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Domain combination pairs in Sinorhizobium medicae WSM419

All pairs of domain combinations at the superfamily level are listed here.
The identification of domain pairs does not account for the possibility of non-contiguous domains. Inserted, or interlaced, domains are seen as having a simple pair ordering.

  • For a list of unique full length architectures for this genome click here (can be slow).
Adjacent domain pairs graph

Graph of adjacent domain pairs.


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Domain combination pairs

763 domain combination pairs.
Click on a column heading to sort that column, or the 'View' button to see domain architetures for that domain pair combination.

Superfamily (N) Superfamily (C) Number of occurrances Number unique
"Winged helix" DNA-binding domain Periplasmic binding protein-like II 851
P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases 7114
P-loop containing nucleoside triphosphate hydrolases MOP-like 542
"Winged helix" DNA-binding domain GntR ligand-binding domain-like 423
NAD(P)-binding Rossmann-fold domains Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 356
Homodimeric domain of signal transducing histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 3321
lambda repressor-like DNA-binding domains Periplasmic binding protein-like I 322
NAD(P)-binding Rossmann-fold domains GroES-like 286
FAD/NAD(P)-binding domain FAD-linked reductases, C-terminal domain 265
Homeodomain-like Homeodomain-like 258
Composite domain of metallo-dependent hydrolases Metallo-dependent hydrolases 246
Multidrug resistance efflux transporter EmrE Multidrug resistance efflux transporter EmrE 242
NAD(P)-binding Rossmann-fold domains 6-phosphogluconate dehydrogenase C-terminal domain-like 246
Actin-like ATPase domain Actin-like ATPase domain 227
CheY-like C-terminal effector domain of the bipartite response regulators 223
Thioredoxin-like GST C-terminal domain-like 211
Homeodomain-like Tetracyclin repressor-like, C-terminal domain 182
"Winged helix" DNA-binding domain Dimeric alpha+beta barrel 171
PYP-like sensor domain (PAS domain) ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 1716
Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) 164
Formate/glycerate dehydrogenase catalytic domain-like NAD(P)-binding Rossmann-fold domains 152
ABC transporter transmembrane region P-loop containing nucleoside triphosphate hydrolases 143
Nucleotide cyclase EAL domain-like 136
PYP-like sensor domain (PAS domain) Homodimeric domain of signal transducing histidine kinase 1312
Sigma2 domain of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 124
beta-Roll beta-Roll 128
Homeodomain-like Ribonuclease H-like 113
MetI-like MetI-like 112
"Winged helix" DNA-binding domain GAF domain-like 112
FAD/NAD(P)-binding domain FAD/NAD-linked reductases, dimerisation (C-terminal) domain 113
Zn-dependent exopeptidases Bacterial exopeptidase dimerisation domain 111
PYP-like sensor domain (PAS domain) PYP-like sensor domain (PAS domain) 1010
Folate-binding domain Aminomethyltransferase beta-barrel domain 104
Acyl-CoA dehydrogenase NM domain-like Acyl-CoA dehydrogenase C-terminal domain-like 103
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheY-like 1010
Thiamin diphosphate-binding fold (THDP-binding) DHS-like NAD/FAD-binding domain 102
cAMP-binding domain-like "Winged helix" DNA-binding domain 101
Thiolase-like Thiolase-like 101
PreATP-grasp domain Glutathione synthetase ATP-binding domain-like 105
Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain 105
Enolase N-terminal domain-like Enolase C-terminal domain-like 102
P-loop containing nucleoside triphosphate hydrolases Translation proteins 97
Thiamin diphosphate-binding fold (THDP-binding) TK C-terminal domain-like 94
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB transmembrane domain 84
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 84
2Fe-2S ferredoxin-like CO dehydrogenase ISP C-domain like 83
Homodimeric domain of signal transducing histidine kinase CheY-like 88
"Winged helix" DNA-binding domain Chorismate lyase-like 81
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 84
Nucleotide cyclase TPR-like 86
lambda repressor-like DNA-binding domains RmlC-like cupins 82
CheY-like P-loop containing nucleoside triphosphate hydrolases 84
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 84
FAD-binding/transporter-associated domain-like FAD-linked oxidases, C-terminal domain 82
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB transmembrane domain 84
Pheromone-binding domain of LuxR-like quorum-sensing transcription factors C-terminal effector domain of the bipartite response regulators 82
P-loop containing nucleoside triphosphate hydrolases Homeodomain-like 73
Aminoacid dehydrogenase-like, N-terminal domain NAD(P)-binding Rossmann-fold domains 73
Homeodomain-like SIS domain 71
FAD/NAD(P)-binding domain Aminomethyltransferase beta-barrel domain 72
FAD/NAD(P)-binding domain Folate-binding domain 72
Glutamine synthetase, N-terminal domain Glutamine synthetase/guanido kinase 71
Class I glutamine amidotransferase-like Homeodomain-like 72
(Trans)glycosidases Glycosyl hydrolase domain 74
Sm-like ribonucleoproteins Mechanosensitive channel protein MscS (YggB), C-terminal domain 73
IlvD/EDD N-terminal domain-like LeuD/IlvD-like 71
Riboflavin synthase domain-like Ferredoxin reductase-like, C-terminal NADP-linked domain 74
Glutathione synthetase ATP-binding domain-like Rudiment single hybrid motif 63
PreATP-grasp domain Rudiment single hybrid motif 63
Mechanosensitive channel protein MscS (YggB), transmembrane region Sm-like ribonucleoproteins 62
Formate dehydrogenase/DMSO reductase, domains 1-3 ADC-like 63
CheY-like Homeodomain-like 62
CO dehydrogenase molybdoprotein N-domain-like Molybdenum cofactor-binding domain 61
PYP-like sensor domain (PAS domain) CheY-like 66
Mechanosensitive channel protein MscS (YggB), transmembrane region Mechanosensitive channel protein MscS (YggB), C-terminal domain 62
Nucleotidylyl transferase Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 65
Creatinase/prolidase N-terminal domain Creatinase/aminopeptidase 63
DNA ligase/mRNA capping enzyme, catalytic domain Nucleic acid-binding proteins 64
HAMP domain-like Methyl-accepting chemotaxis protein (MCP) signaling domain 63
HlyD-like secretion proteins HlyD-like secretion proteins 63
"Winged helix" DNA-binding domain NagB/RpiA/CoA transferase-like 61
Lysozyme-like beta-lactamase/transpeptidase-like 54
FAD-linked reductases, C-terminal domain Folate-binding domain 51
P-loop containing nucleoside triphosphate hydrolases Ribosomal protein S5 domain 2-like 55
GroEL equatorial domain-like GroEL-intermediate domain like 51
GroEL equatorial domain-like GroEL apical domain-like 51
P-loop containing nucleoside triphosphate hydrolases Hypothetical protein YjiA, C-terminal domain 51
"Winged helix" DNA-binding domain Actin-like ATPase domain 53
MurD-like peptide ligases, catalytic domain MurD-like peptide ligases, peptide-binding domain 53
GroEL-intermediate domain like GroEL apical domain-like 51
"Winged helix" DNA-binding domain PLP-dependent transferases 52
Ferredoxin reductase-like, C-terminal NADP-linked domain 2Fe-2S ferredoxin-like 52
Cytochrome c Cytochrome c 52
C-terminal effector domain of the bipartite response regulators TPR-like 54
FAD-binding/transporter-associated domain-like CO dehydrogenase flavoprotein C-terminal domain-like 52
TPR-like TPR-like 55
Calcium ATPase, transmembrane domain M HAD-like 55
PYP-like sensor domain (PAS domain) EAL domain-like 53
Calcium ATPase, transduction domain A HAD-like 55
Single hybrid motif Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 53
PGBD-like L,D-transpeptidase catalytic domain-like 53
Calcium ATPase, transduction domain A Calcium ATPase, transmembrane domain M 55
Riboflavin synthase domain-like 2Fe-2S ferredoxin-like 52
FAD-linked reductases, C-terminal domain Aminomethyltransferase beta-barrel domain 51
Cupredoxins Cupredoxins 55
P-loop containing nucleoside triphosphate hydrolases EF-G C-terminal domain-like 55
P-loop containing nucleoside triphosphate hydrolases EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 53
PYP-like sensor domain (PAS domain) Nucleotide cyclase 53
Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases 52
Translation proteins EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 53
FAD/NAD(P)-binding domain FAD/NAD(P)-binding domain 53
Lysozyme-like PGBD-like 42
Single hybrid motif CoA-dependent acyltransferases 42
MoeA N-terminal region -like MoeA C-terminal domain-like 42
HAMP domain-like Homodimeric domain of signal transducing histidine kinase 44
HAMP domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 44
ACT-like ACT-like 43
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex CoA-dependent acyltransferases 42
P-loop containing nucleoside triphosphate hydrolases TPR-like 44
Nucleic acid-binding proteins Nucleic acid-binding proteins 44
Alpha-L RNA-binding motif Pseudouridine synthase 42
HMA, heavy metal-associated domain Calcium ATPase, transmembrane domain M 44
PYP-like sensor domain (PAS domain) GAF domain-like 44
NAD(P)-binding Rossmann-fold domains LDH C-terminal domain-like 42
MalF N-terminal region-like MetI-like 41
GAF domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 44
CheY-like CheY-like 44
EF-G C-terminal domain-like EF-G C-terminal domain-like 44
Phospholipase D/nuclease Phospholipase D/nuclease 44
Regulatory protein AraC Homeodomain-like 42
Molybdenum cofactor biosynthesis proteins MoeA C-terminal domain-like 42
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Ribosomal protein S5 domain 2-like 44
PLP-binding barrel Alanine racemase C-terminal domain-like 41
RmlC-like cupins Homeodomain-like 42
HMA, heavy metal-associated domain HAD-like 44
Nucleotide cyclase P-loop containing nucleoside triphosphate hydrolases 44
ACT-like Formyltransferase 41
HMA, heavy metal-associated domain Calcium ATPase, transduction domain A 44
E set domains (Trans)glycosidases 43
MoeA N-terminal region -like Molybdenum cofactor biosynthesis proteins 42
Methylesterase CheB, C-terminal domain Chemotaxis receptor methyltransferase CheR, N-terminal domain 33
FKBP-like Triger factor/SurA peptide-binding domain-like 33
Class II aaRS and biotin synthetases Class II aaRS ABD-related 33
Rudiment single hybrid motif Single hybrid motif 32
Phosphoglucomutase, first 3 domains Phosphoglucomutase, first 3 domains 31
Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like 32
CBS-domain pair FAD-binding/transporter-associated domain-like 31
HSP40/DnaJ peptide-binding domain HSP40/DnaJ peptide-binding domain 33
Sigma3 and sigma4 domains of RNA polymerase sigma factors NagB/RpiA/CoA transferase-like 32
P-loop containing nucleoside triphosphate hydrolases Class I glutamine amidotransferase-like 31
4Fe-4S ferredoxins Formate dehydrogenase/DMSO reductase, domains 1-3 32
Translation proteins EF-G C-terminal domain-like 33
EF-G C-terminal domain-like Ribosomal protein S5 domain 2-like 33
2Fe-2S ferredoxin-like Formate dehydrogenase/DMSO reductase, domains 1-3 32
Nqo1 FMN-binding domain-like Nqo1C-terminal domain-like 32
Methylated DNA-protein cysteine methyltransferase domain Methylated DNA-protein cysteine methyltransferase, C-terminal domain 33
P-loop containing nucleoside triphosphate hydrolases post-AAA+ oligomerization domain-like 32
Nitrite/Sulfite reductase N-terminal domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 32
ValRS/IleRS/LeuRS editing domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 33
P-loop containing nucleoside triphosphate hydrolases "Winged helix" DNA-binding domain 32
"Winged helix" DNA-binding domain "Winged helix" DNA-binding domain 32
Chemotaxis receptor methyltransferase CheR, N-terminal domain S-adenosyl-L-methionine-dependent methyltransferases 33
ParB/Sulfiredoxin KorB DNA-binding domain-like 31
Phosphoglucomutase, first 3 domains Phosphoglucomutase, C-terminal domain 31
E set domains Glycosyl hydrolase domain 32
PDZ domain-like PDZ domain-like 32
Nqo1 FMN-binding domain-like Nqo1 middle domain-like 32
PreATP-grasp domain Single hybrid motif 32
Nqo1 middle domain-like Nqo1C-terminal domain-like 32
L30e-like alpha/beta knot 31
Glutathione synthetase ATP-binding domain-like Single hybrid motif 32
TPR-like S-adenosyl-L-methionine-dependent methyltransferases 32
Nucleic acid-binding proteins RuvA domain 2-like 33
FMN-linked oxidoreductases FAD/NAD(P)-binding domain 32
GroES-like GroES-like 32
ValRS/IleRS/LeuRS editing domain Nucleotidylyl transferase 33
Trypsin-like serine proteases PDZ domain-like 32
Chaperone J-domain HSP40/DnaJ peptide-binding domain 33
S-adenosyl-L-methionine-dependent methyltransferases PYP-like sensor domain (PAS domain) 33
TrkA C-terminal domain-like TrkA C-terminal domain-like 32
NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains 33
GAF domain-like Nucleotide cyclase 32
Nucleic acid-binding proteins Class II aaRS and biotin synthetases 33
2Fe-2S ferredoxin-like 4Fe-4S ferredoxins 32
TolB, N-terminal domain TPR-like 32
SAM/Pointed domain Nucleotide cyclase 22
CO dehydrogenase ISP C-domain like FAD-binding/transporter-associated domain-like 21
2Fe-2S ferredoxin-like ADC-like 21
Tubulin nucleotide-binding domain-like Tubulin C-terminal domain-like 22
PurM N-terminal domain-like PurM C-terminal domain-like 22
Nucleotidyltransferase ACT-like 22
PDZ domain-like ClpP/crotonase 22
NAD(P)-binding Rossmann-fold domains Succinyl-CoA synthetase domains 22
N-utilization substance G protein NusG, N-terminal domain Translation proteins SH3-like domain 22
CoA-dependent acyltransferases CoA-dependent acyltransferases 22
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Adenine nucleotide alpha hydrolases-like 21
Sensory domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 22
Aminoacid dehydrogenase-like, N-terminal domain Isocitrate/Isopropylmalate dehydrogenase-like 21
NAD(P)-binding Rossmann-fold domains Isocitrate/Isopropylmalate dehydrogenase-like 21
lambda integrase-like, N-terminal domain DNA breaking-rejoining enzymes 22
2Fe-2S ferredoxin-like CO dehydrogenase flavoprotein C-terminal domain-like 21
SAM/Pointed domain TPR-like 22
Multiheme cytochromes TPR-like 22
ISP domain Bet v1-like 21
MetI-like P-loop containing nucleoside triphosphate hydrolases 22
Nicotinate/Quinolinate PRTase N-terminal domain-like Nicotinate/Quinolinate PRTase C-terminal domain-like 21
Histidine-containing phosphotransfer domain, HPT domain ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 22
beta-Galactosidase/glucuronidase domain (Trans)glycosidases 22
CO dehydrogenase ISP C-domain like CO dehydrogenase flavoprotein C-terminal domain-like 21
NAD(P)-binding Rossmann-fold domains UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 21
alpha-helical ferredoxin Nucleotide-binding domain 22
6-phosphogluconate dehydrogenase C-terminal domain-like UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 21
RuBisCO, large subunit, small (N-terminal) domain RuBisCo, C-terminal domain 21
Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 21
Protein kinase-like (PK-like) PLP-dependent transferases 22
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 21
ClpP/crotonase ClpP/crotonase 21
GAF domain-like P-loop containing nucleoside triphosphate hydrolases 22
Phosphohistidine domain Phosphoenolpyruvate/pyruvate domain 22
NAD(P)-binding Rossmann-fold domains Tetrapyrrole methylase 21
4Fe-4S ferredoxins ADC-like 21
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheW-like 22
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 21
Acetyl-CoA synthetase-like Acetyl-CoA synthetase-like 22
Macro domain-like Zn-dependent exopeptidases 21
FAD/NAD(P)-binding domain HI0933 insert domain-like 21
Nucleic acid-binding proteins P-loop containing nucleoside triphosphate hydrolases 22
Histidine-containing phosphotransfer domain, HPT domain CheW-like 22
Galactose-binding domain-like beta-Galactosidase/glucuronidase domain 22
Penicillin binding protein dimerisation domain beta-lactamase/transpeptidase-like 21
Cupredoxins Cytochrome c 21
ACP-like ACP-like 22
Acetyl-CoA synthetase-like ACP-like 22
Homeodomain-like NagB/RpiA/CoA transferase-like 22
lambda repressor-like DNA-binding domains LexA/Signal peptidase 21
Type II DNA topoisomerase GyrA/ParC C-terminal domain-like 22
Ribosomal protein S5 domain 2-like Type II DNA topoisomerase 22
6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 22
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 21
N-terminal nucleophile aminohydrolases (Ntn hydrolases) SIS domain 21
Nucleotide cyclase TolB, N-terminal domain 21
Metalloproteases ("zincins"), catalytic domain beta-Roll 22
FabD/lysophospholipase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 22
CoA-dependent acyltransferases ACP-like 22
Nucleotidyltransferase Nucleotidyltransferase substrate binding subunit/domain 22
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 22
Sigma3 and sigma4 domains of RNA polymerase sigma factors CheY-like 21
Aconitase iron-sulfur domain LeuD/IlvD-like 21
NAD(P)-binding Rossmann-fold domains ACT-like 22
PLP-dependent transferases Ornithine decarboxylase C-terminal domain 21
GAF domain-like Homeodomain-like 22
Methylesterase CheB, C-terminal domain PYP-like sensor domain (PAS domain) 22
Aldolase post-HMGL domain-like 22
MurCD N-terminal domain MurD-like peptide ligases, catalytic domain 21
Translation proteins ThrRS/AlaRS common domain 22
Galactose-binding domain-like (Trans)glycosidases 22
NAD(P)-binding Rossmann-fold domains Siroheme synthase middle domains-like 21
Methylesterase CheB, C-terminal domain S-adenosyl-L-methionine-dependent methyltransferases 22
Succinyl-CoA synthetase domains Glutathione synthetase ATP-binding domain-like 22
CheY-like Methylesterase CheB, C-terminal domain 21
Adenine nucleotide alpha hydrolases-like DHS-like NAD/FAD-binding domain 21
Rhodanese/Cell cycle control phosphatase Rhodanese/Cell cycle control phosphatase 21
Galactose mutarotase-like Six-hairpin glycosidases 22
SAM/Pointed domain P-loop containing nucleoside triphosphate hydrolases 22
Double Clp-N motif P-loop containing nucleoside triphosphate hydrolases 22
Methionine synthase domain Cobalamin (vitamin B12)-binding domain 22
MurE/MurF N-terminal domain MurD-like peptide ligases, catalytic domain 21
Cytochrome c oxidase subunit II-like, transmembrane region Cupredoxins 22
P-loop containing nucleoside triphosphate hydrolases Restriction endonuclease-like 22
DnaK suppressor protein DksA, alpha-hairpin domain Glucocorticoid receptor-like (DNA-binding domain) 21
Nitrite and sulphite reductase 4Fe-4S domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 21
P-loop containing nucleoside triphosphate hydrolases CBS-domain pair 21
CoA-dependent acyltransferases Acetyl-CoA synthetase-like 22
Chemotaxis receptor methyltransferase CheR, N-terminal domain PYP-like sensor domain (PAS domain) 22
2Fe-2S ferredoxin-like FAD-binding/transporter-associated domain-like 21
tRNA-binding arm Class II aaRS and biotin synthetases 21
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Type II DNA topoisomerase 22
Galactose mutarotase-like Galactose mutarotase-like 22
AraD/HMP-PK domain-like NAD(P)-binding Rossmann-fold domains 21
HAMP domain-like PYP-like sensor domain (PAS domain) 22
N-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase 21
Aspartate/glutamate racemase Aspartate/glutamate racemase 21
DNA/RNA polymerases Lesion bypass DNA polymerase (Y-family), little finger domain 22
CheY-like Nucleotide cyclase 22
MurCD N-terminal domain MurD-like peptide ligases, peptide-binding domain 21
Aldolase 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 22
Siroheme synthase middle domains-like Tetrapyrrole methylase 21
Nucleic acid-binding proteins Translation proteins SH3-like domain 22
Oxidoreductase molybdopterin-binding domain E set domains 22
Sensory domain-like Homodimeric domain of signal transducing histidine kinase 22
P-loop containing nucleoside triphosphate hydrolases C-terminal domain of alpha and beta subunits of F1 ATP synthase 21
Nucleotide-diphospho-sugar transferases Trimeric LpxA-like enzymes 21
Nitrite/Sulfite reductase N-terminal domain-like Nitrite/Sulfite reductase N-terminal domain-like 21
Formyltransferase FMT C-terminal domain-like 21
Nucleotidyltransferase Poly A polymerase C-terminal region-like 22
Ribosomal protein S5 domain 2-like Ribonuclease PH domain 2-like 22
MurE/MurF N-terminal domain MurD-like peptide ligases, peptide-binding domain 21
ThrRS/AlaRS common domain Class II aaRS and biotin synthetases 22
P-loop containing nucleoside triphosphate hydrolases FtsH protease domain-like 22
N-terminal domain of alpha and beta subunits of F1 ATP synthase P-loop containing nucleoside triphosphate hydrolases 21
FMN-binding split barrel UbiD C-terminal domain-like 21
PreATP-grasp domain Methylglyoxal synthase-like 11
Sigma3 and sigma4 domains of RNA polymerase sigma factors DAK1/DegV-like 11
Insert subdomain of RNA polymerase alpha subunit RBP11-like subunits of RNA polymerase 11
Nucleic acid-binding proteins GAD domain-like 11
Molybdenum cofactor biosynthesis proteins Periplasmic binding protein-like II 11
P-loop containing nucleoside triphosphate hydrolases Prokaryotic type KH domain (KH-domain type II) 11
Nucleic acid-binding proteins ArfGap/RecO-like zinc finger 11
Glutamine synthetase/guanido kinase GatB/YqeY motif 11
Carbamate kinase-like ACT-like 11
Nucleotidyltransferase TGS-like 11
dsRNA-binding domain-like Ribosomal protein S5 domain 2-like 11
FabD/lysophospholipase-like NAD(P)-binding Rossmann-fold domains 11
alpha/beta-Hydrolases alpha/beta-Hydrolases 11
PurM C-terminal domain-like PurM C-terminal domain-like 11
Glutathione synthetase ATP-binding domain-like Phosphoenolpyruvate/pyruvate domain 11
NagB/RpiA/CoA transferase-like D-ribose-5-phosphate isomerase (RpiA), lid domain 11
L9 N-domain-like Ribosomal protein L9 C-domain 11
alpha/beta-Hydrolases Galactose-binding domain-like 11
P-loop containing nucleoside triphosphate hydrolases Homodimeric domain of signal transducing histidine kinase 11
Protein kinase-like (PK-like) Duplicated hybrid motif 11
Alpha-L RNA-binding motif S-adenosyl-L-methionine-dependent methyltransferases 11
ParB/Sulfiredoxin S-adenosyl-L-methionine-dependent methyltransferases 11
MoeA N-terminal region -like Periplasmic binding protein-like II 11
FMN-linked oxidoreductases 4Fe-4S ferredoxins 11
PGBD-like PGBD-like 11
Metal cation-transporting ATPase, ATP-binding domain N Calcium ATPase, transmembrane domain M 11
PheT/TilS domain Class II aaRS and biotin synthetases 11
Thioredoxin-like Thioredoxin-like 11
vWA-like TPR-like 11
PLP-dependent transferases PLP-dependent transferases 11
beta-Roll Concanavalin A-like lectins/glucanases 11
Tetrapyrrole methylase S-adenosyl-L-methionine-dependent methyltransferases 11
Pre-protein crosslinking domain of SecA Helical scaffold and wing domains of SecA 11
Translation proteins Ribosomal protein S5 domain 2-like 11
ISP domain Riboflavin synthase domain-like 11
Nucleotide-diphospho-sugar transferases PilZ domain-like 11
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Pyrimidine nucleoside phosphorylase C-terminal domain 11
Ribosomal protein S5 domain 2-like DNA mismatch repair protein MutL 11
C-terminal effector domain of the bipartite response regulators TolB, N-terminal domain 11
Sigma2 domain of RNA polymerase sigma factors NTF2-like 11
Adhesin YadA, collagen-binding domain Adhesin YadA, collagen-binding domain 11
PheT/TilS domain Putative DNA-binding domain 11
WD40 repeat-like Cytochrome c 11
Homocysteine S-methyltransferase Methionine synthase activation domain-like 11
DNA ligase/mRNA capping enzyme, catalytic domain RuvA domain 2-like 11
AGR C 984p-like AGR C 984p-like 11
ThrRS/AlaRS common domain Class II aaRS ABD-related 11
Adenine nucleotide alpha hydrolases-like Argininosuccinate synthetase, C-terminal domain 11
Cytochrome c oxidase subunit I-like Cytochrome c oxidase subunit III-like 11
RuvA domain 2-like DNA helicase RuvA subunit, C-terminal domain 11
TolB, N-terminal domain Tricorn protease N-terminal domain 11
Hypothetical protein SAV1430 Fe-S cluster assembly (FSCA) domain-like 11
ALDH-like Thioesterase/thiol ester dehydrase-isomerase 11
Cation efflux protein transmembrane domain-like Cation efflux protein cytoplasmic domain-like 11
Translation proteins Initiation factor IF2/eIF5b, domain 3 11
5' to 3' exonuclease, C-terminal subdomain DNA/RNA polymerases 11
NagB/RpiA/CoA transferase-like DAK1/DegV-like 11
Nucleic acid-binding proteins BRCT domain 11
Nucleotidylyl transferase Alpha-L RNA-binding motif 11
NAD(P)-binding Rossmann-fold domains TrkA C-terminal domain-like 11
Ribosomal protein S5 domain 2-like GHMP Kinase, C-terminal domain 11
P-loop containing nucleoside triphosphate hydrolases Signal peptide-binding domain 11
Fumarate reductase respiratory complex transmembrane subunits Nucleotide cyclase 11
Nucleic acid-binding proteins Putative DNA-binding domain 11
MgtE N-terminal domain-like CBS-domain pair 11
Class I glutamine amidotransferase-like Adenine nucleotide alpha hydrolases-like 11
DNA-glycosylase Nudix 11
Ribosomal protein S5 domain 2-like HSP90 C-terminal domain 11
Zinc beta-ribbon DNA primase core 11
Integrin alpha N-terminal domain Integrin alpha N-terminal domain 11
Probable ACP-binding domain of malonyl-CoA ACP transacylase GroES-like 11
UDP-Glycosyltransferase/glycogen phosphorylase (Trans)glycosidases 11
Dihydropteroate synthetase-like Methionine synthase activation domain-like 11
Nucleotidyltransferase substrate binding subunit/domain Nucleotidyltransferase substrate binding subunit/domain 11
Riboflavin synthase domain-like Riboflavin synthase domain-like 11
Nucleic acid-binding proteins S-adenosyl-L-methionine-dependent methyltransferases 11
NAD(P)-binding Rossmann-fold domains Glutathione synthetase ATP-binding domain-like 11
Class II aaRS and biotin synthetases C-terminal domain of transcriptional repressors 11
DNA repair protein MutS, domain II P-loop containing nucleoside triphosphate hydrolases 11
Ribonuclease H-like DNA/RNA polymerases 11
Succinyl-CoA synthetase domains Succinyl-CoA synthetase domains 11
CBS-domain pair MgtE membrane domain-like 11
C-terminal UvrC-binding domain of UvrB RuvA domain 2-like 11
Methylesterase CheB, C-terminal domain ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
ClpP/crotonase 6-phosphogluconate dehydrogenase C-terminal domain-like 11
Ribonuclease H-like Nucleic acid-binding proteins 11
2Fe-2S ferredoxin-like alpha-helical ferredoxin 11
PK beta-barrel domain-like PK C-terminal domain-like 11
P-loop containing nucleoside triphosphate hydrolases RecA protein, C-terminal domain 11
PIN domain-like Ribonuclease H-like 11
Nucleotide-binding domain Nucleotide-binding domain 11
Nucleotidyltransferase substrate binding subunit/domain Poly A polymerase C-terminal region-like 11
PPK N-terminal domain-like Phospholipase D/nuclease 11
UBA-like Elongation factor Ts (EF-Ts), dimerisation domain 11
Thioredoxin-like Nqo1 FMN-binding domain-like 11
Kazal-type serine protease inhibitors Kazal-type serine protease inhibitors 11
Heme-dependent catalase-like Class I glutamine amidotransferase-like 11
Metallo-hydrolase/oxidoreductase SCP-like 11
S-adenosyl-L-methionine-dependent methyltransferases EreA/ChaN-like 11
Adenine nucleotide alpha hydrolases-like GMP synthetase C-terminal dimerisation domain 11
Rho N-terminal domain-like Nucleic acid-binding proteins 11
HD-domain/PDEase-like TGS-like 11
RuvA domain 2-like JAB1/MPN domain 11
Histidine-containing phosphotransfer domain, HPT domain CheY-like 11
Rhodanese/Cell cycle control phosphatase Multiheme cytochromes 11
Single hybrid motif Thiamin diphosphate-binding fold (THDP-binding) 11
Diaminopimelate epimerase-like Diaminopimelate epimerase-like 11
Transcription factor NusA, N-terminal domain Prokaryotic type KH domain (KH-domain type II) 11
Homocysteine S-methyltransferase Dihydropteroate synthetase-like 11
Nucleic acid-binding proteins DNA helicase RuvA subunit, C-terminal domain 11
Globin-like Riboflavin synthase domain-like 11
UDP-Glycosyltransferase/glycogen phosphorylase Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 11
FabD/lysophospholipase-like ACP-like 11
Formate/glycerate dehydrogenase catalytic domain-like Serine metabolism enzymes domain 11
Nucleic acid-binding proteins Rad51 N-terminal domain-like 11
RuvA domain 2-like RuvA domain 2-like 11
Ribonuclease PH domain 2-like Nucleic acid-binding proteins 11
Chemotaxis receptor methyltransferase CheR, N-terminal domain ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Urease metallochaperone UreE, N-terminal domain Urease metallochaperone UreE, C-terminal domain 11
Glutathione synthetase ATP-binding domain-like post-HMGL domain-like 11
Glutathione synthetase ATP-binding domain-like Glutathione synthetase ATP-binding domain-like 11
Adenine nucleotide alpha hydrolases-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
TPR-like Porins 11
FMN-linked oxidoreductases Nucleotide-binding domain 11
Sensory domain-like Methyl-accepting chemotaxis protein (MCP) signaling domain 11
Nucleic acid-binding proteins Prokaryotic type KH domain (KH-domain type II) 11
Putative DNA-binding domain lambda repressor-like DNA-binding domains 11
Actin-like ATPase domain HD-domain/PDEase-like 11
UDP-Glycosyltransferase/glycogen phosphorylase Nucleotide-binding domain 11
Serine metabolism enzymes domain ACT-like 11
Nucleotidylyl transferase An anticodon-binding domain of class I aminoacyl-tRNA synthetases 11
FAD-linked reductases, C-terminal domain 4Fe-4S ferredoxins 11
YhbC-like, N-terminal domain YhbC-like, C-terminal domain 11
Phosphoenolpyruvate/pyruvate domain PK C-terminal domain-like 11
MgtE N-terminal domain-like MgtE membrane domain-like 11
Ribosomal protein S5 domain 2-like Nucleic acid-binding proteins 11
Probable ACP-binding domain of malonyl-CoA ACP transacylase ACP-like 11
Cobalamin (vitamin B12)-dependent enzymes Cobalamin (vitamin B12)-binding domain 11
S-adenosyl-L-methionine-dependent methyltransferases Putative methyltransferase TM0872, insert domain 11
RNase III domain-like dsRNA-binding domain-like 11
Fumarate reductase respiratory complex transmembrane subunits 2Fe-2S ferredoxin-like 11
Duplicated hybrid motif PLP-dependent transferases 11
Class II aaRS and biotin synthetases Anticodon-binding domain of PheRS 11
P-loop containing nucleoside triphosphate hydrolases ACT-like 11
FAD-binding/transporter-associated domain-like Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
FAD/NAD(P)-binding domain Nitrite/Sulfite reductase N-terminal domain-like 11
P-loop containing nucleoside triphosphate hydrolases Initiation factor IF2/eIF5b, domain 3 11
S-adenosyl-L-methionine-dependent methyltransferases BAR/IMD domain-like 11
Aminopeptidase/glucanase lid domain Zn-dependent exopeptidases 11
PreATP-grasp domain Carbamoyl phosphate synthetase, large subunit connection domain 11
Class II aaRS and biotin synthetases Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) 11
HD-domain/PDEase-like Nucleotidyltransferase 11
RuvA domain 2-like BRCT domain 11
HAMP domain-like CheY-like 11
Thioesterase/thiol ester dehydrase-isomerase Thioesterase/thiol ester dehydrase-isomerase 11
post-HMGL domain-like Single hybrid motif 11
NAD(P)-binding Rossmann-fold domains Thioesterase/thiol ester dehydrase-isomerase 11
NagB/RpiA/CoA transferase-like NagB/RpiA/CoA transferase-like 11
Ribonuclease PH domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
S13-like H2TH domain Glucocorticoid receptor-like (DNA-binding domain) 11
Insert subdomain of RNA polymerase alpha subunit C-terminal domain of RNA polymerase alpha subunit 11
Sigma3 and sigma4 domains of RNA polymerase sigma factors TPR-like 11
YlxR-like L30e-like 11
2Fe-2S ferredoxin-like Nucleotide cyclase 11
beta-lactamase/transpeptidase-like Penicillin-binding protein associated domain 11
FAD/NAD(P)-binding domain 4Fe-4S ferredoxins 11
FliG FliG 11
"Winged helix" DNA-binding domain S-adenosyl-L-methionine-dependent methyltransferases 11
PK beta-barrel domain-like Phosphoenolpyruvate/pyruvate domain 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase HSP90 C-terminal domain 11
DNA topoisomerase I domain DNA breaking-rejoining enzymes 11
Prokaryotic type KH domain (KH-domain type II) Prokaryotic type KH domain (KH-domain type II) 11
Domain of the SRP/SRP receptor G-proteins P-loop containing nucleoside triphosphate hydrolases 11
Chemotaxis receptor methyltransferase CheR, N-terminal domain BAR/IMD domain-like 11
MFS general substrate transporter MFS general substrate transporter 11
beta-sandwich domain of Sec23/24 Autotransporter 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Nucleotidylyl transferase 11
DNA repair protein MutS, domain II DNA repair protein MutS, domain III 11
P-loop containing nucleoside triphosphate hydrolases C-terminal UvrC-binding domain of UvrB 11
Globin-like Ferredoxin reductase-like, C-terminal NADP-linked domain 11
Thiolase-like ACP-like 11
Tex N-terminal region-like Nucleic acid-binding proteins 11
PPK N-terminal domain-like PHP14-like 11
Ribosomal protein L7/12, oligomerisation (N-terminal) domain ClpS-like 11
ClpP/crotonase NfeD domain-like 11
Ribonuclease H-like HRDC-like 11
Single hybrid motif alpha/beta-Hydrolases 11
Formyltransferase CoA-dependent acyltransferases 11
Dihydropteroate synthetase-like Methionine synthase domain 11
Restriction endonuclease-like Restriction endonuclease-like 11
Glutathione synthetase ATP-binding domain-like Carbamoyl phosphate synthetase, large subunit connection domain 11
P-loop containing nucleoside triphosphate hydrolases HRDC-like 11
Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 11
CarD-like TRCF domain-like 11
post-HMGL domain-like 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 11
TGS-like ThrRS/AlaRS common domain 11
TrmE connector domain P-loop containing nucleoside triphosphate hydrolases 11
Periplasmic binding protein-like II Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain 11
PreATP-grasp domain post-HMGL domain-like 11
Putative DNA-binding domain RmlC-like cupins 11
Glutathione synthetase ATP-binding domain-like Phosphohistidine domain 11
Homocysteine S-methyltransferase Cobalamin (vitamin B12)-binding domain 11
Rhodanese/Cell cycle control phosphatase Activating enzymes of the ubiquitin-like proteins 11
Tex N-terminal region-like RuvA domain 2-like 11
Prokaryotic type KH domain (KH-domain type II) Rad51 N-terminal domain-like 11
Ada DNA repair protein, N-terminal domain (N-Ada 10) Methylated DNA-protein cysteine methyltransferase, C-terminal domain 11
PIN domain-like DNA/RNA polymerases 11
Thiolase-like NAD(P)-binding Rossmann-fold domains 11
Formate/glycerate dehydrogenase catalytic domain-like ACT-like 11
Eukaryotic type KH-domain (KH-domain type I) Nucleic acid-binding proteins 11
Homeodomain-like Methylated DNA-protein cysteine methyltransferase, C-terminal domain 11
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphoenolpyruvate/pyruvate domain 11
P-loop containing nucleoside triphosphate hydrolases Pre-protein crosslinking domain of SecA 11
PreATP-grasp domain PreATP-grasp domain 11
beta-Galactosidase/glucuronidase domain beta-Galactosidase/glucuronidase domain 11
Nucleic acid-binding proteins PheT/TilS domain 11
HCP-like HCP-like 11
Carbamate kinase-like PUA domain-like 11
P-loop containing nucleoside triphosphate hydrolases Helical scaffold and wing domains of SecA 11
Leukotriene A4 hydrolase N-terminal domain Metalloproteases ("zincins"), catalytic domain 11
EAL domain-like CBS-domain pair 11
Sensory domain-like Nucleotide cyclase 11
Formyltransferase ACP-like 11
P-loop containing nucleoside triphosphate hydrolases Smc hinge domain 11
beta-lactamase/transpeptidase-like Sporulation related repeat 11
GAF domain-like EAL domain-like 11
NAD(P)-binding Rossmann-fold domains Sec-C motif 11
Globin-like Methyl-accepting chemotaxis protein (MCP) signaling domain 11
P-loop containing nucleoside triphosphate hydrolases TrpR-like 11
MOSC N-terminal domain-like PK beta-barrel domain-like 11
DeoB insert domain-like Alkaline phosphatase-like 11
Acetyl-CoA synthetase-like alpha/beta-Hydrolases 11
GAF domain-like Phosphohistidine domain 11
Nucleotidyltransferase Nucleotidyltransferase 11
YjeF N-terminal domain-like Ribokinase-like 11
FAD-linked oxidoreductase ALDH-like 11
Bacterial muramidases Lysozyme-like 11
NAD(P)-binding Rossmann-fold domains Serine metabolism enzymes domain 11
HMA, heavy metal-associated domain HMA, heavy metal-associated domain 11
Homocysteine S-methyltransferase Methionine synthase domain 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Alpha subunit of glutamate synthase, C-terminal domain 11
UDP-Glycosyltransferase/glycogen phosphorylase FAD-linked reductases, C-terminal domain 11
Ankyrin repeat Ankyrin repeat 11
Trigger factor ribosome-binding domain Triger factor/SurA peptide-binding domain-like 11
P-loop containing nucleoside triphosphate hydrolases CarD-like 11
Prokaryotic type I DNA topoisomerase Zinc beta-ribbon 11
PurM N-terminal domain-like PurM N-terminal domain-like 11
Putative DNA-binding domain Class II aaRS and biotin synthetases 11
DNA repair protein MutS, domain I P-loop containing nucleoside triphosphate hydrolases 11
4'-phosphopantetheinyl transferase 4'-phosphopantetheinyl transferase 11
Homodimeric domain of signal transducing histidine kinase Nucleotide cyclase 11
Thioredoxin-like Nqo1C-terminal domain-like 11
CheW-like CheY-like 11
Coiled-coil domain of nucleotide exchange factor GrpE Head domain of nucleotide exchange factor GrpE 11
YrdC/RibB RibA-like 11
ISP domain 2Fe-2S ferredoxin-like 11
Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain Pyrimidine nucleoside phosphorylase C-terminal domain 11
SH3-domain SH3-domain 11
S-adenosyl-L-methionine-dependent methyltransferases ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Thioredoxin-like TPR-like 11
Translation initiation factor IF3, N-terminal domain Translation initiation factor IF3, C-terminal domain 11
ClpP/crotonase NAD(P)-binding Rossmann-fold domains 11
N-acetylmuramoyl-L-alanine amidase-like PGBD-like 11
YebC-like PFL-like glycyl radical enzymes 11
DnaJ/Hsp40 cysteine-rich domain HSP40/DnaJ peptide-binding domain 11
Sigma3 and sigma4 domains of RNA polymerase sigma factors NTF2-like 11
Xylose isomerase-like Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 11
Heat shock protein 70kD (HSP70), peptide-binding domain Heat shock protein 70kD (HSP70), C-terminal subdomain 11
Thiolase-like FabD/lysophospholipase-like 11
FMN-linked oxidoreductases Alpha subunit of glutamate synthase, C-terminal domain 11
Adhesin YadA, collagen-binding domain Pili subunits 11
Carbamoyl phosphate synthetase, small subunit N-terminal domain Class I glutamine amidotransferase-like 11
CheY-like Purine and uridine phosphorylases 11
(Trans)glycosidases (Trans)glycosidases 11
Aldolase Single hybrid motif 11
TGS-like Class II aaRS ABD-related 11
Class I glutamine amidotransferase-like GMP synthetase C-terminal dimerisation domain 11
Thiolase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 11
ALDH-like ALDH-like 11
Cytidine deaminase-like Dihydrofolate reductase-like 11
BAR/IMD domain-like PYP-like sensor domain (PAS domain) 11
CorA soluble domain-like Magnesium transport protein CorA, transmembrane region 11
Radical SAM enzymes Nitrogenase accessory factor-like 11
E set domains E set domains 11
FAD/NAD(P)-binding domain Nitrite and sulphite reductase 4Fe-4S domain-like 11
Tex N-terminal region-like Ribonuclease H-like 11
Ada DNA repair protein, N-terminal domain (N-Ada 10) Methylated DNA-protein cysteine methyltransferase domain 11
Dihydropteroate synthetase-like Cobalamin (vitamin B12)-binding domain 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) FMN-linked oxidoreductases 11
FabD/lysophospholipase-like GroES-like 11
Single hybrid motif HlyD-like secretion proteins 11
Ribosomal protein L6 Ribosomal protein L6 11
Chaperone J-domain DnaJ/Hsp40 cysteine-rich domain 11
Homodimeric domain of signal transducing histidine kinase CheW-like 11
OmpA-like Prokaryotic lipoproteins and lipoprotein localization factors 11
NTF2-like Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 11
6-phosphogluconate dehydrogenase C-terminal domain-like Thioesterase/thiol ester dehydrase-isomerase 11
P-loop containing nucleoside triphosphate hydrolases TRCF domain-like 11
Poly A polymerase C-terminal region-like ACT-like 11
ARM repeat TPR-like 11
SH3-domain Cysteine proteinases 11
alpha-helical ferredoxin ARM repeat 11
Obg GTP-binding protein N-terminal domain P-loop containing nucleoside triphosphate hydrolases 11
all-alpha NTP pyrophosphatases all-alpha NTP pyrophosphatases 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) ThrRS/AlaRS common domain 11
alpha/beta-Hydrolases OsmC-like 11
Acyl-CoA N-acyltransferases (Nat) Glutathione synthetase ATP-binding domain-like 11
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase alpha/beta-Hydrolases 11
FAD/NAD(P)-binding domain ISP domain 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase DNA mismatch repair protein MutL 11
UDP-Glycosyltransferase/glycogen phosphorylase GroES-like 11
Metallo-dependent phosphatases 5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain 11
ADC synthase Class I glutamine amidotransferase-like 11
Nucleotide-diphospho-sugar transferases RmlC-like cupins 11
Elongation factor Ts (EF-Ts), dimerisation domain Elongation factor Ts (EF-Ts), dimerisation domain 11
UDP-Glycosyltransferase/glycogen phosphorylase NAD(P)-binding Rossmann-fold domains 11
Calcium ATPase, transduction domain A Metal cation-transporting ATPase, ATP-binding domain N 11
Rho N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 11
AhpD-like RmlC-like cupins 11
NAD(P)-binding Rossmann-fold domains NAD(P)-linked oxidoreductase 11
MFS general substrate transporter Sm-like ribonucleoproteins 11
Translation proteins Translation proteins 11
RBP11-like subunits of RNA polymerase C-terminal domain of RNA polymerase alpha subunit 11
N-terminal domain of bifunctional PutA protein FAD-linked oxidoreductase 11
PUA domain-like alpha/beta knot 11
HD-domain/PDEase-like ACT-like 11
TGS-like Class II aaRS and biotin synthetases 11
PIN domain-like 5' to 3' exonuclease, C-terminal subdomain 11
Molybdenum cofactor-binding domain Molybdenum cofactor-binding domain 11
"Winged helix" DNA-binding domain LexA/Signal peptidase 11
Nucleic acid-binding proteins Anticodon-binding domain of PheRS 11
Molybdenum cofactor biosynthesis proteins Nucleotide-diphospho-sugar transferases 11
Metal cation-transporting ATPase, ATP-binding domain N HAD-like 11
ISP domain Ferredoxin reductase-like, C-terminal NADP-linked domain 11
DAK1/DegV-like DhaL-like 11
Nucleotide-diphospho-sugar transferases TPR-like 11
Nucleotidylyl transferase Riboflavin kinase-like 11
HRDC-like HRDC-like 11
PUA domain-like Ribosomal protein S5 domain 2-like 11
Multiheme cytochromes ARM repeat 11
Rudiment single hybrid motif Aldolase 11
GIY-YIG endonuclease RuvA domain 2-like 11
Peptidase/esterase 'gauge' domain alpha/beta-Hydrolases 11
DNA ligase/mRNA capping enzyme, catalytic domain BRCT domain 11
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex alpha/beta-Hydrolases 11
Homeodomain-like Probable bacterial effector-binding domain 11
Carbon-nitrogen hydrolase Adenine nucleotide alpha hydrolases-like 11
P-loop containing nucleoside triphosphate hydrolases Adenine nucleotide alpha hydrolases-like 11
Histidine-containing phosphotransfer domain, HPT domain Homodimeric domain of signal transducing histidine kinase 11
Class II aaRS and biotin synthetases GAD domain-like 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain III 11
Trigger factor ribosome-binding domain FKBP-like 11
Methylglyoxal synthase-like Cytidine deaminase-like 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain ACT-like 11
GAF domain-like Calcium-dependent phosphotriesterase 11
Fe,Mn superoxide dismutase (SOD), N-terminal domain Fe,Mn superoxide dismutase (SOD), C-terminal domain 11
GroES-like ACP-like 11
Nucleotide-diphospho-sugar transferases UDP-Glycosyltransferase/glycogen phosphorylase 11
Homeodomain-like Methylated DNA-protein cysteine methyltransferase domain 11
LysM domain LysM domain 11
Translation proteins PRC-barrel domain 11
Pectin lyase-like beta-sandwich domain of Sec23/24 11
Putative DNA-binding domain Anticodon-binding domain of PheRS 11
DNA clamp DNA clamp 11
Pectin lyase-like Autotransporter 11
CBS-domain pair Nucleotide cyclase 11
dUTPase-like dUTPase-like 11
P-loop containing nucleoside triphosphate hydrolases ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
ValRS/IleRS/LeuRS editing domain tRNA-binding arm 11
AF0104/ALDC/Ptd012-like AF0104/ALDC/Ptd012-like 11
Glucocorticoid receptor-like (DNA-binding domain) P-loop containing nucleoside triphosphate hydrolases 11
Nudix "Winged helix" DNA-binding domain 11
CoA-dependent acyltransferases alpha/beta-Hydrolases 11
N-terminal domain of MutM-like DNA repair proteins Glucocorticoid receptor-like (DNA-binding domain) 11
Actin-like ATPase domain Heat shock protein 70kD (HSP70), peptide-binding domain 11
Actin-like ATPase domain Heat shock protein 70kD (HSP70), C-terminal subdomain 11
Sensory domain-like HAMP domain-like 11
(Trans)glycosidases Class I glutamine amidotransferase-like 11
P-loop containing nucleoside triphosphate hydrolases Protein kinase-like (PK-like) 11
NAD(P)-binding Rossmann-fold domains 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
S-adenosylmethionine synthetase S-adenosylmethionine synthetase 11
Nucleotide-binding domain FAD-linked reductases, C-terminal domain 11
Fe-S cluster assembly (FSCA) domain-like P-loop containing nucleoside triphosphate hydrolases 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases tRNA-binding arm 11
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphohistidine domain 11
beta-N-acetylhexosaminidase-like domain (Trans)glycosidases 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain NAD(P)-linked oxidoreductase 11
PYP-like sensor domain (PAS domain) Methyl-accepting chemotaxis protein (MCP) signaling domain 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain II 11
Methylesterase CheB, C-terminal domain BAR/IMD domain-like 11
"Winged helix" DNA-binding domain Calcium-dependent phosphotriesterase 11
Transcription factor NusA, N-terminal domain Rad51 N-terminal domain-like 11
NusB-like S-adenosyl-L-methionine-dependent methyltransferases 11
CBS-domain pair Inosine monophosphate dehydrogenase (IMPDH) 11
C-terminal effector domain of the bipartite response regulators P-loop containing nucleoside triphosphate hydrolases 11
Periplasmic binding protein-like II ACT-like 11
Probable ACP-binding domain of malonyl-CoA ACP transacylase NAD(P)-binding Rossmann-fold domains 11
Rudiment single hybrid motif post-HMGL domain-like 11
GAF domain-like Phosphoenolpyruvate/pyruvate domain 11
N-terminal domain of DnaB helicase P-loop containing nucleoside triphosphate hydrolases 11
Ribosomal protein S5 domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
Glutathione synthetase ATP-binding domain-like Methylglyoxal synthase-like 11
Ribosomal L11/L12e N-terminal domain Ribosomal protein L11, C-terminal domain 11
PEP carboxykinase N-terminal domain PEP carboxykinase-like 11
Thiolase-like GroES-like 11
Thioredoxin-like Nqo1 middle domain-like 11
TerB-like Chaperone J-domain 11
alpha/beta-Hydrolases Nucleotide cyclase 11
Adenine nucleotide alpha hydrolases-like Homodimeric domain of signal transducing histidine kinase 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain GroES-like 11
PHP domain-like AF1531-like 11
Apolipoprotein A-I Apolipoprotein A-I 11
Pectin lyase-like Pectin lyase-like 11
Ribonuclease PH domain 2-like Ribonuclease PH domain 2-like 11
GAF domain-like Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain 11
GIY-YIG endonuclease C-terminal UvrC-binding domain of UvrB 11
Nucleotide-diphospho-sugar transferases IpsF-like 11
MoeA C-terminal domain-like Periplasmic binding protein-like II 11
PUA domain-like P-loop containing nucleoside triphosphate hydrolases 11
GreA transcript cleavage protein, N-terminal domain FKBP-like 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
Ribonuclease H-like RuvA domain 2-like 11
Heme-dependent peroxidases Heme-dependent peroxidases 11
Arabinanase/levansucrase/invertase Concanavalin A-like lectins/glucanases 11
Hsp33 domain HSP33 redox switch-like 11
DNA repair protein MutS, domain III P-loop containing nucleoside triphosphate hydrolases 11
HCP-like PGBD-like 11
Nucleotidylyl transferase tRNA-binding arm 11
Single hybrid motif TK C-terminal domain-like 11
Transcription factor NusA, N-terminal domain Nucleic acid-binding proteins 11
Methionine synthase domain Methionine synthase activation domain-like 11
LysM domain Duplicated hybrid motif 11
Cobalamin (vitamin B12)-binding domain Methionine synthase activation domain-like 11
P-loop containing nucleoside triphosphate hydrolases TGS-like 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) PRTase-like 11
Carbamoyl phosphate synthetase, large subunit connection domain Methylglyoxal synthase-like 11
PreATP-grasp domain Aldolase 11
PHP14-like Phospholipase D/nuclease 11
Glycoside hydrolase/deacetylase UraD-Like 11
Homo-oligomeric flavin-containing Cys decarboxylases, HFCD CoaB-like 11
Nucleotidyltransferase substrate binding subunit/domain ACT-like 11
NTF2-like NTF2-like 11
ACP-like alpha/beta-Hydrolases 11
Glutathione synthetase ATP-binding domain-like Aldolase 11
NAD(P)-binding Rossmann-fold domains ACP-like 11
Prokaryotic type KH domain (KH-domain type II) Ribosomal protein S3 C-terminal domain 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) Translation proteins 11
N-terminal domain of bifunctional PutA protein ALDH-like 11
Fic-like "Winged helix" DNA-binding domain 11
Tryptophan synthase beta subunit-like PLP-dependent enzymes ACT-like 11
Transmembrane di-heme cytochromes a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 11
Class II aaRS and biotin synthetases Translation proteins 11
5' to 3' exonuclease, C-terminal subdomain Ribonuclease H-like 11
TGS-like ACT-like 11
Sigma2 domain of RNA polymerase sigma factors TPR-like 11
Nucleotide-binding domain FAD/NAD(P)-binding domain 11
Formyltransferase Acetyl-CoA synthetase-like 11
N-terminal domain of MutM-like DNA repair proteins S13-like H2TH domain 11
LuxS/MPP-like metallohydrolase LuxS/MPP-like metallohydrolase 11
PheT/TilS domain Anticodon-binding domain of PheRS 11
NTF2-like FAD/NAD(P)-binding domain 11

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