3 31
Nqo1 middle domain-like Nqo1C-terminal domain-like 32
Ribosomal protein S5 domain 2-like EF-G C-terminal domain-like 32
Nqo1 FMN-binding domain-like Nqo1C-terminal domain-like 32
Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 32
Glutathione synthetase ATP-binding domain-like Single hybrid motif 32
Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like 32
Periplasmic binding protein-like II ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 32
Nucleic acid-binding proteins Class II aaRS and biotin synthetases 33
Nucleotidyltransferase HD-domain/PDEase-like 32
CorA soluble domain-like Magnesium transport protein CorA, transmembrane region 31
P-loop containing nucleoside triphosphate hydrolases EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 31
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex CoA-dependent acyltransferases 32
Rhodanese/Cell cycle control phosphatase Rhodanese/Cell cycle control phosphatase 32
Periplasmic binding protein-like II Homodimeric domain of signal transducing histidine kinase 32
PYP-like sensor domain (PAS domain) GAF domain-like 32
PreATP-grasp domain Single hybrid motif 32
NAD(P)-binding Rossmann-fold domains ClpP/crotonase 32
PurM N-terminal domain-like PurM C-terminal domain-like 32
Sensory domain-like Methyl-accepting chemotaxis protein (MCP) signaling domain 32
2Fe-2S ferredoxin-like ADC-like 31
Cupredoxins Cytochrome c 33
ValRS/IleRS/LeuRS editing domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 32
Translation proteins EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 31
Nucleotidyltransferase ACT-like 32
4Fe-4S ferredoxins ADC-like 31
Single hybrid motif Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 32
Ferritin-like Calcium ATPase, transduction domain A 31
NagB/RpiA/CoA transferase-like NagB/RpiA/CoA transferase-like 32
MurCD N-terminal domain MurD-like peptide ligases, catalytic domain 32
Nucleic acid-binding proteins P-loop containing nucleoside triphosphate hydrolases 33
Single hybrid motif CoA-dependent acyltransferases 32
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 32
Nucleic acid-binding proteins Nucleic acid-binding proteins 33
ClpP/crotonase ClpP/crotonase 32
E set domains (Trans)glycosidases 33
Phage tail proteins Phage fibre proteins 31
PYP-like sensor domain (PAS domain) C-terminal effector domain of the bipartite response regulators 21
Sensory domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 22
N-terminal domain of DnaB helicase P-loop containing nucleoside triphosphate hydrolases 21
Lysozyme-like beta-lactamase/transpeptidase-like 22
MoeA N-terminal region -like Molybdenum cofactor biosynthesis proteins 21
N-terminal domain of alpha and beta subunits of F1 ATP synthase P-loop containing nucleoside triphosphate hydrolases 21
Glutathione synthetase ATP-binding domain-like MurD-like peptide ligases, peptide-binding domain 21
R1 subunit of ribonucleotide reductase, N-terminal domain PFL-like glycyl radical enzymes 21
lambda repressor-like DNA-binding domains RmlC-like cupins 21
GreA transcript cleavage protein, N-terminal domain FKBP-like 21
Ada DNA repair protein, N-terminal domain (N-Ada 10) Homeodomain-like 22
Sensory domain-like Nucleotide cyclase 22
Ribosomal protein S5 domain 2-like Type II DNA topoisomerase 22
Actin-like ATPase domain Heat shock protein 70kD (HSP70), peptide-binding domain 22
PLP-binding barrel Alanine racemase C-terminal domain-like 22
LuxS/MPP-like metallohydrolase LuxS/MPP-like metallohydrolase 22
FAD/NAD(P)-binding domain FAD/NAD(P)-binding domain 22
Ligand-binding domain in the NO signalling and Golgi transport P-loop containing nucleoside triphosphate hydrolases 22
CheW-like CheY-like 22
Regulatory protein AraC Homeodomain-like 21
Phosphoenolpyruvate/pyruvate domain PK C-terminal domain-like 21
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheW-like 22
MoeA N-terminal region -like MoeA C-terminal domain-like 21
Ribosomal protein S5 domain 2-like Ribonuclease PH domain 2-like 22
TPR-like TPR-like 22
Aminoacid dehydrogenase-like, N-terminal domain Isocitrate/Isopropylmalate dehydrogenase-like 21
Translation proteins ThrRS/AlaRS common domain 22
tRNA-binding arm Class II aaRS and biotin synthetases 21
FAD/NAD(P)-binding domain FMN-linked oxidoreductases 22
Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases 22
Resolvase-like Homeodomain-like 21
Acetyl-CoA synthetase-like Thioesterase/thiol ester dehydrase-isomerase 21
Phosphoglucomutase, first 3 domains Phosphoglucomutase, first 3 domains 21
Aldolase 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 22
N-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase 21
DNA ligase/mRNA capping enzyme, catalytic domain Nucleic acid-binding proteins 22
Aldolase post-HMGL domain-like 22
Actin-like ATPase domain Heat shock protein 70kD (HSP70), C-terminal subdomain 22
FAD/NAD(P)-binding domain HI0933 insert domain-like 21
Histidine-containing phosphotransfer domain, HPT domain CheW-like 22
PapD-like Periplasmic chaperone C-domain 21
EAL domain-like CBS-domain pair 21
FabD/lysophospholipase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 21
Heat shock protein 70kD (HSP70), peptide-binding domain Heat shock protein 70kD (HSP70), C-terminal subdomain 22
Phosphoglucomutase, first 3 domains Phosphoglucomutase, C-terminal domain 21
Metallo-dependent phosphatases 5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain 22
NAD(P)-binding Rossmann-fold domains UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 21
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphoenolpyruvate/pyruvate domain 22
PK beta-barrel domain-like PK C-terminal domain-like 21
Leukotriene A4 hydrolase N-terminal domain Metalloproteases ("zincins"), catalytic domain 22
PRTase-like PRTase-like 21
HD-domain/PDEase-like TGS-like 21
NAD(P)-binding Rossmann-fold domains Isocitrate/Isopropylmalate dehydrogenase-like 21
Sensory domain-like Homodimeric domain of signal transducing histidine kinase 22
HMA, heavy metal-associated domain HMA, heavy metal-associated domain 22
PK beta-barrel domain-like Phosphoenolpyruvate/pyruvate domain 21
P-loop containing nucleoside triphosphate hydrolases C-terminal domain of alpha and beta subunits of F1 ATP synthase 21
6-phosphogluconate dehydrogenase C-terminal domain-like UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 21
Translation proteins Ribosomal protein S5 domain 2-like 21
Epsilon subunit of F1F0-ATP synthase N-terminal domain Epsilon subunit of F1F0-ATP synthase C-terminal domain 21
Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain Pyrimidine nucleoside phosphorylase C-terminal domain 21
Nitrite/Sulfite reductase N-terminal domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 22
Molybdenum cofactor biosynthesis proteins MoeA C-terminal domain-like 21
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Pyrimidine nucleoside phosphorylase C-terminal domain 21
GAF domain-like Homeodomain-like 22
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphohistidine domain 22
Nucleotidyltransferase Nucleotidyltransferase substrate binding subunit/domain 22
DsbC/DsbG N-terminal domain-like Thioredoxin-like 21
E set domains Glycosyl hydrolase domain 22
Type II DNA topoisomerase GyrA/ParC C-terminal domain-like 21
Cation efflux protein transmembrane domain-like Cation efflux protein cytoplasmic domain-like 22
Thiol:disulfide interchange protein DsbD, N-terminal domain (DsbD-alpha) Thioredoxin-like 22
TGS-like ACT-like 21
P-loop containing nucleoside triphosphate hydrolases Class I glutamine amidotransferase-like 21
L30e-like alpha/beta knot 21
Nucleic acid-binding proteins Translation proteins SH3-like domain 22
Ligand-binding domain in the NO signalling and Golgi transport Homeodomain-like 22
Glutathione synthetase ATP-binding domain-like MurD-like peptide ligases, catalytic domain 21
GAF domain-like P-loop containing nucleoside triphosphate hydrolases 22
Aconitase B, N-terminal domain LeuD/IlvD-like 21
MurE/MurF N-terminal domain MurD-like peptide ligases, peptide-binding domain 21
"Winged helix" DNA-binding domain "Winged helix" DNA-binding domain 22
Penicillin binding protein dimerisation domain beta-lactamase/transpeptidase-like 22
2Fe-2S ferredoxin-like alpha-helical ferredoxin 21
HAMP domain-like PYP-like sensor domain (PAS domain) 22
MurE/MurF N-terminal domain MurD-like peptide ligases, catalytic domain 21
Glutathione synthetase ATP-binding domain-like Phosphoenolpyruvate/pyruvate domain 22
ThrRS/AlaRS common domain Class II aaRS and biotin synthetases 22
GAF domain-like EAL domain-like 21
Aconitase B, N-terminal domain Aconitase iron-sulfur domain 21
EspE N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 22
Formyltransferase FMT C-terminal domain-like 21
GAF domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 22
CBS-domain pair Nucleotide cyclase 21
Nucleotidyltransferase TGS-like 21
Nucleotidyltransferase Poly A polymerase C-terminal region-like 21
Nucleotide-diphospho-sugar transferases TPR-like 21
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Type II DNA topoisomerase 22
Molybdenum cofactor-binding domain Molybdenum cofactor-binding domain 21
Ribonuclease H-like RuvA domain 2-like 11
FAD/NAD(P)-binding domain Nitrite and sulphite reductase 4Fe-4S domain-like 11
Sec63 N-terminal domain-like Nucleotidyltransferase 11
DNA primase core DNA primase DnaG, C-terminal domain 11
FliG FliG 11
Pre-protein crosslinking domain of SecA Helical scaffold and wing domains of SecA 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) SIS domain 11
Macro domain-like Zn-dependent exopeptidases 11
Nucleotidyltransferase PHP domain-like 11
Class II aaRS and biotin synthetases C-terminal domain of transcriptional repressors 11
RNase III domain-like dsRNA-binding domain-like 11
Galactose mutarotase-like Glycosyl hydrolase domain 11
Nucleotidyltransferase Nucleotidyltransferase 11
Nucleotide-diphospho-sugar transferases Trimeric LpxA-like enzymes 11
Cytidine deaminase-like Dihydrofolate reductase-like 11
NAD(P)-binding Rossmann-fold domains 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
alpha/beta-Hydrolases NTF2-like 11
Globin-like Riboflavin synthase domain-like 11
Insert subdomain of RNA polymerase alpha subunit RBP11-like subunits of RNA polymerase 11
Flavoproteins Riboflavin synthase domain-like 11
CO dehydrogenase ISP C-domain like CO dehydrogenase flavoprotein C-terminal domain-like 11
Periplasmic binding protein-like II MetI-like 11
Transmembrane di-heme cytochromes a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 11
Carbamoyl phosphate synthetase, small subunit N-terminal domain Class I glutamine amidotransferase-like 11
PLP-dependent transferases Ornithine decarboxylase C-terminal domain 11
P-loop containing nucleoside triphosphate hydrolases Hypothetical protein YjiA, C-terminal domain 11
ClpP/crotonase NfeD domain-like 11
"Winged helix" DNA-binding domain Homeodomain-like 11
PYP-like sensor domain (PAS domain) Homeodomain-like 11
ADC synthase D-aminoacid aminotransferase-like PLP-dependent enzymes 11
Cytochrome P450 Ferredoxin reductase-like, C-terminal NADP-linked domain 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase HSP90 C-terminal domain 11
Glutathione synthetase ATP-binding domain-like Carbamoyl phosphate synthetase, large subunit connection domain 11
HAMP domain-like Histidine-containing phosphotransfer domain, HPT domain 11
Histidine-containing phosphotransfer domain, HPT domain CheY-binding domain of CheA 11
P-loop containing nucleoside triphosphate hydrolases HRDC-like 11
Alkaline phosphatase-like Concanavalin A-like lectins/glucanases 11
Nucleotide-binding domain Nucleotide-binding domain 11
PYP-like sensor domain (PAS domain) Histidine-containing phosphotransfer domain, HPT domain 11
P-loop containing nucleoside triphosphate hydrolases Initiation factor IF2/eIF5b, domain 3 11
N-terminal domain of bifunctional PutA protein FAD-linked oxidoreductase 11
P-loop containing nucleoside triphosphate hydrolases TGS-like 11
Coiled-coil domain of nucleotide exchange factor GrpE Head domain of nucleotide exchange factor GrpE 11
FAD-binding/transporter-associated domain-like alpha-helical ferredoxin 11
P-loop containing nucleoside triphosphate hydrolases Signal peptide-binding domain 11
PDZ domain-like ClpP/crotonase 11
Thioredoxin-like Thioredoxin-like 11
TGS-like Class II aaRS and biotin synthetases 11
FAD-linked oxidoreductase ALDH-like 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) PRTase-like 11
Glutamine synthetase/guanido kinase GatB/YqeY motif 11
Nucleic acid-binding proteins PheT/TilS domain 11
P-loop containing nucleoside triphosphate hydrolases TrpR-like 11
Tricorn protease N-terminal domain Galactose-binding domain-like 11
Acid phosphatase/Vanadium-dependent haloperoxidase Pectin lyase-like 11
Translation proteins Initiation factor IF2/eIF5b, domain 3 11
Fe-S cluster assembly (FSCA) domain-like P-loop containing nucleoside triphosphate hydrolases 11
Domain of the SRP/SRP receptor G-proteins P-loop containing nucleoside triphosphate hydrolases 11
MFS general substrate transporter Glycerol-3-phosphate (1)-acyltransferase 11
Translation proteins PRC-barrel domain 11
PreATP-grasp domain Carbamoyl phosphate synthetase, large subunit connection domain 11
N-terminal domain of MutM-like DNA repair proteins S13-like H2TH domain 11
Caspase-like HCP-like 11
Chaperone J-domain HSC20 (HSCB), C-terminal oligomerisation domain 11
Class II aaRS and biotin synthetases Translation proteins 11
Pili subunits GspK insert domain-like 11
CheY-like EAL domain-like 11
DnaK suppressor protein DksA, alpha-hairpin domain Glucocorticoid receptor-like (DNA-binding domain) 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) ThrRS/AlaRS common domain 11
Subtilisin-like Galactose-binding domain-like 11
PPK N-terminal domain-like PHP14-like 11
PPK N-terminal domain-like Phospholipase D/nuclease 11
cAMP-binding domain-like CBS-domain pair 11
Ribbon-helix-helix FAD-linked oxidoreductase 11
PIN domain-like 5' to 3' exonuclease, C-terminal subdomain 11
FAD/NAD(P)-binding domain Nitrite/Sulfite reductase N-terminal domain-like 11
GIY-YIG endonuclease RuvA domain 2-like 11
Transcription factor NusA, N-terminal domain Prokaryotic type KH domain (KH-domain type II) 11
DNA/RNA polymerases Lesion bypass DNA polymerase (Y-family), little finger domain 11
Carbamoyl phosphate synthetase, large subunit connection domain Methylglyoxal synthase-like 11
Cryptochrome/photolyase, N-terminal domain Cryptochrome/photolyase FAD-binding domain 11
MesJ substrate recognition domain-like PheT/TilS domain 11
Smc hinge domain Tropomyosin 11
Chorismate mutase II ACT-like 11
P-loop containing nucleoside triphosphate hydrolases TRCF domain-like 11
S-adenosylmethionine synthetase S-adenosylmethionine synthetase 11
Tubulin nucleotide-binding domain-like Tubulin C-terminal domain-like 11
CoA-transferase family III (CaiB/BaiF) CoA-transferase family III (CaiB/BaiF) 11
Chaperone J-domain DnaJ/Hsp40 cysteine-rich domain 11
Ribosomal protein S5 domain 2-like Nucleic acid-binding proteins 11
Homo-oligomeric flavin-containing Cys decarboxylases, HFCD CoaB-like 11
Homeodomain-like Probable bacterial effector-binding domain 11
Thioredoxin-like TPR-like 11
Glutathione synthetase ATP-binding domain-like ClpP/crotonase 11
Nucleotidylyl transferase Alpha-L RNA-binding motif 11
Obg GTP-binding protein N-terminal domain P-loop containing nucleoside triphosphate hydrolases 11
Carbon-nitrogen hydrolase Adenine nucleotide alpha hydrolases-like 11
PUA domain-like S-adenosyl-L-methionine-dependent methyltransferases 11
Tryptophan synthase beta subunit-like PLP-dependent enzymes ACT-like 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
TolB, N-terminal domain Tricorn protease N-terminal domain 11
PIN domain-like P-loop containing nucleoside triphosphate hydrolases 11
Ada DNA repair protein, N-terminal domain (N-Ada 10) Methylated DNA-protein cysteine methyltransferase, C-terminal domain 11
Ada DNA repair protein, N-terminal domain (N-Ada 10) Methylated DNA-protein cysteine methyltransferase domain 11
CheY-binding domain of CheA Homodimeric domain of signal transducing histidine kinase 11
Phoshotransferase/anion transport protein HPr-like 11
Adenine nucleotide alpha hydrolases-like PheT/TilS domain 11
Nucleotidyltransferase substrate binding subunit/domain ACT-like 11
Carbamate kinase-like ACT-like 11
RuvA domain 2-like RuvA domain 2-like 11
PLP-dependent transferases PLP-dependent transferases 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Nucleic acid-binding proteins 11
PurM N-terminal domain-like PurM N-terminal domain-like 11
ParB/Sulfiredoxin Myosin rod fragments 11
PrpR receptor domain-like P-loop containing nucleoside triphosphate hydrolases 11
Zinc beta-ribbon DNA primase DnaG, C-terminal domain 11
Nucleotide-diphospho-sugar transferases EspE N-terminal domain-like 11
Molybdenum cofactor-binding domain Bet v1-like 11
Actin-like ATPase domain HD-domain/PDEase-like 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) FMN-linked oxidoreductases 11
FAD-linked oxidases, C-terminal domain alpha-helical ferredoxin 11
Nucleic acid-binding proteins DNA helicase RuvA subunit, C-terminal domain 11
PurS-like FGAM synthase PurL, linker domain 11
Ribosomal protein L7/12, oligomerisation (N-terminal) domain ClpS-like 11
Cobalamin (vitamin B12)-binding domain Methionine synthase activation domain-like 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases tRNA-binding arm 11
Thiamin diphosphate-binding fold (THDP-binding) Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 11
Protein kinase-like (PK-like) P-loop containing nucleoside triphosphate hydrolases 11
Periplasmic binding protein-like II PYP-like sensor domain (PAS domain) 11
Globin-like Ferredoxin reductase-like, C-terminal NADP-linked domain 11
Class I glutamine amidotransferase-like GMP synthetase C-terminal dimerisation domain 11
PUA domain-like Ribosomal protein S5 domain 2-like 11
Translation proteins Translation proteins 11
Single hybrid motif Single hybrid motif 11
Tex N-terminal region-like Nucleic acid-binding proteins 11
Galactose mutarotase-like (Trans)glycosidases 11
Carbamate kinase-like PUA domain-like 11
Carbamate kinase-like Acyl-CoA N-acyltransferases (Nat) 11
HPr-like Phosphohistidine domain 11
Glutathione synthetase ATP-binding domain-like Succinyl-CoA synthetase domains 11
Sialidases Sialidases 11
post-HMGL domain-like 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 11
DNA repair protein MutS, domain II DNA repair protein MutS, domain III 11
Prokaryotic type KH domain (KH-domain type II) Prokaryotic type KH domain (KH-domain type II) 11
FKBP-like FKBP-like 11
FMN-binding split barrel UbiD C-terminal domain-like 11
TPR-like HCP-like 11
PIN domain-like DNA/RNA polymerases 11
TrmE connector domain P-loop containing nucleoside triphosphate hydrolases 11
DnaJ/Hsp40 cysteine-rich domain HSP40/DnaJ peptide-binding domain 11
NAD(P)-binding Rossmann-fold domains ACT-like 11
UBA-like Elongation factor Ts (EF-Ts), dimerisation domain 11
Methionine synthase domain Methionine synthase activation domain-like 11
PurM N-terminal domain-like Class I glutamine amidotransferase-like 11
P-loop containing nucleoside triphosphate hydrolases RecA protein, C-terminal domain 11
P-loop containing nucleoside triphosphate hydrolases ACT-like 11
PTS system IIB component-like PTS system IIB component-like 11
Ada DNA repair protein, N-terminal domain (N-Ada 10) DNA-glycosylase 11
Putative DNA-binding domain Translation proteins 11
E set domains E set domains 11
Nitrite and sulphite reductase 4Fe-4S domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 11
PheT/TilS domain Anticodon-binding domain of PheRS 11
P-loop containing nucleoside triphosphate hydrolases Helical scaffold and wing domains of SecA 11
DNA repair protein MutS, domain I P-loop containing nucleoside triphosphate hydrolases 11
Adenine nucleotide alpha hydrolases-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Sensory domain-like PYP-like sensor domain (PAS domain) 11
GIY-YIG endonuclease C-terminal UvrC-binding domain of UvrB 11
P-loop containing nucleoside triphosphate hydrolases ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Nucleic acid-binding proteins S-adenosyl-L-methionine-dependent methyltransferases 11
Chaperone J-domain HSP40/DnaJ peptide-binding domain 11
alpha/beta-Hydrolases alpha/beta-Hydrolases 11
Nucleotidylyl transferase An anticodon-binding domain of class I aminoacyl-tRNA synthetases 11
ValRS/IleRS/LeuRS editing domain tRNA-binding arm 11
His-Me finger endonucleases Restriction endonuclease-like 11
Clc chloride channel CBS-domain pair 11
Nucleic acid-binding proteins ArfGap/RecO-like zinc finger 11
Ribosomal protein S5 domain 2-like GHMP Kinase, C-terminal domain 11
ThrRS/AlaRS common domain Class II aaRS ABD-related 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
Ribosomal protein S5 domain 2-like HSP90 C-terminal domain 11
YbaK/ProRS associated domain Class II aaRS ABD-related 11
Thioredoxin-like FAD/NAD(P)-binding domain 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase DNA mismatch repair protein MutL 11
alpha/beta-Hydrolases NAD(P)-binding Rossmann-fold domains 11
Rudiment single hybrid motif ClpP/crotonase 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Alpha subunit of glutamate synthase, C-terminal domain 11
alpha-helical ferredoxin Nucleotide-binding domain 11
Dihydropteroate synthetase-like Methionine synthase domain 11
UROD/MetE-like UROD/MetE-like 11
Bet v1-like Bet v1-like 11
Homeodomain-like Methylated DNA-protein cysteine methyltransferase domain 11
Ribbon-helix-helix N-terminal domain of bifunctional PutA protein 11
CheC-like Surface presentation of antigens (SPOA) 11
Phase 1 flagellin Phase 1 flagellin 11
Dihydropteroate synthetase-like Methionine synthase activation domain-like 11
Adenine nucleotide alpha hydrolases-like DHS-like NAD/FAD-binding domain 11
YajQ-like YajQ-like 11
Putative DNA-binding domain Citrate synthase 11
ACT-like Formyltransferase 11
CO dehydrogenase molybdoprotein N-domain-like Bet v1-like 11
(Trans)glycosidases Protein kinase-like (PK-like) 11
Homeodomain-like DNA-glycosylase 11
S13-like H2TH domain Glucocorticoid receptor-like (DNA-binding domain) 11
TATA-box binding protein-like DNA-glycosylase 11
Creatinase/prolidase N-terminal domain Creatinase/aminopeptidase 11
Nucleotidyltransferase substrate binding subunit/domain Nucleotidyltransferase substrate binding subunit/domain 11
PurS-like PurM N-terminal domain-like 11
FGAM synthase PurL, linker domain PurM C-terminal domain-like 11
Nitrite/Sulfite reductase N-terminal domain-like Nitrite/Sulfite reductase N-terminal domain-like 11
Nucleic acid-binding proteins BRCT domain 11
Homeodomain-like Ribonuclease H-like 11
DNA repair protein MutS, domain II P-loop containing nucleoside triphosphate hydrolases 11
Glycosyl hydrolase domain Protein kinase-like (PK-like) 11
Cobalamin (vitamin B12)-binding domain P-loop containing nucleoside triphosphate hydrolases 11
Nucleotidylyl transferase Riboflavin kinase-like 11
NAD(P)-binding Rossmann-fold domains Glutamyl tRNA-reductase dimerization domain 11
DNA-glycosylase Nudix 11
PHP14-like Phospholipase D/nuclease 11
GroES-like GroES-like 11
Trigger factor ribosome-binding domain Triger factor/SurA peptide-binding domain-like 11
Cytochrome P450 Flavoproteins 11
Prokaryotic type KH domain (KH-domain type II) Ribosomal protein S3 C-terminal domain 11
TGS-like ThrRS/AlaRS common domain 11
S-adenosyl-L-methionine-dependent methyltransferases P-loop containing nucleoside triphosphate hydrolases 11
Tex N-terminal region-like Ribonuclease H-like 11
Ribonuclease H-like Nucleic acid-binding proteins 11
PEP carboxykinase N-terminal domain PEP carboxykinase-like 11
Periplasmic binding protein-like II Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain 11
Metalloproteases ("zincins"), catalytic domain PDZ domain-like 11
HAMP domain-like GAF domain-like 11
(Trans)glycosidases Glycoside hydrolase/deacetylase 11
Putative DNA-binding domain Initiation factor IF2/eIF5b, domain 3 11
HAMP domain-like Nucleotide cyclase 11
Elongation factor Ts (EF-Ts), dimerisation domain Elongation factor Ts (EF-Ts), dimerisation domain 11
Methylglyoxal synthase-like Cytidine deaminase-like 11
beta-lactamase/transpeptidase-like Penicillin-binding protein associated domain 11
Putative DNA-binding domain P-loop containing nucleoside triphosphate hydrolases 11
PurM C-terminal domain-like Class I glutamine amidotransferase-like 11
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 Eukaryotic type KH-domain (KH-domain type I) 11
PrpR receptor domain-like Homeodomain-like 11
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 Nucleic acid-binding proteins 11
Homeodomain-like TATA-box binding protein-like 11
Putative DNA-binding domain Class II aaRS and biotin synthetases 11
Single hybrid motif FAD/NAD(P)-binding domain 11
Rho N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 11
Sigma2 domain of RNA polymerase sigma factors NTF2-like 11
Class II aaRS and biotin synthetases YbaK/ProRS associated domain 11
N-terminal domain of MutM-like DNA repair proteins Glucocorticoid receptor-like (DNA-binding domain) 11
Ribosomal protein L6 Ribosomal protein L6 11
Glutamyl tRNA-reductase catalytic, N-terminal domain NAD(P)-binding Rossmann-fold domains 11
Glucocorticoid receptor-like (DNA-binding domain) P-loop containing nucleoside triphosphate hydrolases 11
Diaminopimelate epimerase-like Diaminopimelate epimerase-like 11
S-adenosyl-L-methionine-dependent methyltransferases NAD(P)-binding Rossmann-fold domains 11
NagB/RpiA/CoA transferase-like 4Fe-4S ferredoxins 11
Nucleic acid-binding proteins Anticodon-binding domain of PheRS 11
Putative DNA-binding domain Anticodon-binding domain of PheRS 11
PUA domain-like alpha/beta knot 11
Zinc beta-ribbon DNA primase core 11
Class II aaRS and biotin synthetases Anticodon-binding domain of PheRS 11
Cobalamin (vitamin B12)-binding domain Cobalamin (vitamin B12)-dependent enzymes 11
PUA domain-like P-loop containing nucleoside triphosphate hydrolases 11
Sigma3 and sigma4 domains of RNA polymerase sigma factors NTF2-like 11
TGS-like Class II aaRS ABD-related 11
Class II aaRS and biotin synthetases GAD domain-like 11
Bacterial muramidases Lysozyme-like 11
Class I glutamine amidotransferase-like Adenine nucleotide alpha hydrolases-like 11
DNA primase core P-loop containing nucleoside triphosphate hydrolases 11
Nucleotidylyl transferase Nucleic acid-binding proteins 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases Nucleic acid-binding proteins 11
L9 N-domain-like Ribosomal protein L9 C-domain 11
PheT/TilS domain Class II aaRS and biotin synthetases 11
RuvA domain 2-like BRCT domain 11
CheY-binding domain of CheA CheW-like 11
Ribonuclease H-like DNA/RNA polymerases 11
Thioesterase/thiol ester dehydrase-isomerase Isocitrate/Isopropylmalate dehydrogenase-like 11
NAD(P)-binding Rossmann-fold domains LDH C-terminal domain-like 11
Fe,Mn superoxide dismutase (SOD), N-terminal domain Fe,Mn superoxide dismutase (SOD), C-terminal domain 11
NusB-like S-adenosyl-L-methionine-dependent methyltransferases 11
Ribbon-helix-helix ALDH-like 11
DNA repair protein MutS, domain III P-loop containing nucleoside triphosphate hydrolases 11
PreATP-grasp domain Methylglyoxal synthase-like 11
DNA polymerase beta, N-terminal domain-like Sec63 N-terminal domain-like 11
Adenine nucleotide alpha hydrolases-like GMP synthetase C-terminal dimerisation domain 11
Rad51 N-terminal domain-like Rad51 N-terminal domain-like 11
HPr-like Phosphoenolpyruvate/pyruvate domain 11
FGAM synthase PurL, linker domain PurM N-terminal domain-like 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Nucleotidylyl transferase 11
P-loop containing nucleoside triphosphate hydrolases Smc hinge domain 11
CheY-like Methylesterase CheB, C-terminal domain 11
RuvA domain 2-like MCP/YpsA-like 11
alpha/beta-Hydrolases Galactose-binding domain-like 11
FAD-linked reductases, C-terminal domain 4Fe-4S ferredoxins 11
S-adenosyl-L-methionine-dependent methyltransferases Putative methyltransferase TM0872, insert domain 11
Aspartate/glutamate racemase Aspartate/glutamate racemase 11
P-loop containing nucleoside triphosphate hydrolases Pre-protein crosslinking domain of SecA 11
Ribosomal protein S5 domain 2-like Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 11
DNA polymerase beta, N-terminal domain-like PHP domain-like 11
FGAM synthase PurL, linker domain Class I glutamine amidotransferase-like 11
P-loop containing nucleoside triphosphate hydrolases Cobalamin (vitamin B12)-dependent enzymes 11
C-terminal UvrC-binding domain of UvrB RuvA domain 2-like 11
ABC transporter transmembrane region CheY-like 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain II 11
NAD(P)-binding Rossmann-fold domains Succinyl-CoA synthetase domains 11
Restriction endonuclease-like Zinc beta-ribbon 11
Ribosomal protein S5 domain 2-like DNA mismatch repair protein MutL 11
GAF domain-like Homodimeric domain of signal transducing histidine kinase 11
Urease metallochaperone UreE, N-terminal domain Urease metallochaperone UreE, C-terminal domain 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) Translation proteins 11
Riboflavin synthase domain-like Riboflavin synthase domain-like 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain III 11
HprK N-terminal domain-like PEP carboxykinase-like 11
RBP11-like subunits of RNA polymerase C-terminal domain of RNA polymerase alpha subunit 11
"Winged helix" DNA-binding domain LexA/Signal peptidase 11
DNA polymerase beta, N-terminal domain-like Nucleotidyltransferase 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
Folate-binding domain Aminomethyltransferase beta-barrel domain 11
Chorismate mutase II Periplasmic binding protein-like II 11
Chemotaxis receptor methyltransferase CheR, N-terminal domain S-adenosyl-L-methionine-dependent methyltransferases 11
Nucleic acid-binding proteins GAD domain-like 11
CO dehydrogenase ISP C-domain like FAD-binding/transporter-associated domain-like 11
Nucleic acid-binding proteins Putative DNA-binding domain 11
PrpR receptor domain-like PYP-like sensor domain (PAS domain) 11
P-loop containing nucleoside triphosphate hydrolases Prokaryotic type KH domain (KH-domain type II) 11
Fumarylacetoacetate hydrolase, FAH, N-terminal domain FAH 11
Methionine synthase domain Cobalamin (vitamin B12)-binding domain 11
RuvA domain 2-like DNA helicase RuvA subunit, C-terminal domain 11
Transcription factor NusA, N-terminal domain Nucleic acid-binding proteins 11
PYP-like sensor domain (PAS domain) Methyl-accepting chemotaxis protein (MCP) signaling domain 11
Hsp33 domain HSP33 redox switch-like 11
Glutamyl tRNA-reductase catalytic, N-terminal domain Glutamyl tRNA-reductase dimerization domain 11
Periplasmic binding protein-like I Homeodomain-like 11
2Fe-2S ferredoxin-like CO dehydrogenase flavoprotein C-terminal domain-like 11
Homeodomain-like Methylated DNA-protein cysteine methyltransferase, C-terminal domain 11
Glutathione synthetase ATP-binding domain-like Methylglyoxal synthase-like 11
FAD/NAD(P)-binding domain 4Fe-4S ferredoxins 11
DNA ligase/mRNA capping enzyme, catalytic domain RuvA domain 2-like 11
YjeF N-terminal domain-like Ribokinase-like 11
alpha/beta-Hydrolases AhpD-like 11
2Fe-2S ferredoxin-like FAD-binding/transporter-associated domain-like 11
Ribonuclease PH domain 2-like Ribonuclease PH domain 2-like 11
P-loop containing nucleoside triphosphate hydrolases CarD-like 11
Trigger factor ribosome-binding domain FKBP-like 11
Single hybrid motif FAD/NAD-linked reductases, dimerisation (C-terminal) domain 11
Glutamine synthetase, N-terminal domain Glutamine synthetase/guanido kinase 11
Dihydropteroate synthetase-like Cobalamin (vitamin B12)-binding domain 11
Tex N-terminal region-like RuvA domain 2-like 11
FAD-binding/transporter-associated domain-like Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain 11
Adenine nucleotide alpha hydrolases-like Argininosuccinate synthetase, C-terminal domain 11
FMN-linked oxidoreductases Alpha subunit of glutamate synthase, C-terminal domain 11
Ribosomal L11/L12e N-terminal domain Ribosomal protein L11, C-terminal domain 11
Adenine nucleotide alpha hydrolases-like Adenine nucleotide alpha hydrolases-like 11
DNA topoisomerase I domain DNA breaking-rejoining enzymes 11
Ribonuclease PH domain 2-like Nucleic acid-binding proteins 11
Pseudouridine synthase PUA domain-like 11
Nucleic acid-binding proteins Prokaryotic type KH domain (KH-domain type II) 11
PIN domain-like Ribonuclease H-like 11
Nitrous oxide reductase, N-terminal domain Cupredoxins 11
Ada DNA repair protein, N-terminal domain (N-Ada 10) TATA-box binding protein-like 11
PurM C-terminal domain-like PurM C-terminal domain-like 11
NAD(P)-binding Rossmann-fold domains TrkA C-terminal domain-like 11
Eukaryotic type KH-domain (KH-domain type I) Nucleic acid-binding proteins 11
ABC transporter transmembrane region ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
PreATP-grasp domain ClpP/crotonase 11
CheY-binding domain of CheA ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Ribonuclease PH domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
PheT/TilS domain Putative DNA-binding domain 11
PurS-like Class I glutamine amidotransferase-like 11
Heme-dependent peroxidases Heme-dependent peroxidases 11
GAF domain-like GAF domain-like 11
Class I glutamine amidotransferase-like LD-carboxypeptidase A C-terminal domain-like 11
5' to 3' exonuclease, C-terminal subdomain DNA/RNA polymerases 11
Cytochrome P450 Riboflavin synthase domain-like 11
Prokaryotic type KH domain (KH-domain type II) Rad51 N-terminal domain-like 11
Voltage-gated potassium channels E set domains 11
YhbC-like, N-terminal domain YhbC-like, C-terminal domain 11
"Winged helix" DNA-binding domain NagB/RpiA/CoA transferase-like 11
KorB DNA-binding domain-like Myosin rod fragments 11
Phoshotransferase/anion transport protein Phosphohistidine domain 11
lambda repressor-like DNA-binding domains LexA/Signal peptidase 11
Nucleic acid-binding proteins Rad51 N-terminal domain-like 11
Subtilisin-like PKD domain 11
DNA clamp DNA clamp 11
PurS-like PurM C-terminal domain-like 11
Adenine nucleotide alpha hydrolases-like MesJ substrate recognition domain-like 11
Galactose-binding domain-like Galactose-binding domain-like 11
HAMP domain-like EAL domain-like 11
CBS-domain pair Inosine monophosphate dehydrogenase (IMPDH) 11
FMN-linked oxidoreductases Nucleotide-binding domain 11
Rho N-terminal domain-like Nucleic acid-binding proteins 11
PH0987 N-terminal domain-like Cyclophilin-like 11
DNA ligase/mRNA capping enzyme, catalytic domain BRCT domain 11
"Winged helix" DNA-binding domain MOP-like 11
Thioesterase/thiol ester dehydrase-isomerase Thioesterase/thiol ester dehydrase-isomerase 11
PYP-like sensor domain (PAS domain) P-loop containing nucleoside triphosphate hydrolases 11
DNA breaking-rejoining enzymes DNA breaking-rejoining enzymes 11
"Winged helix" DNA-binding domain HRDC-like 11
PreATP-grasp domain PreATP-grasp domain 11
Transcription factor NusA, N-terminal domain Rad51 N-terminal domain-like 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Nucleotidylyl transferase 11
Glutathione synthetase ATP-binding domain-like Glutathione synthetase ATP-binding domain-like 11
YrdC/RibB RibA-like 11
Flavoproteins Ferredoxin reductase-like, C-terminal NADP-linked domain 11
Cytochrome c oxidase subunit II-like, transmembrane region Cytochrome c 11
5' to 3' exonuclease, C-terminal subdomain Ribonuclease H-like 11
HSP40/DnaJ peptide-binding domain HSP40/DnaJ peptide-binding domain 11
HlyD-like secretion proteins HlyD-like secretion proteins 11
Histidine-containing phosphotransfer domain, HPT domain Histidine-containing phosphotransfer domain, HPT domain 11
P-loop containing nucleoside triphosphate hydrolases Tropomyosin 11
Homodimeric domain of signal transducing histidine kinase CheW-like 11
Periplasmic binding protein-like II ACT-like 11
Class II aaRS and biotin synthetases Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) 11
lambda repressor-like DNA-binding domains Cyanase C-terminal domain 11
Single hybrid motif ClpP/crotonase 11
MOP-like MOP-like 11
Insert subdomain of RNA polymerase alpha subunit C-terminal domain of RNA polymerase alpha subunit 11
Periplasmic binding protein-like II Periplasmic binding protein-like II 11
NagB/RpiA/CoA transferase-like D-ribose-5-phosphate isomerase (RpiA), lid domain 11
dsRNA-binding domain-like Ribosomal protein S5 domain 2-like 11
P-loop containing nucleoside triphosphate hydrolases C-terminal UvrC-binding domain of UvrB 11
beta-lactamase/transpeptidase-like beta-lactamase/transpeptidase-like 11
DinB/YfiT-like putative metalloenzymes C-type lectin-like 11
Nucleotidyltransferase substrate binding subunit/domain HD-domain/PDEase-like 11
Lysozyme-like LysM domain 11
Phoshotransferase/anion transport protein Phosphoenolpyruvate/pyruvate domain 11
(Trans)glycosidases (Trans)glycosidases 11
Adenine nucleotide alpha hydrolases-like Homodimeric domain of signal transducing histidine kinase 11
Xylose isomerase-like Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 11
Phoshotransferase/anion transport protein Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain 11
Ribonuclease PH domain 2-like Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 11
N-terminal domain of bifunctional PutA protein ALDH-like 11
Nucleotidylyl transferase Ribosomal protein L25-like 11
Aldolase AFP III-like domain 11
Nucleotidylyl transferase tRNA-binding arm 11
N-utilization substance G protein NusG, N-terminal domain Translation proteins SH3-like domain 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain ACT-like 11
Nucleotide-binding domain FAD/NAD(P)-binding domain 11
Sec63 N-terminal domain-like PHP domain-like 11
CarD-like TRCF domain-like 11
HPr-like Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain 11
Ribosomal protein S5 domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11

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