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Domain combination pairs in Bordetella petrii DSM 12804

All pairs of domain combinations at the superfamily level are listed here.
The identification of domain pairs does not account for the possibility of non-contiguous domains. Inserted, or interlaced, domains are seen as having a simple pair ordering.

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Adjacent domain pairs graph

Graph of adjacent domain pairs.


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Domain combination pairs

720 domain combination pairs.
Click on a column heading to sort that column, or the 'View' button to see domain architetures for that domain pair combination.

Superfamily (N) Superfamily (C) Number of occurrances Number unique
"Winged helix" DNA-binding domain Periplasmic binding protein-like II 1222
P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases 3516
Acyl-CoA dehydrogenase NM domain-like Acyl-CoA dehydrogenase C-terminal domain-like 325
Thioredoxin-like GST C-terminal domain-like 291
NAD(P)-binding Rossmann-fold domains 6-phosphogluconate dehydrogenase C-terminal domain-like 285
"Winged helix" DNA-binding domain GAF domain-like 261
Homodimeric domain of signal transducing histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 2511
Homeodomain-like Tetracyclin repressor-like, C-terminal domain 253
Homeodomain-like Homeodomain-like 227
"Winged helix" DNA-binding domain GntR ligand-binding domain-like 222
Multidrug resistance efflux transporter EmrE Multidrug resistance efflux transporter EmrE 222
Thiolase-like Thiolase-like 172
Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) 167
FAD/NAD(P)-binding domain FAD-linked reductases, C-terminal domain 164
CheY-like C-terminal effector domain of the bipartite response regulators 142
Formate/glycerate dehydrogenase catalytic domain-like NAD(P)-binding Rossmann-fold domains 143
Zn-dependent exopeptidases Bacterial exopeptidase dimerisation domain 141
GroES-like NAD(P)-binding Rossmann-fold domains 143
"Winged helix" DNA-binding domain Dimeric alpha+beta barrel 131
Riboflavin synthase domain-like Ferredoxin reductase-like, C-terminal NADP-linked domain 139
ABC transporter transmembrane region P-loop containing nucleoside triphosphate hydrolases 124
Sigma2 domain of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 114
Actin-like ATPase domain Actin-like ATPase domain 114
NAD(P)-binding Rossmann-fold domains Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 104
Enolase N-terminal domain-like Enolase C-terminal domain-like 102
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB transmembrane domain 107
PreATP-grasp domain Glutathione synthetase ATP-binding domain-like 105
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB transmembrane domain 96
PYP-like sensor domain (PAS domain) ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 97
"Winged helix" DNA-binding domain PLP-dependent transferases 92
PYP-like sensor domain (PAS domain) Homodimeric domain of signal transducing histidine kinase 97
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 96
P-loop containing nucleoside triphosphate hydrolases MOP-like 91
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 96
FAD/NAD(P)-binding domain FAD/NAD-linked reductases, dimerisation (C-terminal) domain 94
P-loop containing nucleoside triphosphate hydrolases Translation proteins 95
Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain 96
Cytochrome c Cytochrome c 93
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 85
NAD(P)-binding Rossmann-fold domains Succinyl-CoA synthetase domains 83
Succinyl-CoA synthetase domains Succinyl-CoA synthetase domains 83
Succinyl-CoA synthetase domains Glutathione synthetase ATP-binding domain-like 83
Thiamin diphosphate-binding fold (THDP-binding) DHS-like NAD/FAD-binding domain 81
P-loop containing nucleoside triphosphate hydrolases Homeodomain-like 86
"Winged helix" DNA-binding domain Chorismate lyase-like 83
MurD-like peptide ligases, catalytic domain MurD-like peptide ligases, peptide-binding domain 74
IlvD/EDD N-terminal domain-like LeuD/IlvD-like 71
FAD-binding/transporter-associated domain-like FAD-linked oxidases, C-terminal domain 74
ISP domain Bet v1-like 73
Formate dehydrogenase/DMSO reductase, domains 1-3 ADC-like 74
PreATP-grasp domain Rudiment single hybrid motif 73
NAD(P)-binding Rossmann-fold domains Glutathione synthetase ATP-binding domain-like 72
Composite domain of metallo-dependent hydrolases Metallo-dependent hydrolases 73
Glutathione synthetase ATP-binding domain-like Rudiment single hybrid motif 73
Thiamin diphosphate-binding fold (THDP-binding) TK C-terminal domain-like 64
Nucleotidylyl transferase Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 65
Aminoacid dehydrogenase-like, N-terminal domain NAD(P)-binding Rossmann-fold domains 62
Pentapeptide repeat-like Pentapeptide repeat-like 63
Riboflavin synthase domain-like 2Fe-2S ferredoxin-like 63
P-loop containing nucleoside triphosphate hydrolases Ribosomal protein S5 domain 2-like 65
Ferredoxin reductase-like, C-terminal NADP-linked domain 2Fe-2S ferredoxin-like 63
Phospholipase D/nuclease Phospholipase D/nuclease 53
P-loop containing nucleoside triphosphate hydrolases EF-G C-terminal domain-like 53
P-loop containing nucleoside triphosphate hydrolases CheY-like 54
Triger factor/SurA peptide-binding domain-like FKBP-like 54
2Fe-2S ferredoxin-like CO dehydrogenase ISP C-domain like 51
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheY-like 54
Translation proteins EF-G C-terminal domain-like 53
Class I glutamine amidotransferase-like Homeodomain-like 52
HAMP domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 53
Regulatory protein AraC Homeodomain-like 51
RmlC-like cupins Homeodomain-like 53
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Ribosomal protein S5 domain 2-like 44
Phage tail proteins Phage tail proteins 44
Mechanosensitive channel protein MscS (YggB), transmembrane region Mechanosensitive channel protein MscS (YggB), C-terminal domain 43
6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 43
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 42
Prokaryotic type I DNA topoisomerase Zinc beta-ribbon 41
Homodimeric domain of signal transducing histidine kinase CheY-like 43
(Trans)glycosidases Glycosyl hydrolase domain 44
Alpha-L RNA-binding motif Pseudouridine synthase 42
PurM N-terminal domain-like PurM C-terminal domain-like 42
TrpR-like Homeodomain-like 41
PYP-like sensor domain (PAS domain) P-loop containing nucleoside triphosphate hydrolases 43
Sm-like ribonucleoproteins Mechanosensitive channel protein MscS (YggB), C-terminal domain 43
lambda repressor-like DNA-binding domains RmlC-like cupins 41
Double Clp-N motif P-loop containing nucleoside triphosphate hydrolases 42
lambda repressor-like DNA-binding domains Periplasmic binding protein-like I 41
EF-G C-terminal domain-like EF-G C-terminal domain-like 42
lambda integrase-like, N-terminal domain DNA breaking-rejoining enzymes 41
Mechanosensitive channel protein MscS (YggB), transmembrane region Sm-like ribonucleoproteins 43
HAMP domain-like Homodimeric domain of signal transducing histidine kinase 42
Nucleic acid-binding proteins P-loop containing nucleoside triphosphate hydrolases 33
Nucleic acid-binding proteins Nucleic acid-binding proteins 33
Nucleic acid-binding proteins RuvA domain 2-like 33
PYP-like sensor domain (PAS domain) Methyl-accepting chemotaxis protein (MCP) signaling domain 31
HAD-like Calcium ATPase, transmembrane domain M 33
Nitrite/Sulfite reductase N-terminal domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 32
ClpP/crotonase 6-phosphogluconate dehydrogenase C-terminal domain-like 32
Aspartate receptor, ligand-binding domain Methyl-accepting chemotaxis protein (MCP) signaling domain 32
Thioesterase/thiol ester dehydrase-isomerase Thioesterase/thiol ester dehydrase-isomerase 31
cAMP-binding domain-like "Winged helix" DNA-binding domain 31
MurCD N-terminal domain MurD-like peptide ligases, catalytic domain 31
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex CoA-dependent acyltransferases 33
Single hybrid motif CoA-dependent acyltransferases 33
ClpP/crotonase ClpP/crotonase 31
Calcium ATPase, transduction domain A Calcium ATPase, transmembrane domain M 33
ValRS/IleRS/LeuRS editing domain Nucleotidylyl transferase 32
TPR-like TPR-like 33
NAD(P)-binding Rossmann-fold domains UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 31
Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like 32
CBS-domain pair FAD-binding/transporter-associated domain-like 31
Lysozyme-like beta-lactamase/transpeptidase-like 32
PYP-like sensor domain (PAS domain) PYP-like sensor domain (PAS domain) 33
PYP-like sensor domain (PAS domain) Homeodomain-like 32
6-phosphogluconate dehydrogenase C-terminal domain-like UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 31
Phage tail proteins gp5 N-terminal domain-like 33
Rudiment single hybrid motif Single hybrid motif 32
Molybdenum cofactor-binding domain Molybdenum cofactor-binding domain 31
PapD-like Periplasmic chaperone C-domain 31
PYP-like sensor domain (PAS domain) CheY-like 32
Glutathione synthetase ATP-binding domain-like Single hybrid motif 32
PreATP-grasp domain Single hybrid motif 32
Rhodanese/Cell cycle control phosphatase Rhodanese/Cell cycle control phosphatase 33
Methylated DNA-protein cysteine methyltransferase domain Methylated DNA-protein cysteine methyltransferase, C-terminal domain 32
ACT-like ACT-like 33
ValRS/IleRS/LeuRS editing domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 32
GAF domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 33
CheY-like Homeodomain-like 32
Calcium ATPase, transduction domain A HAD-like 33
Class II aaRS and biotin synthetases Class II aaRS ABD-related 33
HD-domain/PDEase-like ACT-like 32
Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 31
PYP-like sensor domain (PAS domain) GAF domain-like 33
Homeodomain-like SIS domain 31
Single hybrid motif Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 33
LeuD/IlvD-like Aconitase iron-sulfur domain 32
Translation proteins EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 31
ClpP/crotonase NAD(P)-binding Rossmann-fold domains 32
Nucleotidyltransferase ACT-like 32
P-loop containing nucleoside triphosphate hydrolases post-AAA+ oligomerization domain-like 32
P-loop containing nucleoside triphosphate hydrolases EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 31
E set domains (Trans)glycosidases 33
Nucleotidyltransferase HD-domain/PDEase-like 32
Cytochrome c oxidase subunit II-like, transmembrane region Cupredoxins 33
Nucleic acid-binding proteins Class II aaRS and biotin synthetases 33
EF-G C-terminal domain-like Ribosomal protein S5 domain 2-like 32
MurCD N-terminal domain MurD-like peptide ligases, peptide-binding domain 31
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 31
PUA domain-like P-loop containing nucleoside triphosphate hydrolases 22
PDZ domain-like PDZ domain-like 22
Actin-like ATPase domain Heat shock protein 70kD (HSP70), peptide-binding domain 21
Aminoacid dehydrogenase-like, N-terminal domain Isocitrate/Isopropylmalate dehydrogenase-like 21
Nqo1 FMN-binding domain-like Nqo1 middle domain-like 22
GreA transcript cleavage protein, N-terminal domain FKBP-like 21
NAD(P)-binding Rossmann-fold domains Tetrapyrrole methylase 21
HlyD-like secretion proteins HlyD-like secretion proteins 21
Nucleotidyltransferase Poly A polymerase C-terminal region-like 21
Ribosomal protein S5 domain 2-like Ribonuclease PH domain 2-like 22
Glutathione synthetase ATP-binding domain-like MurD-like peptide ligases, peptide-binding domain 21
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Type II DNA topoisomerase 22
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Adenine nucleotide alpha hydrolases-like 21
HMA, heavy metal-associated domain Calcium ATPase, transmembrane domain M 22
Siroheme synthase middle domains-like Tetrapyrrole methylase 21
Cyclophilin-like PH0987 N-terminal domain-like 22
Adenine nucleotide alpha hydrolases-like Adenine nucleotide alpha hydrolases-like 21
PUA domain-like Ribosomal protein S5 domain 2-like 22
Translation proteins ThrRS/AlaRS common domain 22
lambda repressor-like DNA-binding domains P-loop containing nucleoside triphosphate hydrolases 22
GAF domain-like P-loop containing nucleoside triphosphate hydrolases 22
Phosphohistidine domain Phosphoenolpyruvate/pyruvate domain 22
ParB/Sulfiredoxin KorB DNA-binding domain-like 21
Nqo1 middle domain-like Nqo1C-terminal domain-like 22
HMA, heavy metal-associated domain Calcium ATPase, transduction domain A 22
gp5 N-terminal domain-like Phage fibre proteins 22
Penicillin binding protein dimerisation domain beta-lactamase/transpeptidase-like 22
Nicotinate/Quinolinate PRTase N-terminal domain-like Nicotinate/Quinolinate PRTase C-terminal domain-like 21
Nitrite and sulphite reductase 4Fe-4S domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 21
E set domains Glycosyl hydrolase domain 22
P-loop containing nucleoside triphosphate hydrolases "Winged helix" DNA-binding domain 22
Translation proteins Ribosomal protein S5 domain 2-like 21
Nqo1 FMN-binding domain-like Nqo1C-terminal domain-like 22
4Fe-4S ferredoxins Formate dehydrogenase/DMSO reductase, domains 1-3 22
Thiamin diphosphate-binding fold (THDP-binding) Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 22
L30e-like alpha/beta knot 21
Cupredoxins Cupredoxins 22
Actin-like ATPase domain Heat shock protein 70kD (HSP70), C-terminal subdomain 21
GAF domain-like Homodimeric domain of signal transducing histidine kinase 22
Phage tail proteins Phage fibre proteins 22
FAD/NAD(P)-binding domain FAD/NAD(P)-binding domain 22
Phosphoglucomutase, first 3 domains Phosphoglucomutase, first 3 domains 21
alpha/beta-Hydrolases Galactose-binding domain-like 22
CO dehydrogenase molybdoprotein N-domain-like Molybdenum cofactor-binding domain 22
MoeA N-terminal region -like MoeA C-terminal domain-like 21
FAD-linked oxidases, C-terminal domain alpha-helical ferredoxin 22
Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 22
Ribosomal protein S5 domain 2-like Type II DNA topoisomerase 22
N-terminal domain of alpha and beta subunits of F1 ATP synthase P-loop containing nucleoside triphosphate hydrolases 21
Trypsin-like serine proteases PDZ domain-like 22
Cytochrome c C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase 21
Phosphoglucomutase, first 3 domains Phosphoglucomutase, C-terminal domain 21
NAD(P)-binding Rossmann-fold domains ACT-like 22
HD-domain/PDEase-like TGS-like 21
Molybdenum cofactor biosynthesis proteins MoeA C-terminal domain-like 21
MetI-like MetI-like 21
Adenine nucleotide alpha hydrolases-like DHS-like NAD/FAD-binding domain 21
Chaperone J-domain HSP40/DnaJ peptide-binding domain 22
Flavoproteins Ferredoxin reductase-like, C-terminal NADP-linked domain 22
Class II aaRS and biotin synthetases ThrRS/AlaRS common domain 22
2Fe-2S ferredoxin-like alpha-helical ferredoxin 21
beta-lactamase/transpeptidase-like Penicillin-binding protein associated domain 21
Nucleotidyltransferase Nucleotidyltransferase substrate binding subunit/domain 22
2Fe-2S ferredoxin-like 4Fe-4S ferredoxins 22
FabD/lysophospholipase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 22
NAD(P)-binding Rossmann-fold domains Isocitrate/Isopropylmalate dehydrogenase-like 21
DNA ligase/mRNA capping enzyme, catalytic domain Nucleic acid-binding proteins 22
Cupredoxins Cytochrome c 22
NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains 22
Nucleic acid-binding proteins Translation proteins SH3-like domain 22
Glutathione synthetase ATP-binding domain-like MurD-like peptide ligases, catalytic domain 21
2Fe-2S ferredoxin-like Formate dehydrogenase/DMSO reductase, domains 1-3 22
N-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase 21
P-loop containing nucleoside triphosphate hydrolases ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 22
Homeodomain-like Probable bacterial effector-binding domain 22
P-loop containing nucleoside triphosphate hydrolases Hypothetical protein YjiA, C-terminal domain 21
HMA, heavy metal-associated domain HAD-like 22
Heat shock protein 70kD (HSP70), peptide-binding domain Heat shock protein 70kD (HSP70), C-terminal subdomain 21
Type II DNA topoisomerase GyrA/ParC C-terminal domain-like 21
Homeodomain-like Ribonuclease H-like 22
P-loop containing nucleoside triphosphate hydrolases Restriction endonuclease-like 22
Nucleotide cyclase EAL domain-like 22
Creatinase/prolidase N-terminal domain Creatinase/aminopeptidase 22
Nucleotidyltransferase TGS-like 21
Pectin lyase-like Autotransporter 22
HSP40/DnaJ peptide-binding domain HSP40/DnaJ peptide-binding domain 22
Fe,Mn superoxide dismutase (SOD), N-terminal domain Fe,Mn superoxide dismutase (SOD), C-terminal domain 22
NAD(P)-binding Rossmann-fold domains Siroheme synthase middle domains-like 21
FAD/NAD(P)-binding domain HI0933 insert domain-like 21
MoeA N-terminal region -like Molybdenum cofactor biosynthesis proteins 21
Flavoproteins Riboflavin synthase domain-like 22
TGS-like ACT-like 21
P-loop containing nucleoside triphosphate hydrolases C-terminal domain of alpha and beta subunits of F1 ATP synthase 21
Fe-S cluster assembly (FSCA) domain-like P-loop containing nucleoside triphosphate hydrolases 21
Nitrite/Sulfite reductase N-terminal domain-like Nitrite/Sulfite reductase N-terminal domain-like 21
tRNA-binding arm Class II aaRS and biotin synthetases 21
FAD-binding/transporter-associated domain-like alpha-helical ferredoxin 22
PLP-binding barrel Alanine racemase C-terminal domain-like 22
Translation initiation factor IF3, N-terminal domain Translation initiation factor IF3, C-terminal domain 11
Glutathione synthetase ATP-binding domain-like Phosphohistidine domain 11
LysM domain LysM domain 11
Prokaryotic type KH domain (KH-domain type II) Ribosomal protein S3 C-terminal domain 11
Dihydropteroate synthetase-like Methionine synthase domain 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) PRTase-like 11
Formyltransferase FMT C-terminal domain-like 11
Histidine-containing phosphotransfer domain, HPT domain Homodimeric domain of signal transducing histidine kinase 11
Glutathione synthetase ATP-binding domain-like Cyclophilin-like 11
N-acetylmuramoyl-L-alanine amidase-like PGBD-like 11
"Winged helix" DNA-binding domain LexA/Signal peptidase 11
Acyl-CoA dehydrogenase C-terminal domain-like Acyl-CoA dehydrogenase C-terminal domain-like 11
Cyclophilin-like Single hybrid motif 11
Methionine synthase domain Methionine synthase activation domain-like 11
Single hybrid motif FAD/NAD-linked reductases, dimerisation (C-terminal) domain 11
Carbamate kinase-like Acyl-CoA N-acyltransferases (Nat) 11
Riboflavin synthase domain-like Riboflavin synthase domain-like 11
UBA-like Elongation factor Ts (EF-Ts), dimerisation domain 11
Phage fibre proteins Phage fibre proteins 11
(Trans)glycosidases (Trans)glycosidases 11
Homocysteine S-methyltransferase Cobalamin (vitamin B12)-binding domain 11
Nucleic acid-binding proteins PheT/TilS domain 11
Cytidine deaminase-like Dihydrofolate reductase-like 11
N-terminal domain of MutM-like DNA repair proteins S13-like H2TH domain 11
FAD-linked oxidases, C-terminal domain FAD-linked oxidases, C-terminal domain 11
Insert subdomain of RNA polymerase alpha subunit RBP11-like subunits of RNA polymerase 11
FMN-binding split barrel 2Fe-2S ferredoxin-like 11
4Fe-4S ferredoxins ADC-like 11
Protein kinase-like (PK-like) ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Ribbon-helix-helix FAD-linked oxidoreductase 11
P-loop containing nucleoside triphosphate hydrolases C-terminal domain of B transposition protein 11
MurE/MurF N-terminal domain MurD-like peptide ligases, peptide-binding domain 11
Class II aaRS and biotin synthetases YbaK/ProRS associated domain 11
SMAD/FHA domain P-loop containing nucleoside triphosphate hydrolases 11
P-loop containing nucleoside triphosphate hydrolases Initiation factor IF2/eIF5b, domain 3 11
Nucleic acid-binding proteins ArfGap/RecO-like zinc finger 11
Putative DNA-binding domain P-loop containing nucleoside triphosphate hydrolases 11
Carbamoyl phosphate synthetase, small subunit N-terminal domain Class I glutamine amidotransferase-like 11
Creatinase/prolidase N-terminal domain Creatinase/prolidase N-terminal domain 11
Rhodanese/Cell cycle control phosphatase P-loop containing nucleoside triphosphate hydrolases 11
N-utilization substance G protein NusG, N-terminal domain Translation proteins SH3-like domain 11
post-HMGL domain-like 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 11
DNA topoisomerase I domain DNA breaking-rejoining enzymes 11
Nucleotidylyl transferase Nucleic acid-binding proteins 11
Hsp33 domain HSP33 redox switch-like 11
N-terminal domain of DnaB helicase P-loop containing nucleoside triphosphate hydrolases 11
Ribonuclease H-like DNA/RNA polymerases 11
PGBD-like PGBD-like 11
PPK N-terminal domain-like PHP14-like 11
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphohistidine domain 11
Nucleotidylyl transferase Riboflavin kinase-like 11
Adenine nucleotide alpha hydrolases-like GMP synthetase C-terminal dimerisation domain 11
HMA, heavy metal-associated domain Cation efflux protein transmembrane domain-like 11
CarD-like TRCF domain-like 11
Translation proteins Translation proteins 11
Putative DNA-binding domain Anticodon-binding domain of PheRS 11
"Winged helix" DNA-binding domain NagB/RpiA/CoA transferase-like 11
FMN-binding split barrel Riboflavin synthase domain-like 11
Nucleotidylyl transferase An anticodon-binding domain of class I aminoacyl-tRNA synthetases 11
CheY-binding domain of CheA Homodimeric domain of signal transducing histidine kinase 11
FMN-binding split barrel Ferredoxin reductase-like, C-terminal NADP-linked domain 11
PIN domain-like P-loop containing nucleoside triphosphate hydrolases 11
P-loop containing nucleoside triphosphate hydrolases RecA protein, C-terminal domain 11
ABC transporter transmembrane region ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Aspartate/glutamate racemase Aspartate/glutamate racemase 11
FliG FliG 11
Barwin-like endoglucanases Sporulation related repeat 11
TolB, N-terminal domain Tricorn protease N-terminal domain 11
GAF domain-like CheY-like 11
Acyl-CoA dehydrogenase NM domain-like Acyl-CoA dehydrogenase NM domain-like 11
CBS-domain pair MgtE membrane domain-like 11
Nitrous oxide reductase, N-terminal domain Cupredoxins 11
Transcription factor NusA, N-terminal domain Rad51 N-terminal domain-like 11
PEP carboxykinase N-terminal domain PEP carboxykinase-like 11
P-loop containing nucleoside triphosphate hydrolases TGS-like 11
Rudiment single hybrid motif PH0987 N-terminal domain-like 11
YbaK/ProRS associated domain Class II aaRS ABD-related 11
Bacterial muramidases Lysozyme-like 11
Glutathione synthetase ATP-binding domain-like Methylglyoxal synthase-like 11
P-loop containing nucleoside triphosphate hydrolases FtsH protease domain-like 11
Nucleotide cyclase HCP-like 11
P-loop containing nucleoside triphosphate hydrolases HCP-like 11
Ribonuclease H-like RuvA domain 2-like 11
Aldolase AFP III-like domain 11
Elongation factor Ts (EF-Ts), dimerisation domain Elongation factor Ts (EF-Ts), dimerisation domain 11
GroEL equatorial domain-like GroEL apical domain-like 11
Methionine synthase domain Cobalamin (vitamin B12)-binding domain 11
P-loop containing nucleoside triphosphate hydrolases Smc hinge domain 11
Tex N-terminal region-like Nucleic acid-binding proteins 11
alpha-helical ferredoxin Nucleotide-binding domain 11
Nudix "Winged helix" DNA-binding domain 11
Cobalamin (vitamin B12)-binding domain Methionine synthase activation domain-like 11
Transcription factor NusA, N-terminal domain Nucleic acid-binding proteins 11
ABC transporter transmembrane region ABC transporter transmembrane region 11
GroEL-intermediate domain like GroEL apical domain-like 11
FabD/lysophospholipase-like NAD(P)-binding Rossmann-fold domains 11
Carbamoyl phosphate synthetase, large subunit connection domain Methylglyoxal synthase-like 11
P-loop containing nucleoside triphosphate hydrolases Prokaryotic type KH domain (KH-domain type II) 11
FGAM synthase PurL, linker domain Class I glutamine amidotransferase-like 11
HAMP domain-like PYP-like sensor domain (PAS domain) 11
Histidine-containing phosphotransfer domain, HPT domain ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
PIN domain-like Ribonuclease H-like 11
PreATP-grasp domain PreATP-grasp domain 11
PurM C-terminal domain-like Class I glutamine amidotransferase-like 11
Homodimeric domain of signal transducing histidine kinase CheW-like 11
FGAM synthase PurL, linker domain PurM C-terminal domain-like 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) ThrRS/AlaRS common domain 11
"Winged helix" DNA-binding domain "Winged helix" DNA-binding domain 11
PrpR receptor domain-like PYP-like sensor domain (PAS domain) 11
Thiolase-like FabD/lysophospholipase-like 11
Putative DNA-binding domain mu transposase, C-terminal domain 11
C-terminal effector domain of the bipartite response regulators HCP-like 11
PDZ domain-like ClpP/crotonase 11
CheY-binding domain of CheA ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
DNA-glycosylase Nudix 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheW-like 11
Glutathione synthetase ATP-binding domain-like VPA0735-like 11
DNA/RNA polymerases Lesion bypass DNA polymerase (Y-family), little finger domain 11
Metalloproteases ("zincins"), catalytic domain PDZ domain-like 11
N-terminal domain of bifunctional PutA protein ALDH-like 11
DinB/YfiT-like putative metalloenzymes C-type lectin-like 11
P-loop containing nucleoside triphosphate hydrolases TRCF domain-like 11
TPR-like Nucleotide cyclase 11
Ada DNA repair protein, N-terminal domain (N-Ada 10) Methylated DNA-protein cysteine methyltransferase domain 11
FAD-linked oxidoreductase ALDH-like 11
PrpR receptor domain-like P-loop containing nucleoside triphosphate hydrolases 11
Thioredoxin-like Nqo1C-terminal domain-like 11
Diaminopimelate epimerase-like Diaminopimelate epimerase-like 11
Protein kinase-like (PK-like) P-loop containing nucleoside triphosphate hydrolases 11
Dihydropteroate synthetase-like Cobalamin (vitamin B12)-binding domain 11
Acetyl-CoA synthetase-like Thioesterase/thiol ester dehydrase-isomerase 11
Trigger factor ribosome-binding domain Triger factor/SurA peptide-binding domain-like 11
Homocysteine S-methyltransferase Methionine synthase activation domain-like 11
Homeodomain-like Methylated DNA-protein cysteine methyltransferase domain 11
Nucleotidyltransferase substrate binding subunit/domain ACT-like 11
Class II aaRS and biotin synthetases Translation proteins 11
(Trans)glycosidases Protein kinase-like (PK-like) 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase DNA mismatch repair protein MutL 11
FabD/lysophospholipase-like ACP-like 11
DNA ligase/mRNA capping enzyme, catalytic domain RuvA domain 2-like 11
Ribosomal protein L6 Ribosomal protein L6 11
FAH "Winged helix" DNA-binding domain 11
Insert subdomain of RNA polymerase alpha subunit C-terminal domain of RNA polymerase alpha subunit 11
PrpR receptor domain-like Homeodomain-like 11
PIN domain-like DNA/RNA polymerases 11
Nucleotidylyl transferase Ribosomal protein L25-like 11
FAD-binding/transporter-associated domain-like Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain 11
C-terminal effector domain of the bipartite response regulators TPR-like 11
Succinyl-CoA synthetase domains Acyl-CoA N-acyltransferases (Nat) 11
4Fe-4S ferredoxins Riboflavin synthase domain-like 11
YrdC/RibB RibA-like 11
Acyl-CoA dehydrogenase C-terminal domain-like Tetracyclin repressor-like, C-terminal domain 11
Aldolase post-HMGL domain-like 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Nucleotidylyl transferase 11
RBP11-like subunits of RNA polymerase C-terminal domain of RNA polymerase alpha subunit 11
PUA domain-like alpha/beta knot 11
PLP-dependent transferases Ornithine decarboxylase C-terminal domain 11
NAD(P)-binding Rossmann-fold domains VPA0735-like 11
Cytochrome c oxidase subunit II-like, transmembrane region Cytochrome c 11
Ada DNA repair protein, N-terminal domain (N-Ada 10) Methylated DNA-protein cysteine methyltransferase, C-terminal domain 11
Adenine nucleotide alpha hydrolases-like MesJ substrate recognition domain-like 11
Probable ACP-binding domain of malonyl-CoA ACP transacylase ACP-like 11
lambda repressor-like DNA-binding domains C-terminal domain of B transposition protein 11
Chemotaxis receptor methyltransferase CheR, N-terminal domain S-adenosyl-L-methionine-dependent methyltransferases 11
ClpP/crotonase NfeD domain-like 11
Class II aaRS and biotin synthetases Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) 11
PH0987 N-terminal domain-like Single hybrid motif 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
MOP-like MOP-like 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain III 11
FAD-linked reductases, C-terminal domain 4Fe-4S ferredoxins 11
Lysozyme-like PGBD-like 11
Translation proteins PRC-barrel domain 11
Peptidase/esterase 'gauge' domain alpha/beta-Hydrolases 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain ACT-like 11
Glutamyl tRNA-reductase catalytic, N-terminal domain NAD(P)-binding Rossmann-fold domains 11
GIY-YIG endonuclease RuvA domain 2-like 11
dsRNA-binding domain-like Ribosomal protein S5 domain 2-like 11
Eukaryotic type KH-domain (KH-domain type I) Nucleic acid-binding proteins 11
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 Nucleic acid-binding proteins 11
GAF domain-like Homeodomain-like 11
Tex N-terminal region-like RuvA domain 2-like 11
Thiol:disulfide interchange protein DsbD, N-terminal domain (DsbD-alpha) Thioredoxin-like 11
C-terminal effector domain of the bipartite response regulators Nucleotide cyclase 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
ValRS/IleRS/LeuRS editing domain tRNA-binding arm 11
ABC transporter involved in vitamin B12 uptake, BtuC ABC transporter involved in vitamin B12 uptake, BtuC 11
Chorismate mutase II ACT-like 11
Glutamyl tRNA-reductase catalytic, N-terminal domain Glutamyl tRNA-reductase dimerization domain 11
Nucleotide-diphospho-sugar transferases Trimeric LpxA-like enzymes 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases tRNA-binding arm 11
N-terminal domain of MutM-like DNA repair proteins Glucocorticoid receptor-like (DNA-binding domain) 11
Globin-like Ferredoxin reductase-like, C-terminal NADP-linked domain 11
Zinc beta-ribbon DNA primase core 11
Homocysteine S-methyltransferase Dihydropteroate synthetase-like 11
PreATP-grasp domain Carbamoyl phosphate synthetase, large subunit connection domain 11
DsbC/DsbG N-terminal domain-like Thioredoxin-like 11
Acyl-CoA dehydrogenase NM domain-like Homeodomain-like 11
Carbon-nitrogen hydrolase Adenine nucleotide alpha hydrolases-like 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Alpha subunit of glutamate synthase, C-terminal domain 11
RNase III domain-like dsRNA-binding domain-like 11
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 11
PK beta-barrel domain-like PK C-terminal domain-like 11
EspE N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 11
Class I glutamine amidotransferase-like LD-carboxypeptidase A C-terminal domain-like 11
FAD/NAD(P)-binding domain NAD(P)-binding Rossmann-fold domains 11
MurD-like peptide ligases, catalytic domain MurD-like peptide ligases, catalytic domain 11
Protein kinase-like (PK-like) Homodimeric domain of signal transducing histidine kinase 11
Ribosomal L11/L12e N-terminal domain Ribosomal protein L11, C-terminal domain 11
FabD/lysophospholipase-like GroES-like 11
lambda repressor-like DNA-binding domains Cyanase C-terminal domain 11
Thiolase-like ACP-like 11
PreATP-grasp domain Methylglyoxal synthase-like 11
Ada DNA repair protein, N-terminal domain (N-Ada 10) Homeodomain-like 11
LuxS/MPP-like metallohydrolase LuxS/MPP-like metallohydrolase 11
CheC-like Surface presentation of antigens (SPOA) 11
GroES-like GroES-like 11
Ribonuclease PH domain 2-like Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 11
Ribonuclease H-like mu transposase, C-terminal domain 11
PLP-dependent transferases PLP-dependent transferases 11
NAD(P)-binding Rossmann-fold domains LDH C-terminal domain-like 11
MgtE N-terminal domain-like MgtE membrane domain-like 11
Ribonuclease PH domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Nucleic acid-binding proteins 11
P-loop containing nucleoside triphosphate hydrolases Class I glutamine amidotransferase-like 11
Actin-like ATPase domain HD-domain/PDEase-like 11
Single hybrid motif Single hybrid motif 11
PurM C-terminal domain-like PurM C-terminal domain-like 11
S-adenosyl-L-methionine-dependent methyltransferases NAD(P)-binding Rossmann-fold domains 11
MOSC N-terminal domain-like PK beta-barrel domain-like 11
HAMP domain-like GAF domain-like 11
CorA soluble domain-like Magnesium transport protein CorA, transmembrane region 11
CoA-transferase family III (CaiB/BaiF) CoA-transferase family III (CaiB/BaiF) 11
Methylglyoxal synthase-like Cytidine deaminase-like 11
PYP-like sensor domain (PAS domain) EAL domain-like 11
Class II aaRS and biotin synthetases GAD domain-like 11
Pectin lyase-like Colicin D/E5 nuclease domain 11
DNA ligase/mRNA capping enzyme, catalytic domain BRCT domain 11
Ribosomal protein S5 domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
RuvA domain 2-like DNA helicase RuvA subunit, C-terminal domain 11
NAD(P)-binding Rossmann-fold domains 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
Glutathione synthetase ATP-binding domain-like Phosphoenolpyruvate/pyruvate domain 11
Obg GTP-binding protein N-terminal domain P-loop containing nucleoside triphosphate hydrolases 11
NAD(P)-binding Rossmann-fold domains ACP-like 11
5' to 3' exonuclease, C-terminal subdomain DNA/RNA polymerases 11
Ribbon-helix-helix ALDH-like 11
FAD/NAD(P)-binding domain Nitrite and sulphite reductase 4Fe-4S domain-like 11
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphoenolpyruvate/pyruvate domain 11
Glutamine synthetase/guanido kinase GatB/YqeY motif 11
Chaperone J-domain DnaJ/Hsp40 cysteine-rich domain 11
Epsilon subunit of F1F0-ATP synthase N-terminal domain Epsilon subunit of F1F0-ATP synthase C-terminal domain 11
CheY-binding domain of CheA CheW-like 11
Formate/glycerate dehydrogenase catalytic domain-like ACT-like 11
YajQ-like YajQ-like 11
Ribonuclease PH domain 2-like Nucleic acid-binding proteins 11
Actin-like ATPase domain Acyl-CoA N-acyltransferases (Nat) 11
CBS-domain pair Inosine monophosphate dehydrogenase (IMPDH) 11
Aconitase B, N-terminal domain LeuD/IlvD-like 11
PheT/TilS domain Putative DNA-binding domain 11
PHP14-like Phospholipase D/nuclease 11
Protein kinase-like (PK-like) GAF domain-like 11
Glucocorticoid receptor-like (DNA-binding domain) P-loop containing nucleoside triphosphate hydrolases 11
Clc chloride channel CBS-domain pair 11
MurE/MurF N-terminal domain MurD-like peptide ligases, catalytic domain 11
TGS-like ThrRS/AlaRS common domain 11
NAD(P)-binding Rossmann-fold domains TrkA C-terminal domain-like 11
Nucleic acid-binding proteins GAD domain-like 11
NAD(P)-binding Rossmann-fold domains Glutamyl tRNA-reductase dimerization domain 11
Ribosomal protein S5 domain 2-like HSP90 C-terminal domain 11
Ribosomal protein S5 domain 2-like Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 11
Putative DNA-binding domain Translation proteins 11
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 Eukaryotic type KH-domain (KH-domain type I) 11
PYP-like sensor domain (PAS domain) C-terminal effector domain of the bipartite response regulators 11
NAD-binding domain of HMG-CoA reductase Substrate-binding domain of HMG-CoA reductase 11
Oxidoreductase molybdopterin-binding domain E set domains 11
ThrRS/AlaRS common domain Class II aaRS ABD-related 11
Nucleotidylyl transferase YegP-like 11
L9 N-domain-like Ribosomal protein L9 C-domain 11
Globin-like Riboflavin synthase domain-like 11
Domain of the SRP/SRP receptor G-proteins P-loop containing nucleoside triphosphate hydrolases 11
MgtE N-terminal domain-like CBS-domain pair 11
Dihydropteroate synthetase-like Methionine synthase activation domain-like 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase HSP90 C-terminal domain 11
Putative DNA-binding domain Initiation factor IF2/eIF5b, domain 3 11
Periplasmic binding protein-like II Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain 11
NusB-like S-adenosyl-L-methionine-dependent methyltransferases 11
YhbC-like, N-terminal domain YhbC-like, C-terminal domain 11
"Winged helix" DNA-binding domain MOP-like 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
NagB/RpiA/CoA transferase-like D-ribose-5-phosphate isomerase (RpiA), lid domain 11
Trigger factor ribosome-binding domain FKBP-like 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain II 11
HprK N-terminal domain-like PEP carboxykinase-like 11
PheT/TilS domain Anticodon-binding domain of PheRS 11
Coiled-coil domain of nucleotide exchange factor GrpE Head domain of nucleotide exchange factor GrpE 11
Leukotriene A4 hydrolase N-terminal domain Metalloproteases ("zincins"), catalytic domain 11
Zinc beta-ribbon DNA primase DnaG, C-terminal domain 11
Carbamate kinase-like PUA domain-like 11
FKBP-like FKBP-like 11
a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 11
Protein kinase-like (PK-like) PYP-like sensor domain (PAS domain) 11
Ribbon-helix-helix N-terminal domain of bifunctional PutA protein 11
RuvA domain 2-like RuvA domain 2-like 11
P-loop containing nucleoside triphosphate hydrolases FdhE-like 11
Thiolase-like NAD(P)-binding Rossmann-fold domains 11
PPK N-terminal domain-like Phospholipase D/nuclease 11
PreATP-grasp domain PH0987 N-terminal domain-like 11
TPR-like HCP-like 11
GroES-like ACP-like 11
Lysozyme-like LysM domain 11
GroEL equatorial domain-like GroEL-intermediate domain like 11
Class I glutamine amidotransferase-like Adenine nucleotide alpha hydrolases-like 11
FAD-binding/transporter-associated domain-like CO dehydrogenase flavoprotein C-terminal domain-like 11
Pili subunits Pili subunits 11
Glutathione synthetase ATP-binding domain-like Carbamoyl phosphate synthetase, large subunit connection domain 11
TK C-terminal domain-like Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 11
GAF domain-like Nucleotide cyclase 11
DNA repair protein MutS, domain II P-loop containing nucleoside triphosphate hydrolases 11
P-loop containing nucleoside triphosphate hydrolases CBS-domain pair 11
Thiolase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 11
Chaperone J-domain HSC20 (HSCB), C-terminal oligomerisation domain 11
Nucleotidylyl transferase tRNA-binding arm 11
P-loop containing nucleoside triphosphate hydrolases Pre-protein crosslinking domain of SecA 11
PreATP-grasp domain Cyclophilin-like 11
Thioredoxin-like Nqo1 FMN-binding domain-like 11
Putative DNA-binding domain Ribonuclease H-like 11
PYP-like sensor domain (PAS domain) Nucleotide cyclase 11
Methylglyoxal synthase-like Methylglyoxal synthase-like 11
Nucleotidyltransferase substrate binding subunit/domain Nucleotidyltransferase substrate binding subunit/domain 11
Transcription factor NusA, N-terminal domain Prokaryotic type KH domain (KH-domain type II) 11
TrkA C-terminal domain-like TrkA C-terminal domain-like 11
Ribosomal protein L7/12, oligomerisation (N-terminal) domain ClpS-like 11
Class II aaRS and biotin synthetases Anticodon-binding domain of PheRS 11
Probable ACP-binding domain of malonyl-CoA ACP transacylase GroES-like 11
Cyclophilin-like Cyclophilin-like 11
Homo-oligomeric flavin-containing Cys decarboxylases, HFCD CoaB-like 11
P-loop containing nucleoside triphosphate hydrolases Signal peptide-binding domain 11
Nucleic acid-binding proteins DNA helicase RuvA subunit, C-terminal domain 11
Probable ACP-binding domain of malonyl-CoA ACP transacylase NAD(P)-binding Rossmann-fold domains 11
GIY-YIG endonuclease C-terminal UvrC-binding domain of UvrB 11
C-terminal UvrC-binding domain of UvrB RuvA domain 2-like 11
DnaK suppressor protein DksA, alpha-hairpin domain Glucocorticoid receptor-like (DNA-binding domain) 11
N-terminal domain of bifunctional PutA protein FAD-linked oxidoreductase 11
FMN-linked oxidoreductases Alpha subunit of glutamate synthase, C-terminal domain 11
Nucleic acid-binding proteins S-adenosyl-L-methionine-dependent methyltransferases 11
Ribosomal protein S5 domain 2-like DNA mismatch repair protein MutL 11
PurS-like PurM N-terminal domain-like 11
Cytochrome c oxidase subunit I-like Cytochrome c oxidase subunit III-like 11
DNA clamp DNA clamp 11
Glycosyl hydrolase domain Protein kinase-like (PK-like) 11
Aconitase B, N-terminal domain Aconitase iron-sulfur domain 11
Folate-binding domain Aminomethyltransferase beta-barrel domain 11
P-loop containing nucleoside triphosphate hydrolases Homodimeric domain of signal transducing histidine kinase 11
Class II aaRS and biotin synthetases C-terminal domain of transcriptional repressors 11
P-loop containing nucleoside triphosphate hydrolases C-terminal UvrC-binding domain of UvrB 11
Thioredoxin-like Nqo1 middle domain-like 11
Nudix Thiamin phosphate synthase 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) Translation proteins 11
Aldolase 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 11
Resolvase-like Homeodomain-like 11
TPR-like UDP-Glycosyltransferase/glycogen phosphorylase 11
E set domains E set domains 11
Nucleic acid-binding proteins Putative DNA-binding domain 11
YegP-like YegP-like 11
Tubulin nucleotide-binding domain-like Tubulin C-terminal domain-like 11
PurM N-terminal domain-like Class I glutamine amidotransferase-like 11
HMA, heavy metal-associated domain HMA, heavy metal-associated domain 11
FAD/NAD(P)-binding domain 4Fe-4S ferredoxins 11
TPR-like P-loop containing nucleoside triphosphate hydrolases 11
Nucleotide cyclase P-loop containing nucleoside triphosphate hydrolases 11
Rho N-terminal domain-like Nucleic acid-binding proteins 11
Translation proteins Initiation factor IF2/eIF5b, domain 3 11
Homocysteine S-methyltransferase Methionine synthase domain 11
TGS-like Class II aaRS and biotin synthetases 11
Rudiment single hybrid motif Cyclophilin-like 11
Thiolase-like GroES-like 11
RuvA domain 2-like BRCT domain 11
P-loop containing nucleoside triphosphate hydrolases Helical scaffold and wing domains of SecA 11
Glutathione synthetase ATP-binding domain-like PH0987 N-terminal domain-like 11
PurS-like PurM C-terminal domain-like 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) FMN-linked oxidoreductases 11
FGAM synthase PurL, linker domain PurM N-terminal domain-like 11
Histidine-containing phosphotransfer domain, HPT domain CheY-binding domain of CheA 11
Rad51 N-terminal domain-like Rad51 N-terminal domain-like 11
Chorismate mutase II Periplasmic binding protein-like II 11
Thiolase-like Heme oxygenase-like 11
Homeodomain-like mu transposase, C-terminal domain 11
4Fe-4S ferredoxins Respiratory nitrate reductase 1 gamma chain 11
FAD/NAD(P)-binding domain FMN-linked oxidoreductases 11
5' to 3' exonuclease, C-terminal subdomain Ribonuclease H-like 11
FMN-binding split barrel UbiD C-terminal domain-like 11
Nucleic acid-binding proteins BRCT domain 11
NTF2-like NTF2-like 11
Phosphoenolpyruvate/pyruvate domain PK C-terminal domain-like 11
Acyl-CoA dehydrogenase NM domain-like Tetracyclin repressor-like, C-terminal domain 11
MurE/MurF N-terminal domain MurE/MurF N-terminal domain 11
Tex N-terminal region-like Ribonuclease H-like 11
PP2C-like Protein kinase-like (PK-like) 11
DNA primase core DNA primase DnaG, C-terminal domain 11
Homeodomain-like Methylated DNA-protein cysteine methyltransferase, C-terminal domain 11
Trimeric LpxA-like enzymes Autotransporter 11
Ribonuclease H-like Nucleic acid-binding proteins 11
DNA repair protein MutS, domain I P-loop containing nucleoside triphosphate hydrolases 11
Putative DNA-binding domain Class II aaRS and biotin synthetases 11
Ribosomal protein S5 domain 2-like GHMP Kinase, C-terminal domain 11
RuvA domain 2-like JAB1/MPN domain 11
DNA repair protein MutS, domain II DNA repair protein MutS, domain III 11
Putative DNA-binding domain Homeodomain-like 11
S-adenosylmethionine synthetase S-adenosylmethionine synthetase 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) SIS domain 11
Macro domain-like Zn-dependent exopeptidases 11
Periplasmic binding protein-like II ACT-like 11
Rho N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 11
PIN domain-like 5' to 3' exonuclease, C-terminal subdomain 11
Galactose mutarotase-like Glycosyl hydrolase domain 11
FAD/NAD(P)-binding domain Nitrite/Sulfite reductase N-terminal domain-like 11
PurS-like Class I glutamine amidotransferase-like 11
ACT-like Formyltransferase 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases Nucleic acid-binding proteins 11
Galactose mutarotase-like (Trans)glycosidases 11
TGS-like Class II aaRS ABD-related 11
Prokaryotic type KH domain (KH-domain type II) Rad51 N-terminal domain-like 11
ABC transporter transmembrane region CheY-like 11
TrmE connector domain P-loop containing nucleoside triphosphate hydrolases 11
Glutathione synthetase ATP-binding domain-like Glutathione synthetase ATP-binding domain-like 11
Carbamate kinase-like ACT-like 11
Ribonuclease PH domain 2-like Ribonuclease PH domain 2-like 11
CheY-like Methylesterase CheB, C-terminal domain 11
PheT/TilS domain Class II aaRS and biotin synthetases 11
Class I glutamine amidotransferase-like GMP synthetase C-terminal dimerisation domain 11
DNA methylase specificity domain DNA methylase specificity domain 11
Pili subunits RuvA domain 2-like 11
4Fe-4S ferredoxins Ferredoxin reductase-like, C-terminal NADP-linked domain 11
C-terminal effector domain of the bipartite response regulators P-loop containing nucleoside triphosphate hydrolases 11
P-loop containing nucleoside triphosphate hydrolases ACT-like 11
Fumarylacetoacetate hydrolase, FAH, N-terminal domain FAH 11
S13-like H2TH domain Glucocorticoid receptor-like (DNA-binding domain) 11
UROD/MetE-like UROD/MetE-like 11
Nucleotidyltransferase Nucleotidyltransferase 11
Nucleic acid-binding proteins Prokaryotic type KH domain (KH-domain type II) 11
PK beta-barrel domain-like Phosphoenolpyruvate/pyruvate domain 11
GAF domain-like EAL domain-like 11
Nucleic acid-binding proteins Rad51 N-terminal domain-like 11
Succinyl-CoA synthetase domains VPA0735-like 11
DNA repair protein MutS, domain III P-loop containing nucleoside triphosphate hydrolases 11
Nucleic acid-binding proteins Anticodon-binding domain of PheRS 11
Origin of replication-binding domain, RBD-like P-loop containing nucleoside triphosphate hydrolases 11
Pre-protein crosslinking domain of SecA Helical scaffold and wing domains of SecA 11
Acyl-CoA dehydrogenase C-terminal domain-like Homeodomain-like 11
DnaJ/Hsp40 cysteine-rich domain HSP40/DnaJ peptide-binding domain 11
Adenine nucleotide alpha hydrolases-like Argininosuccinate synthetase, C-terminal domain 11
Nucleotidylyl transferase Alpha-L RNA-binding motif 11
Nucleotidyltransferase substrate binding subunit/domain HD-domain/PDEase-like 11
Glutamine synthetase, N-terminal domain Glutamine synthetase/guanido kinase 11
R1 subunit of ribonucleotide reductase, N-terminal domain PFL-like glycyl radical enzymes 11
Histidine-containing phosphotransfer domain, HPT domain CheW-like 11
MurD-like peptide ligases, peptide-binding domain MurD-like peptide ligases, peptide-binding domain 11
P-loop containing nucleoside triphosphate hydrolases TrpR-like 11
PurM N-terminal domain-like PurM N-terminal domain-like 11
2Fe-2S ferredoxin-like ADC-like 11
Single hybrid motif FAD/NAD(P)-binding domain 11
Prokaryotic type KH domain (KH-domain type II) Prokaryotic type KH domain (KH-domain type II) 11
Transmembrane di-heme cytochromes a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 11
S-adenosyl-L-methionine-dependent methyltransferases Putative methyltransferase TM0872, insert domain 11
Nucleotide-binding domain Nucleotide-binding domain 11
GAF domain-like GAF domain-like 11
Ribosomal protein S5 domain 2-like Nucleic acid-binding proteins 11
P-loop containing nucleoside triphosphate hydrolases HRDC-like 11
Tryptophan synthase beta subunit-like PLP-dependent enzymes ACT-like 11
P-loop containing nucleoside triphosphate hydrolases CarD-like 11
LmbE-like Fucose-specific lectin 11
PurS-like FGAM synthase PurL, linker domain 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Nucleotidylyl transferase 11

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