SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.


Domain combination pairs in Desulfovibrio salexigens DSM 2638

All pairs of domain combinations at the superfamily level are listed here.
The identification of domain pairs does not account for the possibility of non-contiguous domains. Inserted, or interlaced, domains are seen as having a simple pair ordering.

  • For a list of unique full length architectures for this genome click here (can be slow).
Adjacent domain pairs graph

Graph of adjacent domain pairs.


Add or remove domain pairs

The links below permit the addition or removal of specific sets of domain combination pairs.


Jump to [ Top of page · Add/remove domain pairs · Domain combination pairs ]

Add or remove genomes

Change the list of genome two-letter codes in the 'Include genomes' box to include domain-pairs from those genomes.
Change the list of genomes in the 'Exclude genomes' box to exclude domain-pairs from those genomes.
List of all two-letter genome codes.

Add or remove genomes:
Include genomes:
Exclude genomes:


Jump to [ Top of page · Add/remove domain pairs · Add/remove genomes ]

Domain combination pairs

709 domain combination pairs.
Click on a column heading to sort that column, or the 'View' button to see domain architetures for that domain pair combination.

Superfamily (N) Superfamily (C) Number of occurrances Number unique
Homodimeric domain of signal transducing histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 7135
PYP-like sensor domain (PAS domain) ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 5328
PYP-like sensor domain (PAS domain) Homodimeric domain of signal transducing histidine kinase 5025
PYP-like sensor domain (PAS domain) PYP-like sensor domain (PAS domain) 3022
CheY-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 2925
Homodimeric domain of signal transducing histidine kinase CheY-like 2319
P-loop containing nucleoside triphosphate hydrolases Homeodomain-like 226
P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases 2111
CheY-like PYP-like sensor domain (PAS domain) 2117
CheY-like P-loop containing nucleoside triphosphate hydrolases 153
PYP-like sensor domain (PAS domain) Methyl-accepting chemotaxis protein (MCP) signaling domain 156
Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain 146
"Winged helix" DNA-binding domain Periplasmic binding protein-like II 141
Homeodomain-like Tetracyclin repressor-like, C-terminal domain 131
CheY-like Homeodomain-like 131
PYP-like sensor domain (PAS domain) Nucleotide cyclase 1313
Multidrug resistance efflux transporter EmrE Multidrug resistance efflux transporter EmrE 122
Actin-like ATPase domain Actin-like ATPase domain 114
Homeodomain-like Homeodomain-like 114
CheY-like CheY-like 1110
P-loop containing nucleoside triphosphate hydrolases Ribosomal protein S5 domain 2-like 106
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB transmembrane domain 104
NAD(P)-binding Rossmann-fold domains Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 103
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 104
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 104
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 104
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB transmembrane domain 104
GAF domain-like PYP-like sensor domain (PAS domain) 1010
HAMP domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 96
CheY-like HD-domain/PDEase-like 94
HAMP domain-like Homodimeric domain of signal transducing histidine kinase 96
Sensory domain-like Methyl-accepting chemotaxis protein (MCP) signaling domain 97
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Histidine-containing phosphotransfer domain, HPT domain 99
Sensory domain-like PYP-like sensor domain (PAS domain) 98
P-loop containing nucleoside triphosphate hydrolases Translation proteins 86
GAF domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 88
NAD(P)-binding Rossmann-fold domains 6-phosphogluconate dehydrogenase C-terminal domain-like 82
Thiamin diphosphate-binding fold (THDP-binding) TK C-terminal domain-like 85
GAF domain-like Nucleotide cyclase 76
CheY-like Nucleotide cyclase 75
cAMP-binding domain-like "Winged helix" DNA-binding domain 71
CheW-like CheY-like 74
Nucleotidylyl transferase Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 77
Homodimeric domain of signal transducing histidine kinase Histidine-containing phosphotransfer domain, HPT domain 77
Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) 75
Regulatory protein AraC Homeodomain-like 72
CheY-like Histidine-containing phosphotransfer domain, HPT domain 77
ABC transporter transmembrane region P-loop containing nucleoside triphosphate hydrolases 72
HAMP domain-like PYP-like sensor domain (PAS domain) 65
P-loop containing nucleoside triphosphate hydrolases EF-G C-terminal domain-like 64
Sm-like ribonucleoproteins Mechanosensitive channel protein MscS (YggB), C-terminal domain 64
Formate dehydrogenase/DMSO reductase, domains 1-3 ADC-like 61
FAD/NAD(P)-binding domain FAD/NAD-linked reductases, dimerisation (C-terminal) domain 64
"Winged helix" DNA-binding domain GntR ligand-binding domain-like 62
Sigma2 domain of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 63
PreATP-grasp domain Glutathione synthetase ATP-binding domain-like 63
GAF domain-like Homodimeric domain of signal transducing histidine kinase 66
P-loop containing nucleoside triphosphate hydrolases PYP-like sensor domain (PAS domain) 53
NAD(P)-binding Rossmann-fold domains TrkA C-terminal domain-like 54
EF-G C-terminal domain-like EF-G C-terminal domain-like 53
Mechanosensitive channel protein MscS (YggB), transmembrane region Mechanosensitive channel protein MscS (YggB), C-terminal domain 53
Succinyl-CoA synthetase domains Succinyl-CoA synthetase domains 54
CheY-like C-terminal effector domain of the bipartite response regulators 51
Zn-dependent exopeptidases Bacterial exopeptidase dimerisation domain 51
Nucleotide cyclase EAL domain-like 55
Mechanosensitive channel protein MscS (YggB), transmembrane region Sm-like ribonucleoproteins 53
NAD(P)-binding Rossmann-fold domains Succinyl-CoA synthetase domains 54
P-loop containing nucleoside triphosphate hydrolases MOP-like 51
Translation proteins EF-G C-terminal domain-like 53
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheW-like 55
MurD-like peptide ligases, catalytic domain MurD-like peptide ligases, peptide-binding domain 53
PurM N-terminal domain-like PurM C-terminal domain-like 52
GAF domain-like CheY-like 55
P-loop containing nucleoside triphosphate hydrolases C-terminal domain of alpha and beta subunits of F1 ATP synthase 41
Glutathione synthetase ATP-binding domain-like Rudiment single hybrid motif 41
Histidine-containing phosphotransfer domain, HPT domain CheW-like 44
PYP-like sensor domain (PAS domain) Homeodomain-like 42
MetI-like MetI-like 43
beta-Roll beta-Roll 43
Composite domain of metallo-dependent hydrolases Metallo-dependent hydrolases 43
TrkA C-terminal domain-like TrkA C-terminal domain-like 42
Periplasmic binding protein-like II ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 42
Alpha-L RNA-binding motif Pseudouridine synthase 42
NAD(P)-binding Rossmann-fold domains Glutathione synthetase ATP-binding domain-like 43
Riboflavin synthase domain-like Ferredoxin reductase-like, C-terminal NADP-linked domain 43
GAF domain-like P-loop containing nucleoside triphosphate hydrolases 42
Periplasmic binding protein-like II PYP-like sensor domain (PAS domain) 42
TPR-like TPR-like 43
Nucleic acid-binding proteins Class II aaRS and biotin synthetases 43
Succinyl-CoA synthetase domains Glutathione synthetase ATP-binding domain-like 43
CheY-like Methylesterase CheB, C-terminal domain 41
HAMP domain-like Methyl-accepting chemotaxis protein (MCP) signaling domain 44
N-terminal domain of alpha and beta subunits of F1 ATP synthase P-loop containing nucleoside triphosphate hydrolases 41
Sensory domain-like HAMP domain-like 44
EF-G C-terminal domain-like Ribosomal protein S5 domain 2-like 42
alpha-helical ferredoxin Nucleotide-binding domain 44
ACT-like ACT-like 42
Periplasmic binding protein-like II Homodimeric domain of signal transducing histidine kinase 42
N-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase 41
P-loop containing nucleoside triphosphate hydrolases HprK N-terminal domain-like 42
Aminoacid dehydrogenase-like, N-terminal domain NAD(P)-binding Rossmann-fold domains 41
Sensory domain-like Homodimeric domain of signal transducing histidine kinase 44
Sensory domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 44
Voltage-gated potassium channels NAD(P)-binding Rossmann-fold domains 43
PreATP-grasp domain Rudiment single hybrid motif 41
Glutathione synthetase ATP-binding domain-like Phosphohistidine domain 42
Nucleic acid-binding proteins Nucleic acid-binding proteins 44
Formate/glycerate dehydrogenase catalytic domain-like NAD(P)-binding Rossmann-fold domains 41
P-loop containing nucleoside triphosphate hydrolases Class I glutamine amidotransferase-like 42
FAD/NAD(P)-binding domain FAD/NAD(P)-binding domain 43
Chemotaxis receptor methyltransferase CheR, N-terminal domain S-adenosyl-L-methionine-dependent methyltransferases 41
FAD/NAD(P)-binding domain Rhodanese/Cell cycle control phosphatase 32
CheY-like TPR-like 33
Phosphoglucomutase, first 3 domains Phosphoglucomutase, C-terminal domain 32
Clc chloride channel CBS-domain pair 31
GAF domain-like GAF domain-like 33
MoeA N-terminal region -like Molybdenum cofactor biosynthesis proteins 33
4Fe-4S ferredoxins Nitrite and sulphite reductase 4Fe-4S domain-like 32
Translation proteins Ribosomal protein S5 domain 2-like 31
HAMP domain-like CheY-like 33
"Winged helix" DNA-binding domain S-adenosyl-L-methionine-dependent methyltransferases 31
Double Clp-N motif P-loop containing nucleoside triphosphate hydrolases 31
DNA methylase specificity domain DNA methylase specificity domain 31
Nitrite/Sulfite reductase N-terminal domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 32
Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 32
HD-domain/PDEase-like PYP-like sensor domain (PAS domain) 33
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Ribosomal protein S5 domain 2-like 33
ValRS/IleRS/LeuRS editing domain Nucleotidylyl transferase 33
Homodimeric domain of signal transducing histidine kinase CheW-like 33
GAF domain-like HD-domain/PDEase-like 32
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 32
lambda repressor-like DNA-binding domains Periplasmic binding protein-like I 31
P-loop containing nucleoside triphosphate hydrolases "Winged helix" DNA-binding domain 33
Thiamin diphosphate-binding fold (THDP-binding) DHS-like NAD/FAD-binding domain 31
Class II aaRS and biotin synthetases Class II aaRS ABD-related 33
FAD/NAD(P)-binding domain 4Fe-4S ferredoxins 33
Aldehyde ferredoxin oxidoreductase, N-terminal domain Aldehyde ferredoxin oxidoreductase, C-terminal domains 31
FAD-binding/transporter-associated domain-like FAD-linked oxidases, C-terminal domain 32
PLP-binding barrel Alanine racemase C-terminal domain-like 31
Thiolase-like Thiolase-like 31
PYP-like sensor domain (PAS domain) EAL domain-like 33
HAMP domain-like PP2C-like 32
FAD/NAD-linked reductases, dimerisation (C-terminal) domain Rhodanese/Cell cycle control phosphatase 32
PYP-like sensor domain (PAS domain) Histidine-containing phosphotransfer domain, HPT domain 33
6-phosphogluconate dehydrogenase C-terminal domain-like UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 31
4Fe-4S ferredoxins Radical SAM enzymes 31
CcmK-like CcmK-like 31
GAF domain-like Homeodomain-like 31
Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 32
Nucleic acid-binding proteins RuvA domain 2-like 33
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 32
Triger factor/SurA peptide-binding domain-like FKBP-like 33
NAD(P)-binding Rossmann-fold domains UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 31
Calcium ATPase, transduction domain A HAD-like 32
Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like 32
ValRS/IleRS/LeuRS editing domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 33
Phosphoglucomutase, first 3 domains Phosphoglucomutase, first 3 domains 32
"Winged helix" DNA-binding domain Dimeric alpha+beta barrel 31
Zinc beta-ribbon DNA primase core 22
HprK N-terminal domain-like Isocitrate/Isopropylmalate dehydrogenase-like 21
Phosphohistidine domain Phosphoenolpyruvate/pyruvate domain 22
Translation proteins EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 22
E set domains (Trans)glycosidases 22
Molybdenum cofactor biosynthesis proteins MoeA C-terminal domain-like 22
4Fe-4S ferredoxins Nucleotide-binding domain 22
Penicillin binding protein dimerisation domain beta-lactamase/transpeptidase-like 22
4Fe-4S ferredoxins alpha-helical ferredoxin 22
EAL domain-like HD-domain/PDEase-like 21
Pentapeptide repeat-like Pentapeptide repeat-like 22
Radical SAM enzymes Nitrogenase accessory factor-like 21
"Winged helix" DNA-binding domain PLP-dependent transferases 21
Nucleotidyltransferase Poly A polymerase C-terminal region-like 22
Prokaryotic type I DNA topoisomerase Zinc beta-ribbon 22
Sensory domain-like CheY-like 22
MoeA N-terminal region -like MoeA C-terminal domain-like 22
MurE/MurF N-terminal domain MurD-like peptide ligases, peptide-binding domain 21
Histidine-containing phosphotransfer domain, HPT domain Histidine-containing phosphotransfer domain, HPT domain 22
Nitrite/Sulfite reductase N-terminal domain-like 4Fe-4S ferredoxins 21
GroEL-intermediate domain like GroEL apical domain-like 21
GroES-like NAD(P)-binding Rossmann-fold domains 21
HD-domain/PDEase-like Nucleotidyltransferase 22
Nucleotidylyl transferase Ribokinase-like 21
PDZ domain-like ClpP/crotonase 22
PDZ domain-like PDZ domain-like 21
Ferritin-like Rubredoxin-like 21
Lysozyme-like beta-lactamase/transpeptidase-like 22
PilZ domain-like PilZ domain-like 21
Glutathione synthetase ATP-binding domain-like Acyl-CoA N-acyltransferases (Nat) 22
PYP-like sensor domain (PAS domain) C-terminal effector domain of the bipartite response regulators 22
Creatinase/prolidase N-terminal domain Creatinase/aminopeptidase 21
P-loop containing nucleoside triphosphate hydrolases post-AAA+ oligomerization domain-like 22
Methyl-accepting chemotaxis protein (MCP) signaling domain Hemerythrin-like 21
HCP-like HCP-like 21
Class II aaRS and biotin synthetases ThrRS/AlaRS common domain 22
ClpP/crotonase ClpP/crotonase 21
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Adenine nucleotide alpha hydrolases-like 21
CheY-like PP2C-like 22
Nucleic acid-binding proteins Translation proteins SH3-like domain 22
4Fe-4S ferredoxins FMN-dependent nitroreductase-like 21
Nucleotide cyclase CBS-domain pair 22
Barwin-like endoglucanases Sporulation related repeat 21
CheY-like CBS-domain pair 22
CBS-domain pair ACT-like 21
HSP40/DnaJ peptide-binding domain HSP40/DnaJ peptide-binding domain 22
DnaK suppressor protein DksA, alpha-hairpin domain Glucocorticoid receptor-like (DNA-binding domain) 21
Nucleotidyltransferase ACT-like 22
LuxS/MPP-like metallohydrolase LuxS/MPP-like metallohydrolase 22
Sensory domain-like Sensory domain-like 22
TPR-like OmpA-like 21
Multiheme cytochromes Multiheme cytochromes 22
4Fe-4S ferredoxins Fe-only hydrogenase 21
P-loop containing nucleoside triphosphate hydrolases Isocitrate/Isopropylmalate dehydrogenase-like 21
Adenine nucleotide alpha hydrolases-like Adenine nucleotide alpha hydrolases-like 21
P-loop containing nucleoside triphosphate hydrolases EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 22
Ribosomal protein S5 domain 2-like GHMP Kinase, C-terminal domain 22
Aldolase 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 21
HlyD-like secretion proteins HlyD-like secretion proteins 22
Sensory domain-like HD-domain/PDEase-like 22
Chaperone J-domain HSP40/DnaJ peptide-binding domain 22
MurCD N-terminal domain MurD-like peptide ligases, peptide-binding domain 21
HD-domain/PDEase-like HD-domain/PDEase-like 22
Rhodanese/Cell cycle control phosphatase Rhodanese/Cell cycle control phosphatase 22
Nucleotide-binding domain Nucleotide-binding domain 22
HD-domain/PDEase-like ACT-like 22
MurE/MurF N-terminal domain MurD-like peptide ligases, catalytic domain 21
Flavoproteins 4Fe-4S ferredoxins 21
PUA domain-like Ribosomal protein S5 domain 2-like 21
Enolase N-terminal domain-like Enolase C-terminal domain-like 21
MurCD N-terminal domain MurD-like peptide ligases, catalytic domain 21
Trypsin-like serine proteases PDZ domain-like 21
GroEL equatorial domain-like GroEL apical domain-like 21
GroEL equatorial domain-like GroEL-intermediate domain like 21
lambda repressor-like DNA-binding domains RmlC-like cupins 21
S-adenosyl-L-methionine-dependent methyltransferases TPR-like 21
P-loop containing nucleoside triphosphate hydrolases TrpR-like 22
PUA domain-like P-loop containing nucleoside triphosphate hydrolases 21
tRNA-binding arm Class II aaRS and biotin synthetases 21
DNA repair protein MutS, domain III P-loop containing nucleoside triphosphate hydrolases 22
P-loop containing nucleoside triphosphate hydrolases CBS-domain pair 21
4Fe-4S ferredoxins FMN-linked oxidoreductases 21
cAMP-binding domain-like FliG 21
Voltage-gated potassium channels TrkA C-terminal domain-like 21
FwdE-like Molybdenum cofactor biosynthesis proteins 21
Terpenoid cyclases/Protein prenyltransferases Terpenoid cyclases/Protein prenyltransferases 11
Phospholipase D/nuclease Phospholipase D/nuclease 11
Cysteine proteinases Cysteine proteinases 11
DNA ligase/mRNA capping enzyme, catalytic domain RuvA domain 2-like 11
"Winged helix" DNA-binding domain "Winged helix" DNA-binding domain 11
Sensory domain-like PP2C-like 11
Radical SAM enzymes S-adenosyl-L-methionine-dependent methyltransferases 11
FAD/NAD(P)-binding domain FAD-linked reductases, C-terminal domain 11
Periplasmic binding protein-like II Lysozyme-like 11
PUA domain-like alpha/beta knot 11
Class I glutamine amidotransferase-like Homeodomain-like 11
EspE N-terminal domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
HPr-like Phosphohistidine domain 11
Metallo-hydrolase/oxidoreductase Flavoproteins 11
Nucleic acid-binding proteins Prokaryotic type KH domain (KH-domain type II) 11
Sensory domain-like GAF domain-like 11
HAMP domain-like Nucleotide cyclase 11
TPR-like Homodimeric domain of signal transducing histidine kinase 11
P-loop containing nucleoside triphosphate hydrolases Hypothetical protein YjiA, C-terminal domain 11
CBS-domain pair Inosine monophosphate dehydrogenase (IMPDH) 11
Heme-dependent peroxidases Heme-dependent peroxidases 11
S-adenosylmethionine synthetase S-adenosylmethionine synthetase 11
P-loop containing nucleoside triphosphate hydrolases Homodimeric domain of signal transducing histidine kinase 11
Alpha-L RNA-binding motif S-adenosyl-L-methionine-dependent methyltransferases 11
Metallo-dependent phosphatases 5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain 11
TPR-like Nucleotide-diphospho-sugar transferases 11
Macro domain-like Zn-dependent exopeptidases 11
Pre-protein crosslinking domain of SecA Helical scaffold and wing domains of SecA 11
UDP-Glycosyltransferase/glycogen phosphorylase S-adenosyl-L-methionine-dependent methyltransferases 11
ACT-like Formyltransferase 11
Class II aaRS and biotin synthetases Translation proteins 11
DNA primase core P-loop containing nucleoside triphosphate hydrolases 11
HD-domain/PDEase-like HAD-like 11
GAF domain-like EAL domain-like 11
NE0471 N-terminal domain-like lambda repressor-like DNA-binding domains 11
S13-like H2TH domain Glucocorticoid receptor-like (DNA-binding domain) 11
PheT/TilS domain Putative DNA-binding domain 11
Tex N-terminal region-like RuvA domain 2-like 11
Thioredoxin-like FAD/NAD(P)-binding domain 11
Nucleic acid-binding proteins S-adenosyl-L-methionine-dependent methyltransferases 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) ThrRS/AlaRS common domain 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Nucleotidylyl transferase 11
Staphylococcal nuclease OMPA-like 11
LysM domain LysM domain 11
Ribbon-helix-helix "Winged helix" DNA-binding domain 11
(Trans)glycosidases Glycosyl hydrolase domain 11
PIN domain-like DNA/RNA polymerases 11
PK beta-barrel domain-like PK C-terminal domain-like 11
Coiled-coil domain of nucleotide exchange factor GrpE Head domain of nucleotide exchange factor GrpE 11
S-adenosyl-L-methionine-dependent methyltransferases S-adenosyl-L-methionine-dependent methyltransferases 11
DNA repair protein MutS, domain I P-loop containing nucleoside triphosphate hydrolases 11
Periplasmic binding protein-like II GAF domain-like 11
3-carboxy-cis,cis-mucoante lactonizing enzyme YWTD domain 11
Phage tail proteins Phage tail proteins 11
HMA, heavy metal-associated domain Calcium ATPase, transduction domain A 11
Ribonuclease PH domain 2-like Ribonuclease PH domain 2-like 11
Aminopeptidase/glucanase lid domain Zn-dependent exopeptidases 11
P-loop containing nucleoside triphosphate hydrolases Pre-protein crosslinking domain of SecA 11
C-terminal UvrC-binding domain of UvrB RuvA domain 2-like 11
Cation efflux protein transmembrane domain-like Cation efflux protein cytoplasmic domain-like 11
Adenine nucleotide alpha hydrolases-like Argininosuccinate synthetase, C-terminal domain 11
Lysozyme-like LysM domain 11
HPr-like Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain 11
PA domain Zn-dependent exopeptidases 11
Insert subdomain of RNA polymerase alpha subunit RBP11-like subunits of RNA polymerase 11
Tex N-terminal region-like Ribonuclease H-like 11
Nucleotide-diphospho-sugar transferases Molybdenum cofactor biosynthesis proteins 11
Nucleotide-diphospho-sugar transferases RmlC-like cupins 11
Zinc beta-ribbon P-loop containing nucleoside triphosphate hydrolases 11
P-loop containing nucleoside triphosphate hydrolases C-terminal UvrC-binding domain of UvrB 11
PTS system fructose IIA component-like Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain 11
Translation proteins ThrRS/AlaRS common domain 11
HMA, heavy metal-associated domain HAD-like 11
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphohistidine domain 11
Acylphosphatase/BLUF domain-like YrdC/RibB 11
ACT-like 4Fe-4S ferredoxins 11
CheY-like Glutathione synthetase ATP-binding domain-like 11
FAD/NAD(P)-binding domain HI0933 insert domain-like 11
lambda integrase-like, N-terminal domain DNA breaking-rejoining enzymes 11
S-adenosyl-L-methionine-dependent methyltransferases NAD(P)-binding Rossmann-fold domains 11
Chorismate mutase II Periplasmic binding protein-like II 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain ACT-like 11
Ribonuclease H-like Nucleic acid-binding proteins 11
Nucleotide-diphospho-sugar transferases Nucleotide-diphospho-sugar transferases 11
Caspase-like Sporulation related repeat 11
Ribosomal protein S5 domain 2-like Type II DNA topoisomerase 11
P-loop containing nucleoside triphosphate hydrolases Helical scaffold and wing domains of SecA 11
HD-domain/PDEase-like TGS-like 11
CO dehydrogenase ISP C-domain like Molybdenum cofactor-binding domain 11
FabD/lysophospholipase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 11
YhbC-like, N-terminal domain YhbC-like, C-terminal domain 11
Aldolase Chorismate mutase II 11
Actin-like ATPase domain Heat shock protein 70kD (HSP70), C-terminal subdomain 11
TK C-terminal domain-like 4Fe-4S ferredoxins 11
PreATP-grasp domain Methylglyoxal synthase-like 11
Heat shock protein 70kD (HSP70), peptide-binding domain Heat shock protein 70kD (HSP70), C-terminal subdomain 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
Cytidine deaminase-like Dihydrofolate reductase-like 11
Nqo1 middle domain-like alpha-helical ferredoxin 11
Ribosomal L11/L12e N-terminal domain Ribosomal protein L11, C-terminal domain 11
Alkaline phosphatase-like Nucleotide-diphospho-sugar transferases 11
beta-lactamase/transpeptidase-like Penicillin-binding protein 2x (pbp-2x), c-terminal domain 11
CorA soluble domain-like Magnesium transport protein CorA, transmembrane region 11
2Fe-2S ferredoxin-like Riboflavin synthase domain-like 11
Ribonuclease H-like RuvA domain 2-like 11
DnaJ/Hsp40 cysteine-rich domain HSP40/DnaJ peptide-binding domain 11
UROD/MetE-like UROD/MetE-like 11
Zinc beta-ribbon Zinc beta-ribbon 11
TPR-like PYP-like sensor domain (PAS domain) 11
UbiD C-terminal domain-like UbiD C-terminal domain-like 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) PRTase-like 11
Prokaryotic type KH domain (KH-domain type II) Ribosomal protein S3 C-terminal domain 11
Periplasmic binding protein-like II ACT-like 11
Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 11
NAD(P)-binding Rossmann-fold domains Siroheme synthase middle domains-like 11
PurM N-terminal domain-like PurM N-terminal domain-like 11
Nucleotide-diphospho-sugar transferases MoeA N-terminal region -like 11
P-loop containing nucleoside triphosphate hydrolases RecA protein, C-terminal domain 11
Galactose-binding domain-like PYP-like sensor domain (PAS domain) 11
L,D-transpeptidase catalytic domain-like NTF2-like 11
IlvD/EDD N-terminal domain-like LeuD/IlvD-like 11
Calcium-dependent phosphotriesterase Homodimeric domain of signal transducing histidine kinase 11
NTF2-like Sec-C motif 11
Ribosomal protein S5 domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
Putative DNA-binding domain S-adenosyl-L-methionine-dependent methyltransferases 11
Metallo-hydrolase/oxidoreductase Rhodanese/Cell cycle control phosphatase 11
vWA-like OmpA-like 11
NAD(P)-binding Rossmann-fold domains Acyl-CoA N-acyltransferases (Nat) 11
EspE N-terminal domain-like CheW-like 11
Eukaryotic type KH-domain (KH-domain type I) HD-domain/PDEase-like 11
Thioredoxin-like Thioredoxin-like 11
Tryptophan synthase beta subunit-like PLP-dependent enzymes Nucleotidylyl transferase 11
NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains 11
EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain "Winged helix" DNA-binding domain 11
Obg GTP-binding protein N-terminal domain P-loop containing nucleoside triphosphate hydrolases 11
YbaK/ProRS associated domain Class II aaRS ABD-related 11
Nucleic acid-binding proteins PheT/TilS domain 11
NAD(P)-binding Rossmann-fold domains Hemerythrin-like 11
P-loop containing nucleoside triphosphate hydrolases Restriction endonuclease-like 11
Nucleotide-diphospho-sugar transferases IpsF-like 11
TrmE connector domain P-loop containing nucleoside triphosphate hydrolases 11
TPR-like GAF domain-like 11
Alpha-L RNA-binding motif P-loop containing nucleoside triphosphate hydrolases 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases tRNA-binding arm 11
Tubulin nucleotide-binding domain-like Tubulin C-terminal domain-like 11
HD-domain/PDEase-like Nucleotide cyclase 11
PurM C-terminal domain-like PurM C-terminal domain-like 11
L9 N-domain-like Ribosomal protein L9 C-domain 11
Trigger factor ribosome-binding domain FKBP-like 11
alpha-helical ferredoxin Respiratory nitrate reductase 1 gamma chain 11
EspE N-terminal domain-like Homodimeric domain of signal transducing histidine kinase 11
Histidine-containing phosphotransfer domain, HPT domain PLP-dependent transferases 11
DNA ligase/mRNA capping enzyme, catalytic domain BRCT domain 11
ARM repeat CheY-like 11
Aconitase iron-sulfur domain LeuD/IlvD-like 11
alpha-helical ferredoxin alpha-helical ferredoxin 11
P-loop containing nucleoside triphosphate hydrolases TRCF domain-like 11
Cyclophilin-like Cyclophilin-like 11
Zinc beta-ribbon Prokaryotic SH3-related domain 11
2Fe-2S ferredoxin-like CO dehydrogenase molybdoprotein N-domain-like 11
HMA, heavy metal-associated domain Calcium ATPase, transmembrane domain M 11
Nucleic acid-binding proteins ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
GAF domain-like HlyD-like secretion proteins 11
FMN-binding split barrel 4Fe-4S ferredoxins 11
Glucocorticoid receptor-like (DNA-binding domain) P-loop containing nucleoside triphosphate hydrolases 11
Nucleic acid-binding proteins GAD domain-like 11
Glutathione synthetase ATP-binding domain-like Methylglyoxal synthase-like 11
Domain of the SRP/SRP receptor G-proteins P-loop containing nucleoside triphosphate hydrolases 11
Carbamate kinase-like PUA domain-like 11
Glutamine synthetase/guanido kinase GatB/YqeY motif 11
2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain Alkaline phosphatase-like 11
Homo-oligomeric flavin-containing Cys decarboxylases, HFCD CoaB-like 11
Translation proteins "Winged helix" DNA-binding domain 11
CBS-domain pair MgtE membrane domain-like 11
2Fe-2S ferredoxin-like alpha-helical ferredoxin 11
Protein kinase-like (PK-like) GAF domain-like 11
Glycerol-3-phosphate (1)-acyltransferase Acyl-CoA N-acyltransferases (Nat) 11
Radical SAM enzymes TPR-like 11
DNA breaking-rejoining enzymes MOP-like 11
Aldolase Single hybrid motif 11
YrdC/RibB RibA-like 11
TK C-terminal domain-like Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 11
CbiG N-terminal domain-like CobE/GbiG C-terminal domain-like 11
Prokaryotic type KH domain (KH-domain type II) Prokaryotic type KH domain (KH-domain type II) 11
Nicotinate/Quinolinate PRTase N-terminal domain-like Nicotinate/Quinolinate PRTase C-terminal domain-like 11
Nucleotidylyl transferase Alpha-L RNA-binding motif 11
TPR-like Porins 11
Riboflavin synthase domain-like Riboflavin synthase domain-like 11
Glutathione synthetase ATP-binding domain-like Carbamoyl phosphate synthetase, large subunit connection domain 11
P-loop containing nucleoside triphosphate hydrolases FtsH protease domain-like 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
Voltage-gated potassium channels Hemerythrin-like 11
DHH phosphoesterases CBS-domain pair 11
MFS general substrate transporter ApbE-like 11
Tryptophan synthase beta subunit-like PLP-dependent enzymes Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
RuvA domain 2-like P-loop containing nucleoside triphosphate hydrolases 11
Glutamyl tRNA-reductase catalytic, N-terminal domain NAD(P)-binding Rossmann-fold domains 11
N-terminal domain of DnaB helicase P-loop containing nucleoside triphosphate hydrolases 11
TPR-like UDP-Glycosyltransferase/glycogen phosphorylase 11
E set domains Glycosyl hydrolase domain 11
ACT-like HAD-like 11
PUA domain-like Nucleotidylyl transferase 11
Nucleic acid-binding proteins Putative DNA-binding domain 11
CBS-domain pair Poly A polymerase C-terminal region-like 11
Carbamoyl phosphate synthetase, small subunit N-terminal domain Class I glutamine amidotransferase-like 11
FliG FliG 11
HPr-like Phosphoenolpyruvate/pyruvate domain 11
PurS-like PurM C-terminal domain-like 11
Sporulation related repeat TPR-like 11
HIT-like HIT-like 11
Translation proteins Initiation factor IF2/eIF5b, domain 3 11
Glutamine synthetase, N-terminal domain Glutamine synthetase/guanido kinase 11
Nucleotidylyl transferase tRNA-binding arm 11
ClpP/crotonase NfeD domain-like 11
RuvA domain 2-like DNA helicase RuvA subunit, C-terminal domain 11
DNA clamp DNA clamp 11
Nucleotide-diphospho-sugar transferases PLP-dependent transferases 11
TPR-like HCP-like 11
Nucleic acid-binding proteins P-loop containing nucleoside triphosphate hydrolases 11
TGS-like ACT-like 11
Adenine nucleotide alpha hydrolases-like GMP synthetase C-terminal dimerisation domain 11
Rho N-terminal domain-like Nucleic acid-binding proteins 11
4Fe-4S ferredoxins P-loop containing nucleoside triphosphate hydrolases 11
PEP carboxykinase N-terminal domain PEP carboxykinase-like 11
Ribokinase-like AraD/HMP-PK domain-like 11
Chaperone J-domain DnaJ/Hsp40 cysteine-rich domain 11
CO dehydrogenase molybdoprotein N-domain-like Molybdenum cofactor-binding domain 11
GreA transcript cleavage protein, N-terminal domain FKBP-like 11
Succinyl-CoA synthetase domains Acyl-CoA N-acyltransferases (Nat) 11
Class I glutamine amidotransferase-like GMP synthetase C-terminal dimerisation domain 11
GIY-YIG endonuclease RuvA domain 2-like 11
MgtE N-terminal domain-like MgtE membrane domain-like 11
Tetrapyrrole methylase HemD-like 11
Tex N-terminal region-like Nucleic acid-binding proteins 11
Insert subdomain of RNA polymerase alpha subunit C-terminal domain of RNA polymerase alpha subunit 11
Class II aaRS and biotin synthetases Anticodon-binding domain of PheRS 11
Transcription factor NusA, N-terminal domain Nucleic acid-binding proteins 11
"Winged helix" DNA-binding domain NAD(P)-binding Rossmann-fold domains 11
Flagellar hook protein flgE Flagellar hook protein flgE 11
TolB, N-terminal domain Tricorn protease N-terminal domain 11
FAD-binding/transporter-associated domain-like Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain 11
Ribosomal protein L6 Ribosomal protein L6 11
FAD-binding/transporter-associated domain-like alpha-helical ferredoxin 11
P-loop containing nucleoside triphosphate hydrolases ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
FAD-linked oxidases, C-terminal domain alpha-helical ferredoxin 11
HAMP domain-like Histidine-containing phosphotransfer domain, HPT domain 11
"Winged helix" DNA-binding domain NagB/RpiA/CoA transferase-like 11
TPR-like MetI-like 11
Homocysteine S-methyltransferase Dihydropteroate synthetase-like 11
Epsilon subunit of F1F0-ATP synthase N-terminal domain Epsilon subunit of F1F0-ATP synthase C-terminal domain 11
Nucleotide-diphospho-sugar transferases Trimeric LpxA-like enzymes 11
PhoU-like Protein kinase-like (PK-like) 11
Acyl-CoA N-acyltransferases (Nat) Acyl-CoA N-acyltransferases (Nat) 11
SufE/NifU Fe-S cluster assembly (FSCA) domain-like 11
Periplasmic binding protein-like II Histidine-containing phosphotransfer domain, HPT domain 11
GIY-YIG endonuclease C-terminal UvrC-binding domain of UvrB 11
EAL domain-like CBS-domain pair 11
YajQ-like YajQ-like 11
CheY-like Ribosomal protein S5 domain 2-like 11
Nucleotide cyclase TPR-like 11
2Fe-2S ferredoxin-like Molybdenum cofactor-binding domain 11
DPP6 N-terminal domain-like alpha/beta-Hydrolases 11
Zn-dependent exopeptidases Multidrug efflux transporter AcrB transmembrane domain 11
MOP-like MOP-like 11
DHH phosphoesterases Poly A polymerase C-terminal region-like 11
ARM repeat ARM repeat 11
Periplasmic binding protein-like II Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain 11
RBP11-like subunits of RNA polymerase C-terminal domain of RNA polymerase alpha subunit 11
NAD(P)-binding Rossmann-fold domains Glutamyl tRNA-reductase dimerization domain 11
2Fe-2S ferredoxin-like CO dehydrogenase ISP C-domain like 11
Methionine synthase domain Cobalamin (vitamin B12)-binding domain 11
Aldolase post-HMGL domain-like 11
Molybdenum cofactor biosynthesis proteins Periplasmic binding protein-like II 11
Ribbon-helix-helix ACT-like 11
Thioesterase/thiol ester dehydrase-isomerase Thioesterase/thiol ester dehydrase-isomerase 11
N-utilization substance G protein NusG, N-terminal domain Translation proteins SH3-like domain 11
P-loop containing nucleoside triphosphate hydrolases Signal peptide-binding domain 11
Nucleic acid-binding proteins DNA helicase RuvA subunit, C-terminal domain 11
FMN-binding split barrel UbiD C-terminal domain-like 11
Chorismate mutase II EPT/RTPC-like 11
HMA, heavy metal-associated domain HMA, heavy metal-associated domain 11
P-loop containing nucleoside triphosphate hydrolases Initiation factor IF2/eIF5b, domain 3 11
PurS-like PurM N-terminal domain-like 11
FAD-linked oxidoreductase ALDH-like 11
Phosphoenolpyruvate/pyruvate domain PK C-terminal domain-like 11
Nqo1 FMN-binding domain-like alpha-helical ferredoxin 11
S-adenosyl-L-methionine-dependent methyltransferases P-loop containing nucleoside triphosphate hydrolases 11
DNA repair protein MutS, domain II P-loop containing nucleoside triphosphate hydrolases 11
FAD-linked oxidases, C-terminal domain FAD-linked oxidases, C-terminal domain 11
Ribosomal protein S5 domain 2-like Nucleic acid-binding proteins 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) SIS domain 11
PA domain Multidrug efflux transporter AcrB transmembrane domain 11
DNA repair protein MutS, domain II DNA repair protein MutS, domain III 11
lambda repressor-like DNA-binding domains LexA/Signal peptidase 11
CarD-like TRCF domain-like 11
Radical SAM enzymes Sec-C motif 11
Nucleotidylyl transferase Ribosomal protein L25-like 11
Ribosomal protein S5 domain 2-like HSP90 C-terminal domain 11
P-loop containing nucleoside triphosphate hydrolases HRDC-like 11
TPR-like Caspase-like 11
CBS-domain pair Nucleotidyltransferase 11
Nucleotide-binding domain FAD-linked reductases, C-terminal domain 11
Translation proteins PRC-barrel domain 11
SirA-like DsrEFH-like 11
Transcription factor NusA, N-terminal domain Prokaryotic type KH domain (KH-domain type II) 11
Periplasmic binding protein-like II Nucleotide cyclase 11
P-loop containing nucleoside triphosphate hydrolases HCP-like 11
Carbamate kinase-like ACT-like 11
Homocysteine S-methyltransferase Methionine synthase domain 11
Class II aaRS and biotin synthetases GAD domain-like 11
Protein kinase-like (PK-like) Homodimeric domain of signal transducing histidine kinase 11
N-terminal domain of MutM-like DNA repair proteins Glucocorticoid receptor-like (DNA-binding domain) 11
Trigger factor ribosome-binding domain Triger factor/SurA peptide-binding domain-like 11
HAD-like Calcium ATPase, transmembrane domain M 11
P-loop containing nucleoside triphosphate hydrolases TGS-like 11
Penicillin binding protein dimerisation domain Penicillin-binding protein 2x (pbp-2x), c-terminal domain 11
Peptide methionine sulfoxide reductase Mss4-like 11
NTF2-like NTF2-like 11
dsRNA-binding domain-like Ribosomal protein S5 domain 2-like 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase DNA mismatch repair protein MutL 11
Putative DNA-binding domain Anticodon-binding domain of PheRS 11
Protein kinase-like (PK-like) P-loop containing nucleoside triphosphate hydrolases 11
PTS system fructose IIA component-like HPr-like 11
PreATP-grasp domain Carbamoyl phosphate synthetase, large subunit connection domain 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Type II DNA topoisomerase 11
PheT/TilS domain Class II aaRS and biotin synthetases 11
Class II aaRS and biotin synthetases Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) 11
Protein kinase-like (PK-like) ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Calcium-dependent phosphotriesterase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Folate-binding domain Aminomethyltransferase beta-barrel domain 11
Sporulation related repeat Porins 11
PTS system fructose IIA component-like Phosphoenolpyruvate/pyruvate domain 11
Nqo1 FMN-binding domain-like Nqo1 middle domain-like 11
Protein kinase-like (PK-like) TPR-like 11
Nucleotidylyl transferase Nucleic acid-binding proteins 11
Ribbon-helix-helix GntR ligand-binding domain-like 11
NagB/RpiA/CoA transferase-like alpha-helical ferredoxin 11
NAD(P)-binding Rossmann-fold domains ACT-like 11
PreATP-grasp domain PreATP-grasp domain 11
TolB, N-terminal domain Integrin alpha N-terminal domain 11
Subtilisin-like Galactose-binding domain-like 11
Formyltransferase FMT C-terminal domain-like 11
Alpha subunit of glutamate synthase, C-terminal domain 4Fe-4S ferredoxins 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases Nucleic acid-binding proteins 11
Homeodomain-like Probable bacterial effector-binding domain 11
all-alpha NTP pyrophosphatases all-alpha NTP pyrophosphatases 11
Ribosomal protein L7/12, oligomerisation (N-terminal) domain ClpS-like 11
Chorismate mutase II ACT-like 11
Nucleotidylyl transferase Riboflavin kinase-like 11
CO dehydrogenase ISP C-domain like CO dehydrogenase molybdoprotein N-domain-like 11
Dihydropteroate synthetase-like Methionine synthase domain 11
Ribosomal protein S5 domain 2-like Ribonuclease PH domain 2-like 11
ParB/Sulfiredoxin KorB DNA-binding domain-like 11
S-adenosyl-L-methionine-dependent methyltransferases Putative methyltransferase TM0872, insert domain 11
Nucleotide-diphospho-sugar transferases HD-domain/PDEase-like 11
"Winged helix" DNA-binding domain Acyl-CoA N-acyltransferases (Nat) 11
PHP domain-like AF1531-like 11
GAF domain-like PP2C-like 11
YjeF N-terminal domain-like Ribokinase-like 11
EspE N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 11
PHP domain-like P-loop containing nucleoside triphosphate hydrolases 11
Putative DNA-binding domain Probable bacterial effector-binding domain 11
EAL domain-like Sensory domain-like 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain III 11
Pseudouridine synthase P-loop containing nucleoside triphosphate hydrolases 11
Adenine nucleotide alpha hydrolases-like MesJ substrate recognition domain-like 11
P-loop containing nucleoside triphosphate hydrolases SMR domain-like 11
Thiamin diphosphate-binding fold (THDP-binding) 4Fe-4S ferredoxins 11
Rho N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 11
Actin-like ATPase domain Heat shock protein 70kD (HSP70), peptide-binding domain 11
Carbamoyl phosphate synthetase, large subunit connection domain Methylglyoxal synthase-like 11
Dihydropteroate synthetase-like Cobalamin (vitamin B12)-binding domain 11
Protein kinase-like (PK-like) PYP-like sensor domain (PAS domain) 11
DhaL-like DAK1/DegV-like 11
NusB-like S-adenosyl-L-methionine-dependent methyltransferases 11
Nucleotidylyl transferase An anticodon-binding domain of class I aminoacyl-tRNA synthetases 11
Alpha subunit of glutamate synthase, C-terminal domain FAD/NAD(P)-binding domain 11
Periplasmic binding protein-like II GlnB-like 11
PIN domain-like P-loop containing nucleoside triphosphate hydrolases 11
P-loop containing nucleoside triphosphate hydrolases CarD-like 11
PLP-dependent transferases Class I glutamine amidotransferase-like 11
L30e-like alpha/beta knot 11
Nucleotidyltransferase TGS-like 11
Periplasmic binding protein-like II CheY-like 11
MoeA C-terminal domain-like Periplasmic binding protein-like II 11
Phage tail proteins gp5 N-terminal domain-like 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) Translation proteins 11
Pectin lyase-like TPR-like 11
Inosine monophosphate dehydrogenase (IMPDH) Nitrite and sulphite reductase 4Fe-4S domain-like 11
Ribonuclease PH domain 2-like Nucleic acid-binding proteins 11
DNA/RNA polymerases Lesion bypass DNA polymerase (Y-family), little finger domain 11
RuvA domain 2-like BRCT domain 11
MoeA N-terminal region -like Periplasmic binding protein-like II 11
Nucleic acid-binding proteins BRCT domain 11
2Fe-2S ferredoxin-like Ferredoxin reductase-like, C-terminal NADP-linked domain 11
PHP domain-like UDP-Glycosyltransferase/glycogen phosphorylase 11
Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 4Fe-4S ferredoxins 11
Class I glutamine amidotransferase-like Adenine nucleotide alpha hydrolases-like 11
DNA repair protein MutS, domain III SMR domain-like 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain II 11
UBA-like Elongation factor Ts (EF-Ts), dimerisation domain 11
GAF domain-like Histidine-containing phosphotransfer domain, HPT domain 11
Tetrapyrrole methylase S-adenosyl-L-methionine-dependent methyltransferases 11
Glycoside hydrolase/deacetylase UDP-Glycosyltransferase/glycogen phosphorylase 11
Glutamyl tRNA-reductase catalytic, N-terminal domain Glutamyl tRNA-reductase dimerization domain 11
ValRS/IleRS/LeuRS editing domain tRNA-binding arm 11
P-loop containing nucleoside triphosphate hydrolases Prokaryotic type KH domain (KH-domain type II) 11
Glutathione synthetase ATP-binding domain-like Phosphoenolpyruvate/pyruvate domain 11
Sensory domain-like Nucleotide cyclase 11
P-loop containing nucleoside triphosphate hydrolases Nitrogenase accessory factor-like 11
ThrRS/AlaRS common domain Class II aaRS ABD-related 11
"Winged helix" DNA-binding domain Chorismate lyase-like 11
Translation proteins Translation proteins 11
PIN domain-like 5' to 3' exonuclease, C-terminal subdomain 11
Type II DNA topoisomerase GyrA/ParC C-terminal domain-like 11
Calcium ATPase, transduction domain A Calcium ATPase, transmembrane domain M 11
CBS-domain pair FAD-binding/transporter-associated domain-like 11
N-terminal domain of MutM-like DNA repair proteins S13-like H2TH domain 11
Methylated DNA-protein cysteine methyltransferase domain Methylated DNA-protein cysteine methyltransferase, C-terminal domain 11
PTS system fructose IIA component-like Phosphohistidine domain 11
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphoenolpyruvate/pyruvate domain 11
Ribosomal protein S5 domain 2-like DNA mismatch repair protein MutL 11
Protein kinase-like (PK-like) CheY-like 11
ARM repeat TPR-like 11
PK beta-barrel domain-like Phosphoenolpyruvate/pyruvate domain 11
NAD(P)-binding Rossmann-fold domains 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
Cryptochrome/photolyase, N-terminal domain Cryptochrome/photolyase FAD-binding domain 11
Thiamin diphosphate-binding fold (THDP-binding) Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 11
EreA/ChaN-like PDZ domain-like 11
PLP-dependent transferases P-loop containing nucleoside triphosphate hydrolases 11
TPR-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
RuvA domain 2-like RuvA domain 2-like 11
Ribonuclease PH domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
PheT/TilS domain Anticodon-binding domain of PheRS 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase HSP90 C-terminal domain 11
Cytochrome c Multiheme cytochromes 11
Nucleic acid-binding proteins Anticodon-binding domain of PheRS 11
Homocysteine S-methyltransferase Cobalamin (vitamin B12)-binding domain 11
Translation initiation factor IF3, N-terminal domain Translation initiation factor IF3, C-terminal domain 11
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 11
Aldolase AFP III-like domain 11
RNase III domain-like dsRNA-binding domain-like 11
Eukaryotic type KH-domain (KH-domain type I) Nucleic acid-binding proteins 11
Aspartate/glutamate racemase Aspartate/glutamate racemase 11
P-loop containing nucleoside triphosphate hydrolases Ribonuclease H-like 11
MgtE N-terminal domain-like CBS-domain pair 11
Calcium-dependent phosphotriesterase Calcium-dependent phosphotriesterase 11
Rubredoxin-like Superoxide reductase-like 11
NAD(P)-binding Rossmann-fold domains Bet v1-like 11
DNA ligase/mRNA capping enzyme, catalytic domain Nucleic acid-binding proteins 11
Calcium-dependent phosphotriesterase CheY-like 11
5' to 3' exonuclease, C-terminal subdomain DNA/RNA polymerases 11
Nucleic acid-binding proteins ArfGap/RecO-like zinc finger 11
Carbon-nitrogen hydrolase Adenine nucleotide alpha hydrolases-like 11
Diaminopimelate epimerase-like Diaminopimelate epimerase-like 11
DHH phosphoesterases Nucleotidyltransferase 11
post-HMGL domain-like Single hybrid motif 11
Class II aaRS and biotin synthetases YbaK/ProRS associated domain 11
CheY-like SpoIIaa-like 11
Histidine-containing phosphotransfer domain, HPT domain EspE N-terminal domain-like 11
Bacterial fluorinating enzyme, N-terminal domain Bacterial fluorinating enzyme, C-terminal domain 11
Putative DNA-binding domain Class II aaRS and biotin synthetases 11
Glutathione synthetase ATP-binding domain-like Glutathione synthetase ATP-binding domain-like 11
CheC-like Surface presentation of antigens (SPOA) 11
P-loop containing nucleoside triphosphate hydrolases TPR-like 11
Nucleic acid-binding proteins CheY-like 11

Jump to [ Top of page · Add/remove domain pairs · Add/remove genomes · Domain combination pairs ]