SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.


Domain combination pairs in Coccomyxa subellipsoidea sp. C-169 v2

All pairs of domain combinations at the superfamily level are listed here.
The identification of domain pairs does not account for the possibility of non-contiguous domains. Inserted, or interlaced, domains are seen as having a simple pair ordering.

  • For a list of unique full length architectures for this genome click here (can be slow).
Adjacent domain pairs graph

Graph of adjacent domain pairs.


Add or remove domain pairs

The links below permit the addition or removal of specific sets of domain combination pairs.


Jump to [ Top of page · Add/remove domain pairs · Domain combination pairs ]

Add or remove genomes

Change the list of genome two-letter codes in the 'Include genomes' box to include domain-pairs from those genomes.
Change the list of genomes in the 'Exclude genomes' box to exclude domain-pairs from those genomes.
List of all two-letter genome codes.

Add or remove genomes:
Include genomes:
Exclude genomes:


Jump to [ Top of page · Add/remove domain pairs · Add/remove genomes ]

Domain combination pairs

1299 domain combination pairs.
Click on a column heading to sort that column, or the 'View' button to see domain architetures for that domain pair combination.

Superfamily (N) Superfamily (C) Number of occurrances Number unique
P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases 8740
RNA-binding domain, RBD RNA-binding domain, RBD 3316
TPR-like TPR-like 2413
NAD(P)-binding Rossmann-fold domains GroES-like 2412
ARM repeat ARM repeat 2113
Actin-like ATPase domain Actin-like ATPase domain 218
P-loop containing nucleoside triphosphate hydrolases Translation proteins 2011
(Trans)glycosidases Glycosyl hydrolase domain 2012
Thioredoxin-like GST C-terminal domain-like 194
Calcium ATPase, transduction domain A HAD-like 199
Thiolase-like Thiolase-like 185
Calcium ATPase, transduction domain A Calcium ATPase, transmembrane domain M 188
HAD-like Calcium ATPase, transmembrane domain M 188
ABC transporter transmembrane region P-loop containing nucleoside triphosphate hydrolases 159
NAD(P)-binding Rossmann-fold domains Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 156
NAD(P)-binding Rossmann-fold domains 6-phosphogluconate dehydrogenase C-terminal domain-like 144
Nucleic acid-binding proteins Nucleic acid-binding proteins 1412
Galactose-binding domain-like (Trans)glycosidases 147
DNA-binding domain DNA-binding domain 138
ISP domain Bet v1-like 125
Riboflavin synthase domain-like Ferredoxin reductase-like, C-terminal NADP-linked domain 127
NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains 1210
Aminoacid dehydrogenase-like, N-terminal domain NAD(P)-binding Rossmann-fold domains 115
GroEL-intermediate domain like GroEL apical domain-like 112
FAD/NAD(P)-binding domain FAD-linked reductases, C-terminal domain 115
GroEL equatorial domain-like GroEL-intermediate domain like 112
GroEL equatorial domain-like GroEL apical domain-like 112
SET domain RuBisCo LSMT C-terminal, substrate-binding domain 113
Nucleotidylyl transferase Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 118
ACP-like NAD(P)-binding Rossmann-fold domains 1110
Purple acid phosphatase, N-terminal domain Metallo-dependent phosphatases 107
FAD/NAD(P)-binding domain FAD/NAD(P)-binding domain 106
RING/U-box RING/U-box 108
Thiolase-like ACP-like 109
Metal cation-transporting ATPase, ATP-binding domain N HAD-like 103
Cyclin-like Cyclin-like 107
Barwin-like endoglucanases PHL pollen allergen 104
Nucleic acid-binding proteins P-loop containing nucleoside triphosphate hydrolases 105
Calcium ATPase, transduction domain A Metal cation-transporting ATPase, ATP-binding domain N 103
Glutathione synthetase ATP-binding domain-like PreATP-grasp domain 1010
S-adenosyl-L-methionine-dependent methyltransferases NAD(P)-binding Rossmann-fold domains 98
FabD/lysophospholipase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 97
P-loop containing nucleoside triphosphate hydrolases FtsH protease domain-like 93
P-loop containing nucleoside triphosphate hydrolases EF-G C-terminal domain-like 95
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Ribosomal protein S5 domain 2-like 98
LuxS/MPP-like metallohydrolase LuxS/MPP-like metallohydrolase 95
Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) 94
Thiolase-like NAD(P)-binding Rossmann-fold domains 98
Ypt/Rab-GAP domain of gyp1p Ypt/Rab-GAP domain of gyp1p 94
Metal cation-transporting ATPase, ATP-binding domain N Calcium ATPase, transmembrane domain M 92
ARM repeat Protein kinase-like (PK-like) 98
EF-G C-terminal domain-like EF-G C-terminal domain-like 95
Translation proteins EF-G C-terminal domain-like 84
S-adenosyl-L-methionine-dependent methyltransferases ACP-like 87
DNA repair protein MutS, domain III P-loop containing nucleoside triphosphate hydrolases 86
S-adenosyl-L-methionine-dependent methyltransferases GroES-like 87
Thiolase-like GroES-like 87
Acyl-CoA dehydrogenase NM domain-like Acyl-CoA dehydrogenase C-terminal domain-like 84
Formate/glycerate dehydrogenase catalytic domain-like NAD(P)-binding Rossmann-fold domains 85
Thiolase-like S-adenosyl-L-methionine-dependent methyltransferases 87
ACP-like GroES-like 87
Trypsin-like serine proteases PDZ domain-like 85
HSP40/DnaJ peptide-binding domain HSP40/DnaJ peptide-binding domain 86
Cryptochrome/photolyase, N-terminal domain Cryptochrome/photolyase FAD-binding domain 85
Thioredoxin-like Thioredoxin-like 87
Class II aaRS and biotin synthetases Class II aaRS ABD-related 86
Translation proteins EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 72
FabD/lysophospholipase-like NAD(P)-binding Rossmann-fold domains 76
FAD/NAD(P)-binding domain FAD/NAD-linked reductases, dimerisation (C-terminal) domain 73
Galactose-binding domain-like beta-Galactosidase/glucuronidase domain 75
FabD/lysophospholipase-like S-adenosyl-L-methionine-dependent methyltransferases 76
ACT-like ACT-like 76
Probable ACP-binding domain of malonyl-CoA ACP transacylase S-adenosyl-L-methionine-dependent methyltransferases 76
Protein kinase-like (PK-like) EF-hand 72
Probable ACP-binding domain of malonyl-CoA ACP transacylase GroES-like 76
Galactose mutarotase-like (Trans)glycosidases 76
beta-Galactosidase/glucuronidase domain (Trans)glycosidases 75
Probable ACP-binding domain of malonyl-CoA ACP transacylase NAD(P)-binding Rossmann-fold domains 76
P-loop containing nucleoside triphosphate hydrolases Ribosomal protein S5 domain 2-like 75
Thiolase-like FabD/lysophospholipase-like 76
F-box domain RNI-like 75
WD40 repeat-like WD40 repeat-like 76
Zn-dependent exopeptidases Bacterial exopeptidase dimerisation domain 72
FabD/lysophospholipase-like GroES-like 76
P-loop containing nucleoside triphosphate hydrolases RING/U-box 74
Glutathione synthetase ATP-binding domain-like Rudiment single hybrid motif 77
PreATP-grasp domain Rudiment single hybrid motif 77
P-loop containing nucleoside triphosphate hydrolases EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 72
Ribonuclease H-like DNA/RNA polymerases 75
Chaperone J-domain HSP40/DnaJ peptide-binding domain 75
Clc chloride channel CBS-domain pair 75
Thiolase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 76
Probable ACP-binding domain of malonyl-CoA ACP transacylase ACP-like 76
FabD/lysophospholipase-like ACP-like 76
L domain-like L domain-like 65
NAD(P)-binding Rossmann-fold domains Trimeric LpxA-like enzymes 65
ValRS/IleRS/LeuRS editing domain Nucleotidylyl transferase 64
Actin-like ATPase domain Heat shock protein 70kD (HSP70), C-terminal subdomain 63
Thiolase-like Trimeric LpxA-like enzymes 65
S-adenosyl-L-methionine-dependent methyltransferases S-adenosyl-L-methionine-dependent methyltransferases 65
EF-hand EF-hand 64
NAD(P)-binding Rossmann-fold domains LDH C-terminal domain-like 61
FYVE/PHD zinc finger FYVE/PHD zinc finger 64
E set domains (Trans)glycosidases 64
Multidrug resistance efflux transporter EmrE Multidrug resistance efflux transporter EmrE 64
PLP-binding barrel Alanine racemase C-terminal domain-like 63
Nucleotidyltransferase PAP/OAS1 substrate-binding domain 65
FabD/lysophospholipase-like Trimeric LpxA-like enzymes 65
Tubulin nucleotide-binding domain-like Tubulin C-terminal domain-like 62
GroES-like Trimeric LpxA-like enzymes 65
ACP-like Trimeric LpxA-like enzymes 65
Probable ACP-binding domain of malonyl-CoA ACP transacylase Trimeric LpxA-like enzymes 65
Fe,Mn superoxide dismutase (SOD), N-terminal domain Fe,Mn superoxide dismutase (SOD), C-terminal domain 62
Galactose mutarotase-like Glycosyl hydrolase domain 65
L domain-like Protein kinase-like (PK-like) 65
S-adenosyl-L-methionine-dependent methyltransferases Trimeric LpxA-like enzymes 65
Actin-like ATPase domain Heat shock protein 70kD (HSP70), peptide-binding domain 63
Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 65
ValRS/IleRS/LeuRS editing domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 64
Homeodomain-like Homeodomain-like 66
alpha/beta-Hydrolases alpha/beta-Hydrolases 66
GAF domain-like Protein kinase-like (PK-like) 64
Ribosomal protein S5 domain 2-like Ribonuclease PH domain 2-like 62
P-loop containing nucleoside triphosphate hydrolases post-AAA+ oligomerization domain-like 52
RCC1/BLIP-II RCC1/BLIP-II 54
SNARE-like SNARE fusion complex 51
Single hybrid motif CoA-dependent acyltransferases 54
WD40 repeat-like Quinoprotein alcohol dehydrogenase-like 54
Nucleic acid-binding proteins Class II aaRS and biotin synthetases 54
Peptidase/esterase 'gauge' domain alpha/beta-Hydrolases 53
vWA-like Helical domain of Sec23/24 55
PK beta-barrel domain-like Phosphoenolpyruvate/pyruvate domain 52
Kelch motif Kelch motif 54
Trimeric LpxA-like enzymes Trimeric LpxA-like enzymes 54
C2 domain (Calcium/lipid-binding domain, CaLB) C2 domain (Calcium/lipid-binding domain, CaLB) 54
P-loop containing nucleoside triphosphate hydrolases Smc hinge domain 54
Phosphoenolpyruvate/pyruvate domain PK C-terminal domain-like 52
beta-sandwich domain of Sec23/24 Helical domain of Sec23/24 55
PDZ domain-like ClpP/crotonase 52
Translation proteins SH3-like domain Nucleic acid-binding proteins 54
Phosphoglucomutase, first 3 domains Phosphoglucomutase, first 3 domains 55
Ribosomal protein S5 domain 2-like GHMP Kinase, C-terminal domain 54
E set domains Glycosyl hydrolase domain 53
Heat shock protein 70kD (HSP70), peptide-binding domain Heat shock protein 70kD (HSP70), C-terminal subdomain 52
vWA-like beta-sandwich domain of Sec23/24 55
Translation proteins Ribosomal protein S5 domain 2-like 53
Thiamin diphosphate-binding fold (THDP-binding) TK C-terminal domain-like 52
CRAL/TRIO N-terminal domain CRAL/TRIO domain 53
PK beta-barrel domain-like PK C-terminal domain-like 52
EF-G C-terminal domain-like Ribosomal protein S5 domain 2-like 53
"Winged helix" DNA-binding domain "Winged helix" DNA-binding domain 55
Composite domain of metallo-dependent hydrolases Metallo-dependent hydrolases 43
Eukaryotic type KH-domain (KH-domain type I) Eukaryotic type KH-domain (KH-domain type I) 44
Acetyl-CoA synthetase-like ACP-like 44
ABC transporter transmembrane region ABC transporter transmembrane region 44
Helical domain of Sec23/24 C-terminal, gelsolin-like domain of Sec23/24 44
HMA, heavy metal-associated domain HAD-like 44
beta-sandwich domain of Sec23/24 C-terminal, gelsolin-like domain of Sec23/24 44
Nucleotide-diphospho-sugar transferases Six-hairpin glycosidases 41
P-loop containing nucleoside triphosphate hydrolases TGS-like 42
Cullin homology domain "Winged helix" DNA-binding domain 42
Class II aaRS and biotin synthetases ThrRS/AlaRS common domain 44
SNARE-like Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor 42
DNA/RNA polymerases Lesion bypass DNA polymerase (Y-family), little finger domain 43
Single hybrid motif Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 43
P-loop containing nucleoside triphosphate hydrolases "Winged helix" DNA-binding domain 44
Double Clp-N motif P-loop containing nucleoside triphosphate hydrolases 43
PYP-like sensor domain (PAS domain) PYP-like sensor domain (PAS domain) 44
Glutamine synthetase, N-terminal domain Glutamine synthetase/guanido kinase 42
Cupredoxins Cupredoxins 44
Voltage-gated potassium channels cAMP-binding domain-like 43
Ubiquitin-like Ubiquitin-like 44
Zn-finger domain of Sec23/24 beta-sandwich domain of Sec23/24 44
Zn-finger domain of Sec23/24 Helical domain of Sec23/24 44
HMA, heavy metal-associated domain Calcium ATPase, transduction domain A 44
vWA-like C-terminal, gelsolin-like domain of Sec23/24 44
RNI-like RNI-like 42
Amine oxidase N-terminal region Amine oxidase catalytic domain 43
PIN domain-like 5' to 3' exonuclease, C-terminal subdomain 44
ARM repeat Clathrin adaptor appendage domain 43
P-loop containing nucleoside triphosphate hydrolases Hypothetical protein YjiA, C-terminal domain 42
RNI-like L domain-like 43
PYP-like sensor domain (PAS domain) Protein kinase-like (PK-like) 43
Zn-finger domain of Sec23/24 vWA-like 44
Sigma2 domain of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 43
cAMP-binding domain-like cAMP-binding domain-like 44
DNA ligase/mRNA capping enzyme, catalytic domain Nucleic acid-binding proteins 43
DNA repair protein MutS, domain I P-loop containing nucleoside triphosphate hydrolases 44
Amine oxidase N-terminal region Amine oxidase N-terminal region 43
Tudor/PWWP/MBT Tudor/PWWP/MBT 44
Leukotriene A4 hydrolase N-terminal domain Metalloproteases ("zincins"), catalytic domain 43
P-loop containing nucleoside triphosphate hydrolases Sec63 N-terminal domain-like 44
Chlorophyll a-b binding protein Chlorophyll a-b binding protein 41
HMA, heavy metal-associated domain Calcium ATPase, transmembrane domain M 44
E set domains E set domains 44
Mechanosensitive channel protein MscS (YggB), transmembrane region Sm-like ribonucleoproteins 43
Acyl-CoA dehydrogenase C-terminal domain-like Acyl-CoA dehydrogenase C-terminal domain-like 42
Thiamin diphosphate-binding fold (THDP-binding) DHS-like NAD/FAD-binding domain 41
HD-domain/PDEase-like Nucleotidyltransferase 44
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex CoA-dependent acyltransferases 43
HCP-like HCP-like 32
DNA repair protein MutS, domain II P-loop containing nucleoside triphosphate hydrolases 33
DPP6 N-terminal domain-like WD40 repeat-like 33
Zn-finger domain of Sec23/24 C-terminal, gelsolin-like domain of Sec23/24 33
E set domains Cytochrome b5-like heme/steroid binding domain 33
ATP-dependent DNA ligase DNA-binding domain Nucleic acid-binding proteins 32
RNA-binding domain, RBD Ran binding protein zinc finger-like 33
Sec63 N-terminal domain-like E set domains 33
P-loop containing nucleoside triphosphate hydrolases Initiation factor IF2/eIF5b, domain 3 33
FAD-binding/transporter-associated domain-like CO dehydrogenase molybdoprotein N-domain-like 33
FAD-binding/transporter-associated domain-like Molybdenum cofactor-binding domain 33
Homodimeric domain of signal transducing histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 33
NAD(P)-binding Rossmann-fold domains ACT-like 33
DNA repair protein MutS, domain II DNA repair protein MutS, domain III 33
CO dehydrogenase ISP C-domain like CO dehydrogenase molybdoprotein N-domain-like 33
Flavoproteins Riboflavin synthase domain-like 32
S-adenosyl-L-methionine-dependent methyltransferases E set domains 32
GroES-like GroES-like 32
P-loop containing nucleoside triphosphate hydrolases RNA-binding domain, RBD 32
dsRNA-binding domain-like Ribosomal protein S5 domain 2-like 32
Voltage-gated potassium channels E set domains 33
Cullin repeat-like Cullin homology domain 31
CO dehydrogenase molybdoprotein N-domain-like Molybdenum cofactor-binding domain 33
DnaJ/Hsp40 cysteine-rich domain HSP40/DnaJ peptide-binding domain 33
Cdc48 domain 2-like P-loop containing nucleoside triphosphate hydrolases 32
BEACH domain WD40 repeat-like 32
TPR-like Chaperone J-domain 33
Nucleotide-diphospho-sugar transferases Trimeric LpxA-like enzymes 32
MurD-like peptide ligases, catalytic domain MurD-like peptide ligases, peptide-binding domain 33
GAF domain-like PYP-like sensor domain (PAS domain) 32
CO dehydrogenase ISP C-domain like Molybdenum cofactor-binding domain 33
P-loop containing nucleoside triphosphate hydrolases Retrovirus zinc finger-like domains 33
RING/U-box Cysteine proteinases 33
N-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase 32
Insert subdomain of RNA polymerase alpha subunit RBP11-like subunits of RNA polymerase 32
UBA-like UBA-like 33
ClpP/crotonase ClpP/crotonase 32
HMG-box HMG-box 32
Chaperone J-domain 4Fe-4S ferredoxins 33
Ubiquitin-like UBA-like 33
Flavoproteins Ferredoxin reductase-like, C-terminal NADP-linked domain 32
P-loop containing nucleoside triphosphate hydrolases C-terminal domain of alpha and beta subunits of F1 ATP synthase 32
TSP-1 type 1 repeat TSP-1 type 1 repeat 33
EF-hand Mitochondrial carrier 32
N-terminal domain of alpha and beta subunits of F1 ATP synthase P-loop containing nucleoside triphosphate hydrolases 32
RING/U-box WD40 repeat-like 32
Oxidoreductase molybdopterin-binding domain E set domains 33
Chaperone J-domain DnaJ/Hsp40 cysteine-rich domain 33
"Winged helix" DNA-binding domain S-adenosyl-L-methionine-dependent methyltransferases 31
Creatinase/prolidase N-terminal domain Creatinase/aminopeptidase 33
GINS helical bundle-like PriA/YqbF domain 32
Glutathione synthetase ATP-binding domain-like Single hybrid motif 33
EF-hand P-loop containing nucleoside triphosphate hydrolases 33
CO dehydrogenase ISP C-domain like FAD-binding/transporter-associated domain-like 33
Oxidoreductase molybdopterin-binding domain Cytochrome b5-like heme/steroid binding domain 33
Initiation factor IF2/eIF5b, domain 3 Translation proteins 33
Cullin repeat-like "Winged helix" DNA-binding domain 31
P-loop containing nucleoside triphosphate hydrolases FYVE/PHD zinc finger 33
CCCH zinc finger RING/U-box 33
Ribosomal L11/L12e N-terminal domain Ribosomal protein L11, C-terminal domain 31
ATP-dependent DNA ligase DNA-binding domain DNA ligase/mRNA capping enzyme, catalytic domain 32
Ribosomal protein S5 domain 2-like HSP90 C-terminal domain 32
Phosphoglucomutase, first 3 domains Phosphoglucomutase, C-terminal domain 33
PurM N-terminal domain-like PurM C-terminal domain-like 33
Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like 32
DNA repair protein MutS, domain I DNA repair protein MutS, domain III 33
Ribosomal L27 protein-like Nucleic acid-binding proteins 32
Eukaryotic type KH-domain (KH-domain type I) Nucleic acid-binding proteins 32
Ribosomal protein L6 Ribosomal protein L6 32
FYVE/PHD zinc finger ARID-like 33
FAD-binding/transporter-associated domain-like FAD-linked oxidases, C-terminal domain 32
Domain of the SRP/SRP receptor G-proteins P-loop containing nucleoside triphosphate hydrolases 33
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase HSP90 C-terminal domain 32
Ankyrin repeat Protein kinase-like (PK-like) 32
Rudiment single hybrid motif Single hybrid motif 33
PreATP-grasp domain Single hybrid motif 33
PA domain Galactose-binding domain-like 21
Nitrite/Sulfite reductase N-terminal domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 22
2Fe-2S ferredoxin-like FAD-binding/transporter-associated domain-like 22
P-loop containing nucleoside triphosphate hydrolases Prokaryotic type KH domain (KH-domain type II) 22
F1F0 ATP synthase subunit C F1F0 ATP synthase subunit C 21
Sec7 domain ARM repeat 21
P-loop containing nucleoside triphosphate hydrolases Ribonuclease H-like 22
WW domain FF domain 22
TPR-like RING/U-box 22
Aldolase NAD(P)-binding Rossmann-fold domains 21
TPR-like HCP-like 22
Concanavalin A-like lectins/glucanases Concanavalin A-like lectins/glucanases 22
ARM repeat Subdomain of clathrin and coatomer appendage domain 22
ARM repeat WD40 repeat-like 22
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Alpha subunit of glutamate synthase, C-terminal domain 22
S-adenosyl-L-methionine-dependent methyltransferases (Trans)glycosidases 22
ACP-like alpha/beta-Hydrolases 22
PA domain EGF/Laminin 22
Aldolase Aminoacid dehydrogenase-like, N-terminal domain 21
Rhodanese/Cell cycle control phosphatase Rhodanese/Cell cycle control phosphatase 22
FAS1 domain FAS1 domain 22
P-loop containing nucleoside triphosphate hydrolases Glucocorticoid receptor-like (DNA-binding domain) 22
ADC-like P-loop containing nucleoside triphosphate hydrolases 21
Dimerization-anchoring domain of cAMP-dependent PK regulatory subunit Enolase N-terminal domain-like 21
EF-hand Sm-like ribonucleoproteins 21
alpha/beta-Hydrolases Galactose-binding domain-like 22
Glutathione synthetase ATP-binding domain-like Succinyl-CoA synthetase domains 21
Translation proteins ThrRS/AlaRS common domain 22
2Fe-2S ferredoxin-like Molybdenum cofactor-binding domain 22
CO dehydrogenase flavoprotein C-terminal domain-like Molybdenum cofactor-binding domain 22
N-terminal, heterodimerisation domain of RBP7 (RpoE) Nucleic acid-binding proteins 21
Class II aaRS ABD-related C-terminal domain of ProRS 21
DNA repair protein MutS, domain I DNA repair protein MutS, domain II 22
ThrRS/AlaRS common domain Class II aaRS ABD-related 22
Protein kinase-like (PK-like) Protein kinase-like (PK-like) 21
Nucleotidylyl transferase Ribosomal protein L25-like 22
lambda repressor-like DNA-binding domains Cyanase C-terminal domain 22
E set domains beta-sandwich domain of Sec23/24 21
Flavoproteins FMN-binding split barrel 21
CO dehydrogenase flavoprotein C-terminal domain-like CO dehydrogenase molybdoprotein N-domain-like 22
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Type II DNA topoisomerase 22
Ribonuclease H-like Nucleic acid-binding proteins 22
Class II aaRS and biotin synthetases C-terminal domain of ProRS 21
2Fe-2S ferredoxin-like CO dehydrogenase molybdoprotein N-domain-like 22
Enolase N-terminal domain-like Enolase C-terminal domain-like 21
Clathrin adaptor appendage domain Subdomain of clathrin and coatomer appendage domain 22
cAMP-binding domain-like Protein kinase-like (PK-like) 22
Phospholipase D/nuclease Phospholipase D/nuclease 22
beta-beta-alpha zinc fingers beta-beta-alpha zinc fingers 22
HAD-like BRCT domain 22
Trefoil Galactose mutarotase-like 22
Thioredoxin-like Ubiquitin-like 22
PX domain BAR/IMD domain-like 21
P-loop containing nucleoside triphosphate hydrolases Pre-protein crosslinking domain of SecA 22
beta-sandwich domain of Sec23/24 Nucleotidylyl transferase 21
C2 domain (Calcium/lipid-binding domain, CaLB) alpha/beta-Hydrolases 22
4'-phosphopantetheinyl transferase 4'-phosphopantetheinyl transferase 22
Tryptophan synthase beta subunit-like PLP-dependent enzymes ACT-like 21
DPP6 N-terminal domain-like Quinoprotein alcohol dehydrogenase-like 22
CBS-domain pair CBS-domain pair 21
2Fe-2S ferredoxin-like CO dehydrogenase ISP C-domain like 22
F-box domain L domain-like 22
Chromo domain-like P-loop containing nucleoside triphosphate hydrolases 22
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) Translation proteins 22
FMN-linked oxidoreductases Alpha subunit of glutamate synthase, C-terminal domain 22
Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 21
FYVE/PHD zinc finger RING/U-box 22
UDP-Glycosyltransferase/glycogen phosphorylase HAD-like 22
NAD(P)-binding Rossmann-fold domains UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 21
RING/U-box PUA domain-like 22
"Winged helix" DNA-binding domain E set domains 22
Cytochrome b5-like heme/steroid binding domain Ferredoxin reductase-like, C-terminal NADP-linked domain 22
Sec63 N-terminal domain-like Sec63 N-terminal domain-like 22
Trefoil Glycosyl hydrolase domain 22
Galactose-binding domain-like NAD(P)-binding Rossmann-fold domains 22
Ribonuclease H-like Ribonuclease H-like 22
UBC-like Endosomal sorting complex assembly domain 22
N-terminal domain of MutM-like DNA repair proteins S13-like H2TH domain 22
Tudor/PWWP/MBT SET domain 22
UBA-like Elongation factor Ts (EF-Ts), dimerisation domain 22
Carbamate kinase-like ACT-like 22
FF domain FF domain 22
Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 21
TPR-like "Winged helix" DNA-binding domain 21
Nitrite/Sulfite reductase N-terminal domain-like Nitrite/Sulfite reductase N-terminal domain-like 22
TGS-like Class II aaRS ABD-related 22
E set domains Nucleotidylyl transferase 21
Formate/glycerate dehydrogenase catalytic domain-like ACT-like 22
Coiled-coil domain of nucleotide exchange factor GrpE Head domain of nucleotide exchange factor GrpE 22
Ankyrin repeat HIT/MYND zinc finger-like 22
NAD(P)-binding Rossmann-fold domains alpha/beta-Hydrolases 22
SBT domain Ankyrin repeat 21
S-adenosyl-L-methionine-dependent methyltransferases Nucleotidylyl transferase 21
Transcription factor IIA (TFIIA), alpha-helical domain Transcription factor IIA (TFIIA), beta-barrel domain 22
Ubiquitin-like Cysteine proteinases 22
N-terminal nucleophile aminohydrolases (Ntn hydrolases) FMN-linked oxidoreductases 22
Trefoil (Trans)glycosidases 22
Obg GTP-binding protein N-terminal domain P-loop containing nucleoside triphosphate hydrolases 22
CHY zinc finger-like RING/U-box 22
S-adenosyl-L-methionine-dependent methyltransferases CBS-domain pair 21
2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain Alkaline phosphatase-like 21
PYP-like sensor domain (PAS domain) ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 22
PAZ domain Ribonuclease H-like 21
ARM repeat RING/U-box 22
beta-sandwich domain of Sec23/24 CBS-domain pair 21
CBS-domain pair cAMP-binding domain-like 22
Quinoprotein alcohol dehydrogenase-like Quinoprotein alcohol dehydrogenase-like 22
CHY zinc finger-like Zinc hairpin stack 22
TGS-like ThrRS/AlaRS common domain 22
PUA domain-like SET domain 22
TGS-like Class II aaRS and biotin synthetases 22
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 21
P-loop containing nucleoside triphosphate hydrolases Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain 21
Metallo-hydrolase/oxidoreductase Flavoproteins 21
NagB/RpiA/CoA transferase-like D-ribose-5-phosphate isomerase (RpiA), lid domain 21
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) ThrRS/AlaRS common domain 22
"Winged helix" DNA-binding domain Sec63 N-terminal domain-like 22
Translation proteins Translation proteins 22
Cation efflux protein transmembrane domain-like Cation efflux protein cytoplasmic domain-like 22
Nitrite and sulphite reductase 4Fe-4S domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 22
SET domain HIT/MYND zinc finger-like 22
Metallo-hydrolase/oxidoreductase FMN-binding split barrel 21
S-adenosyl-L-methionine-dependent methyltransferases Tudor/PWWP/MBT 22
Class II aaRS and biotin synthetases Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) 22
ADC-like Cdc48 domain 2-like 21
Cytochrome b5-like heme/steroid binding domain Riboflavin synthase domain-like 22
Fe-S cluster assembly (FSCA) domain-like Fe-S cluster assembly (FSCA) domain-like 22
ACP-like ACP-like 22
Tudor/PWWP/MBT P-loop containing nucleoside triphosphate hydrolases 22
Kelch motif HIT/MYND zinc finger-like 21
C2 domain (Calcium/lipid-binding domain, CaLB) Protein kinase-like (PK-like) 22
Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain SAICAR synthase-like 22
Retrovirus zinc finger-like domains Retrovirus zinc finger-like domains 22
P-loop containing nucleoside triphosphate hydrolases E set domains 22
ARM repeat POZ domain 22
PreATP-grasp domain PreATP-grasp domain 22
ISP transmembrane anchor ISP domain 21
POZ domain Kelch motif 22
Chromo domain-like Chromo domain-like 22
FAD-binding/transporter-associated domain-like CO dehydrogenase flavoprotein C-terminal domain-like 22
Translation initiation factor 2 beta, aIF2beta, N-terminal domain Zinc-binding domain of translation initiation factor 2 beta 22
Mechanosensitive channel protein MscS (YggB), transmembrane region Mechanosensitive channel protein MscS (YggB), C-terminal domain 22
Acetyl-CoA synthetase-like NAD(P)-binding Rossmann-fold domains 22
Ribosomal protein S5 domain 2-like Type II DNA topoisomerase 22
"Winged helix" DNA-binding domain E2F-DP heterodimerization region 22
E set domains Riboflavin synthase domain-like 22
tRNA-binding arm Class II aaRS and biotin synthetases 21
Surp module (SWAP domain) Surp module (SWAP domain) 22
PYP-like sensor domain (PAS domain) Homodimeric domain of signal transducing histidine kinase 22
P-loop containing nucleoside triphosphate hydrolases Signal peptide-binding domain 22
DNA clamp DNA clamp 21
PA domain Subtilisin-like 21
TPR-like Cyclin-like 22
PP2C-like Protein kinase-like (PK-like) 22
E set domains CBS-domain pair 21
Translational machinery components L30e-like 22
TPR-like HSP20-like chaperones 22
Dimerization-anchoring domain of cAMP-dependent PK regulatory subunit Enolase C-terminal domain-like 21
Oxidoreductase molybdopterin-binding domain Ferredoxin reductase-like, C-terminal NADP-linked domain 22
BRCT domain BRCT domain 22
DPP6 N-terminal domain-like alpha/beta-Hydrolases 21
Nucleotide cyclase Nucleotide cyclase 22
HMA, heavy metal-associated domain HMA, heavy metal-associated domain 22
WD40 repeat-like TPR-like 21
PsbU/PolX domain-like Nucleotidyltransferase 22
beta-Galactosidase/glucuronidase domain beta-Galactosidase/glucuronidase domain 22
RNA-binding domain, RBD PABC (PABP) domain 22
Clavaminate synthase-like Ubiquitin-like 22
UDP-Glycosyltransferase/glycogen phosphorylase UDP-Glycosyltransferase/glycogen phosphorylase 21
Ran binding protein zinc finger-like Ran binding protein zinc finger-like 22
P-loop containing nucleoside triphosphate hydrolases Class I glutamine amidotransferase-like 22
(Trans)glycosidases (Trans)glycosidases 22
Restriction endonuclease-like RuvA domain 2-like 22
CO dehydrogenase ISP C-domain like CO dehydrogenase flavoprotein C-terminal domain-like 22
UROD/MetE-like UROD/MetE-like 21
ARM repeat Ankyrin repeat 21
Thioesterase/thiol ester dehydrase-isomerase Thioesterase/thiol ester dehydrase-isomerase 22
CoA-dependent acyltransferases CoA-dependent acyltransferases 22
alpha-ketoacid dehydrogenase kinase, N-terminal domain ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 21
Ribosomal L27 protein-like Eukaryotic type KH-domain (KH-domain type I) 21
t-snare proteins SNARE fusion complex 21
Oxidoreductase molybdopterin-binding domain Riboflavin synthase domain-like 22
CCCH zinc finger CCCH zinc finger 22
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 21
E set domains Ferredoxin reductase-like, C-terminal NADP-linked domain 22
CBS-domain pair Nucleotidylyl transferase 21
Creatinase/aminopeptidase "Winged helix" DNA-binding domain 22
Zinc hairpin stack RING/U-box 22
6-phosphogluconate dehydrogenase C-terminal domain-like UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 21
Subtilisin-like Galactose-binding domain-like 21
ARM repeat P-loop containing nucleoside triphosphate hydrolases 21
Concanavalin A-like lectins/glucanases P-domain of calnexin/calreticulin 21
Eukaryotic type KH-domain (KH-domain type I) WW domain 22
S-adenosyl-L-methionine-dependent methyltransferases beta-sandwich domain of Sec23/24 21
Class II aaRS and biotin synthetases Translation proteins 22
Sm-like ribonucleoproteins Mechanosensitive channel protein MscS (YggB), C-terminal domain 22
Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain 11
dsRNA-binding domain-like dsRNA-binding domain-like 11
P-loop containing nucleoside triphosphate hydrolases HAD-like 11
cAMP-binding domain-like FabD/lysophospholipase-like 11
Nucleic acid-binding proteins RNA-binding domain, RBD 11
HMG-box Histone-fold 11
SAM/Pointed domain EF-hand 11
Clathrin heavy-chain terminal domain ARM repeat 11
4Fe-4S ferredoxins Formate dehydrogenase/DMSO reductase, domains 1-3 11
NTF2-like Probable bacterial effector-binding domain 11
L domain-like FabD/lysophospholipase-like 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Nucleotide-binding domain 11
Nudix S-adenosyl-L-methionine-dependent methyltransferases 11
Protein kinase-like (PK-like) Class II aaRS ABD-related 11
S-adenosyl-L-methionine-dependent methyltransferases alpha/beta-Hydrolases 11
NagB/RpiA/CoA transferase-like Protein kinase-like (PK-like) 11
Rhodanese/Cell cycle control phosphatase (Phosphotyrosine protein) phosphatases II 11
UBC-like Class II aaRS ABD-related 11
HAND domain of the nucleosome remodeling ATPase ISWI Homeodomain-like 11
Zinc beta-ribbon Cyclin-like 11
alpha/beta-Hydrolases Cytochrome P450 11
Macro domain-like Toll/Interleukin receptor TIR domain 11
Ankyrin repeat Acid phosphatase/Vanadium-dependent haloperoxidase 11
Cyclophilin-like Single hybrid motif 11
UraD-Like Transthyretin (synonym: prealbumin) 11
vWA-like Cysteine-rich domain 11
Tex N-terminal region-like SH2 domain 11
HIT/MYND zinc finger-like Cysteine proteinases 11
Ubiquitin-like Cap-Gly domain 11
Pre-PUA domain PUA domain-like 11
Ubiquitin-like BAG domain 11
Acetyl-CoA synthetase-like Quinoprotein alcohol dehydrogenase-like 11
RING/U-box Rhomboid-like 11
UBC-like Ribosomal protein S5 domain 2-like 11
DNA ligase/mRNA capping enzyme, catalytic domain BRCT domain 11
SNARE-like Domain of the SRP/SRP receptor G-proteins 11
Nucleic acid-binding proteins Aminoacid dehydrogenase-like, N-terminal domain 11
FMN-linked oxidoreductases Nucleotide-binding domain 11
WRKY DNA-binding domain WRKY DNA-binding domain 11
SAP domain WW domain 11
Chromo domain-like Acyl-CoA N-acyltransferases (Nat) 11
PreATP-grasp domain N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) 11
PRTase-like Ribulose-phoshate binding barrel 11
P-loop containing nucleoside triphosphate hydrolases vWA-like 11
FKBP-like TPR-like 11
SNARE-like P-loop containing nucleoside triphosphate hydrolases 11
Putative DNA-binding domain Cryptochrome/photolyase FAD-binding domain 11
Tex N-terminal region-like Nucleic acid-binding proteins 11
4Fe-4S ferredoxins Six-hairpin glycosidases 11
SAP domain PreATP-grasp domain 11
Chorismate lyase-like NAD(P)-binding Rossmann-fold domains 11
PUG domain-like Ubiquitin-like 11
FabD/lysophospholipase-like Cytochrome P450 11
Homeodomain-like FAD/NAD(P)-binding domain 11
Dihydrofolate reductase-like Thymidylate synthase/dCMP hydroxymethylase 11
TAZ domain TAZ domain 11
GST C-terminal domain-like Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) 11
PLP-dependent transferases PLP-dependent transferases 11
Carbon-nitrogen hydrolase Adenine nucleotide alpha hydrolases-like 11
TAF(II)230 TBP-binding fragment Bromodomain 11
Trimeric LpxA-like enzymes Cytochrome P450 11
Tropomyosin Tropomyosin 11
Eukaryotic RPB5 N-terminal domain RPB5-like RNA polymerase subunit 11
Ribosomal protein S5 domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
P-loop containing nucleoside triphosphate hydrolases alpha-D-mannose-specific plant lectins 11
P-loop containing nucleoside triphosphate hydrolases MOP-like 11
Trimeric LpxA-like enzymes (Trans)glycosidases 11
DNA-glycosylase Nudix 11
Galactose oxidase, central domain RING/U-box 11
Actin-like ATPase domain AF1104-like 11
Sigma3 and sigma4 domains of RNA polymerase sigma factors FAS1 domain 11
CCCH zinc finger RNA-binding domain, RBD 11
CheY-like Homeodomain-like 11
Activating enzymes of the ubiquitin-like proteins Invasin/intimin cell-adhesion fragments 11
E set domains Growth factor receptor domain 11
P-loop containing nucleoside triphosphate hydrolases Lipoxigenase 11
SPOC domain-like SAP domain 11
Glutathione synthetase ATP-binding domain-like N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) 11
FAD/NAD(P)-binding domain PurM N-terminal domain-like 11
RNase III domain-like dsRNA-binding domain-like 11
Translation initiation factor 2 beta, aIF2beta, N-terminal domain ARM repeat 11
Zinc beta-ribbon NTF2-like 11
SAM/Pointed domain CRAL/TRIO domain 11
Rudiment single hybrid motif ClpP/crotonase 11
Radical SAM enzymes Radical SAM enzymes 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase DNA mismatch repair protein MutL 11
PH domain-like HMG-box 11
Pseudouridine synthase PUA domain-like 11
Subtilisin-like Subtilisin-like 11
Thioredoxin-like TPR-like 11
cAMP-binding domain-like 4Fe-4S ferredoxins 11
"Winged helix" DNA-binding domain Periplasmic binding protein-like II 11
Folate-binding domain Aminomethyltransferase beta-barrel domain 11
Periplasmic binding protein-like II Protein kinase-like (PK-like) 11
ACP-like C-terminal autoproteolytic domain of nucleoporin nup98 11
P-loop containing nucleoside triphosphate hydrolases SNARE fusion complex 11
Kazal-type serine protease inhibitors Kazal-type serine protease inhibitors 11
Apolipoprotein A-I Apolipoprotein A-I 11
SWIB/MDM2 domain SWIB/MDM2 domain 11
PHM/PNGase F NHL repeat 11
PurS-like PurM C-terminal domain-like 11
Second domain of FERM PH domain-like 11
SufE/NifU NadA-like 11
HAD-like DNA polymerase beta, N-terminal domain-like 11
4Fe-4S ferredoxins Metallo-hydrolase/oxidoreductase 11
Ankyrin repeat RING/U-box 11
P-loop containing nucleoside triphosphate hydrolases HIT-like 11
Elongation factor Ts (EF-Ts), dimerisation domain Elongation factor Ts (EF-Ts), dimerisation domain 11
Retrovirus zinc finger-like domains DNA-binding domain 11
Nucleotide-diphospho-sugar transferases S-adenosyl-L-methionine-dependent methyltransferases 11
FYVE/PHD zinc finger SET domain 11
Hsp33 domain HSP33 redox switch-like 11
Fibronectin type III Fibronectin type III 11
Aconitase iron-sulfur domain LeuD/IlvD-like 11
P-loop containing nucleoside triphosphate hydrolases HAND domain of the nucleosome remodeling ATPase ISWI 11
PHM/PNGase F PHM/PNGase F 11
Surp module (SWAP domain) Ubiquitin-like 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase RING/U-box 11
Carbamate kinase-like Acyl-CoA N-acyltransferases (Nat) 11
Trigger factor ribosome-binding domain Triger factor/SurA peptide-binding domain-like 11
Serine metabolism enzymes domain ACT-like 11
Chaperone J-domain Ribonuclease H-like 11
NagB/RpiA/CoA transferase-like CheY-like 11
alpha/beta-Hydrolases Phosphoglycerate mutase-like 11
Clavaminate synthase-like Clavaminate synthase-like 11
Chlorophyll a-b binding protein ISP domain 11
(Trans)glycosidases EGF/Laminin 11
PheT/TilS domain Class II aaRS and biotin synthetases 11
SET domain NAD(P)-binding Rossmann-fold domains 11
Cytidine deaminase-like YbiA-like 11
Thioredoxin-like Six-hairpin glycosidases 11
SAP domain RNA-binding domain, RBD 11
Pectin lyase-like Pectin lyase-like 11
Bet v1-like Bet v1-like 11
Nucleic acid-binding proteins eIF-2-alpha, C-terminal domain 11
UBA-like XPC-binding domain 11
Cytochrome c Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor 11
SNARE fusion complex SNARE fusion complex 11
Putative DNA-binding domain Cryptochrome/photolyase, N-terminal domain 11
TAZ domain FYVE/PHD zinc finger 11
HIT/MYND zinc finger-like HIT/MYND zinc finger-like 11
PreATP-grasp domain post-HMGL domain-like 11
Fibronectin type III Nucleotide cyclase 11
WD40 repeat-like Tricorn protease domain 2 11
Ubiquitin-like HAD-like 11
Protein kinase-like (PK-like) Acyl-CoA dehydrogenase NM domain-like 11
F-box domain Clavaminate synthase-like 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) SIS domain 11
TATA-box binding protein-like TATA-box binding protein-like 11
Cytidine deaminase-like Cytidine deaminase-like 11
BSD domain-like BSD domain-like 11
Glycosyl hydrolase domain vWA-like 11
Transmembrane di-heme cytochromes a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 11
Chlorophyll a-b binding protein Bet v1-like 11
PUA domain-like P-loop containing nucleoside triphosphate hydrolases 11
Thioredoxin-like ERP29 C domain-like 11
Acyl-CoA N-acyltransferases (Nat) Acyl-CoA N-acyltransferases (Nat) 11
Galactose-binding domain-like ARM repeat 11
HAD-like Thioredoxin-like 11
TGS-like ACT-like 11
Fibronectin type III HSP20-like chaperones 11
RING/U-box Formin homology 2 domain (FH2 domain) 11
2Fe-2S ferredoxin-like CO dehydrogenase flavoprotein C-terminal domain-like 11
EF-hand Thioredoxin-like 11
Chaperone J-domain Fibronectin type III 11
ACP-like (Trans)glycosidases 11
FKBP-like Triger factor/SurA peptide-binding domain-like 11
P-loop containing nucleoside triphosphate hydrolases Helical scaffold and wing domains of SecA 11
SCP-like PP2C-like 11
Glycoside hydrolase/deacetylase Families 57/38 glycoside transferase middle domain 11
PRTase-like PRTase-like 11
EF-hand FAD-linked oxidoreductase 11
Ankyrin repeat Arginase/deacetylase 11
PP2C-like PP2C-like 11
Cyclophilin-like TPR-like 11
Prokaryotic type KH domain (KH-domain type II) Ribosomal protein S3 C-terminal domain 11
Protein kinase-like (PK-like) HMG-box 11
Acyl-CoA N-acyltransferases (Nat) Bromodomain 11
Ribosomal protein L7/12, oligomerisation (N-terminal) domain ClpS-like 11
SAICAR synthase-like SAICAR synthase-like 11
PRP4-like WD40 repeat-like 11
UBA-like Thioredoxin-like 11
beta-beta-alpha zinc fingers L30e-like 11
ARID-like Clavaminate synthase-like 11
Arabinanase/levansucrase/invertase Concanavalin A-like lectins/glucanases 11
Glutathione synthetase ATP-binding domain-like Glutathione synthetase ATP-binding domain-like 11
(Phosphotyrosine protein) phosphatases II DNA ligase/mRNA capping enzyme, catalytic domain 11
P-loop containing nucleoside triphosphate hydrolases ISP domain 11
Periplasmic binding protein-like II GlnB-like 11
Calponin-homology domain, CH-domain P-loop containing nucleoside triphosphate hydrolases 11
Protein kinase-like (PK-like) Class II aaRS and biotin synthetases 11
SpoIIaa-like cAMP-binding domain-like 11
CCCH zinc finger WW domain 11
Aldolase 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 11
BAR/IMD domain-like PH domain-like 11
Cysteine proteinases Sec-C motif 11
alpha/beta-Hydrolases Glycerol-3-phosphate (1)-acyltransferase 11
E set domains Ankyrin repeat 11
vWA-like SPOC domain-like 11
Protein kinase-like (PK-like) WD40 repeat-like 11
Cysteine proteinases Granulin repeat 11
RNA-binding domain, RBD DPP6 N-terminal domain-like 11
SAP domain P-loop containing nucleoside triphosphate hydrolases 11
Lipase/lipooxygenase domain (PLAT/LH2 domain) Lipoxigenase 11
Thioredoxin-like Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) 11
C2 domain (Calcium/lipid-binding domain, CaLB) ARM repeat 11
NAD(P)-binding Rossmann-fold domains (Trans)glycosidases 11
Ankyrin repeat PP2C-like 11
R3H domain P-loop containing nucleoside triphosphate hydrolases 11
GST C-terminal domain-like Nucleic acid-binding proteins 11
Endosomal sorting complex assembly domain VPS28 C-terminal domain-like 11
VPA0735-like FAD/NAD(P)-binding domain 11
PGBD-like PGBD-like 11
RING/U-box Nudix 11
Alpha-L RNA-binding motif Pseudouridine synthase 11
post-HMGL domain-like Single hybrid motif 11
Putative DNA-binding domain Class II aaRS and biotin synthetases 11
Nucleotide-diphospho-sugar transferases SGNH hydrolase 11
Formyltransferase FMT C-terminal domain-like 11
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 11
ClpP/crotonase 6-phosphogluconate dehydrogenase C-terminal domain-like 11
Concanavalin A-like lectins/glucanases RING/U-box 11
Thioredoxin-like ThrRS/AlaRS common domain 11
Trypsin-like serine proteases His-Me finger endonucleases 11
HAD-like NAD(P)-binding Rossmann-fold domains 11
Adenine nucleotide alpha hydrolases-like DHS-like NAD/FAD-binding domain 11
Aldolase post-HMGL domain-like 11
Nucleotidylyl transferase Nucleic acid-binding proteins 11
Dcp2 domain-like Nudix 11
P-loop containing nucleoside triphosphate hydrolases TPR-like 11
Surp module (SWAP domain) ENTH/VHS domain 11
Homeodomain-like Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 11
P-loop containing nucleoside triphosphate hydrolases FAS1 domain 11
Thiolase-like (Trans)glycosidases 11
FAD/NAD(P)-binding domain EF-hand 11
Rudiment single hybrid motif Cyclophilin-like 11
PIN domain-like Aminoacid dehydrogenase-like, N-terminal domain 11
alpha/beta-Hydrolases Chorismate lyase-like 11
RUN domain-like PX domain 11
Zinc-binding domain of translation initiation factor 2 beta ARM repeat 11
Saposin Saposin 11
NAD(P)-binding Rossmann-fold domains Succinyl-CoA synthetase domains 11
PH domain-like Formin homology 2 domain (FH2 domain) 11
cAMP-binding domain-like P-loop containing nucleoside triphosphate hydrolases 11
Adenine nucleotide alpha hydrolases-like Molybdenum cofactor biosynthesis proteins 11
Chaperone J-domain CSL zinc finger 11
SMAD/FHA domain RING/U-box 11
Cysteine proteinases Protein kinase-like (PK-like) 11
GST C-terminal domain-like Class II aaRS and biotin synthetases 11
BRCT domain DNA/RNA polymerases 11
alpha/beta-Hydrolases Acetyl-CoA synthetase-like 11
Adenine nucleotide alpha hydrolases-like GMP synthetase C-terminal dimerisation domain 11
Formiminotransferase domain of formiminotransferase-cyclodeaminase. Formiminotransferase domain of formiminotransferase-cyclodeaminase. 11
TPR-like CAD & PB1 domains 11
GST C-terminal domain-like Translation proteins 11
ACT-like Glycosyl hydrolase domain 11
Thiolase-like alpha/beta-Hydrolases 11
FAD/NAD(P)-binding domain S-adenosyl-L-methionine-dependent methyltransferases 11
Penicillin binding protein dimerisation domain beta-lactamase/transpeptidase-like 11
L domain-like CBS-domain pair 11
Homing endonucleases Homing endonucleases 11
DNase I-like YrdC/RibB 11
R3H domain Ankyrin repeat 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
Methylglyoxal synthase-like Cytidine deaminase-like 11
Obg GTP-binding protein N-terminal domain Obg GTP-binding protein C-terminal domain 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Nucleotidylyl transferase 11
FAD/NAD(P)-binding domain PurM C-terminal domain-like 11
HAD-like Riboflavin kinase-like 11
S-adenosyl-L-methionine-dependent methyltransferases POZ domain 11
NAD(P)-binding Rossmann-fold domains Serine metabolism enzymes domain 11
PH domain-like ARM repeat 11
PurM N-terminal domain-like Class I glutamine amidotransferase-like 11
MFS general substrate transporter MFS general substrate transporter 11
UBC-like UBA-like 11
Activating enzymes of the ubiquitin-like proteins RCC1/BLIP-II 11
S-adenosylmethionine synthetase S-adenosylmethionine synthetase 11
vWA-like SAP domain 11
DAK1/DegV-like DhaL-like 11
P-loop containing nucleoside triphosphate hydrolases Obg GTP-binding protein C-terminal domain 11
Calponin-homology domain, CH-domain EB1 dimerisation domain-like 11
Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain E set domains 11
TPR-like Pectin lyase-like 11
ACT-like Protein kinase-like (PK-like) 11
DNA-glycosylase Chaperone J-domain 11
ACP-like Cytochrome P450 11
Prokaryotic type I DNA topoisomerase Retrovirus zinc finger-like domains 11
Cullin repeat-like Gated mechanosensitive channel 11
Translation proteins PRC-barrel domain 11
Riboflavin synthase domain-like Riboflavin synthase domain-like 11
UBA-like PUG domain-like 11
Cystatin/monellin Cystatin/monellin 11
RING/U-box HAD-like 11
Nucleotide-diphospho-sugar transferases ARM repeat 11
Nqo1 FMN-binding domain-like Nqo1C-terminal domain-like 11
SSo0622-like S-adenosyl-L-methionine-dependent methyltransferases 11
RNI-like L28p-like 11
Aminopeptidase/glucanase lid domain Zn-dependent exopeptidases 11
Elongation factor TFIIS domain 2 Zinc beta-ribbon 11
EF-G C-terminal domain-like Hypothetical protein YjiA, C-terminal domain 11
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 11
Nudix PHP14-like 11
alpha-helical ferredoxin Nucleotide-binding domain 11
Thioredoxin-like SAP domain 11
WD40 repeat-like Nucleotide-diphospho-sugar transferases 11
Nicotinate/Quinolinate PRTase N-terminal domain-like Nicotinate/Quinolinate PRTase C-terminal domain-like 11
Thiamin phosphate synthase P-loop containing nucleoside triphosphate hydrolases 11
Rhodanese/Cell cycle control phosphatase SMAD/FHA domain 11
Phosphoglycerate mutase-like Phosphoglycerate mutase-like 11
Rudiment single hybrid motif post-HMGL domain-like 11
L30e-like alpha/beta knot 11
NTF2-like Amidase signature (AS) enzymes 11
Dom34/Pelota N-terminal domain-like L30e-like 11
Periplasmic binding protein-like II Periplasmic binding protein-like II 11
ACT-like UDP-Glycosyltransferase/glycogen phosphorylase 11
Putative DNA-binding domain PheT/TilS domain 11
Ribonuclease H-like HRDC-like 11
IlvD/EDD N-terminal domain-like LeuD/IlvD-like 11
Glutathione synthetase ATP-binding domain-like Phosphoglycerate mutase-like 11
Putative DNA-binding domain Putative DNA-binding domain 11
P-loop containing nucleoside triphosphate hydrolases Phosphoglycerate mutase-like 11
Actin depolymerizing proteins Actin depolymerizing proteins 11
PRC-barrel domain PRC-barrel domain 11
FYVE/PHD zinc finger FAS1 domain 11
Ribonuclease PH domain 2-like Nucleic acid-binding proteins 11
EF-hand Clavaminate synthase-like 11
Ribosomal protein S5 domain 2-like Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 11
PUA domain-like Ribosomal protein S5 domain 2-like 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Nucleic acid-binding proteins 11
SET domain SET domain 11
Macro domain-like Zn-dependent exopeptidases 11
FAD/NAD(P)-binding domain Acyl-CoA N-acyltransferases (Nat) 11
ARID-like ARM repeat 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Periplasmic binding protein-like II ACT-like 11
Nucleotidylyl transferase An anticodon-binding domain of class I aminoacyl-tRNA synthetases 11
ENTH/VHS domain GAT-like domain 11
GST C-terminal domain-like ThrRS/AlaRS common domain 11
Ankyrin repeat Chromo domain-like 11
ACT-like Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 11
Amidase signature (AS) enzymes TPR-like 11
Thioredoxin-like Class II aaRS and biotin synthetases 11
Tudor/PWWP/MBT DNA repair protein MutS, domain I 11
Class II aaRS and biotin synthetases HD-domain/PDEase-like 11
Nucleic acid-binding proteins eIF2alpha middle domain-like 11
FAD-linked reductases, C-terminal domain 4Fe-4S ferredoxins 11
PurM C-terminal domain-like Class I glutamine amidotransferase-like 11
WD40 repeat-like Cyclophilin-like 11
Nucleotidylyl transferase Nucleotidylyl transferase 11
WD40 repeat-like RNA-binding domain, RBD 11
Rudiment single hybrid motif PH0987 N-terminal domain-like 11
SET domain Retrovirus zinc finger-like domains 11
RING/U-box NAD(P)-binding Rossmann-fold domains 11
Glutathione synthetase ATP-binding domain-like Cyclophilin-like 11
Nucleic acid-binding proteins GAD domain-like 11
Tex N-terminal region-like RuvA domain 2-like 11
FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) Protein kinase-like (PK-like) 11
6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 11
Thioredoxin-like Translation proteins 11
ENTH/VHS domain ArfGap/RecO-like zinc finger 11
Protein kinase-like (PK-like) Acyl-CoA dehydrogenase C-terminal domain-like 11
vWA-like Formin homology 2 domain (FH2 domain) 11
DEK C-terminal domain SWIB/MDM2 domain 11
RING/U-box R3H domain 11
GYF domain RNA-binding domain, RBD 11
Translation initiation factor IF3, N-terminal domain Translation initiation factor IF3, C-terminal domain 11
Ubiquitin-like XPC-binding domain 11
6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK Dihydropteroate synthetase-like 11
(Phosphotyrosine protein) phosphatases II Nucleic acid-binding proteins 11
Molybdenum cofactor-binding domain Molybdenum cofactor-binding domain 11
Thiolase-like Mitochondrial carrier 11
HisI-like all-alpha NTP pyrophosphatases 11
2Fe-2S ferredoxin-like Formate dehydrogenase/DMSO reductase, domains 1-3 11
Nucleic acid-binding proteins "Winged helix" DNA-binding domain 11
Starch-binding domain-like Starch-binding domain-like 11
Fe-S cluster assembly (FSCA) domain-like P-loop containing nucleoside triphosphate hydrolases 11
S-adenosyl-L-methionine-dependent methyltransferases Riboflavin kinase-like 11
ARM repeat Formin homology 2 domain (FH2 domain) 11
Families 57/38 glycoside transferase middle domain Galactose mutarotase-like 11
PurS-like Class I glutamine amidotransferase-like 11
alpha/beta-Hydrolases beta-Galactosidase/glucuronidase domain 11
MoeA N-terminal region -like MoeA C-terminal domain-like 11
Acetyl-CoA synthetase-like CoA-dependent acyltransferases 11
ACT-like vWA-like 11
MIT domain P-loop containing nucleoside triphosphate hydrolases 11
Bromodomain Bromodomain 11
PurS-like PurM N-terminal domain-like 11
alpha/beta knot Nucleic acid-binding proteins 11
PH domain-like RCC1/BLIP-II 11
Radical SAM enzymes Acyl-CoA N-acyltransferases (Nat) 11
PH0987 N-terminal domain-like Single hybrid motif 11
RNA-binding domain, RBD ENTH/VHS domain 11
Zinc beta-ribbon Protein kinase-like (PK-like) 11
Rhomboid-like UBA-like 11
Nqo1 middle domain-like Nqo1C-terminal domain-like 11
RuvA domain 2-like Nucleic acid-binding proteins 11
Alpha-L RNA-binding motif S-adenosyl-L-methionine-dependent methyltransferases 11
GST C-terminal domain-like Ribosomal protein L25-like 11
RING/U-box GroES-like 11
Metallo-hydrolase/oxidoreductase Activator of Hsp90 ATPase, Aha1 11
F-box domain Cyclin-like 11
Dom34/Pelota N-terminal domain-like Translational machinery components 11
EF-hand TPR-like 11
PLP-dependent transferases MOSC N-terminal domain-like 11
Thioredoxin-like eEF1-gamma domain 11
RmlC-like cupins RmlC-like cupins 11
S-adenosyl-L-methionine-dependent methyltransferases Clavaminate synthase-like 11
FYSH domain Hypothetical protein AF0491, middle domain 11
Homodimeric domain of signal transducing histidine kinase CheY-like 11
Clavaminate synthase-like TPR-like 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Adenine nucleotide alpha hydrolases-like 11
Ribonuclease PH domain 2-like Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 11
CBS-domain pair Clavaminate synthase-like 11
BRCA2 helical domain Nucleic acid-binding proteins 11
SSo0622-like Clavaminate synthase-like 11
ACT-like (Trans)glycosidases 11
ACP-like CoA-dependent acyltransferases 11
FAD-linked oxidases, C-terminal domain alpha-helical ferredoxin 11
Barwin-like endoglucanases Protein kinase-like (PK-like) 11
POZ domain Skp1 dimerisation domain-like 11
Cryptochrome/photolyase, N-terminal domain alpha/beta-Hydrolases 11
Carbamate kinase-like NAD(P)-binding Rossmann-fold domains 11
PDZ domain-like PDZ domain-like 11
Chaperone J-domain DNA/RNA polymerases 11
Carbamate kinase-like Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 11
Zn-dependent exopeptidases HSP20-like chaperones 11
Tetrahydrobiopterin biosynthesis enzymes-like Tetrahydrobiopterin biosynthesis enzymes-like 11
UBC-like UBC-like 11
Nucleotidylyl transferase tRNA-binding arm 11
TRAF domain-like TRAF domain-like 11
P-loop containing nucleoside triphosphate hydrolases CRAL/TRIO domain 11
ARM repeat TPR-like 11
Growth factor receptor domain EGF/Laminin 11
PurS-like FGAM synthase PurL, linker domain 11
Cyclophilin-like RNA-binding domain, RBD 11
UDP-Glycosyltransferase/glycogen phosphorylase Ribosomal protein S5 domain 2-like 11
PA domain Growth factor receptor domain 11
Nucleotidyltransferase PAP/Archaeal CCA-adding enzyme, C-terminal domain 11
beta-Galactosidase/glucuronidase domain Galactose mutarotase-like 11
NAD(P)-binding Rossmann-fold domains PP2C-like 11
Thioredoxin-like NHL repeat 11
TRAF domain-like POZ domain 11
Cyclophilin-like PH0987 N-terminal domain-like 11
DNA-binding domain EF-hand 11
Chaperone J-domain Six-hairpin glycosidases 11
Chaperone J-domain Thioredoxin-like 11
Heat shock protein 70kD (HSP70), C-terminal subdomain Heat shock protein 70kD (HSP70), C-terminal subdomain 11
Nqo1 FMN-binding domain-like Nqo1 middle domain-like 11
GroES-like (Trans)glycosidases 11
GST C-terminal domain-like eEF-1beta-like 11
Fumarylacetoacetate hydrolase, FAH, N-terminal domain FAH 11
YjeF N-terminal domain-like FMN-binding split barrel 11
FabD/lysophospholipase-like (Trans)glycosidases 11
Nucleic acid-binding proteins BRCT domain 11
Ubiquitin-like Zn-binding ribosomal proteins 11
Activating enzymes of the ubiquitin-like proteins (Phosphotyrosine protein) phosphatases II 11
PUA domain-like eIF1-like 11
ARM repeat FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) 11
YccV-like Glutathione synthetase ATP-binding domain-like 11
NAD(P)-binding Rossmann-fold domains C-terminal autoproteolytic domain of nucleoporin nup98 11
Protein kinase-like (PK-like) Cytochrome P450 11
Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain alpha/beta knot 11
Clavaminate synthase-like RmlC-like cupins 11
FAD/NAD(P)-binding domain NAD(P)-binding Rossmann-fold domains 11
Pre-protein crosslinking domain of SecA Helical scaffold and wing domains of SecA 11
Starch-binding domain-like (Trans)glycosidases 11
HD-domain/PDEase-like ACT-like 11
Ribosomal protein S5 domain 2-like Nucleic acid-binding proteins 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) NAD(P)-binding Rossmann-fold domains 11
Prokaryotic type I DNA topoisomerase Zinc beta-ribbon 11
Hypothetical protein SAV1430 Fe-S cluster assembly (FSCA) domain-like 11
Galactose-binding domain-like TPR-like 11
P-loop containing nucleoside triphosphate hydrolases Microbial and mitochondrial ADK, insert "zinc finger" domain 11
Type II DNA topoisomerase GyrA/ParC C-terminal domain-like 11
TrmE connector domain P-loop containing nucleoside triphosphate hydrolases 11
Carbamate kinase-like ALDH-like 11
SMAD/FHA domain FYVE/PHD zinc finger 11
RNA-binding domain, RBD Retrovirus zinc finger-like domains 11
Mitochondrial carrier Protein kinase-like (PK-like) 11
Glutathione synthetase ATP-binding domain-like PH0987 N-terminal domain-like 11
TAZ domain RING/U-box 11
WD40 repeat-like Bromodomain 11
ACT-like Formyltransferase 11
Arabinanase/levansucrase/invertase Arabinanase/levansucrase/invertase 11
Flavoproteins Radical SAM enzymes 11
Chaperone J-domain E set domains 11
GroES-like alpha/beta-Hydrolases 11
Probable ACP-binding domain of malonyl-CoA ACP transacylase Cytochrome P450 11
Ribosomal protein S5 domain 2-like DNA mismatch repair protein MutL 11
P-loop containing nucleoside triphosphate hydrolases WD40 repeat-like 11
NAD(P)-binding Rossmann-fold domains P-loop containing nucleoside triphosphate hydrolases 11
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 Eukaryotic type KH-domain (KH-domain type I) 11
PHL pollen allergen Protein kinase-like (PK-like) 11
Carbamoyl phosphate synthetase, large subunit connection domain Methylglyoxal synthase-like 11
NAD(P)-binding Rossmann-fold domains Protein kinase-like (PK-like) 11
SET domain Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 11
Aldolase Single hybrid motif 11
Acid proteases Saposin 11
NAD(P)-linked oxidoreductase NAD(P)-linked oxidoreductase 11
cAMP-binding domain-like Ankyrin repeat 11
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex Formin homology 2 domain (FH2 domain) 11
P-loop containing nucleoside triphosphate hydrolases Bet v1-like 11
PIN domain-like NAD(P)-binding Rossmann-fold domains 11
Nucleotidylyl transferase Alpha-L RNA-binding motif 11
Rudiment single hybrid motif N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) 11
PurM C-terminal domain-like PurM C-terminal domain-like 11
Carbamate kinase-like PUA domain-like 11
PUA domain-like Nucleotidylyl transferase 11
Thioredoxin-like FAD-dependent thiol oxidase 11
Class II aaRS and biotin synthetases Anticodon-binding domain of PheRS 11
NAD(P)-binding Rossmann-fold domains Cytochrome P450 11
Glucocorticoid receptor-like (DNA-binding domain) AN1-like Zinc finger 11
(Phosphotyrosine protein) phosphatases II (Phosphotyrosine protein) phosphatases II 11
P-loop containing nucleoside triphosphate hydrolases Formin homology 2 domain (FH2 domain) 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Formin homology 2 domain (FH2 domain) 11
P-loop containing nucleoside triphosphate hydrolases DNA/RNA polymerases 11
2Fe-2S ferredoxin-like alpha-helical ferredoxin 11
Ankyrin repeat S-adenosyl-L-methionine-dependent methyltransferases 11
Oxygen-evolving enhancer protein 3, Cyclophilin-like 11
Formate/glycerate dehydrogenase catalytic domain-like Formate/glycerate dehydrogenase catalytic domain-like 11
L domain-like Fibronectin type III 11
Glutathione synthetase ATP-binding domain-like Carbamoyl phosphate synthetase, large subunit connection domain 11
RING/U-box UBA-like 11
PYP-like sensor domain (PAS domain) CheY-like 11
RNI-like PP2C-like 11
Sigma2 domain of RNA polymerase sigma factors FAS1 domain 11
ARM repeat Cysteine proteinases 11
Diaminopimelate epimerase-like Diaminopimelate epimerase-like 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Nucleotidylyl transferase 11
FYVE/PHD zinc finger Clavaminate synthase-like 11
eIF2alpha middle domain-like eIF-2-alpha, C-terminal domain 11
PH domain-like WD40 repeat-like 11
Leukotriene A4 hydrolase N-terminal domain ARM repeat 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases Nucleic acid-binding proteins 11
CoA-dependent acyltransferases Formin homology 2 domain (FH2 domain) 11
NAD(P)-binding Rossmann-fold domains 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
Cytochrome P450 Phosphoglycerate mutase-like 11
Gated mechanosensitive channel Gated mechanosensitive channel 11
PEP carboxykinase N-terminal domain PEP carboxykinase-like 11
Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases 11
Eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment DNA breaking-rejoining enzymes 11
Glutathione synthetase ATP-binding domain-like Methylglyoxal synthase-like 11
Retrovirus zinc finger-like domains ABC transporter transmembrane region 11
PH domain-like BEACH domain 11
PAH2 domain PAH2 domain 11
DNA-binding domain FYVE/PHD zinc finger 11
Cytochrome b5-like heme/steroid binding domain Cytochrome b5-like heme/steroid binding domain 11
MOSC N-terminal domain-like PK beta-barrel domain-like 11
Ankyrin repeat P-loop containing nucleoside triphosphate hydrolases 11
Periplasmic binding protein-like II Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain 11
TATA-box binding protein-like DNA-glycosylase 11
Tudor/PWWP/MBT DNA repair protein MutS, domain III 11
Ribonuclease H-like RuvA domain 2-like 11
Molybdenum cofactor biosynthesis proteins MoeA C-terminal domain-like 11
Aquaporin-like Aquaporin-like 11
Nucleotide-diphospho-sugar transferases Nucleotide-diphospho-sugar transferases 11
Ribokinase-like Thiamin phosphate synthase 11
N-terminal domain of adenylylcyclase associated protein, CAP C-terminal domain of adenylylcyclase associated protein 11
FAD/NAD(P)-binding domain ISP domain 11
Kelch motif Metallo-dependent phosphatases 11
RING/U-box Homeodomain-like 11
PreATP-grasp domain ClpP/crotonase 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
Formin homology 2 domain (FH2 domain) NAD(P)-binding Rossmann-fold domains 11
Glutathione synthetase ATP-binding domain-like Aldolase 11
Barwin-like endoglucanases Barwin-like endoglucanases 11
S-adenosyl-L-methionine-dependent methyltransferases Cytochrome P450 11
PurM N-terminal domain-like PurM N-terminal domain-like 11
Mitochondrial carrier PHL pollen allergen 11
Ankyrin repeat RCC1/BLIP-II 11
PA domain RING/U-box 11
FGAM synthase PurL, linker domain Class I glutamine amidotransferase-like 11
Activator of Hsp90 ATPase, Aha1 Bet v1-like 11
Chaperone J-domain Tropomyosin 11
Ribonuclease PH domain 2-like Ribonuclease PH domain 2-like 11
Metalloproteases ("zincins"), catalytic domain HAD-like 11
Zinc beta-ribbon Zinc beta-ribbon 11
Second domain of FERM P-loop containing nucleoside triphosphate hydrolases 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases tRNA-binding arm 11
PreATP-grasp domain PH0987 N-terminal domain-like 11
Homeodomain-like FAD-linked reductases, C-terminal domain 11
FAD-binding/transporter-associated domain-like FAD-binding/transporter-associated domain-like 11
UBA-like SMR domain-like 11
(Phosphotyrosine protein) phosphatases II SMAD/FHA domain 11
SAP domain Eukaryotic type KH-domain (KH-domain type I) 11
RING/U-box Glucocorticoid receptor-like (DNA-binding domain) 11
Dihydrofolate reductase-like YbiA-like 11
Metalloproteases ("zincins"), catalytic domain ARM repeat 11
Taf5 N-terminal domain-like WD40 repeat-like 11
Alpha subunit of glutamate synthase, C-terminal domain Nucleotide-binding domain 11
ARID-like HSP20-like chaperones 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) PRTase-like 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase NAD(P)-binding Rossmann-fold domains 11
Pectin lyase-like Ribosomal protein S18 11
RING/U-box Cyclophilin-like 11
Chaperone J-domain Sec63 N-terminal domain-like 11
Histone-fold WD40 repeat-like 11
Zn-dependent exopeptidases Zn-dependent exopeptidases 11
MgtE N-terminal domain-like MgtE N-terminal domain-like 11
Tudor/PWWP/MBT FYVE/PHD zinc finger 11
Trigger factor ribosome-binding domain FKBP-like 11
PAP/OAS1 substrate-binding domain PAP/Archaeal CCA-adding enzyme, C-terminal domain 11
CBS-domain pair Inosine monophosphate dehydrogenase (IMPDH) 11
SAP domain FYVE/PHD zinc finger 11
Ankyrin repeat Chaperone J-domain 11
S-adenosyl-L-methionine-dependent methyltransferases Glycosyl hydrolase domain 11
Starch-binding domain-like Glutathione synthetase ATP-binding domain-like 11
L domain-like Nucleotide cyclase 11
FKBP-like FKBP-like 11
N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 L30e-like 11
Alpha subunit of glutamate synthase, C-terminal domain alpha-helical ferredoxin 11
Glutathione synthetase ATP-binding domain-like ClpP/crotonase 11
Nucleotidyltransferase Poly A polymerase C-terminal region-like 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
Barwin-like endoglucanases FAS1 domain 11
ssDNA-binding transcriptional regulator domain ssDNA-binding transcriptional regulator domain 11
Adenine nucleotide alpha hydrolases-like Argininosuccinate synthetase, C-terminal domain 11
SufE/NifU BolA-like 11
Terpenoid cyclases/Protein prenyltransferases Terpenoid cyclases/Protein prenyltransferases 11
N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 Translational machinery components 11
P-loop containing nucleoside triphosphate hydrolases Homeodomain-like 11
RNA-binding domain, RBD Surp module (SWAP domain) 11
ARM repeat Hect, E3 ligase catalytic domain 11
SMAD/FHA domain FKBP-like 11
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 Nucleic acid-binding proteins 11
Nucleic acid-binding proteins S-adenosyl-L-methionine-dependent methyltransferases 11
DEK C-terminal domain ssDNA-binding transcriptional regulator domain 11
ACP-like Quinoprotein alcohol dehydrogenase-like 11
Clavaminate synthase-like P-loop containing nucleoside triphosphate hydrolases 11
SH3-domain SH3-domain 11
F-box domain Pectin lyase-like 11
P-loop containing nucleoside triphosphate hydrolases Lipase/lipooxygenase domain (PLAT/LH2 domain) 11
Activating enzymes of the ubiquitin-like proteins Activating enzymes of the ubiquitin-like proteins 11
SMAD/FHA domain PP2C-like 11
P-loop containing nucleoside triphosphate hydrolases Concanavalin A-like lectins/glucanases 11
Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 CCCH zinc finger 11
Protein prenylyltransferase TPR-like 11
UBA-like ARM repeat 11
NagB/RpiA/CoA transferase-like LmbE-like 11
UBC-like Protein kinase-like (PK-like) 11
alpha/beta-Hydrolases RNA-binding domain, RBD 11
Tudor/PWWP/MBT Chromo domain-like 11
ARID-like HMG-box 11
Carbamate kinase-like Carbamate kinase-like 11
TPR-like PUA domain-like 11
HIT/MYND zinc finger-like HSP20-like chaperones 11
RuvA domain 2-like SH2 domain 11
Cytochrome b5-like heme/steroid binding domain Nucleoporin domain 11
TPR-like RNA-binding domain, RBD 11
FAD/NAD(P)-binding domain 4Fe-4S ferredoxins 11
Nucleic acid-binding proteins SH2 domain 11
FMN-linked oxidoreductases alpha-helical ferredoxin 11
Mitochondrial carrier Barwin-like endoglucanases 11
EPT/RTPC-like RNA 3'-terminal phosphate cyclase, RPTC, insert domain 11
Probable ACP-binding domain of malonyl-CoA ACP transacylase (Trans)glycosidases 11
SAP domain Retrovirus zinc finger-like domains 11
TPR-like SGNH hydrolase 11
FAD/NAD(P)-binding domain HI0933 insert domain-like 11
Nudix Nudix 11
P-loop containing nucleoside triphosphate hydrolases Isocitrate/Isopropylmalate dehydrogenase-like 11
Glutamyl tRNA-reductase catalytic, N-terminal domain NAD(P)-binding Rossmann-fold domains 11
ARM repeat alpha/beta-Hydrolases 11
PP2C-like Hect, E3 ligase catalytic domain 11
TPR-like S-adenosyl-L-methionine-dependent methyltransferases 11
Chelatase Chlorophyll a-b binding protein 11
Retrovirus zinc finger-like domains Cysteine proteinases 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) alpha-helical ferredoxin 11
Clc chloride channel Clavaminate synthase-like 11
PIN domain-like Nucleic acid-binding proteins 11
P-loop containing nucleoside triphosphate hydrolases CRAL/TRIO N-terminal domain 11
GST C-terminal domain-like Nucleotidylyl transferase 11
Single hybrid motif ClpP/crotonase 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheY-like 11
HAD-like NHL repeat 11
Single hybrid motif Formin homology 2 domain (FH2 domain) 11
Arginase/deacetylase Arginase/deacetylase 11
Glutamine synthetase/guanido kinase GatB/YqeY motif 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase GroES-like 11
BRCT domain Lesion bypass DNA polymerase (Y-family), little finger domain 11
Acyl-CoA binding protein Kelch motif 11
FabD/lysophospholipase-like beta-beta-alpha zinc fingers 11
Galactose-binding domain-like Galactose mutarotase-like 11
Adenine nucleotide alpha hydrolases-like Thioredoxin-like 11
Clavaminate synthase-like Protein kinase-like (PK-like) 11
Ankyrin repeat Ankyrin repeat 11
(Trans)glycosidases vWA-like 11
Sec63 N-terminal domain-like DNA/RNA polymerases 11
FYVE/PHD zinc finger Mannose-binding lectins 11
Protein kinase-like (PK-like) NTF2-like 11
PreATP-grasp domain Methylglyoxal synthase-like 11
Glycoside hydrolase/deacetylase Galactose mutarotase-like 11
FYVE/PHD zinc finger Acyl-CoA N-acyltransferases (Nat) 11
Galactose mutarotase-like Galactose mutarotase-like 11
Zn-dependent exopeptidases Carboxypeptidase regulatory domain-like 11
Nucleotide-binding domain Nucleotide-binding domain 11
Cyclophilin-like Cyclophilin-like 11
Nucleic acid-binding proteins TPR-like 11
Nucleotidyltransferase TGS-like 11
P-loop containing nucleoside triphosphate hydrolases 4Fe-4S ferredoxins 11
L domain-like Clc chloride channel 11
S-adenosyl-L-methionine-dependent methyltransferases Putative methyltransferase TM0872, insert domain 11
Carbamoyl phosphate synthetase, small subunit N-terminal domain Class I glutamine amidotransferase-like 11
NSFL1 (p97 ATPase) cofactor p47, SEP domain Ubiquitin-like 11
DNA primase core P-loop containing nucleoside triphosphate hydrolases 11
Spermadhesin, CUB domain Spermadhesin, CUB domain 11
C2 domain (Calcium/lipid-binding domain, CaLB) Phospholipase D/nuclease 11
Ubiquitin-like ARM repeat 11
PH domain-like WW domain 11
Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases 11
F-box domain Galactose-binding domain-like 11
Formate/glycerate dehydrogenase catalytic domain-like Serine metabolism enzymes domain 11
Thiolase-like Cytochrome P450 11
RNI-like Ankyrin repeat 11
Bromodomain ARID-like 11
Chorismate lyase-like ACP-like 11
Nucleotidyltransferase ACT-like 11
Cysteine proteinases UBA-like 11
UBC-like Class II aaRS and biotin synthetases 11
SMAD/FHA domain Glucocorticoid receptor-like (DNA-binding domain) 11
PAH2 domain Rhomboid-like 11
POZ domain POZ domain 11
SAM/Pointed domain RING/U-box 11
Domain of the SRP/SRP receptor G-proteins Signal peptide-binding domain 11
PLP-dependent transferases Ornithine decarboxylase C-terminal domain 11
PreATP-grasp domain Aldolase 11
AraD/HMP-PK domain-like HAD-like 11
WW domain P-loop containing nucleoside triphosphate hydrolases 11
P-loop containing nucleoside triphosphate hydrolases PLP-dependent transferases 11
FAD-binding/transporter-associated domain-like alpha-helical ferredoxin 11
(Phosphotyrosine protein) phosphatases II E set domains 11
WD40 repeat-like SNARE fusion complex 11
Ribonuclease H-like SH2 domain 11
FGAM synthase PurL, linker domain PurM C-terminal domain-like 11
ATP-dependent DNA ligase DNA-binding domain BRCT domain 11
ValRS/IleRS/LeuRS editing domain tRNA-binding arm 11
Chaperone J-domain RNA-binding domain, RBD 11
RNI-like Ubiquitin-like 11
Sec63 N-terminal domain-like Ribonuclease H-like 11
Rhodanese/Cell cycle control phosphatase alpha/beta-Hydrolases 11
Rudiment single hybrid motif Aldolase 11
2Fe-2S ferredoxin-like 4Fe-4S ferredoxins 11
UDP-Glycosyltransferase/glycogen phosphorylase GHMP Kinase, C-terminal domain 11
Protein kinase-like (PK-like) Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 11
L domain-like ARM repeat 11
Metallo-dependent phosphatases Metallo-dependent phosphatases 11
Class I glutamine amidotransferase-like Ribulose-phoshate binding barrel 11
PH domain-like P-loop containing nucleoside triphosphate hydrolases 11
Protein kinase-like (PK-like) CheY-like 11
Ubiquitin-like L domain-like 11
WW domain WW domain 11
Chorismate lyase-like Acetyl-CoA synthetase-like 11
Cytidine deaminase-like Dihydrofolate reductase-like 11
Pseudo ankyrin repeat-like Pseudo ankyrin repeat-like 11
Actin-like ATPase domain CV3147-like 11
Chaperone J-domain SAP domain 11
F-box domain P-loop containing nucleoside triphosphate hydrolases 11
P-loop containing nucleoside triphosphate hydrolases CYTH-like phosphatases 11
"Winged helix" DNA-binding domain Protein kinase-like (PK-like) 11
Acyl-CoA binding protein Galactose oxidase, central domain 11
Ankyrin repeat Pseudo ankyrin repeat-like 11
RNA-binding domain, RBD ABC transporter transmembrane region 11
Galactose oxidase, central domain Kelch motif 11
NusB-like S-adenosyl-L-methionine-dependent methyltransferases 11
FAD/NAD(P)-binding domain SMAD/FHA domain 11
FGAM synthase PurL, linker domain PurM N-terminal domain-like 11
Tex N-terminal region-like Ribonuclease H-like 11
Nucleic acid-binding proteins NAD(P)-binding Rossmann-fold domains 11
TRAF domain-like Cysteine proteinases 11
mRNA decapping enzyme DcpS N-terminal domain HIT-like 11
Single hybrid motif Single hybrid motif 11
Ankyrin repeat Bromodomain 11
Class I glutamine amidotransferase-like GMP synthetase C-terminal dimerisation domain 11
FKBP-like Peptide methionine sulfoxide reductase 11
Thiamin pyrophosphokinase, catalytic domain Thiamin pyrophosphokinase, substrate-binding domain 11
Ribonuclease PH domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
Chaperone J-domain Homeodomain-like 11
GroES-like Cytochrome P450 11
EPT/RTPC-like EPT/RTPC-like 11
NagB/RpiA/CoA transferase-like NagB/RpiA/CoA transferase-like 11
Carbohydrate phosphatase Aldolase 11
PHL pollen allergen FAS1 domain 11
beta-sandwich domain of Sec23/24 Eukaryotic type KH-domain (KH-domain type I) 11
F-box domain Ankyrin repeat 11
PLP-dependent transferases (Trans)glycosidases 11
HLH, helix-loop-helix DNA-binding domain ACT-like 11
PreATP-grasp domain Cyclophilin-like 11
Thioesterase/thiol ester dehydrase-isomerase Eukaryotic type KH-domain (KH-domain type I) 11
tRNA-guanine transglycosylase Ran binding protein zinc finger-like 11
alpha/beta-Hydrolases Protein kinase-like (PK-like) 11
Eukaryotic type KH-domain (KH-domain type I) Chaperone J-domain 11
Class II aaRS and biotin synthetases GAD domain-like 11
PreATP-grasp domain Carbamoyl phosphate synthetase, large subunit connection domain 11
Voltage-gated potassium channels Ankyrin repeat 11
NAD(P)-binding Rossmann-fold domains Citrate synthase 11
Formin homology 2 domain (FH2 domain) GroES-like 11
Invasin/intimin cell-adhesion fragments RCC1/BLIP-II 11
FAD/NAD(P)-binding domain Thioredoxin-like 11
SAP domain Glutathione synthetase ATP-binding domain-like 11
R1 subunit of ribonucleotide reductase, N-terminal domain PFL-like glycyl radical enzymes 11
ARM repeat SH3-domain 11
alpha/beta-Hydrolases (Trans)glycosidases 11
GST C-terminal domain-like eEF1-gamma domain 11
AN1-like Zinc finger AN1-like Zinc finger 11
Thiolase-like C-terminal autoproteolytic domain of nucleoporin nup98 11
Metallo-dependent phosphatases P-loop containing nucleoside triphosphate hydrolases 11
Protein kinase-like (PK-like) CCCH zinc finger 11
Trypsin-like serine proteases Trypsin-like serine proteases 11
Protein kinase-like (PK-like) KA1-like 11
P-loop containing nucleoside triphosphate hydrolases PRTase-like 11
HLH, helix-loop-helix DNA-binding domain Protein kinase-like (PK-like) 11
Kelch motif Thioredoxin-like 11
Homeodomain-like "Winged helix" DNA-binding domain 11
NTF2-like NTF2-like 11
Protein kinase-like (PK-like) RING/U-box 11
Glutathione synthetase ATP-binding domain-like post-HMGL domain-like 11
Bromodomain Chaperone J-domain 11
E set domains AMPKBI-like 11
ACT-like Ubiquitin-like 11
F-box domain PP2C-like 11
MoeA N-terminal region -like Molybdenum cofactor biosynthesis proteins 11
Retrovirus zinc finger-like domains WW domain 11
ARM repeat FabD/lysophospholipase-like 11
SAP domain Caspase-like 11
HD-domain/PDEase-like TGS-like 11
Class I glutamine amidotransferase-like Adenine nucleotide alpha hydrolases-like 11
ClpP/crotonase NAD(P)-binding Rossmann-fold domains 11
"Winged helix" DNA-binding domain RNA-binding domain, RBD 11

Jump to [ Top of page · Add/remove domain pairs · Add/remove genomes · Domain combination pairs ]