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Domain combination pairs in Clostridium thermocellum ATCC 27405

All pairs of domain combinations at the superfamily level are listed here.
The identification of domain pairs does not account for the possibility of non-contiguous domains. Inserted, or interlaced, domains are seen as having a simple pair ordering.

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Adjacent domain pairs graph

Graph of adjacent domain pairs.


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Domain combination pairs

730 domain combination pairs.
Click on a column heading to sort that column, or the 'View' button to see domain architetures for that domain pair combination.

Superfamily (N) Superfamily (C) Number of occurrances Number unique
Homodimeric domain of signal transducing histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 2715
P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases 2714
Galactose-binding domain-like Type I dockerin domain 2421
(Trans)glycosidases Type I dockerin domain 2016
Six-hairpin glycosidases Type I dockerin domain 1710
Homeodomain-like Ribonuclease H-like 171
Actin-like ATPase domain Actin-like ATPase domain 154
Sigma2 domain of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 142
CheY-like C-terminal effector domain of the bipartite response regulators 131
(Trans)glycosidases Galactose-binding domain-like 1210
Carbohydrate-binding domain Type I dockerin domain 126
Six-hairpin glycosidases Carbohydrate-binding domain 126
NAD(P)-binding Rossmann-fold domains Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 114
P-loop containing nucleoside triphosphate hydrolases Translation proteins 97
ABC transporter transmembrane region P-loop containing nucleoside triphosphate hydrolases 92
Sigma3 and sigma4 domains of RNA polymerase sigma factors Ribonuclease H-like 91
P-loop containing nucleoside triphosphate hydrolases Ribosomal protein S5 domain 2-like 87
Thiamin diphosphate-binding fold (THDP-binding) TK C-terminal domain-like 84
Carbohydrate-binding domain Carbohydrate-binding domain 77
Galactose-binding domain-like Galactose-binding domain-like 77
HAMP domain-like Homodimeric domain of signal transducing histidine kinase 73
NAD(P)-binding Rossmann-fold domains 6-phosphogluconate dehydrogenase C-terminal domain-like 73
HAMP domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 73
Homeodomain-like Homeodomain-like 76
P-loop containing nucleoside triphosphate hydrolases EF-G C-terminal domain-like 64
Arabinanase/levansucrase/invertase Type I dockerin domain 66
Nucleotidylyl transferase Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 66
MurD-like peptide ligases, catalytic domain MurD-like peptide ligases, peptide-binding domain 64
Histidine-containing phosphotransfer domain, HPT domain Homodimeric domain of signal transducing histidine kinase 66
Histidine-containing phosphotransfer domain, HPT domain ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 66
Translation proteins EF-G C-terminal domain-like 64
Pectin lyase-like Type I dockerin domain 65
Nucleotide-diphospho-sugar transferases Trimeric LpxA-like enzymes 62
Composite domain of metallo-dependent hydrolases Metallo-dependent hydrolases 63
(Trans)glycosidases Glycosyl hydrolase domain 55
Homodimeric domain of signal transducing histidine kinase CheY-like 54
beta-lactamase/transpeptidase-like Penicillin-binding protein associated domain 52
EF-G C-terminal domain-like EF-G C-terminal domain-like 53
Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) 54
Class II aaRS and biotin synthetases Class II aaRS ABD-related 53
4Fe-4S ferredoxins Fe-only hydrogenase 53
TPR-like TPR-like 55
PYP-like sensor domain (PAS domain) Homodimeric domain of signal transducing histidine kinase 54
Chemotaxis receptor methyltransferase CheR, N-terminal domain S-adenosyl-L-methionine-dependent methyltransferases 52
PYP-like sensor domain (PAS domain) ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 54
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheY-like 54
P-loop containing nucleoside triphosphate hydrolases post-AAA+ oligomerization domain-like 42
CheY-like Methylesterase CheB, C-terminal domain 41
Aminopeptidase/glucanase lid domain Zn-dependent exopeptidases 41
Phosphoglucomutase, first 3 domains Phosphoglucomutase, C-terminal domain 43
Phosphoglucomutase, first 3 domains Phosphoglucomutase, first 3 domains 43
LysM domain LysM domain 44
Galactose-binding domain-like E set domains 44
Aminoacid dehydrogenase-like, N-terminal domain NAD(P)-binding Rossmann-fold domains 41
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Ribosomal protein S5 domain 2-like 43
Homodimeric domain of signal transducing histidine kinase CheW-like 44
E set domains Six-hairpin glycosidases 44
Histidine-containing phosphotransfer domain, HPT domain CheW-like 44
SGNH hydrolase Type I dockerin domain 44
Pectin lyase-like Galactose-binding domain-like 43
PurM N-terminal domain-like PurM C-terminal domain-like 42
EF-G C-terminal domain-like Ribosomal protein S5 domain 2-like 43
Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 41
Copper amine oxidase, domain N Copper amine oxidase, domain N 43
Calcium ATPase, transmembrane domain M HAD-like 43
P-loop containing nucleoside triphosphate hydrolases C-terminal domain of alpha and beta subunits of F1 ATP synthase 43
ACT-like ACT-like 42
Triger factor/SurA peptide-binding domain-like FKBP-like 44
E set domains Type I dockerin domain 44
PreATP-grasp domain Glutathione synthetase ATP-binding domain-like 43
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheW-like 44
Calcium ATPase, transduction domain A Calcium ATPase, transmembrane domain M 43
Nucleic acid-binding proteins Class II aaRS and biotin synthetases 43
Calcium ATPase, transduction domain A HAD-like 43
P-loop containing nucleoside triphosphate hydrolases MOP-like 41
Methyl-accepting chemotaxis protein (MCP) signaling domain Methyl-accepting chemotaxis protein (MCP) signaling domain 33
AbfB domain Arabinanase/levansucrase/invertase 33
Nucleic acid-binding proteins Nucleic acid-binding proteins 33
alpha/beta-Hydrolases Galactose-binding domain-like 33
CheY-binding domain of CheA CheW-like 33
ValRS/IleRS/LeuRS editing domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 33
Prim-pol domain P-loop containing nucleoside triphosphate hydrolases 31
CheY-binding domain of CheA Homodimeric domain of signal transducing histidine kinase 33
LuxS/MPP-like metallohydrolase LuxS/MPP-like metallohydrolase 31
PDZ domain-like Trypsin-like serine proteases 32
Nucleic acid-binding proteins RuvA domain 2-like 33
Formate/glycerate dehydrogenase catalytic domain-like NAD(P)-binding Rossmann-fold domains 32
Carboxypeptidase regulatory domain-like Type I dockerin domain 33
Translation proteins Ribosomal protein S5 domain 2-like 32
Glycosyl hydrolase domain Type I dockerin domain 33
Galactose mutarotase-like Six-hairpin glycosidases 33
CheY-like Homeodomain-like 32
Ribonuclease H-like DNA/RNA polymerases 32
CheY-binding domain of CheA ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 33
ParB/Sulfiredoxin S-adenosyl-L-methionine-dependent methyltransferases 31
Nucleic acid-binding proteins P-loop containing nucleoside triphosphate hydrolases 33
Penicillin binding protein dimerisation domain beta-lactamase/transpeptidase-like 33
AbfB domain Type I dockerin domain 33
E set domains (Trans)glycosidases 33
EsxAB dimer-like Quinoprotein alcohol dehydrogenase-like 33
Galactose-binding domain-like Six-hairpin glycosidases 33
NAD(P)-binding Rossmann-fold domains ACT-like 33
Alpha-L RNA-binding motif Pseudouridine synthase 31
alpha/beta-Hydrolases Type I dockerin domain 33
N-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase 32
ValRS/IleRS/LeuRS editing domain Nucleotidylyl transferase 33
lambda repressor-like DNA-binding domains Periplasmic binding protein-like I 31
P-loop containing nucleoside triphosphate hydrolases "Winged helix" DNA-binding domain 32
DNA repair protein MutS, domain III P-loop containing nucleoside triphosphate hydrolases 33
Fibronectin type III Fibronectin type III 33
Nucleotide cyclase HD-domain/PDEase-like 31
cAMP-binding domain-like "Winged helix" DNA-binding domain 31
Histidine-containing phosphotransfer domain, HPT domain CheY-binding domain of CheA 33
GAF domain-like Nucleotide cyclase 32
N-terminal domain of alpha and beta subunits of F1 ATP synthase P-loop containing nucleoside triphosphate hydrolases 32
FabD/lysophospholipase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 22
Trimeric LpxA-like enzymes Phosphoglucomutase, first 3 domains 21
"Winged helix" DNA-binding domain LexA/Signal peptidase 21
HMA, heavy metal-associated domain Calcium ATPase, transmembrane domain M 22
Glutathione synthetase ATP-binding domain-like Carbamoyl phosphate synthetase, large subunit connection domain 21
PreATP-grasp domain Methylglyoxal synthase-like 21
EspE N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 22
"Winged helix" DNA-binding domain Iron-dependent repressor protein, dimerization domain 21
Quinoprotein alcohol dehydrogenase-like Tricorn protease N-terminal domain 22
TK C-terminal domain-like 4Fe-4S ferredoxins 22
Glutamine synthetase/guanido kinase GatB/YqeY motif 21
Carbamoyl phosphate synthetase, small subunit N-terminal domain Class I glutamine amidotransferase-like 21
CheY-like GAF domain-like 22
Concanavalin A-like lectins/glucanases Type I dockerin domain 22
Fibronectin type III Type I dockerin domain 22
Protein kinase-like (PK-like) TPR-like 22
Nqo1 FMN-binding domain-like Nqo1 middle domain-like 21
Carbohydrate-binding domain vWA-like 22
Periplasmic binding protein-like II Periplasmic binding protein-like II 21
Nucleotidyltransferase Poly A polymerase C-terminal region-like 22
Phosphohistidine domain Phosphoenolpyruvate/pyruvate domain 22
Riboflavin synthase domain-like Ferredoxin reductase-like, C-terminal NADP-linked domain 22
Type II DNA topoisomerase GyrA/ParC C-terminal domain-like 21
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 22
Nicotinate/Quinolinate PRTase N-terminal domain-like Nicotinate/Quinolinate PRTase C-terminal domain-like 21
Nqo1C-terminal domain-like 4Fe-4S ferredoxins 21
Nqo1 middle domain-like 4Fe-4S ferredoxins 21
Zinc beta-ribbon DNA primase core 22
Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like 22
Thiamin diphosphate-binding fold (THDP-binding) DHS-like NAD/FAD-binding domain 21
HMA, heavy metal-associated domain HAD-like 22
Nucleic acid-binding proteins GAD domain-like 21
MurCD N-terminal domain MurD-like peptide ligases, peptide-binding domain 21
CheY-like CheY-like 22
Zn-dependent exopeptidases Bacterial exopeptidase dimerisation domain 21
Metal cation-transporting ATPase, ATP-binding domain N HAD-like 21
Metal cation-transporting ATPase, ATP-binding domain N Calcium ATPase, transmembrane domain M 21
alpha/beta-Hydrolases (Trans)glycosidases 22
Ribosomal protein S5 domain 2-like Ribonuclease PH domain 2-like 22
GAF domain-like HD-domain/PDEase-like 22
2Fe-2S ferredoxin-like Fe-only hydrogenase 21
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Type II DNA topoisomerase 21
Class II aaRS and biotin synthetases GAD domain-like 21
2Fe-2S ferredoxin-like 4Fe-4S ferredoxins 21
TGS-like P-loop containing nucleoside triphosphate hydrolases 22
Class II aaRS and biotin synthetases ThrRS/AlaRS common domain 22
E set domains Glycosyl hydrolase domain 22
CheC-like Surface presentation of antigens (SPOA) 22
MurE/MurF N-terminal domain MurD-like peptide ligases, catalytic domain 21
Aldolase AFP III-like domain 21
Nucleotide-diphospho-sugar transferases Phosphoglucomutase, first 3 domains 21
Copper amine oxidase, domain N Zn-dependent exopeptidases 22
Translation proteins SH3-like domain Nucleic acid-binding proteins 22
L30e-like alpha/beta knot 21
CheY-like HD-domain/PDEase-like 22
Nqo1 FMN-binding domain-like 4Fe-4S ferredoxins 21
TrkA C-terminal domain-like TrkA C-terminal domain-like 22
NAD(P)-binding Rossmann-fold domains LDH C-terminal domain-like 21
Copper amine oxidase, domain N TPR-like 22
GroES-like NAD(P)-binding Rossmann-fold domains 21
PLP-binding barrel Alanine racemase C-terminal domain-like 22
Hsp33 domain HSP33 redox switch-like 21
Thioredoxin-like Nqo1 FMN-binding domain-like 21
Thioredoxin-like FAD/NAD(P)-binding domain 22
Thiamin diphosphate-binding fold (THDP-binding) 4Fe-4S ferredoxins 22
NAD(P)-binding Rossmann-fold domains UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 21
PGBD-like PGBD-like 22
lambda repressor-like DNA-binding domains RmlC-like cupins 21
Creatinase/prolidase N-terminal domain Creatinase/aminopeptidase 21
Methionine synthase domain Cobalamin (vitamin B12)-binding domain 22
Double Clp-N motif P-loop containing nucleoside triphosphate hydrolases 21
Type I dockerin domain Type I dockerin domain 22
Arabinanase/levansucrase/invertase Galactose-binding domain-like 22
Type I dockerin domain Serpins 22
Nqo1 FMN-binding domain-like Nqo1C-terminal domain-like 21
Translation proteins EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 22
HMA, heavy metal-associated domain Calcium ATPase, transduction domain A 22
Nucleotidylyl transferase An anticodon-binding domain of class I aminoacyl-tRNA synthetases 21
P-loop containing nucleoside triphosphate hydrolases EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 22
"Winged helix" DNA-binding domain NAD(P)-binding Rossmann-fold domains 21
Ribosomal protein S5 domain 2-like Type II DNA topoisomerase 21
Carbohydrate-binding domain Galactose-binding domain-like 22
GAF domain-like Homodimeric domain of signal transducing histidine kinase 22
Glutathione synthetase ATP-binding domain-like Glutathione synthetase ATP-binding domain-like 21
Thioredoxin-like Nqo1C-terminal domain-like 21
EsxAB dimer-like Tricorn protease N-terminal domain 22
P-loop containing nucleoside triphosphate hydrolases Restriction endonuclease-like 22
FAD/NAD(P)-binding domain FAD/NAD(P)-binding domain 22
tRNA-binding arm Class II aaRS and biotin synthetases 21
MurE/MurF N-terminal domain MurD-like peptide ligases, peptide-binding domain 21
Thiolase-like Thiolase-like 22
PreATP-grasp domain Carbamoyl phosphate synthetase, large subunit connection domain 21
6-phosphogluconate dehydrogenase C-terminal domain-like UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 21
DNA methylase specificity domain DNA methylase specificity domain 22
4'-phosphopantetheinyl transferase 4'-phosphopantetheinyl transferase 21
Ricin B-like lectins Type I dockerin domain 22
Thioredoxin-like Nqo1 middle domain-like 21
Thioredoxin-like 4Fe-4S ferredoxins 21
Glutathione synthetase ATP-binding domain-like Methylglyoxal synthase-like 21
SGNH hydrolase SGNH hydrolase 22
CheY-like Histidine-containing phosphotransfer domain, HPT domain 22
GAF domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 22
Ferritin-like Rubredoxin-like 21
LysM domain L,D-transpeptidase catalytic domain-like 22
Concanavalin A-like lectins/glucanases Galactose-binding domain-like 22
PreATP-grasp domain PreATP-grasp domain 21
Trimeric LpxA-like enzymes Phosphoglucomutase, C-terminal domain 21
HAMP domain-like Methyl-accepting chemotaxis protein (MCP) signaling domain 22
Nqo1 middle domain-like Nqo1C-terminal domain-like 21
Aldolase 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 21
Calcium ATPase, transduction domain A Metal cation-transporting ATPase, ATP-binding domain N 21
TGS-like ThrRS/AlaRS common domain 22
N-utilization substance G protein NusG, N-terminal domain Translation proteins SH3-like domain 21
HAMP domain-like PYP-like sensor domain (PAS domain) 21
P-loop containing nucleoside triphosphate hydrolases Rad50 coiled-coil Zn hook 22
NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains 22
NAD(P)-binding Rossmann-fold domains TrkA C-terminal domain-like 22
PDZ domain-like ClpP/crotonase 22
Nucleotide-diphospho-sugar transferases Phosphoglucomutase, C-terminal domain 21
Glycosyl hydrolase domain Galactose-binding domain-like 22
RuvA domain 2-like P-loop containing nucleoside triphosphate hydrolases 22
MurCD N-terminal domain MurD-like peptide ligases, catalytic domain 21
"Winged helix" DNA-binding domain GntR ligand-binding domain-like 21
Formyltransferase FMT C-terminal domain-like 21
Carbamoyl phosphate synthetase, large subunit connection domain Methylglyoxal synthase-like 21
Class II aaRS and biotin synthetases YbaK/ProRS associated domain 11
HisI-like all-alpha NTP pyrophosphatases 11
Ribosomal protein S5 domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
GreA transcript cleavage protein, N-terminal domain FKBP-like 11
Type I dockerin domain Integrin alpha N-terminal domain 11
"Winged helix" DNA-binding domain Chorismate lyase-like 11
Radical SAM enzymes RuvA domain 2-like 11
"Winged helix" DNA-binding domain Actin-like ATPase domain 11
Ribosomal protein S5 domain 2-like Nucleic acid-binding proteins 11
Ribosomal protein L6 Ribosomal protein L6 11
Thiolase-like ACP-like 11
PYP-like sensor domain (PAS domain) PYP-like sensor domain (PAS domain) 11
PheT/TilS domain Class II aaRS and biotin synthetases 11
Oligoxyloglucan reducing end-specific cellobiohydrolase Type I dockerin domain 11
Fibronectin type III Starch-binding domain-like 11
Nucleotidylyl transferase Nucleic acid-binding proteins 11
ThrRS/AlaRS common domain P-loop containing nucleoside triphosphate hydrolases 11
DNA breaking-rejoining enzymes DNA breaking-rejoining enzymes 11
Glycosyl hydrolase domain AbfB domain 11
"Winged helix" DNA-binding domain Periplasmic binding protein-like II 11
Protein kinase-like (PK-like) GAF domain-like 11
Invasin/intimin cell-adhesion fragments Type I dockerin domain 11
Six-hairpin glycosidases PKD domain 11
DHH phosphoesterases Nucleotidyltransferase 11
Periplasmic binding protein-like II Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain 11
PurM C-terminal domain-like Class I glutamine amidotransferase-like 11
Periplasmic binding protein-like II vWA-like 11
Dihydropteroate synthetase-like Methionine synthase domain 11
E set domains Carbohydrate-binding domain 11
Homeodomain-like SIS domain 11
Copper amine oxidase, domain N Galactose-binding domain-like 11
Mechanosensitive channel protein MscS (YggB), transmembrane region Mechanosensitive channel protein MscS (YggB), C-terminal domain 11
Thioesterase/thiol ester dehydrase-isomerase Thioesterase/thiol ester dehydrase-isomerase 11
TATA-box binding protein-like DNA-glycosylase 11
Concanavalin A-like lectins/glucanases Glycoside hydrolase/deacetylase 11
Thioredoxin-like Thioredoxin-like 11
CBS-domain pair MgtE membrane domain-like 11
E set domains PKD domain 11
FliG FliG 11
Glutathione synthetase ATP-binding domain-like MurD-like peptide ligases, catalytic domain 11
UBA-like Elongation factor Ts (EF-Ts), dimerisation domain 11
PurM N-terminal domain-like PurM N-terminal domain-like 11
Nucleotidyltransferase TGS-like 11
PUA domain-like P-loop containing nucleoside triphosphate hydrolases 11
DHH phosphoesterases CBS-domain pair 11
Translation proteins Translation proteins 11
Tubulin nucleotide-binding domain-like Tubulin C-terminal domain-like 11
NAD(P)-linked oxidoreductase alpha-helical ferredoxin 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Adenine nucleotide alpha hydrolases-like 11
YVTN repeat-like/Quinoprotein amine dehydrogenase NHL repeat 11
NusB-like S-adenosyl-L-methionine-dependent methyltransferases 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
Translation proteins PRC-barrel domain 11
Ribonuclease H-like RuvA domain 2-like 11
Type I dockerin domain Glycoside hydrolase/deacetylase 11
Acylphosphatase/BLUF domain-like YrdC/RibB 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Nucleotidylyl transferase 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases tRNA-binding arm 11
(Trans)glycosidases Fibronectin type III 11
Arabinanase/levansucrase/invertase Ricin B-like lectins 11
UDP-Glycosyltransferase/glycogen phosphorylase Glycerol-3-phosphate (1)-acyltransferase 11
Copper amine oxidase, domain N C-type lectin-like 11
NAD(P)-binding Rossmann-fold domains 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
ValRS/IleRS/LeuRS editing domain tRNA-binding arm 11
(Trans)glycosidases Carboxypeptidase regulatory domain-like 11
Fucose-specific lectin Carboxypeptidase regulatory domain-like 11
"Winged helix" DNA-binding domain PLP-dependent transferases 11
Sensory domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
R1 subunit of ribonucleotide reductase, N-terminal domain PFL-like glycyl radical enzymes 11
TK C-terminal domain-like Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 11
PGBD-like Zn-dependent exopeptidases 11
Ribosomal protein S5 domain 2-like HSP90 C-terminal domain 11
Copper amine oxidase, domain N (Trans)glycosidases 11
PIN domain-like DNA/RNA polymerases 11
Actin-like ATPase domain HD-domain/PDEase-like 11
P-loop containing nucleoside triphosphate hydrolases Pre-protein crosslinking domain of SecA 11
MesJ substrate recognition domain-like PheT/TilS domain 11
Molybdenum cofactor biosynthesis proteins CinA-like 11
Fe-only hydrogenase PYP-like sensor domain (PAS domain) 11
L9 N-domain-like Ribosomal protein L9 C-domain 11
MetI-like MetI-like 11
P-loop containing nucleoside triphosphate hydrolases Class I glutamine amidotransferase-like 11
Galactose-binding domain-like Fibronectin type III 11
DNA/RNA polymerases Lesion bypass DNA polymerase (Y-family), little finger domain 11
Nucleic acid-binding proteins Anticodon-binding domain of PheRS 11
Tropomyosin ARM repeat 11
P-loop containing nucleoside triphosphate hydrolases RecA protein, C-terminal domain 11
Riboflavin synthase domain-like Riboflavin synthase domain-like 11
FabD/lysophospholipase-like NAD(P)-binding Rossmann-fold domains 11
P-loop containing nucleoside triphosphate hydrolases FtsH protease domain-like 11
2Fe-2S ferredoxin-like Nucleotide-binding domain 11
Homocysteine S-methyltransferase Cobalamin (vitamin B12)-binding domain 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain II 11
Lamin A/C globular tail domain Lamin A/C globular tail domain 11
Periplasmic binding protein-like II PYP-like sensor domain (PAS domain) 11
Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 4Fe-4S ferredoxins 11
IlvD/EDD N-terminal domain-like LeuD/IlvD-like 11
Cell wall binding repeat Cell wall binding repeat 11
Fucose-specific lectin Type I dockerin domain 11
Prokaryotic type KH domain (KH-domain type II) R3H domain 11
Glycosyl hydrolase domain PKD domain 11
Ribosomal protein L7/12, oligomerisation (N-terminal) domain ClpS-like 11
PIN domain-like Ribonuclease H-like 11
RCC1/BLIP-II RCC1/BLIP-II 11
Thiamin pyrophosphokinase, catalytic domain Thiamin pyrophosphokinase, substrate-binding domain 11
Putative DNA-binding domain Anticodon-binding domain of PheRS 11
TROVE domain-like vWA-like 11
4Fe-4S ferredoxins FMN-linked oxidoreductases 11
CBS-domain pair Inosine monophosphate dehydrogenase (IMPDH) 11
"Winged helix" DNA-binding domain Class II aaRS and biotin synthetases 11
Class II aaRS and biotin synthetases Translation proteins 11
TGS-like ACT-like 11
Tex N-terminal region-like Ribonuclease H-like 11
DeoB insert domain-like Alkaline phosphatase-like 11
Galactose-binding domain-like vWA-like 11
RBP11-like subunits of RNA polymerase C-terminal domain of RNA polymerase alpha subunit 11
FMN-binding split barrel Rubredoxin-like 11
ThrRS/AlaRS common domain Class II aaRS ABD-related 11
Methylated DNA-protein cysteine methyltransferase domain Methylated DNA-protein cysteine methyltransferase, C-terminal domain 11
Nucleic acid-binding proteins ArfGap/RecO-like zinc finger 11
YhbC-like, N-terminal domain YhbC-like, C-terminal domain 11
DNA repair protein MutS, domain II DNA repair protein MutS, domain III 11
FMN-linked oxidoreductases FAD/NAD(P)-binding domain 11
Homo-oligomeric flavin-containing Cys decarboxylases, HFCD CoaB-like 11
LysM domain (Trans)glycosidases 11
Thiolase-like NAD(P)-binding Rossmann-fold domains 11
PEP carboxykinase N-terminal domain PEP carboxykinase-like 11
Glycosyl hydrolase domain Arabinanase/levansucrase/invertase 11
HD-domain/PDEase-like Nucleotidyltransferase 11
Prokaryotic type KH domain (KH-domain type II) Prokaryotic type KH domain (KH-domain type II) 11
P-loop containing nucleoside triphosphate hydrolases Metallo-dependent phosphatases 11
Thiolase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 11
LigB-like AMMECR1-like 11
PDZ domain-like Radical SAM enzymes 11
RuvA domain 2-like RuvA domain 2-like 11
Flavoproteins SCP-like 11
DNA ligase/mRNA capping enzyme, catalytic domain BRCT domain 11
DnaD domain-like DnaD domain-like 11
Insert subdomain of RNA polymerase alpha subunit RBP11-like subunits of RNA polymerase 11
Dihydropteroate synthetase-like Cobalamin (vitamin B12)-binding domain 11
Pectin lyase-like Pectin lyase-like 11
Homeodomain-like Probable bacterial effector-binding domain 11
PUA domain-like S-adenosyl-L-methionine-dependent methyltransferases 11
Insert subdomain of RNA polymerase alpha subunit C-terminal domain of RNA polymerase alpha subunit 11
Carbohydrate-binding domain Concanavalin A-like lectins/glucanases 11
DNA repair protein MutS, domain III SMR domain-like 11
Sm-like ribonucleoproteins Mechanosensitive channel protein MscS (YggB), C-terminal domain 11
P-loop containing nucleoside triphosphate hydrolases SMR domain-like 11
Oligoxyloglucan reducing end-specific cellobiohydrolase Oligoxyloglucan reducing end-specific cellobiohydrolase 11
Eukaryotic type KH-domain (KH-domain type I) Nucleic acid-binding proteins 11
Zn-dependent exopeptidases Sporulation related repeat 11
RuvA domain 2-like BRCT domain 11
Tricorn protease N-terminal domain Copper amine oxidase, domain N 11
PIN domain-like P-loop containing nucleoside triphosphate hydrolases 11
TGS-like Class II aaRS ABD-related 11
Probable ACP-binding domain of malonyl-CoA ACP transacylase ACP-like 11
lambda repressor-like DNA-binding domains LexA/Signal peptidase 11
Fe,Mn superoxide dismutase (SOD), N-terminal domain Fe,Mn superoxide dismutase (SOD), C-terminal domain 11
Cation efflux protein transmembrane domain-like Cation efflux protein cytoplasmic domain-like 11
Carbon-nitrogen hydrolase Adenine nucleotide alpha hydrolases-like 11
Urease metallochaperone UreE, N-terminal domain Urease metallochaperone UreE, C-terminal domain 11
Ribosomal protein S5 domain 2-like GHMP Kinase, C-terminal domain 11
"Winged helix" DNA-binding domain "Winged helix" DNA-binding domain 11
Multidrug resistance efflux transporter EmrE Multidrug resistance efflux transporter EmrE 11
Resolvase-like Homeodomain-like 11
Tex N-terminal region-like Nucleic acid-binding proteins 11
GIY-YIG endonuclease RuvA domain 2-like 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases Nucleic acid-binding proteins 11
EsxAB dimer-like NHL repeat 11
Nucleic acid-binding proteins PheT/TilS domain 11
P-loop containing nucleoside triphosphate hydrolases C-terminal UvrC-binding domain of UvrB 11
PYP-like sensor domain (PAS domain) EAL domain-like 11
DNA clamp DNA clamp 11
Nucleic acid-binding proteins Putative DNA-binding domain 11
EspE N-terminal domain-like EspE N-terminal domain-like 11
Tetrapyrrole methylase HemD-like 11
Nucleic acid-binding proteins DNA helicase RuvA subunit, C-terminal domain 11
YojJ-like RuvA domain 2-like 11
Galactose-binding domain-like SGNH hydrolase 11
Nucleotidylyl transferase Alpha-L RNA-binding motif 11
UDP-Glycosyltransferase/glycogen phosphorylase UDP-Glycosyltransferase/glycogen phosphorylase 11
5' to 3' exonuclease, C-terminal subdomain Ribonuclease H-like 11
FAD-binding/transporter-associated domain-like Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain 11
Eukaryotic type KH-domain (KH-domain type I) HD-domain/PDEase-like 11
P-loop containing nucleoside triphosphate hydrolases CarD-like 11
CarD-like TRCF domain-like 11
Nitrite/Sulfite reductase N-terminal domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 11
5' to 3' exonuclease, C-terminal subdomain DNA/RNA polymerases 11
LysM domain PR-1-like 11
MgtE N-terminal domain-like CBS-domain pair 11
PheT/TilS domain Anticodon-binding domain of PheRS 11
P-loop containing nucleoside triphosphate hydrolases GAF domain-like 11
YbaK/ProRS associated domain Class II aaRS ABD-related 11
Fibronectin type III Serpins 11
Bacillus cereus metalloprotein-like Bacillus cereus metalloprotein-like 11
CheY-like PYP-like sensor domain (PAS domain) 11
YrdC/RibB Actin-like ATPase domain 11
Coiled-coil domain of nucleotide exchange factor GrpE Head domain of nucleotide exchange factor GrpE 11
TPR-like ClpP/crotonase 11
Transcription factor NusA, N-terminal domain Prokaryotic type KH domain (KH-domain type II) 11
Nucleic acid-binding proteins Prokaryotic type KH domain (KH-domain type II) 11
Ribosomal L11/L12e N-terminal domain Ribosomal protein L11, C-terminal domain 11
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Pyrimidine nucleoside phosphorylase C-terminal domain 11
FabD/lysophospholipase-like ACP-like 11
Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain 11
TPR-like GAF domain-like 11
Adenine nucleotide alpha hydrolases-like Argininosuccinate synthetase, C-terminal domain 11
Prokaryotic type I DNA topoisomerase Zinc beta-ribbon 11
Glucocorticoid receptor-like (DNA-binding domain) P-loop containing nucleoside triphosphate hydrolases 11
"Winged helix" DNA-binding domain Dimeric alpha+beta barrel 11
Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain Pyrimidine nucleoside phosphorylase C-terminal domain 11
Thioredoxin-like Six-hairpin glycosidases 11
beta-lactamase/transpeptidase-like Penicillin-binding protein 2x (pbp-2x), c-terminal domain 11
Regulatory protein AraC Homeodomain-like 11
P-loop containing nucleoside triphosphate hydrolases TrpR-like 11
E set domains E set domains 11
Nucleotidylyl transferase tRNA-binding arm 11
Chaperone J-domain DnaJ/Hsp40 cysteine-rich domain 11
GroEL equatorial domain-like GroEL apical domain-like 11
Acylphosphatase/BLUF domain-like Actin-like ATPase domain 11
Subtilisin-like Type I dockerin domain 11
Invasin/intimin cell-adhesion fragments Fucose-specific lectin 11
P-loop containing nucleoside triphosphate hydrolases Initiation factor IF2/eIF5b, domain 3 11
Probable ACP-binding domain of malonyl-CoA ACP transacylase NAD(P)-binding Rossmann-fold domains 11
TGS-like Class II aaRS and biotin synthetases 11
Obg GTP-binding protein N-terminal domain P-loop containing nucleoside triphosphate hydrolases 11
DnaJ/Hsp40 cysteine-rich domain HSP40/DnaJ peptide-binding domain 11
HD-domain/PDEase-like ACT-like 11
Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 11
Translation initiation factor IF3, N-terminal domain Translation initiation factor IF3, C-terminal domain 11
Toll/Interleukin receptor TIR domain Trypsin-like serine proteases 11
P-loop containing nucleoside triphosphate hydrolases Obg GTP-binding protein C-terminal domain 11
Actin-like ATPase domain Heat shock protein 70kD (HSP70), peptide-binding domain 11
Ammonium transporter GlnB-like 11
Metallo-hydrolase/oxidoreductase Flavoproteins 11
Triger factor/SurA peptide-binding domain-like TPR-like 11
CoA-dependent acyltransferases Acetyl-CoA synthetase-like 11
RuvA domain 2-like DNA helicase RuvA subunit, C-terminal domain 11
alpha/beta-Hydrolases MFS general substrate transporter 11
S-adenosyl-L-methionine-dependent methyltransferases Putative methyltransferase TM0872, insert domain 11
CheY-like PP2C-like 11
Trigger factor ribosome-binding domain FKBP-like 11
Nudix "Winged helix" DNA-binding domain 11
LysM domain Zn-dependent exopeptidases 11
Ricin B-like lectins Fibronectin type III 11
PRC-barrel domain PRC-barrel domain 11
PKD domain PKD domain 11
Ribonuclease PH domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
PIN domain-like 5' to 3' exonuclease, C-terminal subdomain 11
Domain of the SRP/SRP receptor G-proteins P-loop containing nucleoside triphosphate hydrolases 11
P-loop containing nucleoside triphosphate hydrolases Nucleotide cyclase 11
Flavoproteins Flavoproteins 11
Periplasmic binding protein-like II EAL domain-like 11
Protein kinase-like (PK-like) Tricorn protease N-terminal domain 11
Galactose mutarotase-like Galactose mutarotase-like 11
CheY-like Nucleotide cyclase 11
4Fe-4S ferredoxins Radical SAM enzymes 11
PDZ domain-like PDZ domain-like 11
PYP-like sensor domain (PAS domain) PP2C-like 11
P-loop containing nucleoside triphosphate hydrolases TRCF domain-like 11
"Winged helix" DNA-binding domain Thioesterase/thiol ester dehydrase-isomerase 11
Prokaryotic type KH domain (KH-domain type II) Ribosomal protein S3 C-terminal domain 11
(Trans)glycosidases Chitinase insertion domain 11
Adenine nucleotide alpha hydrolases-like PheT/TilS domain 11
ParB/Sulfiredoxin KorB DNA-binding domain-like 11
CorA soluble domain-like Magnesium transport protein CorA, transmembrane region 11
Flavoproteins 4Fe-4S ferredoxins 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
YrdC/RibB RibA-like 11
Nucleic acid-binding proteins BRCT domain 11
Epsilon subunit of F1F0-ATP synthase N-terminal domain Epsilon subunit of F1F0-ATP synthase C-terminal domain 11
Sensory domain-like HAMP domain-like 11
CoA-dependent acyltransferases CoA-dependent acyltransferases 11
TSP type-3 repeat TSP type-3 repeat 11
SH3-domain Cysteine proteinases 11
(Trans)glycosidases Arabinanase/levansucrase/invertase 11
Purple acid phosphatase, N-terminal domain Type I dockerin domain 11
P-loop containing nucleoside triphosphate hydrolases Helical scaffold and wing domains of SecA 11
Rhomboid-like TPR-like 11
"Winged helix" DNA-binding domain PRTase-like 11
PreATP-grasp domain Rudiment single hybrid motif 11
GroEL equatorial domain-like GroEL-intermediate domain like 11
Class II aaRS and biotin synthetases Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) 11
Ribonuclease PH domain 2-like Nucleic acid-binding proteins 11
CBS-domain pair Poly A polymerase C-terminal region-like 11
Putative DNA-binding domain Class II aaRS and biotin synthetases 11
HprK N-terminal domain-like PEP carboxykinase-like 11
Enolase N-terminal domain-like Enolase C-terminal domain-like 11
AbrB/MazE/MraZ-like GAF domain-like 11
Nucleotidylyl transferase Riboflavin kinase-like 11
Invasin/intimin cell-adhesion fragments Invasin/intimin cell-adhesion fragments 11
Purple acid phosphatase, N-terminal domain Serpins 11
Integrin alpha N-terminal domain TPR-like 11
DNA ligase/mRNA capping enzyme, catalytic domain Nucleic acid-binding proteins 11
N-terminal domain of DnaB helicase P-loop containing nucleoside triphosphate hydrolases 11
Lysozyme-like beta-lactamase/transpeptidase-like 11
S-adenosyl-L-methionine-dependent methyltransferases S-adenosyl-L-methionine-dependent methyltransferases 11
HAD-like Acyl-CoA N-acyltransferases (Nat) 11
"Winged helix" DNA-binding domain NagB/RpiA/CoA transferase-like 11
ACP-like ACP-like 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase DNA mismatch repair protein MutL 11
Homeodomain-like Tetracyclin repressor-like, C-terminal domain 11
Acetyl-CoA synthetase-like ACP-like 11
RuvA domain 2-like MCP/YpsA-like 11
P-loop containing nucleoside triphosphate hydrolases TPR-like 11
TPR-like Protein prenylyltransferase 11
Carbohydrate-binding domain (Trans)glycosidases 11
Glutathione synthetase ATP-binding domain-like Phosphohistidine domain 11
GIY-YIG endonuclease C-terminal UvrC-binding domain of UvrB 11
Glutathione synthetase ATP-binding domain-like Phosphoenolpyruvate/pyruvate domain 11
Nucleotide-binding domain ISP domain 11
(Trans)glycosidases Beta-D-glucan exohydrolase, C-terminal domain 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain III 11
Nucleotide cyclase BAS1536-like 11
Fibronectin type III PKD domain 11
GroEL-intermediate domain like GroEL apical domain-like 11
Collagen-binding domain Copper amine oxidase, domain N 11
Calcium-dependent phosphotriesterase C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase 11
dsRNA-binding domain-like Ribosomal protein S5 domain 2-like 11
Acetyl-CoA synthetase-like alpha/beta-Hydrolases 11
PKD domain Starch-binding domain-like 11
PurM N-terminal domain-like Class I glutamine amidotransferase-like 11
ACP-like NAD(P)-binding Rossmann-fold domains 11
6-phosphogluconate dehydrogenase C-terminal domain-like ACT-like 11
Penicillin-binding protein 2x (pbp-2x), c-terminal domain Penicillin-binding protein 2x (pbp-2x), c-terminal domain 11
PLP-dependent transferases Ornithine decarboxylase C-terminal domain 11
SMAD/FHA domain SMAD/FHA domain 11
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 11
L,D-transpeptidase catalytic domain-like PGBD-like 11
Nucleic acid-binding proteins S-adenosyl-L-methionine-dependent methyltransferases 11
Glutamine synthetase, N-terminal domain Glutamine synthetase/guanido kinase 11
P-loop containing nucleoside triphosphate hydrolases DNA ligase/mRNA capping enzyme, catalytic domain 11
Thiolase-like FabD/lysophospholipase-like 11
CoA-dependent acyltransferases MFS general substrate transporter 11
P-loop containing nucleoside triphosphate hydrolases Signal peptide-binding domain 11
Tricorn protease N-terminal domain ClpP/crotonase 11
Dihydropteroate synthetase-like Nitrite and sulphite reductase 4Fe-4S domain-like 11
P-loop containing nucleoside triphosphate hydrolases Prokaryotic type KH domain (KH-domain type II) 11
Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases 11
Penicillin binding protein dimerisation domain Penicillin-binding protein 2x (pbp-2x), c-terminal domain 11
Nucleotidylyl transferase P-loop containing nucleoside triphosphate hydrolases 11
PYP-like sensor domain (PAS domain) GAF domain-like 11
DHH phosphoesterases Poly A polymerase C-terminal region-like 11
PUA domain-like alpha/beta knot 11
Actin-like ATPase domain Heat shock protein 70kD (HSP70), C-terminal subdomain 11
Class II aaRS and biotin synthetases C-terminal domain of transcriptional repressors 11
Sensory domain-like Homodimeric domain of signal transducing histidine kinase 11
Galactose-binding domain-like Integrin alpha N-terminal domain 11
PYP-like sensor domain (PAS domain) Nucleotide cyclase 11
Sensory domain-like Sensory domain-like 11
N-acetylmuramoyl-L-alanine amidase-like LysM domain 11
Calcium-dependent phosphotriesterase Type I dockerin domain 11
Metallo-dependent phosphatases DNA ligase/mRNA capping enzyme, catalytic domain 11
Class I glutamine amidotransferase-like Adenine nucleotide alpha hydrolases-like 11
Obg GTP-binding protein N-terminal domain Obg GTP-binding protein C-terminal domain 11
Ribonuclease H-like Nucleic acid-binding proteins 11
Glutamyl tRNA-reductase catalytic, N-terminal domain NAD(P)-binding Rossmann-fold domains 11
NHL repeat Tricorn protease N-terminal domain 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase HSP90 C-terminal domain 11
F1F0 ATP synthase subunit C F1F0 ATP synthase subunit C 11
ClpP/crotonase PGBD-like 11
PurM C-terminal domain-like PurM C-terminal domain-like 11
Acetyl-CoA synthetase-like MFS general substrate transporter 11
Homocysteine S-methyltransferase Dihydropteroate synthetase-like 11
CBS-domain pair Nucleotidyltransferase 11
PUA domain-like Ribosomal protein S5 domain 2-like 11
Periplasmic binding protein-like II Nucleotide cyclase 11
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 11
MgtE N-terminal domain-like MgtE membrane domain-like 11
Transcription factor NusA, N-terminal domain Nucleic acid-binding proteins 11
Quinoprotein alcohol dehydrogenase-like Quinoprotein alcohol dehydrogenase-like 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) Translation proteins 11
(Trans)glycosidases AbfB domain 11
CBS-domain pair FAD-binding/transporter-associated domain-like 11
Collagen-binding domain Collagen-binding domain 11
NAD(P)-linked oxidoreductase 4Fe-4S ferredoxins 11
Homocysteine S-methyltransferase Methionine synthase domain 11
Mechanosensitive channel protein MscS (YggB), transmembrane region Sm-like ribonucleoproteins 11
RuvA domain 2-like JAB1/MPN domain 11
Nucleotide-diphospho-sugar transferases S-adenosyl-L-methionine-dependent methyltransferases 11
(Trans)glycosidases Ricin B-like lectins 11
Eukaryotic type KH-domain (KH-domain type I) P-loop containing nucleoside triphosphate hydrolases 11
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphohistidine domain 11
4Fe-4S ferredoxins PYP-like sensor domain (PAS domain) 11
PHP domain-like RuvA domain 2-like 11
Xylose isomerase-like Acetyl-CoA synthetase-like 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain ACT-like 11
ALDH-like Dehydroquinate synthase-like 11
Hedgehog/intein (Hint) domain Homing endonucleases 11
Periplasmic binding protein-like II ACT-like 11
Galactose-binding domain-like PKD domain 11
Acyl-CoA N-acyltransferases (Nat) Acyl-CoA N-acyltransferases (Nat) 11
4Fe-4S ferredoxins Nitrite and sulphite reductase 4Fe-4S domain-like 11
DNA repair protein MutS, domain II P-loop containing nucleoside triphosphate hydrolases 11
FAD/NAD(P)-binding domain HI0933 insert domain-like 11
Methylglyoxal synthase-like Cytidine deaminase-like 11
Ribonuclease PH domain 2-like Ribonuclease PH domain 2-like 11
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 Eukaryotic type KH-domain (KH-domain type I) 11
Tricorn protease N-terminal domain Galactose-binding domain-like 11
Ribosomal protein S5 domain 2-like DNA mismatch repair protein MutL 11
Periplasmic binding protein-like I ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Invasin/intimin cell-adhesion fragments alpha/beta-Hydrolases 11
all-alpha NTP pyrophosphatases all-alpha NTP pyrophosphatases 11
YjeF N-terminal domain-like Ribokinase-like 11
Aconitase iron-sulfur domain LeuD/IlvD-like 11
Heat shock protein 70kD (HSP70), peptide-binding domain Heat shock protein 70kD (HSP70), C-terminal subdomain 11
C-terminal UvrC-binding domain of UvrB RuvA domain 2-like 11
FKBP-like TPR-like 11
"Winged helix" DNA-binding domain C-terminal domain of transcriptional repressors 11
Nitrite/Sulfite reductase N-terminal domain-like 4Fe-4S ferredoxins 11
"Winged helix" DNA-binding domain GAF domain-like 11
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 Nucleic acid-binding proteins 11
Chitinase insertion domain Type I dockerin domain 11
Alpha-L RNA-binding motif S-adenosyl-L-methionine-dependent methyltransferases 11
Trigger factor ribosome-binding domain Triger factor/SurA peptide-binding domain-like 11
S-adenosylmethionine synthetase S-adenosylmethionine synthetase 11
Carbohydrate-binding domain Carboxypeptidase regulatory domain-like 11
Protein kinase-like (PK-like) P-loop containing nucleoside triphosphate hydrolases 11
Phospholipase D/nuclease Phospholipase D/nuclease 11
Galactose-binding domain-like Glycoside hydrolase/deacetylase 11
Aldolase post-HMGL domain-like 11
Rho N-terminal domain-like Nucleic acid-binding proteins 11
Copper amine oxidase, domain N ClpP/crotonase 11
P-loop containing nucleoside triphosphate hydrolases Smc hinge domain 11
(Trans)glycosidases (Trans)glycosidases 11
THUMP domain-like Adenine nucleotide alpha hydrolases-like 11
Invasin/intimin cell-adhesion fragments Carboxypeptidase regulatory domain-like 11
Cytidine deaminase-like Dihydrofolate reductase-like 11
(Trans)glycosidases SGNH hydrolase 11
PDZ domain-like PGBD-like 11
Six-hairpin glycosidases (Trans)glycosidases 11
Glutathione synthetase ATP-binding domain-like MurD-like peptide ligases, peptide-binding domain 11
Adenine nucleotide alpha hydrolases-like MesJ substrate recognition domain-like 11
DNA repair protein MutS, domain I P-loop containing nucleoside triphosphate hydrolases 11
Copper amine oxidase, domain N Carbohydrate-binding domain 11
Type I dockerin domain PKD domain 11
Nucleotide-diphospho-sugar transferases TPR-like 11
SMAD/FHA domain P-loop containing nucleoside triphosphate hydrolases 11
TPR-like Nucleotide cyclase 11
Nucleotide cyclase EAL domain-like 11
Galactose-binding domain-like Ricin B-like lectins 11
PGBD-like LysM domain 11
Aspartate/glutamate racemase Aspartate/glutamate racemase 11
Glutathione synthetase ATP-binding domain-like Rudiment single hybrid motif 11
Type I dockerin domain RCC1/BLIP-II 11
DNA ligase/mRNA capping enzyme, catalytic domain RuvA domain 2-like 11
Galactose-binding domain-like Carboxypeptidase regulatory domain-like 11
Radical SAM enzymes TPR-like 11
alpha-helical ferredoxin Nucleotide-binding domain 11
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphoenolpyruvate/pyruvate domain 11
Pre-protein crosslinking domain of SecA Helical scaffold and wing domains of SecA 11
2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain Alkaline phosphatase-like 11
Thiamin diphosphate-binding fold (THDP-binding) Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 11
Chaperone J-domain HSP40/DnaJ peptide-binding domain 11
Nqo1 FMN-binding domain-like alpha-helical ferredoxin 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) ThrRS/AlaRS common domain 11
Rho N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 11
Ribosomal protein S5 domain 2-like Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 11
Six-hairpin glycosidases Glycosyl hydrolase domain 11
Nucleotidyltransferase ACT-like 11
PYP-like sensor domain (PAS domain) Histidine-containing phosphotransfer domain, HPT domain 11
Formate/glycerate dehydrogenase catalytic domain-like ACT-like 11
HD-domain/PDEase-like TGS-like 11
Class II aaRS and biotin synthetases Anticodon-binding domain of PheRS 11
"Winged helix" DNA-binding domain C-terminal domain of arginine repressor 11
NHL repeat Quinoprotein alcohol dehydrogenase-like 11
Galactose-binding domain-like ClpP/crotonase 11
ClpP/crotonase ClpP/crotonase 11
(Trans)glycosidases PKD domain 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) PRTase-like 11
Type I dockerin domain RNI-like 11
Outer membrane efflux proteins (OEP) Duplicated hybrid motif 11
Nucleotidylyl transferase Ribosomal protein L25-like 11
DnaK suppressor protein DksA, alpha-hairpin domain Glucocorticoid receptor-like (DNA-binding domain) 11
PheT/TilS domain Putative DNA-binding domain 11
Ribonuclease PH domain 2-like Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 11
Protein kinase-like (PK-like) Nucleotide cyclase 11
Anthrax protective antigen Anthrax protective antigen 11
RNase III domain-like dsRNA-binding domain-like 11
HSP40/DnaJ peptide-binding domain HSP40/DnaJ peptide-binding domain 11
Tex N-terminal region-like RuvA domain 2-like 11
Copper amine oxidase, domain N PR-1-like 11
vWA-like PGBD-like 11
Carbamate kinase-like ACT-like 11
Translation proteins ThrRS/AlaRS common domain 11
Translation proteins Initiation factor IF2/eIF5b, domain 3 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) SIS domain 11
CoA-dependent acyltransferases alpha/beta-Hydrolases 11
Lamin A/C globular tail domain Type I dockerin domain 11
S-adenosyl-L-methionine-dependent methyltransferases NAD(P)-binding Rossmann-fold domains 11

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