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Domain combination pairs in Physcomitrella patens subsp. patens 22

All pairs of domain combinations at the superfamily level are listed here.
The identification of domain pairs does not account for the possibility of non-contiguous domains. Inserted, or interlaced, domains are seen as having a simple pair ordering.

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Domain combination pairs

1521 domain combination pairs.
Click on a column heading to sort that column, or the 'View' button to see domain architetures for that domain pair combination.

Superfamily (N) Superfamily (C) Number of occurrances Number unique
P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases 20354
L domain-like Protein kinase-like (PK-like) 18141
F-box domain Kelch motif 1064
Actin-like ATPase domain Actin-like ATPase domain 10019
RNA-binding domain, RBD RNA-binding domain, RBD 9323
L domain-like L domain-like 8848
NAD(P)-binding Rossmann-fold domains Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 819
TPR-like TPR-like 7727
ARM repeat ARM repeat 7336
Thioredoxin-like GST C-terminal domain-like 718
Homodimeric domain of signal transducing histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 6325
GroES-like NAD(P)-binding Rossmann-fold domains 627
P-loop containing nucleoside triphosphate hydrolases Translation proteins 6013
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheY-like 5822
Thiolase-like Thiolase-like 572
Homodimeric domain of signal transducing histidine kinase CheY-like 5418
Calcium ATPase, transduction domain A Calcium ATPase, transmembrane domain M 539
ABC transporter transmembrane region P-loop containing nucleoside triphosphate hydrolases 5210
Calcium ATPase, transmembrane domain M HAD-like 5210
Calcium ATPase, transduction domain A HAD-like 508
F-box domain RNI-like 4711
Protein kinase-like (PK-like) EF-hand 463
Homeodomain-like Homeodomain-like 4516
RNI-like L domain-like 4334
NAD(P)-binding Rossmann-fold domains 6-phosphogluconate dehydrogenase C-terminal domain-like 417
Barwin-like endoglucanases PHL pollen allergen 413
Translation proteins EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 394
ARM repeat RING/U-box 388
S-adenosyl-L-methionine-dependent methyltransferases S-adenosyl-L-methionine-dependent methyltransferases 385
(Trans)glycosidases Glycosyl hydrolase domain 379
P-loop containing nucleoside triphosphate hydrolases EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 373
Tubulin nucleotide-binding domain-like Tubulin C-terminal domain-like 375
Galactose oxidase, central domain E set domains 362
Cyclin-like Cyclin-like 346
Aminoacid dehydrogenase-like, N-terminal domain NAD(P)-binding Rossmann-fold domains 344
PK beta-barrel domain-like Phosphoenolpyruvate/pyruvate domain 333
Thioredoxin-like Thioredoxin-like 3311
Metal cation-transporting ATPase, ATP-binding domain N HAD-like 334
Metal cation-transporting ATPase, ATP-binding domain N Calcium ATPase, transmembrane domain M 334
GroEL-intermediate domain like GroEL apical domain-like 324
FAD/NAD(P)-binding domain FAD/NAD(P)-binding domain 329
Riboflavin synthase domain-like Ferredoxin reductase-like, C-terminal NADP-linked domain 328
GroEL equatorial domain-like GroEL-intermediate domain like 313
GroEL equatorial domain-like GroEL apical domain-like 313
RING/U-box RING/U-box 3113
Calcium ATPase, transduction domain A Metal cation-transporting ATPase, ATP-binding domain N 312
P-loop containing nucleoside triphosphate hydrolases L domain-like 3019
PK beta-barrel domain-like PK C-terminal domain-like 302
Phosphoenolpyruvate/pyruvate domain PK C-terminal domain-like 302
Multidrug resistance efflux transporter EmrE Multidrug resistance efflux transporter EmrE 295
ABC transporter transmembrane region ABC transporter transmembrane region 294
CRAL/TRIO N-terminal domain CRAL/TRIO domain 295
Protein kinase-like (PK-like) P-loop containing nucleoside triphosphate hydrolases 2810
Ubiquitin-like Ubiquitin-like 2812
FAD/NAD(P)-binding domain FAD-linked reductases, C-terminal domain 288
Thioesterase/thiol ester dehydrase-isomerase Thioesterase/thiol ester dehydrase-isomerase 277
PYP-like sensor domain (PAS domain) PYP-like sensor domain (PAS domain) 2610
RNI-like RNI-like 2614
P-loop containing nucleoside triphosphate hydrolases FtsH protease domain-like 253
Actin-like ATPase domain Heat shock protein 70kD (HSP70), peptide-binding domain 247
FAD/NAD(P)-binding domain FAD/NAD-linked reductases, dimerisation (C-terminal) domain 244
ARM repeat Protein kinase-like (PK-like) 2317
Chaperone J-domain HSP40/DnaJ peptide-binding domain 236
SNARE-like SNARE fusion complex 232
RING/U-box WD40 repeat-like 237
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 239
Galactose mutarotase-like (Trans)glycosidases 226
Heat shock protein 70kD (HSP70), peptide-binding domain Heat shock protein 70kD (HSP70), C-terminal subdomain 225
Cupredoxins Cupredoxins 227
EF-G C-terminal domain-like EF-G C-terminal domain-like 2210
Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) 226
RNI-like Protein kinase-like (PK-like) 2216
HSP40/DnaJ peptide-binding domain HSP40/DnaJ peptide-binding domain 225
Actin-like ATPase domain Heat shock protein 70kD (HSP70), C-terminal subdomain 215
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Ribosomal protein S5 domain 2-like 219
EF-hand EF-hand 216
beta-beta-alpha zinc fingers beta-beta-alpha zinc fingers 217
Formate/glycerate dehydrogenase catalytic domain-like NAD(P)-binding Rossmann-fold domains 207
ACT-like ACT-like 209
Translation proteins EF-G C-terminal domain-like 208
CCCH zinc finger CCCH zinc finger 2013
P-loop containing nucleoside triphosphate hydrolases EF-G C-terminal domain-like 208
Ypt/Rab-GAP domain of gyp1p Ypt/Rab-GAP domain of gyp1p 194
PreATP-grasp domain Glutathione synthetase ATP-binding domain-like 1910
Purple acid phosphatase, N-terminal domain Metallo-dependent phosphatases 183
Ubiquitin-like UBA-like 1810
Ribosomal protein S5 domain 2-like GHMP Kinase, C-terminal domain 185
Nucleic acid-binding proteins Nucleic acid-binding proteins 1812
P-loop containing nucleoside triphosphate hydrolases Ribosomal protein S5 domain 2-like 187
C2 domain (Calcium/lipid-binding domain, CaLB) C2 domain (Calcium/lipid-binding domain, CaLB) 187
(Trans)glycosidases Galactose-binding domain-like 189
LuxS/MPP-like metallohydrolase LuxS/MPP-like metallohydrolase 176
Phospholipase D/nuclease Phospholipase D/nuclease 179
NAD(P)-binding Rossmann-fold domains LDH C-terminal domain-like 172
GAF domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 175
MFS general substrate transporter MFS general substrate transporter 172
Ribosomal protein S5 domain 2-like EF-G C-terminal domain-like 178
RCC1/BLIP-II RCC1/BLIP-II 174
DNA-binding pseudobarrel domain DNA-binding pseudobarrel domain 167
PIN domain-like 5' to 3' exonuclease, C-terminal subdomain 165
WD40 repeat-like WD40 repeat-like 169
Retrovirus zinc finger-like domains Retrovirus zinc finger-like domains 166
Lipase/lipooxygenase domain (PLAT/LH2 domain) Lipoxigenase 163
Acyl-CoA dehydrogenase NM domain-like Acyl-CoA dehydrogenase C-terminal domain-like 164
Thiamin diphosphate-binding fold (THDP-binding) TK C-terminal domain-like 152
Trypsin-like serine proteases PDZ domain-like 154
ENTH/VHS domain GAT-like domain 154
Zn-finger domain of Sec23/24 vWA-like 155
ARM repeat Clathrin adaptor appendage domain 155
Plant invertase/pectin methylesterase inhibitor Pectin lyase-like 152
PYP-like sensor domain (PAS domain) CheY-like 158
RING/U-box Nucleotide-diphospho-sugar transferases 153
Retrovirus zinc finger-like domains RNA-binding domain, RBD 156
PYP-like sensor domain (PAS domain) ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 158
Zn-finger domain of Sec23/24 beta-sandwich domain of Sec23/24 155
Chaperone J-domain DnaJ/Hsp40 cysteine-rich domain 155
DnaJ/Hsp40 cysteine-rich domain HSP40/DnaJ peptide-binding domain 155
FYVE/PHD zinc finger FYVE/PHD zinc finger 158
vWA-like beta-sandwich domain of Sec23/24 155
Galactose mutarotase-like Glycosyl hydrolase domain 153
Glucocorticoid receptor-like (DNA-binding domain) Glucocorticoid receptor-like (DNA-binding domain) 154
CBS-domain pair CBS-domain pair 157
Composite domain of metallo-dependent hydrolases Metallo-dependent hydrolases 156
Voltage-gated potassium channels cAMP-binding domain-like 144
beta-sandwich domain of Sec23/24 Helical domain of Sec23/24 144
Nucleotide-diphospho-sugar transferases Trimeric LpxA-like enzymes 142
Zn-finger domain of Sec23/24 Helical domain of Sec23/24 144
Cation efflux protein transmembrane domain-like Cation efflux protein cytoplasmic domain-like 144
Translation proteins Ribosomal protein S5 domain 2-like 145
Nucleotidylyl transferase Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 1412
vWA-like Helical domain of Sec23/24 144
beta-sandwich domain of Sec23/24 C-terminal, gelsolin-like domain of Sec23/24 134
ARM repeat WD40 repeat-like 1311
Toll/Interleukin receptor TIR domain P-loop containing nucleoside triphosphate hydrolases 139
vWA-like C-terminal, gelsolin-like domain of Sec23/24 134
Glycerol-3-phosphate (1)-acyltransferase EF-hand 131
Bet v1-like Bet v1-like 133
Nucleic acid-binding proteins Class II aaRS and biotin synthetases 136
SNARE-like Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor 133
Glutamine synthetase, N-terminal domain Glutamine synthetase/guanido kinase 134
Ribonuclease H-like DNA/RNA polymerases 135
Arabinanase/levansucrase/invertase Concanavalin A-like lectins/glucanases 132
Zn-finger domain of Sec23/24 C-terminal, gelsolin-like domain of Sec23/24 134
dsRNA-binding domain-like dsRNA-binding domain-like 138
Double Clp-N motif P-loop containing nucleoside triphosphate hydrolases 125
Peptidase/esterase 'gauge' domain alpha/beta-Hydrolases 122
Phosphoglucomutase, first 3 domains Phosphoglucomutase, first 3 domains 124
Helical domain of Sec23/24 C-terminal, gelsolin-like domain of Sec23/24 123
Thiamin diphosphate-binding fold (THDP-binding) DHS-like NAD/FAD-binding domain 124
Nitrite/Sulfite reductase N-terminal domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 122
FYVE/PHD zinc finger SET domain 127
DNA-binding domain DNA-binding domain 125
dsRNA-binding domain-like Ribosomal protein S5 domain 2-like 121
Nitrite/Sulfite reductase N-terminal domain-like Nitrite/Sulfite reductase N-terminal domain-like 122
MurD-like peptide ligases, catalytic domain MurD-like peptide ligases, peptide-binding domain 126
vWA-like Protein kinase-like (PK-like) 123
P-loop containing nucleoside triphosphate hydrolases "Winged helix" DNA-binding domain 126
CheY-like CheY-like 128
ADC-like P-loop containing nucleoside triphosphate hydrolases 122
Class II aaRS and biotin synthetases Class II aaRS ABD-related 128
Ribosomal protein S5 domain 2-like HSP90 C-terminal domain 123
Cdc48 domain 2-like P-loop containing nucleoside triphosphate hydrolases 122
Nucleic acid-binding proteins P-loop containing nucleoside triphosphate hydrolases 124
PYP-like sensor domain (PAS domain) Protein kinase-like (PK-like) 124
GroES-like GroES-like 123
ADC-like Cdc48 domain 2-like 122
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase HSP90 C-terminal domain 123
DPP6 N-terminal domain-like alpha/beta-Hydrolases 122
DNA-binding pseudobarrel domain CAD & PB1 domains 122
Ribosomal L11/L12e N-terminal domain Ribosomal protein L11, C-terminal domain 122
Phosphoglucomutase, first 3 domains Phosphoglucomutase, C-terminal domain 124
CHY zinc finger-like RING/U-box 113
LEA14-like LEA14-like 112
SET domain RuBisCo LSMT C-terminal, substrate-binding domain 112
CHY zinc finger-like Zinc hairpin stack 113
Zinc hairpin stack RING/U-box 113
PLC-like phosphodiesterases C2 domain (Calcium/lipid-binding domain, CaLB) 115
BAR/IMD domain-like SH3-domain 113
E set domains (Trans)glycosidases 114
NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains 113
NAD(P)-binding Rossmann-fold domains ACT-like 115
Nucleotidyltransferase PAP/OAS1 substrate-binding domain 115
Clc chloride channel CBS-domain pair 113
Glutathione synthetase ATP-binding domain-like Rudiment single hybrid motif 115
ACT-like Protein kinase-like (PK-like) 112
Chromo domain-like P-loop containing nucleoside triphosphate hydrolases 116
Sigma2 domain of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 114
DNA repair protein MutS, domain III P-loop containing nucleoside triphosphate hydrolases 118
Ribosomal protein S5 domain 2-like Ribonuclease PH domain 2-like 105
BEACH domain WD40 repeat-like 107
P-loop containing nucleoside triphosphate hydrolases post-AAA+ oligomerization domain-like 105
PreATP-grasp domain Rudiment single hybrid motif 104
TPR-like RING/U-box 105
Single hybrid motif CoA-dependent acyltransferases 105
PH domain-like WD40 repeat-like 107
Nitrite and sulphite reductase 4Fe-4S domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 101
F1F0 ATP synthase subunit C F1F0 ATP synthase subunit C 101
PH domain-like BEACH domain 107
Cryptochrome/photolyase, N-terminal domain Cryptochrome/photolyase FAD-binding domain 104
Chromo domain-like Chromo domain-like 105
Ubiquitin-like Zn-binding ribosomal proteins 101
GAF domain-like Homodimeric domain of signal transducing histidine kinase 104
E set domains Glycosyl hydrolase domain 103
Translation proteins SH3-like domain Nucleic acid-binding proteins 103
Ankyrin repeat Protein kinase-like (PK-like) 102
Leukotriene A4 hydrolase N-terminal domain Metalloproteases ("zincins"), catalytic domain 103
PYP-like sensor domain (PAS domain) GAF domain-like 103
"Winged helix" DNA-binding domain "Winged helix" DNA-binding domain 106
(Trans)glycosidases Beta-D-glucan exohydrolase, C-terminal domain 103
FYVE/PHD zinc finger RING/U-box 106
GAF domain-like CheY-like 93
GAF domain-like GAF domain-like 92
Ankyrin repeat RING/U-box 92
Eukaryotic type KH-domain (KH-domain type I) Eukaryotic type KH-domain (KH-domain type I) 93
Periplasmic binding protein-like II GlnB-like 91
ARM repeat PH domain-like 96
SET domain TPR-like 94
Dimeric alpha+beta barrel Dimeric alpha+beta barrel 92
UDP-Glycosyltransferase/glycogen phosphorylase HAD-like 94
FAD-binding/transporter-associated domain-like FAD-linked oxidases, C-terminal domain 92
ARM repeat Subdomain of clathrin and coatomer appendage domain 93
F-box domain Galactose oxidase, central domain 92
C2 domain (Calcium/lipid-binding domain, CaLB) Phospholipase D/nuclease 92
Homeodomain-like Bet v1-like 93
HAD-like NTF2-like 92
Clathrin adaptor appendage domain Subdomain of clathrin and coatomer appendage domain 93
Ribosomal protein L7/12, oligomerisation (N-terminal) domain ClpS-like 91
ISP domain Bet v1-like 92
Chaperone J-domain 4Fe-4S ferredoxins 91
UROD/MetE-like UROD/MetE-like 91
Cullin homology domain "Winged helix" DNA-binding domain 93
P-loop containing nucleoside triphosphate hydrolases EF-hand 94
CCCH zinc finger RNA-binding domain, RBD 97
HD-domain/PDEase-like Nucleotidyltransferase 96
Cullin repeat-like "Winged helix" DNA-binding domain 82
Cysteine proteinases Granulin repeat 81
Transcription factor IIA (TFIIA), alpha-helical domain Transcription factor IIA (TFIIA), beta-barrel domain 82
Protein kinase-like (PK-like) Protein kinase-like (PK-like) 85
Kelch motif Kelch motif 86
Cullin repeat-like Cullin homology domain 82
Ankyrin repeat POZ domain 85
PAZ domain Ribonuclease H-like 83
Amidase signature (AS) enzymes TPR-like 81
UBA-like UBA-like 84
Voltage-gated potassium channels Voltage-gated potassium channels 83
HMA, heavy metal-associated domain Calcium ATPase, transmembrane domain M 84
Toll/Interleukin receptor TIR domain L domain-like 87
Glucocorticoid receptor-like (DNA-binding domain) AN1-like Zinc finger 81
Enolase N-terminal domain-like Enolase C-terminal domain-like 83
Protein kinase-like (PK-like) TPR-like 82
PYP-like sensor domain (PAS domain) Homodimeric domain of signal transducing histidine kinase 87
Translation initiation factor 2 beta, aIF2beta, N-terminal domain Zinc-binding domain of translation initiation factor 2 beta 83
cAMP-binding domain-like Thioesterase/thiol ester dehydrase-isomerase 83
P-loop containing nucleoside triphosphate hydrolases RING/U-box 84
P-loop containing nucleoside triphosphate hydrolases RNI-like 87
PH domain-like Oxysterol-binding protein-like 82
"Winged helix" DNA-binding domain E2F-DP heterodimerization region 83
Serine metabolism enzymes domain ACT-like 83
Amine oxidase N-terminal region Amine oxidase catalytic domain 82
HMA, heavy metal-associated domain Calcium ATPase, transduction domain A 84
Ribosomal protein L6 Ribosomal protein L6 82
NAD(P)-binding Rossmann-fold domains Serine metabolism enzymes domain 83
HMA, heavy metal-associated domain HAD-like 84
FYVE/PHD zinc finger Acyl-CoA N-acyltransferases (Nat) 84
PH domain-like FYVE/PHD zinc finger 85
Tudor/PWWP/MBT FYVE/PHD zinc finger 86
HAD-like Glycerol-3-phosphate (1)-acyltransferase 81
Translational machinery components L30e-like 82
PH domain-like P-loop containing nucleoside triphosphate hydrolases 72
Single hybrid motif Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 73
Sec7 domain ARM repeat 74
CheY-like Homeodomain-like 73
Flavoproteins Ferredoxin reductase-like, C-terminal NADP-linked domain 73
Voltage-gated potassium channels EF-hand 72
BRCT domain BRCT domain 77
Concanavalin A-like lectins/glucanases P-domain of calnexin/calreticulin 71
PH domain-like Bet v1-like 73
Rhodanese/Cell cycle control phosphatase Rhodanese/Cell cycle control phosphatase 73
Class II aaRS and biotin synthetases ThrRS/AlaRS common domain 76
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 71
Oxidoreductase molybdopterin-binding domain E set domains 73
Concanavalin A-like lectins/glucanases BEACH domain 75
LysM domain LysM domain 76
N-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase 72
Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 71
WD40 repeat-like Quinoprotein alcohol dehydrogenase-like 74
Concanavalin A-like lectins/glucanases WD40 repeat-like 75
FYVE/PHD zinc finger P-loop containing nucleoside triphosphate hydrolases 77
Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 71
Formate/glycerate dehydrogenase catalytic domain-like Serine metabolism enzymes domain 72
Galactose-binding domain-like Galactose-binding domain-like 73
Mechanosensitive channel protein MscS (YggB), transmembrane region Sm-like ribonucleoproteins 71
ARM repeat P-loop containing nucleoside triphosphate hydrolases 74
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 71
N-terminal domain of alpha and beta subunits of F1 ATP synthase P-loop containing nucleoside triphosphate hydrolases 72
HLH, helix-loop-helix DNA-binding domain ACT-like 72
P-loop containing nucleoside triphosphate hydrolases C-terminal domain of alpha and beta subunits of F1 ATP synthase 72
Formate/glycerate dehydrogenase catalytic domain-like ACT-like 72
Amine oxidase N-terminal region Amine oxidase N-terminal region 71
Glutathione synthetase ATP-binding domain-like S-adenosyl-L-methionine-dependent methyltransferases 71
PAH2 domain PAH2 domain 74
P-loop containing nucleoside triphosphate hydrolases dsRNA-binding domain-like 77
L domain-like C-type lectin-like 72
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex CoA-dependent acyltransferases 73
Thioredoxin-like FAD-dependent thiol oxidase 73
Concanavalin A-like lectins/glucanases PH domain-like 75
Flavoproteins Riboflavin synthase domain-like 73
P-loop containing nucleoside triphosphate hydrolases PRTase-like 72
RNA-binding domain, RBD Ran binding protein zinc finger-like 63
t-snare proteins SNARE fusion complex 62
NAD(P)-binding Rossmann-fold domains Citrate synthase 61
Carbamate kinase-like ACT-like 64
cAMP-binding domain-like cAMP-binding domain-like 64
Kelch motif Metallo-dependent phosphatases 64
Ran binding protein zinc finger-like Ran binding protein zinc finger-like 65
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 62
Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 63
POZ domain Pentapeptide repeat-like 65
WD40 repeat-like NHL repeat 62
FMN-linked oxidoreductases Alpha subunit of glutamate synthase, C-terminal domain 63
PA domain RING/U-box 61
Plant lectins/antimicrobial peptides Lysozyme-like 62
Saposin Saposin 62
YhbY-like YhbY-like 64
Tudor/PWWP/MBT SET domain 64
Glutathione synthetase ATP-binding domain-like Succinyl-CoA synthetase domains 61
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 61
NAD kinase/diacylglycerol kinase-like NAD kinase/diacylglycerol kinase-like 61
N-terminal nucleophile aminohydrolases (Ntn hydrolases) FMN-linked oxidoreductases 63
6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 62
Creatinase/aminopeptidase "Winged helix" DNA-binding domain 62
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 62
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Alpha subunit of glutamate synthase, C-terminal domain 63
NAD(P)-binding Rossmann-fold domains 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 61
NagB/RpiA/CoA transferase-like D-ribose-5-phosphate isomerase (RpiA), lid domain 62
N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 Translational machinery components 61
PUA domain-like PUA domain-like 61
Protein kinase-like (PK-like) WD40 repeat-like 64
N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 L30e-like 61
L9 N-domain-like Ribosomal protein L9 C-domain 61
Thioredoxin-like Ubiquitin-like 63
Fumarylacetoacetate hydrolase, FAH, N-terminal domain FAH 61
alpha-D-mannose-specific plant lectins Protein kinase-like (PK-like) 65
Nucleic acid-binding proteins Retrovirus zinc finger-like domains 64
Cytidine deaminase-like Dihydrofolate reductase-like 62
RING/U-box TRAF domain-like 63
ValRS/IleRS/LeuRS editing domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 66
ValRS/IleRS/LeuRS editing domain Nucleotidylyl transferase 66
lambda repressor-like DNA-binding domains Cyanase C-terminal domain 61
Prokaryotic type KH domain (KH-domain type II) Ribosomal protein S3 C-terminal domain 61
Thiamin pyrophosphokinase, catalytic domain Thiamin pyrophosphokinase, substrate-binding domain 62
Tetrahydrobiopterin biosynthesis enzymes-like Tetrahydrobiopterin biosynthesis enzymes-like 52
P-loop containing nucleoside triphosphate hydrolases Retrovirus zinc finger-like domains 52
P-loop containing nucleoside triphosphate hydrolases Hypothetical protein YjiA, C-terminal domain 53
HAMP domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 54
MurE/MurF N-terminal domain MurD-like peptide ligases, catalytic domain 53
ClpP/crotonase ClpP/crotonase 53
Ribonuclease H-like Eukaryotic type KH-domain (KH-domain type I) 51
RNA-binding domain, RBD PABC (PABP) domain 51
(Phosphotyrosine protein) phosphatases II (Phosphotyrosine protein) phosphatases II 53
DNA repair protein MutS, domain I P-loop containing nucleoside triphosphate hydrolases 55
UBA-like RING/U-box 55
POZ domain Quinoprotein alcohol dehydrogenase-like 51
FKBP-like Triger factor/SurA peptide-binding domain-like 52
GST C-terminal domain-like Nucleotidylyl transferase 52
Thioredoxin-like TPR-like 53
GINS helical bundle-like PriA/YqbF domain 52
Eukaryotic type KH-domain (KH-domain type I) Retrovirus zinc finger-like domains 53
Ankyrin repeat Ankyrin repeat 52
Activating enzymes of the ubiquitin-like proteins Activating enzymes of the ubiquitin-like proteins 52
UBA-like Elongation factor Ts (EF-Ts), dimerisation domain 52
NAD(P)-binding Rossmann-fold domains Aldolase 52
RNase III domain-like dsRNA-binding domain-like 55
cAMP-binding domain-like Ankyrin repeat 51
2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain Alkaline phosphatase-like 51
FYVE/PHD zinc finger Homeodomain-like 54
ARM repeat FYVE/PHD zinc finger 54
PreATP-grasp domain PreATP-grasp domain 53
Acyl-CoA dehydrogenase C-terminal domain-like Acyl-CoA dehydrogenase C-terminal domain-like 52
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Adenine nucleotide alpha hydrolases-like 52
ARM repeat BEACH domain 54
Calponin-homology domain, CH-domain P-loop containing nucleoside triphosphate hydrolases 53
P-loop containing nucleoside triphosphate hydrolases NTF2-like 51
P-loop containing nucleoside triphosphate hydrolases Sec63 N-terminal domain-like 54
RNase III domain-like RNase III domain-like 55
Zn-dependent exopeptidases Bacterial exopeptidase dimerisation domain 53
RING/U-box Cysteine proteinases 54
DNA ligase/mRNA capping enzyme, catalytic domain Nucleic acid-binding proteins 54
P-loop containing nucleoside triphosphate hydrolases E set domains 53
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 53
Insert subdomain of RNA polymerase alpha subunit RBP11-like subunits of RNA polymerase 54
PEP carboxykinase N-terminal domain PEP carboxykinase-like 52
Domain of the SRP/SRP receptor G-proteins P-loop containing nucleoside triphosphate hydrolases 54
Nucleotidylyl transferase Ribosomal protein L25-like 52
6-phosphogluconate dehydrogenase C-terminal domain-like UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 52
Protein kinase-like (PK-like) "Winged helix" DNA-binding domain 52
Eukaryotic type KH-domain (KH-domain type I) Nucleic acid-binding proteins 53
RNA-binding domain, RBD WW domain 55
EF-hand Mitochondrial carrier 52
Cystatin/monellin Cystatin/monellin 51
TPR-like HCP-like 55
XPC-binding domain UBA-like 52
Cupredoxins Protein kinase-like (PK-like) 52
RING/U-box PUA domain-like 52
Aminopeptidase/glucanase lid domain Zn-dependent exopeptidases 51
WW domain WW domain 55
Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like 54
GST C-terminal domain-like eEF1-gamma domain 53
Glycoside hydrolase/deacetylase Families 57/38 glycoside transferase middle domain 54
HIT/MYND zinc finger-like Cysteine proteinases 53
SNARE fusion complex SNARE fusion complex 51
PDZ domain-like ClpP/crotonase 52
ARM repeat TPR-like 53
Oxygen-evolving enhancer protein 3, Cyclophilin-like 51
Homeodomain-like RING/U-box 52
P-loop containing nucleoside triphosphate hydrolases Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain 52
Class I glutamine amidotransferase-like Class I glutamine amidotransferase-like 52
CBS-domain pair CAD & PB1 domains 52
"Winged helix" DNA-binding domain RNA-binding domain, RBD 52
FKBP-like TPR-like 53
Homeodomain-like "Winged helix" DNA-binding domain 52
S-adenosylmethionine synthetase S-adenosylmethionine synthetase 52
MurE/MurF N-terminal domain MurD-like peptide ligases, peptide-binding domain 53
LysM domain Duplicated hybrid motif 54
Voltage-gated potassium channels Ankyrin repeat 51
P-loop containing nucleoside triphosphate hydrolases Homeodomain-like 54
ARM repeat Concanavalin A-like lectins/glucanases 54
alpha/beta-Hydrolases alpha/beta-Hydrolases 53
Protein kinase-like (PK-like) Mannose-binding lectins 51
Terpenoid cyclases/Protein prenyltransferases Terpenoid synthases 53
(Phosphotyrosine protein) phosphatases II Actin depolymerizing proteins 43
Oxidoreductase molybdopterin-binding domain Riboflavin synthase domain-like 41
Cytochrome b5-like heme/steroid binding domain Ferredoxin reductase-like, C-terminal NADP-linked domain 41
Protein kinase-like (PK-like) alpha/beta-Hydrolases 42
NAD(P)-binding Rossmann-fold domains Succinyl-CoA synthetase domains 41
POZ domain TRAF domain-like 42
DNA repair protein MutS, domain I DNA repair protein MutS, domain III 44
2Fe-2S ferredoxin-like CO dehydrogenase molybdoprotein N-domain-like 41
PUA domain-like SET domain 42
beta-Galactosidase/glucuronidase domain (Trans)glycosidases 44
Thioredoxin-like eEF1-gamma domain 42
CO dehydrogenase flavoprotein C-terminal domain-like CO dehydrogenase molybdoprotein N-domain-like 41
WD40 repeat-like FYVE/PHD zinc finger 43
N-terminal, heterodimerisation domain of RBP7 (RpoE) Nucleic acid-binding proteins 41
Rhomboid-like UBA-like 41
HMG-box HMG-box 42
PurM N-terminal domain-like PurM C-terminal domain-like 43
Trigger factor ribosome-binding domain FKBP-like 41
Chaperone J-domain Homeodomain-like 41
FKBP-like FKBP-like 42
EF-hand TPR-like 44
P-loop containing nucleoside triphosphate hydrolases Bromodomain 42
SufE/NifU BolA-like 41
WRKY DNA-binding domain WRKY DNA-binding domain 41
HAD-like BRCT domain 41
Oxidoreductase molybdopterin-binding domain Ferredoxin reductase-like, C-terminal NADP-linked domain 41
FF domain FF domain 44
N-terminal nucleophile aminohydrolases (Ntn hydrolases) FAD/NAD(P)-binding domain 42
Second domain of FERM PH domain-like 42
E set domains Cytochrome b5-like heme/steroid binding domain 41
Cytidine deaminase-like Cytidine deaminase-like 41
Creatinase/prolidase N-terminal domain Creatinase/aminopeptidase 44
N-terminal domain of MutM-like DNA repair proteins S13-like H2TH domain 42
F-box domain WD40 repeat-like 42
Folate-binding domain Aminomethyltransferase beta-barrel domain 42
Alpha subunit of glutamate synthase, C-terminal domain alpha-helical ferredoxin 42
2Fe-2S ferredoxin-like CO dehydrogenase flavoprotein C-terminal domain-like 41
EF-hand Ferredoxin reductase-like, C-terminal NADP-linked domain 41
Acyl-CoA N-acyltransferases (Nat) Chromo domain-like 42
CO dehydrogenase ISP C-domain like CO dehydrogenase flavoprotein C-terminal domain-like 41
CO dehydrogenase ISP C-domain like CO dehydrogenase molybdoprotein N-domain-like 41
Coiled-coil domain of nucleotide exchange factor GrpE Head domain of nucleotide exchange factor GrpE 41
2Fe-2S ferredoxin-like CO dehydrogenase ISP C-domain like 41
PLC-like phosphodiesterases PLC-like phosphodiesterases 42
Cysteine-rich domain Cysteine-rich domain 43
Nucleotide-diphospho-sugar transferases Nucleotide-diphospho-sugar transferases 42
E set domains Riboflavin synthase domain-like 41
CO dehydrogenase ISP C-domain like FAD-binding/transporter-associated domain-like 41
Heat shock protein 70kD (HSP70), C-terminal subdomain Heat shock protein 70kD (HSP70), C-terminal subdomain 43
Protein kinase-like (PK-like) KA1-like 42
Cytochrome c Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor 41
EF-hand Riboflavin synthase domain-like 41
Periplasmic binding protein-like II ACT-like 42
RNA-binding domain, RBD DPP6 N-terminal domain-like 41
Nqo1 middle domain-like Nqo1C-terminal domain-like 41
Metallo-dependent hydrolases Glutamine synthetase, N-terminal domain 42
vWA-like RING/U-box 41
ArfGap/RecO-like zinc finger C2 domain (Calcium/lipid-binding domain, CaLB) 41
Fe,Mn superoxide dismutase (SOD), N-terminal domain Fe,Mn superoxide dismutase (SOD), C-terminal domain 42
Starch-binding domain-like Phosphoglycerate mutase-like 41
CBS-domain pair FAD-binding/transporter-associated domain-like 41
ISP transmembrane anchor ISP domain 41
DAK1/DegV-like DhaL-like 41
FAD-binding/transporter-associated domain-like CO dehydrogenase flavoprotein C-terminal domain-like 41
FMN-linked oxidoreductases alpha-helical ferredoxin 42
DNA repair protein MutS, domain II DNA repair protein MutS, domain III 44
Adenine nucleotide alpha hydrolases-like Argininosuccinate synthetase, C-terminal domain 42
C-type lectin-like Protein kinase-like (PK-like) 41
CoA-dependent acyltransferases CoA-dependent acyltransferases 41
GST C-terminal domain-like Ribosomal protein L25-like 41
PreATP-grasp domain Single hybrid motif 42
Ubiquitin-like XPC-binding domain 41
P-loop containing nucleoside triphosphate hydrolases Phosphoglycerate mutase-like 41
FMN-linked oxidoreductases FAD/NAD(P)-binding domain 42
"Winged helix" DNA-binding domain S-adenosyl-L-methionine-dependent methyltransferases 42
FYVE/PHD zinc finger Bromodomain 42
Dihydrofolate reductase-like YbiA-like 42
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Type II DNA topoisomerase 42
Heme oxygenase-like CBS-domain pair 41
Starch-binding domain-like P-loop containing nucleoside triphosphate hydrolases 41
Alpha subunit of glutamate synthase, C-terminal domain FAD/NAD(P)-binding domain 42
Cyclophilin-like TPR-like 41
2Fe-2S ferredoxin-like Molybdenum cofactor-binding domain 41
Nqo1 FMN-binding domain-like Nqo1C-terminal domain-like 41
HCP-like SMR domain-like 42
Galactose-binding domain-like beta-Galactosidase/glucuronidase domain 44
Nucleic acid-binding proteins S-adenosyl-L-methionine-dependent methyltransferases 44
E set domains Ferredoxin reductase-like, C-terminal NADP-linked domain 41
Metallo-dependent hydrolases Glutamine synthetase/guanido kinase 42
Concanavalin A-like lectins/glucanases Protein kinase-like (PK-like) 43
RNA-binding domain, RBD dsRNA-binding domain-like 41
HCP-like HCP-like 44
BEACH domain FYVE/PHD zinc finger 43
Trigger factor ribosome-binding domain Triger factor/SurA peptide-binding domain-like 41
Families 57/38 glycoside transferase middle domain Galactose mutarotase-like 43
PLP-binding barrel Alanine racemase C-terminal domain-like 42
CO dehydrogenase flavoprotein C-terminal domain-like Molybdenum cofactor-binding domain 41
Rudiment single hybrid motif Single hybrid motif 42
Acid proteases Saposin 41
NAD(P)-binding Rossmann-fold domains Galactose-binding domain-like 42
Ribosomal protein S5 domain 2-like Type II DNA topoisomerase 42
Acyl-CoA binding protein Ankyrin repeat 41
Regulatory protein AraC Homeodomain-like 44
Translation initiation factor IF3, N-terminal domain Translation initiation factor IF3, C-terminal domain 42
Ribosomal L27 protein-like Nucleic acid-binding proteins 42
Concanavalin A-like lectins/glucanases FYVE/PHD zinc finger 43
Trypsin-like serine proteases Trypsin-like serine proteases 42
Heme oxygenase-like FAD-binding/transporter-associated domain-like 41
HMA, heavy metal-associated domain Cu,Zn superoxide dismutase-like 42
ARID-like FYVE/PHD zinc finger 42
Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain 42
Aconitase iron-sulfur domain LeuD/IlvD-like 42
Glycoside hydrolase/deacetylase Galactose mutarotase-like 43
Terpenoid cyclases/Protein prenyltransferases Terpenoid cyclases/Protein prenyltransferases 44
P-loop containing nucleoside triphosphate hydrolases TGS-like 43
alpha-helical ferredoxin FAD/NAD(P)-binding domain 42
N-terminal nucleophile aminohydrolases (Ntn hydrolases) alpha-helical ferredoxin 42
Carbamoyl phosphate synthetase, small subunit N-terminal domain Class I glutamine amidotransferase-like 41
Clathrin heavy-chain terminal domain ARM repeat 43
FAD-binding/transporter-associated domain-like CO dehydrogenase molybdoprotein N-domain-like 41
Oxidoreductase molybdopterin-binding domain Cytochrome b5-like heme/steroid binding domain 41
Class II aaRS and biotin synthetases GAD domain-like 42
CO dehydrogenase ISP C-domain like Molybdenum cofactor-binding domain 41
CO dehydrogenase molybdoprotein N-domain-like Molybdenum cofactor-binding domain 41
Nqo1 FMN-binding domain-like Nqo1 middle domain-like 41
Cytochrome b5-like heme/steroid binding domain Riboflavin synthase domain-like 41
ThrRS/AlaRS common domain Class II aaRS ABD-related 43
2Fe-2S ferredoxin-like FAD-binding/transporter-associated domain-like 41
DNA repair protein MutS, domain II P-loop containing nucleoside triphosphate hydrolases 44
Cysteine proteinases UBA-like 42
FAD-binding/transporter-associated domain-like Molybdenum cofactor-binding domain 41
Glutathione synthetase ATP-binding domain-like Single hybrid motif 42
Ubiquitin-like RING/U-box 43
P-loop containing nucleoside triphosphate hydrolases Smc hinge domain 42
Calponin-homology domain, CH-domain EB1 dimerisation domain-like 41
Actin-like ATPase domain HD-domain/PDEase-like 42
P-loop containing nucleoside triphosphate hydrolases D-aminoacid aminotransferase-like PLP-dependent enzymes 41
NAD(P)-binding Rossmann-fold domains UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 41
DNA/RNA polymerases Lesion bypass DNA polymerase (Y-family), little finger domain 42
POZ domain TAZ domain 41
CCCH zinc finger Eukaryotic type KH-domain (KH-domain type I) 32
Ubiquitin-like Hect, E3 ligase catalytic domain 31
P-loop containing nucleoside triphosphate hydrolases Ankyrin repeat 32
Cytidine deaminase-like YbiA-like 31
CorA soluble domain-like Magnesium transport protein CorA, transmembrane region 31
beta-Galactosidase/glucuronidase domain beta-Galactosidase/glucuronidase domain 33
P-loop containing nucleoside triphosphate hydrolases RNase III domain-like 33
FYVE/PHD zinc finger PUA domain-like 31
P-loop containing nucleoside triphosphate hydrolases Class I glutamine amidotransferase-like 33
WGR domain-like ADP-ribosylation 33
Dcp2 domain-like Nudix 31
Ribonuclease PH domain 2-like Nucleic acid-binding proteins 33
Subtilisin-like PA domain 32
Obg GTP-binding protein N-terminal domain P-loop containing nucleoside triphosphate hydrolases 33
PP2C-like Protein kinase-like (PK-like) 32
TPR-like Metallo-dependent phosphatases 31
ClpP/crotonase 6-phosphogluconate dehydrogenase C-terminal domain-like 31
PH domain-like ArfGap/RecO-like zinc finger 33
UBC-like UBA-like 31
Tropomyosin Tropomyosin 33
TATA-box binding protein-like TATA-box binding protein-like 32
tRNA-binding arm Class II aaRS and biotin synthetases 32
Bactericidal permeability-increasing protein, BPI Bactericidal permeability-increasing protein, BPI 31
SAP domain FYVE/PHD zinc finger 32
vWA-like SPOC domain-like 33
Translation proteins Initiation factor IF2/eIF5b, domain 3 32
Ribonuclease PH domain 2-like Ribonuclease PH domain 2-like 33
Tricorn protease domain 2 WD40 repeat-like 32
RING/U-box B-box zinc-binding domain 32
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Periplasmic binding protein-like II 33
6-phosphogluconate dehydrogenase C-terminal domain-like YgbK-like 31
DNA repair protein MutS, domain I DNA repair protein MutS, domain II 33
Carbamate kinase-like Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 32
beta and beta-prime subunits of DNA dependent RNA-polymerase Uracil-DNA glycosylase-like 31
PRTase-like PRTase-like 31
Eukaryotic type KH-domain (KH-domain type I) LigT-like 32
alpha/beta-Hydrolases Glycerol-3-phosphate (1)-acyltransferase 31
P-loop containing nucleoside triphosphate hydrolases RecA protein, C-terminal domain 31
Putative DNA-binding domain PheT/TilS domain 31
Ribosomal L27 protein-like Eukaryotic type KH-domain (KH-domain type I) 31
Thioredoxin-like ERP29 C domain-like 31
PAZ domain dsRNA-binding domain-like 33
SBT domain Ankyrin repeat 31
P-loop containing nucleoside triphosphate hydrolases Pre-protein crosslinking domain of SecA 33
Activator of Hsp90 ATPase, Aha1 Bet v1-like 31
POZ domain POZ domain 33
HMA, heavy metal-associated domain HMA, heavy metal-associated domain 32
F-box domain Clavaminate synthase-like 33
GroEL apical domain-like SAICAR synthase-like 32
Fe-S cluster assembly (FSCA) domain-like Fe-S cluster assembly (FSCA) domain-like 31
DNA clamp DNA clamp 31
NTF2-like RNA-binding domain, RBD 31
Glutamyl tRNA-reductase catalytic, N-terminal domain Glutamyl tRNA-reductase dimerization domain 32
Second domain of FERM Prismane protein-like 31
RNA-binding domain, RBD S-adenosyl-L-methionine-dependent methyltransferases 32
PAZ domain RNase III domain-like 33
Tudor/PWWP/MBT P-loop containing nucleoside triphosphate hydrolases 33
beta-beta-alpha zinc fingers DNA-binding domain 31
RCC1/BLIP-II FYVE/PHD zinc finger 31
POZ domain Skp1 dimerisation domain-like 31
PH domain-like Ankyrin repeat 33
Translation initiation factor 2 beta, aIF2beta, N-terminal domain ARM repeat 31
Protein kinase-like (PK-like) NTF2-like 31
C2 domain (Calcium/lipid-binding domain, CaLB) Formin homology 2 domain (FH2 domain) 31
Ubiquitin-like BAG domain 32
AraD/HMP-PK domain-like HAD-like 31
cAMP-binding domain-like Protein kinase-like (PK-like) 32
alpha-ketoacid dehydrogenase kinase, N-terminal domain ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 31
Sec63 N-terminal domain-like E set domains 32
P-loop containing nucleoside triphosphate hydrolases PAZ domain 33
Arabinanase/levansucrase/invertase Arabinanase/levansucrase/invertase 31
Calcyclin-binding protein-like HSP20-like chaperones 31
Zinc-binding domain of translation initiation factor 2 beta ARM repeat 31
BAR/IMD domain-like Ankyrin repeat 33
Starch-binding domain-like Glutathione synthetase ATP-binding domain-like 32
Ankyrin repeat TPR-like 31
Zinc beta-ribbon Cyclin-like 31
Homeodomain-like FAD/NAD(P)-binding domain 32
SAM/Pointed domain Fibronectin type III 33
Translation proteins ThrRS/AlaRS common domain 33
Eukaryotic RPB5 N-terminal domain RPB5-like RNA polymerase subunit 32
Actin-like ATPase domain Protein kinase-like (PK-like) 32
BAR/IMD domain-like ArfGap/RecO-like zinc finger 33
P-loop containing nucleoside triphosphate hydrolases Signal peptide-binding domain 33
Nucleic acid-binding proteins GAD domain-like 31
Macro domain-like Zn-dependent exopeptidases 31
B-box zinc-binding domain TRAF domain-like 32
Restriction endonuclease-like RuvA domain 2-like 32
Arabinanase/levansucrase/invertase Nucleotide-diphospho-sugar transferases 32
Glutamyl tRNA-reductase catalytic, N-terminal domain NAD(P)-binding Rossmann-fold domains 32
PheT/TilS domain Class II aaRS and biotin synthetases 31
ClpP/crotonase NAD(P)-binding Rossmann-fold domains 31
(Phosphotyrosine protein) phosphatases II C2 domain (Calcium/lipid-binding domain, CaLB) 31
PH domain-like Prismane protein-like 31
ARM repeat UBA-like 33
Chelatase Chlorophyll a-b binding protein 31
Adenine nucleotide alpha hydrolases-like DHS-like NAD/FAD-binding domain 31
Adenine nucleotide alpha hydrolases-like Adenine nucleotide alpha hydrolases-like 31
WD40 repeat-like C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase 31
PA domain Zn-dependent exopeptidases 32
(Phosphotyrosine protein) phosphatases II E set domains 32
Glutathione synthetase ATP-binding domain-like Glutathione synthetase ATP-binding domain-like 32
PRP4-like WD40 repeat-like 31
ATP-dependent DNA ligase DNA-binding domain DNA ligase/mRNA capping enzyme, catalytic domain 32
TRAF domain-like Cysteine proteinases 31
Galactose mutarotase-like Galactose-binding domain-like 33
FAD/NAD(P)-binding domain EF-hand 31
ACT-like Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 32
Clavaminate synthase-like Clavaminate synthase-like 31
ARM repeat Hect, E3 ligase catalytic domain 33
Rad51 N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 31
Quinoprotein alcohol dehydrogenase-like Protein kinase-like (PK-like) 33
F-box domain ARM repeat 32
Formate/glycerate dehydrogenase catalytic domain-like Formate/glycerate dehydrogenase catalytic domain-like 31
ARM repeat C2 domain (Calcium/lipid-binding domain, CaLB) 33
AN1-like Zinc finger AN1-like Zinc finger 32
ArfGap/RecO-like zinc finger Ankyrin repeat 33
PDZ domain-like PDZ domain-like 31
ARM repeat POZ domain 32
Putative DNA-binding domain Class II aaRS and biotin synthetases 31
Ubiquitin-like Cap-Gly domain 32
P-loop containing nucleoside triphosphate hydrolases Initiation factor IF2/eIF5b, domain 3 32
YVTN repeat-like/Quinoprotein amine dehydrogenase WD40 repeat-like 33
ARM repeat Tudor/PWWP/MBT 32
P-loop containing nucleoside triphosphate hydrolases Prismane protein-like 31
Actin depolymerizing proteins VHP, Villin headpiece domain 31
(Phosphotyrosine protein) phosphatases II Formin homology 2 domain (FH2 domain) 31
Ubiquitin-like Cysteine proteinases 32
Pseudouridine synthase Pseudouridine synthase 32
BAR/IMD domain-like PH domain-like 33
WGR domain-like Domain of poly(ADP-ribose) polymerase 33
4Fe-4S ferredoxins Formate dehydrogenase/DMSO reductase, domains 1-3 32
E set domains Ankyrin repeat 32
alpha-D-mannose-specific plant lectins alpha-D-mannose-specific plant lectins 33
"Winged helix" DNA-binding domain Sec63 N-terminal domain-like 32
RING/U-box CCCH zinc finger 33
Second domain of FERM P-loop containing nucleoside triphosphate hydrolases 31
HAD-like Riboflavin kinase-like 31
YgbK-like Aldolase 31
P-loop containing nucleoside triphosphate hydrolases HRDC-like 33
Heat shock protein 70kD (HSP70), peptide-binding domain Protein kinase-like (PK-like) 32
WW domain P-loop containing nucleoside triphosphate hydrolases 32
Actin depolymerizing proteins Actin depolymerizing proteins 31
NAD(P)-binding Rossmann-fold domains Glutamyl tRNA-reductase dimerization domain 32
SAP domain RNA-binding domain, RBD 31
NAD-binding domain of HMG-CoA reductase Substrate-binding domain of HMG-CoA reductase 31
F-box domain Tubby C-terminal domain-like 31
NAD(P)-binding Rossmann-fold domains YgbK-like 31
Ribosomal protein S5 domain 2-like Nucleic acid-binding proteins 33
Carbamate kinase-like NAD(P)-binding Rossmann-fold domains 32
Nicotinate/Quinolinate PRTase N-terminal domain-like Nicotinate/Quinolinate PRTase C-terminal domain-like 32
Homeodomain-like FAD-linked reductases, C-terminal domain 32
YrdC/RibB RibA-like 31
WW domain FF domain 33
FYVE/PHD zinc finger Chromo domain-like 33
Ubiquitin-like L domain-like 32
Domain of poly(ADP-ribose) polymerase ADP-ribosylation 33
6-phosphogluconate dehydrogenase C-terminal domain-like Aldolase 31
RNI-like ARM repeat 32
Putative DNA-binding domain Putative DNA-binding domain 31
PH domain-like RCC1/BLIP-II 31
PLP-dependent transferases PLP-dependent transferases 31
RuvA domain 2-like Nucleic acid-binding proteins 33
UDP-Glycosyltransferase/glycogen phosphorylase UDP-Glycosyltransferase/glycogen phosphorylase 32
FYVE/PHD zinc finger SAICAR synthase-like 21
Ribonuclease H-like Alkaline phosphatase-like 21
DUSP-like Ubiquitin-like 21
PreATP-grasp domain ClpP/crotonase 21
Elongation factor Ts (EF-Ts), dimerisation domain Elongation factor Ts (EF-Ts), dimerisation domain 21
HD-domain/PDEase-like EF-hand 22
TrkA C-terminal domain-like TrkA C-terminal domain-like 22
Aldolase Aminoacid dehydrogenase-like, N-terminal domain 21
FYVE/PHD zinc finger Ankyrin repeat 21
Class II aaRS and biotin synthetases Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) 22
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases Staphylococcal nuclease 21
PDZ domain-like TPR-like 21
RuvA domain 2-like SH2 domain 22
Methionyl-tRNA synthetase (MetRS), Zn-domain Nucleotidylyl transferase 22
Ankyrin repeat RNA-binding domain, RBD 22
CAD & PB1 domains RING/U-box 22
Leukotriene A4 hydrolase N-terminal domain ARM repeat 21
C2 domain (Calcium/lipid-binding domain, CaLB) EF-hand 22
NSFL1 (p97 ATPase) cofactor p47, SEP domain Ubiquitin-like 21
F-box domain SET domain 22
Rap30/74 interaction domains "Winged helix" DNA-binding domain 22
FAD/NAD(P)-binding domain SMAD/FHA domain 22
Flavoproteins FMN-binding split barrel 21
TAF(II)230 TBP-binding fragment Ubiquitin-like 21
CAD & PB1 domains UBA-like 22
Tex N-terminal region-like Nucleic acid-binding proteins 22
Glutathione synthetase ATP-binding domain-like ClpP/crotonase 21
Rudiment single hybrid motif ClpP/crotonase 21
SWIB/MDM2 domain SWIB/MDM2 domain 21
Methylglyoxal synthase-like Cytidine deaminase-like 21
Actin-like ATPase domain AF1104-like 22
PH domain-like Phospholipase D/nuclease 21
P-loop containing nucleoside triphosphate hydrolases RNA-binding domain, RBD 21
Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases 22
E set domains RNA-binding domain, RBD 21
Macro domain-like CRAL/TRIO domain 21
Translation proteins Translation proteins 21
Adenine nucleotide alpha hydrolases-like Thioredoxin-like 22
Class II aaRS and biotin synthetases Translation proteins 22
Acid proteases UBA-like 21
Adenine nucleotide alpha hydrolases-like Protein kinase-like (PK-like) 21
Tex N-terminal region-like SH2 domain 22
RNA-binding domain, RBD ENTH/VHS domain 22
Concanavalin A-like lectins/glucanases Concanavalin A-like lectins/glucanases 21
CBS-domain pair Inosine monophosphate dehydrogenase (IMPDH) 21
UBC-like Endosomal sorting complex assembly domain 21
PAP/OAS1 substrate-binding domain PAP/Archaeal CCA-adding enzyme, C-terminal domain 21
Cysteine proteinases DUSP-like 21
Periplasmic binding protein-like II Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain 21
GYF domain SET domain 22
P-loop containing nucleoside triphosphate hydrolases Helical scaffold and wing domains of SecA 22
DNA repair protein MutS, domain III SMR domain-like 21
DNA ligase/mRNA capping enzyme, catalytic domain BRCT domain 22
HAMP domain-like Homodimeric domain of signal transducing histidine kinase 22
6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK Dihydropteroate synthetase-like 22
FAD/NAD(P)-binding domain Thioredoxin-like 21
Diaminopimelate epimerase-like Diaminopimelate epimerase-like 21
Insert subdomain of RNA polymerase alpha subunit C-terminal domain of RNA polymerase alpha subunit 22
TPR-like Homing endonucleases 21
ATP-dependent DNA ligase DNA-binding domain Nucleic acid-binding proteins 21
Taf5 N-terminal domain-like WD40 repeat-like 21
Surp module (SWAP domain) Ubiquitin-like 21
HSP20-like chaperones TPR-like 22
Surp module (SWAP domain) Surp module (SWAP domain) 21
PP2C-like cAMP-binding domain-like 21
Formyltransferase FMT C-terminal domain-like 22
Tudor/PWWP/MBT Homeodomain-like 22
TPR-like Chaperone J-domain 22
Metalloproteases ("zincins"), catalytic domain ARM repeat 21
Cap-Gly domain L domain-like 21
ARM repeat "Winged helix" DNA-binding domain 21
Zinc beta-ribbon Zinc beta-ribbon 21
Tricorn protease domain 2 alpha/beta-Hydrolases 22
UBA-like Hect, E3 ligase catalytic domain 22
BRCT domain ADP-ribosylation 22
HD-domain/PDEase-like TGS-like 22
alpha/beta-Hydrolases RNA-binding domain, RBD 21
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) Translation proteins 22
Ribosomal protein S5 domain 2-like DNA mismatch repair protein MutL 21
Retrovirus zinc finger-like domains RING/U-box 21
RBP11-like subunits of RNA polymerase C-terminal domain of RNA polymerase alpha subunit 22
TAZ domain FYVE/PHD zinc finger 21
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin Protein kinase-like (PK-like) 22
EF-hand Calponin-homology domain, CH-domain 22
TAZ domain TAZ domain 21
Galactose-binding domain-like L domain-like 22
4Fe-4S ferredoxins P-loop containing nucleoside triphosphate hydrolases 21
Ribonuclease H-like RuvA domain 2-like 22
N-terminal nucleophile aminohydrolases (Ntn hydrolases) SIS domain 21
TPR-like PUA domain-like 21
Nucleic acid-binding proteins UBA-like 21
P-loop containing nucleoside triphosphate hydrolases Macro domain-like 22
RNA-binding domain, RBD Clavaminate synthase-like 21
beta-beta-alpha zinc fingers SET domain 21
PUA domain-like Nucleotidylyl transferase 21
HAD-like dsRNA-binding domain-like 22
UDP-Glycosyltransferase/glycogen phosphorylase GHMP Kinase, C-terminal domain 22
PUA domain-like S-adenosyl-L-methionine-dependent methyltransferases 22
ACT-like Formyltransferase 21
4Fe-4S ferredoxins Metallo-hydrolase/oxidoreductase 21
PreATP-grasp domain Carbamoyl phosphate synthetase, large subunit connection domain 21
Tudor/PWWP/MBT Chromo domain-like 22
Nucleotidyltransferase TPR-like 22
UraD-Like Transthyretin (synonym: prealbumin) 21
PPK N-terminal domain-like PHP14-like 22
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase DNA mismatch repair protein MutL 21
Acyl-CoA N-acyltransferases (Nat) Protein kinase-like (PK-like) 22
Protein kinase-like (PK-like) Acyl-CoA dehydrogenase C-terminal domain-like 21
ARID-like HSP20-like chaperones 21
CBS-domain pair Aspartate/ornithine carbamoyltransferase 21
2Fe-2S ferredoxin-like alpha-helical ferredoxin 21
4'-phosphopantetheinyl transferase 4'-phosphopantetheinyl transferase 21
Periplasmic binding protein-like I Periplasmic binding protein-like II 22
UBA-like NSFL1 (p97 ATPase) cofactor p47, SEP domain 21
FYVE/PHD zinc finger GroEL apical domain-like 21
(Phosphotyrosine protein) phosphatases II DNA ligase/mRNA capping enzyme, catalytic domain 22
E set domains AMPKBI-like 21
FAS1 domain Amidase signature (AS) enzymes 22
P-loop containing nucleoside triphosphate hydrolases SMR domain-like 21
Single hybrid motif ClpP/crotonase 21
Protein kinase-like (PK-like) Acyl-CoA dehydrogenase NM domain-like 21
EF-hand RING/U-box 22
HD-domain/PDEase-like TPR-like 22
Hypothetical protein c14orf129, hspc210 TPR-like 21
FYVE/PHD zinc finger Clavaminate synthase-like 21
LysM domain Protein kinase-like (PK-like) 22
Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 Elongation factor TFIIS domain 2 21
BRCT domain WGR domain-like 22
Surp module (SWAP domain) ENTH/VHS domain 22
PH domain-like GTPase activation domain, GAP 21
Acyl-CoA binding protein Kelch motif 22
Starch-binding domain-like Galactose-binding domain-like 22
N-terminal nucleophile aminohydrolases (Ntn hydrolases) PRTase-like 22
P-loop containing nucleoside triphosphate hydrolases HAND domain of the nucleosome remodeling ATPase ISWI 21
Arp2/3 complex subunits Arp2/3 complex subunits 21
Dom34/Pelota N-terminal domain-like L30e-like 21
CCCH zinc finger ARM repeat 21
Starch-binding domain-like (Trans)glycosidases 22
CCCH zinc finger Protein kinase-like (PK-like) 21
eIF2alpha middle domain-like eIF-2-alpha, C-terminal domain 21
Eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment DNA breaking-rejoining enzymes 21
Alpha-L RNA-binding motif Pseudouridine synthase 22
Zn-dependent exopeptidases Carboxypeptidase regulatory domain-like 22
Ribonuclease H-like HRDC-like 22
Ribonuclease PH domain 2-like Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 22
GST C-terminal domain-like eEF-1beta-like 22
TRAF domain-like TRAF domain-like 22
Ubiquitin-like TPR-like 21
Ribonuclease H-like Nucleic acid-binding proteins 22
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 Nucleic acid-binding proteins 22
Concanavalin A-like lectins/glucanases RING/U-box 22
HIT-like HIT-like 21
Class II aaRS ABD-related C-terminal domain of ProRS 21
Nucleic acid-binding proteins Elongation factor Ts (EF-Ts), dimerisation domain 21
Ribose/Galactose isomerase RpiB/AlsB RmlC-like cupins 21
lambda repressor-like DNA-binding domains Periplasmic binding protein-like I 22
Metallo-hydrolase/oxidoreductase FMN-binding split barrel 21
CAD & PB1 domains Protein kinase-like (PK-like) 21
Nucleotidyltransferase PAP/Archaeal CCA-adding enzyme, C-terminal domain 21
Quinoprotein alcohol dehydrogenase-like Quinoprotein alcohol dehydrogenase-like 22
SNARE-like Domain of the SRP/SRP receptor G-proteins 21
PGBD-like Metalloproteases ("zincins"), catalytic domain 21
P-loop containing nucleoside triphosphate hydrolases Prokaryotic type KH domain (KH-domain type II) 22
Rhomboid-like Ran binding protein zinc finger-like 22
Protein kinase-like (PK-like) HCP-like 21
Endosomal sorting complex assembly domain VPS28 C-terminal domain-like 21
(Trans)glycosidases Chitinase insertion domain 21
Acyl-CoA N-acyltransferases (Nat) BRCT domain 22
GYF domain CCCH zinc finger 21
Eukaryotic type KH-domain (KH-domain type I) RNA-binding domain, RBD 21
TAZ domain RING/U-box 21
Clavaminate synthase-like S-adenosyl-L-methionine-dependent methyltransferases 21
WWE domain ADP-ribosylation 21
Carbamate kinase-like Carbamate kinase-like 22
ARID-like Clavaminate synthase-like 21
Pre-protein crosslinking domain of SecA Helical scaffold and wing domains of SecA 22
Toll/Interleukin receptor TIR domain TPR-like 22
Nucleotidyltransferase EF-hand 22
Ubiquitin-like PUG domain-like 21
Fibronectin type III Fibronectin type III 22
L domain-like TPR-like 22
Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 Zinc beta-ribbon 21
Hsp33 domain HSP33 redox switch-like 21
DNA-binding domain DNA-binding pseudobarrel domain 21
RING/U-box UBC-like 22
Tex N-terminal region-like Ribonuclease H-like 22
RING/U-box Protein kinase-like (PK-like) 21
UDP-Glycosyltransferase/glycogen phosphorylase Ribosomal protein S5 domain 2-like 22
Ankyrin repeat CCCH zinc finger 22
Zn-dependent exopeptidases Transferrin receptor-like dimerisation domain 21
Glutathione synthetase ATP-binding domain-like Carbamoyl phosphate synthetase, large subunit connection domain 21
CarD-like P-loop containing nucleoside triphosphate hydrolases 22
MIT domain P-loop containing nucleoside triphosphate hydrolases 22
Class II aaRS and biotin synthetases C-terminal domain of ProRS 21
TAF(II)230 TBP-binding fragment Bromodomain 21
Pseudouridine synthase PUA domain-like 21
Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain SAICAR synthase-like 21
Carbamate kinase-like ALDH-like 21
PreATP-grasp domain Methylglyoxal synthase-like 21
YjeF N-terminal domain-like FMN-binding split barrel 21
F-box domain HCP-like 21
Ribonuclease H-like SH2 domain 22
Nucleotidyltransferase TGS-like 22
FabD/lysophospholipase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 22
R1 subunit of ribonucleotide reductase, N-terminal domain PFL-like glycyl radical enzymes 21
Nucleotidylyl transferase Nucleotidylyl transferase 21
Glutathione synthetase ATP-binding domain-like Methylglyoxal synthase-like 21
Class I glutamine amidotransferase-like Adenine nucleotide alpha hydrolases-like 22
RNA-binding domain, RBD Surp module (SWAP domain) 22
PSPTO4464-like DNA/RNA polymerases 21
HAND domain of the nucleosome remodeling ATPase ISWI Homeodomain-like 21
Ribosomal protein S5 domain 2-like Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 22
MurCD N-terminal domain MurD-like peptide ligases, peptide-binding domain 21
Chromo domain-like Homeodomain-like 22
Ricin B-like lectins Ricin B-like lectins 22
RuvA domain 2-like RuvA domain 2-like 22
HLH, helix-loop-helix DNA-binding domain Mitotic arrest deficient-like 1, Mad1 21
TPR-like Cysteine proteinases 21
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) ThrRS/AlaRS common domain 22
Metallo-hydrolase/oxidoreductase Flavoproteins 21
DEK C-terminal domain SWIB/MDM2 domain 21
BRCT domain Domain of poly(ADP-ribose) polymerase 22
Nucleic acid-binding proteins BRCT domain 22
SNARE-like P-loop containing nucleoside triphosphate hydrolases 21
Glutathione synthetase ATP-binding domain-like Phosphoglycerate mutase-like 21
PH domain-like (Phosphotyrosine protein) phosphatases II 21
POZ domain TPR-like 22
Tex N-terminal region-like RuvA domain 2-like 22
Sec63 N-terminal domain-like Sec63 N-terminal domain-like 21
L30e-like alpha/beta knot 22
PHP14-like Phospholipase D/nuclease 22
Protease propeptides/inhibitors Subtilisin-like 22
Nucleic acid-binding proteins SH2 domain 22
"Winged helix" DNA-binding domain E set domains 21
E set domains CBS-domain pair 21
RNA-binding domain, RBD HCP-like 22
Aldolase 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 21
Plant lectins/antimicrobial peptides Barwin-like endoglucanases 22
Ribonuclease PH domain 2-like Eukaryotic type KH-domain (KH-domain type I) 22
PRTase-like Ribulose-phoshate binding barrel 21
Voltage-gated potassium channels E set domains 22
Ran binding protein zinc finger-like DNase I-like 21
PLP-dependent transferases Ornithine decarboxylase C-terminal domain 22
Ubiquitin-like Acid proteases 21
Acyl-CoA N-acyltransferases (Nat) Acyl-CoA N-acyltransferases (Nat) 21
PSPTO4464-like Ribonuclease H-like 21
Galactose mutarotase-like Starch-binding domain-like 22
CCCH zinc finger HIT-like 21
MurCD N-terminal domain MurD-like peptide ligases, catalytic domain 21
Nucleic acid-binding proteins eIF2alpha middle domain-like 21
Thiamin phosphate synthase P-loop containing nucleoside triphosphate hydrolases 21
PUA domain-like P-loop containing nucleoside triphosphate hydrolases 22
vWA-like Cysteine-rich domain 22
Clavaminate synthase-like beta-beta-alpha zinc fingers 21
Nucleotidyltransferase Poly A polymerase C-terminal region-like 21
PPK N-terminal domain-like Phospholipase D/nuclease 22
ARID-like HMG-box 21
SufE/NifU NadA-like 21
PA domain Transferrin receptor-like dimerisation domain 21
Ribosomal protein S5 domain 2-like Eukaryotic type KH-domain (KH-domain type I) 22
TPR-like "Winged helix" DNA-binding domain 21
WD40 repeat-like POZ domain 21
Hypothetical protein SAV1430 Fe-S cluster assembly (FSCA) domain-like 21
Protein kinase-like (PK-like) beta-lactamase/transpeptidase-like 21
Chaperone J-domain Thioredoxin-like 22
Chaperone J-domain ARM repeat 22
Ribonuclease H-like Ribonuclease H-like 21
Carbamoyl phosphate synthetase, large subunit connection domain Methylglyoxal synthase-like 21
Dom34/Pelota N-terminal domain-like Translational machinery components 21
FAD/NAD(P)-binding domain ISP domain 22
Phosphohistidine domain Phosphoenolpyruvate/pyruvate domain 22
Cryptochrome/photolyase, N-terminal domain alpha/beta-Hydrolases 21
Cysteine proteinases Sec-C motif 21
SMAD/FHA domain PP2C-like 21
Ubiquitin-like Bromodomain 21
P-loop containing nucleoside triphosphate hydrolases TPR-like 22
Nucleic acid-binding proteins eIF-2-alpha, C-terminal domain 21
Ribokinase-like Thiamin phosphate synthase 21
Radical SAM enzymes Radical SAM enzymes 22
CCCH zinc finger WD40 repeat-like 21
Elongation factor TFIIS domain 2 Zinc beta-ribbon 21
PX domain BAR/IMD domain-like 22
beta-N-acetylhexosaminidase-like domain (Trans)glycosidases 22
Galactose-binding domain-like ARM repeat 21
S-adenosyl-L-methionine-dependent methyltransferases PLP-dependent transferases 21
P-loop containing nucleoside triphosphate hydrolases Glucocorticoid receptor-like (DNA-binding domain) 22
PurM N-terminal domain-like PurM N-terminal domain-like 11
Ribonuclease H-like RING/U-box 11
Eukaryotic type KH-domain (KH-domain type I) RING/U-box 11
SWIB/MDM2 domain GYF domain 11
IlvD/EDD N-terminal domain-like LeuD/IlvD-like 11
RmlC-like cupins RmlC-like cupins 11
MoeA N-terminal region -like MoeA C-terminal domain-like 11
P-loop containing nucleoside triphosphate hydrolases PAH2 domain 11
Tubulin C-terminal domain-like FAD-binding/transporter-associated domain-like 11
Homeodomain-like Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 11
PP2C-like PP2C-like 11
Hypothetical protein PA1324 Carboxypeptidase regulatory domain-like 11
Glucocorticoid receptor-like (DNA-binding domain) ADP-ribosylation 11
Glutathione synthetase ATP-binding domain-like N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) 11
BRCT domain PsbU/PolX domain-like 11
RING/U-box Cyclophilin-like 11
Thioredoxin-like DsbB-like 11
Fibronectin type III Histone-fold 11
Calponin-homology domain, CH-domain LysM domain 11
ARM repeat FabD/lysophospholipase-like 11
S-adenosyl-L-methionine-dependent methyltransferases C-type lectin-like 11
NusB-like S-adenosyl-L-methionine-dependent methyltransferases 11
AN1-like Zinc finger beta-beta-alpha zinc fingers 11
PurM C-terminal domain-like PurM C-terminal domain-like 11
Actin-like ATPase domain Nucleotide-diphospho-sugar transferases 11
EF-hand PLC-like phosphodiesterases 11
L domain-like FabD/lysophospholipase-like 11
Phosphoglycerate mutase-like Phosphoglycerate mutase-like 11
ADP-ribosylation UBC-like 11
"Winged helix" DNA-binding domain Periplasmic binding protein-like II 11
vWA-like C-terminal domain of Ku80 11
WWE domain RING/U-box 11
Alkaline phosphatase-like Alkaline phosphatase-like 11
P-loop containing nucleoside triphosphate hydrolases Formin homology 2 domain (FH2 domain) 11
C2 domain (Calcium/lipid-binding domain, CaLB) Protein kinase-like (PK-like) 11
Concanavalin A-like lectins/glucanases Cysteine proteinases 11
ARM repeat Adenine nucleotide alpha hydrolases-like 11
DNA-binding domain P-loop containing nucleoside triphosphate hydrolases 11
Class I glutamine amidotransferase-like ADC synthase 11
Putative isomerase YbhE RING/U-box 11
Formyltransferase ClpP/crotonase 11
FYSH domain beta-beta-alpha zinc fingers 11
MFS general substrate transporter Chaperone J-domain 11
Galactose oxidase, central domain Kelch motif 11
Thiamin diphosphate-binding fold (THDP-binding) alpha/beta-Hydrolases 11
Tetrapyrrole methylase HemD-like 11
Protein kinase-like (PK-like) Class II aaRS ABD-related 11
ADC synthase Enolase N-terminal domain-like 11
Staphylococcal nuclease Staphylococcal nuclease 11
Alkaline phosphatase-like NAD(P)-binding Rossmann-fold domains 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase RING/U-box 11
Ran binding protein zinc finger-like P-loop containing nucleoside triphosphate hydrolases 11
FAD-binding/transporter-associated domain-like Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain 11
WD40 repeat-like Bromodomain 11
Citrate synthase Citrate synthase 11
PRC-barrel domain Nucleotide-diphospho-sugar transferases 11
Heme-dependent peroxidases SMR domain-like 11
UBC-like Class II aaRS and biotin synthetases 11
Ribonuclease H-like DNA repair protein MutS, domain II 11
Glutathione synthetase ATP-binding domain-like Phosphohistidine domain 11
Formate/glycerate dehydrogenase catalytic domain-like Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 11
Methylated DNA-protein cysteine methyltransferase domain Methylated DNA-protein cysteine methyltransferase, C-terminal domain 11
BSD domain-like BSD domain-like 11
Tudor/PWWP/MBT DNA repair protein MutS, domain II 11
Translation proteins Nucleotide-diphospho-sugar transferases 11
BRCT domain DNA/RNA polymerases 11
P-loop containing nucleoside triphosphate hydrolases Isocitrate/Isopropylmalate dehydrogenase-like 11
POZ domain Galactose-binding domain-like 11
SAM/Pointed domain Histone-fold 11
FAD-binding/transporter-associated domain-like FAD-binding/transporter-associated domain-like 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases Nucleic acid-binding proteins 11
BRCT domain Nucleotidyltransferase 11
beta-beta-alpha zinc fingers S-adenosyl-L-methionine-dependent methyltransferases 11
The spindle assembly checkpoint protein mad2 The spindle assembly checkpoint protein mad2 11
PurS-like PurM N-terminal domain-like 11
YjgF-like YjgF-like 11
Lipocalins Lipocalins 11
Class II aaRS and biotin synthetases Anticodon-binding domain of PheRS 11
Nucleotidylyl transferase Nucleic acid-binding proteins 11
Cytochrome P450 Cytochrome P450 11
Alkaline phosphatase-like Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 11
Metallo-dependent phosphatases Metallo-dependent phosphatases 11
Starch-binding domain-like Starch-binding domain-like 11
WD40 repeat-like DPP6 N-terminal domain-like 11
BRCT domain post-AAA+ oligomerization domain-like 11
beta and beta-prime subunits of DNA dependent RNA-polymerase S-adenosyl-L-methionine-dependent methyltransferases 11
Formate dehydrogenase/DMSO reductase, domains 1-3 ADC-like 11
DHS-like NAD/FAD-binding domain Enolase C-terminal domain-like 11
FYSH domain Hypothetical protein AF0491, middle domain 11
NAD(P)-binding Rossmann-fold domains Dimeric alpha+beta barrel 11
TGS-like ACT-like 11
ValRS/IleRS/LeuRS editing domain ValRS/IleRS/LeuRS editing domain 11
S-adenosyl-L-methionine-dependent methyltransferases ACT-like 11
Chaperone J-domain HSC20 (HSCB), C-terminal oligomerisation domain 11
SPOC domain-like SAP domain 11
HisI-like all-alpha NTP pyrophosphatases 11
ARM repeat YVTN repeat-like/Quinoprotein amine dehydrogenase 11
PLP-dependent transferases 5' to 3' exonuclease, C-terminal subdomain 11
TGS-like ThrRS/AlaRS common domain 11
cAMP-binding domain-like L9 N-domain-like 11
L domain-like RING/U-box 11
Cysteine proteinases Calpain large subunit, middle domain (domain III) 11
Thioredoxin-like VC0467-like 11
Calponin-homology domain, CH-domain ARM repeat 11
P-loop containing nucleoside triphosphate hydrolases DNA ligase/mRNA capping enzyme, catalytic domain 11
Nucleotidylyl transferase An anticodon-binding domain of class I aminoacyl-tRNA synthetases 11
beta-beta-alpha zinc fingers CCCH zinc finger 11
Rhodanese/Cell cycle control phosphatase alpha/beta-Hydrolases 11
Thioredoxin-like NHL repeat 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) N-terminal nucleophile aminohydrolases (Ntn hydrolases) 11
N-terminal domain of adenylylcyclase associated protein, CAP C-terminal domain of adenylylcyclase associated protein 11
Pre-PUA domain PUA domain-like 11
Translation proteins PRC-barrel domain 11
2Fe-2S ferredoxin-like 2Fe-2S ferredoxin-like 11
Heme-dependent peroxidases Heme-dependent peroxidases 11
SAP domain ADP-ribosylation 11
Concanavalin A-like lectins/glucanases Calpain large subunit, middle domain (domain III) 11
Tudor/PWWP/MBT DNA repair protein MutS, domain III 11
Nucleotidyltransferase ACT-like 11
Magnesium transport protein CorA, transmembrane region EF-hand 11
DNA polymerase beta, N-terminal domain-like PsbU/PolX domain-like 11
Cyclophilin-like Retrovirus zinc finger-like domains 11
SSo0622-like Kelch motif 11
Tex N-terminal region-like Retrovirus zinc finger-like domains 11
Carbamate kinase-like Acyl-CoA N-acyltransferases (Nat) 11
PsbU/PolX domain-like Nucleotidyltransferase 11
L domain-like Kelch motif 11
SAM/Pointed domain P-loop containing nucleoside triphosphate hydrolases 11
Kelch motif S-adenosyl-L-methionine-dependent methyltransferases 11
RuvA domain 2-like Retrovirus zinc finger-like domains 11
N-utilization substance G protein NusG, N-terminal domain Translation proteins SH3-like domain 11
Molybdenum cofactor biosynthesis proteins Molybdenum cofactor biosynthesis proteins 11
GYF domain F-box domain 11
Urease, beta-subunit Composite domain of metallo-dependent hydrolases 11
Voltage-gated potassium channels L9 N-domain-like 11
PH domain-like "Winged helix" DNA-binding domain 11
TPR-like Metallo-hydrolase/oxidoreductase 11
GroEL-intermediate domain like GroEL-intermediate domain like 11
TPR-like Chlorophyll a-b binding protein 11
Adenine nucleotide alpha hydrolases-like GMP synthetase C-terminal dimerisation domain 11
Six-hairpin glycosidases Families 57/38 glycoside transferase middle domain 11
Fibronectin type III (Trans)glycosidases 11
Lysozyme-like Lysozyme-like 11
FGAM synthase PurL, linker domain PurM C-terminal domain-like 11
Adenine nucleotide alpha hydrolases-like YjgF-like 11
PDZ domain-like Rubredoxin-like 11
TATA-box binding protein-like DNA-glycosylase 11
UBA-like Thioredoxin-like 11
Molybdenum cofactor biosynthesis proteins MoeA C-terminal domain-like 11
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 Eukaryotic type KH-domain (KH-domain type I) 11
Homeodomain-like Molybdopterin synthase subunit MoaE 11
Ribonuclease H-like DNA repair protein MutS, domain III 11
Glutamine synthetase/guanido kinase GatB/YqeY motif 11
USP8 N-terminal domain-like JAB1/MPN domain 11
Ran binding protein zinc finger-like Translation proteins 11
Chromo domain-like S-adenosyl-L-methionine-dependent methyltransferases 11
GroEL-intermediate domain like SAICAR synthase-like 11
P-loop containing nucleoside triphosphate hydrolases HIT-like 11
Ubiquitin-like HAD-like 11
Tricorn protease N-terminal domain DPP6 N-terminal domain-like 11
PurS-like PurM C-terminal domain-like 11
Cryptochrome/photolyase, N-terminal domain Cryptochrome/photolyase, N-terminal domain 11
(Phosphotyrosine protein) phosphatases II NAD kinase/diacylglycerol kinase-like 11
Heme oxygenase-like HAD-like 11
THUMP domain-like S-adenosyl-L-methionine-dependent methyltransferases 11
HIT/MYND zinc finger-like Creatinase/aminopeptidase 11
FAD-linked reductases, C-terminal domain Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 11
S13-like H2TH domain Glucocorticoid receptor-like (DNA-binding domain) 11
RNI-like WD40 repeat-like 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases tRNA-binding arm 11
Single hybrid motif Single hybrid motif 11
Glucocorticoid receptor-like (DNA-binding domain) Domain of poly(ADP-ribose) polymerase 11
L9 N-domain-like Ribonuclease H-like 11
Formiminotransferase domain of formiminotransferase-cyclodeaminase. Formiminotransferase domain of formiminotransferase-cyclodeaminase. 11
Thiamin diphosphate-binding fold (THDP-binding) Enolase N-terminal domain-like 11
Cytochrome P450 Protein kinase-like (PK-like) 11
UBC-like Ribosomal protein S5 domain 2-like 11
Chaperone J-domain RNA-binding domain, RBD 11
ARM repeat DNA-glycosylase 11
ARM repeat Clavaminate synthase-like 11
Obg GTP-binding protein N-terminal domain Obg GTP-binding protein C-terminal domain 11
UBA-like PUG domain-like 11
SWIB/MDM2 domain Plus3-like 11
Cysteine proteinases Penicillin binding protein dimerisation domain 11
PurS-like FGAM synthase PurL, linker domain 11
Starch-binding domain-like Carboxypeptidase regulatory domain-like 11
Prokaryotic type I DNA topoisomerase Retrovirus zinc finger-like domains 11
SH2 domain Retrovirus zinc finger-like domains 11
Metalloproteases ("zincins"), catalytic domain HAD-like 11
WD40 repeat-like Cyclophilin-like 11
"Winged helix" DNA-binding domain Zinc beta-ribbon 11
BRCT domain RING/U-box 11
PUA domain-like alpha/beta knot 11
Hypothetical protein PA1324 Starch-binding domain-like 11
TPR-like RNA-binding domain, RBD 11
BRCT domain FYVE/PHD zinc finger 11
Ubiquitin-like Protein kinase-like (PK-like) 11
Plant lectins/antimicrobial peptides (Trans)glycosidases 11
P-loop containing nucleoside triphosphate hydrolases Obg GTP-binding protein C-terminal domain 11
WW domain S-adenosyl-L-methionine-dependent methyltransferases 11
Riboflavin synthase domain-like Riboflavin synthase domain-like 11
ABC transporter transmembrane region cAMP-binding domain-like 11
Nucleic acid-binding proteins TPR-like 11
P-loop containing nucleoside triphosphate hydrolases CYTH-like phosphatases 11
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB transmembrane domain 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
R3H domain P-loop containing nucleoside triphosphate hydrolases 11
CarD-like TRCF domain-like 11
Chaperone J-domain beta-beta-alpha zinc fingers 11
WD40 repeat-like Cysteine proteinases 11
UBC-like Class II aaRS ABD-related 11
Photosystem II antenna protein-like Photosystem II reaction center protein T, PsbT 11
ISP domain Chlorophyll a-b binding protein 11
Carboxypeptidase regulatory domain-like Carboxypeptidase regulatory domain-like 11
UBC-like Protein kinase-like (PK-like) 11
POZ domain RNI-like 11
alpha/beta-Hydrolases P-loop containing nucleoside triphosphate hydrolases 11
BAG domain EF-hand 11
vWA-like Formin homology 2 domain (FH2 domain) 11
ACT-like Phosphoenolpyruvate/pyruvate domain 11
ADC synthase Enolase C-terminal domain-like 11
Enolase N-terminal domain-like alpha/beta-Hydrolases 11
SAP domain SAP domain 11
GST C-terminal domain-like Nucleic acid-binding proteins 11
Myosin rod fragments Myosin rod fragments 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
HAMP domain-like PYP-like sensor domain (PAS domain) 11
Metallo-hydrolase/oxidoreductase Metallo-hydrolase/oxidoreductase 11
Retrovirus zinc finger-like domains SET domain 11
F-box domain SMI1/KNR4-like 11
Protease propeptides/inhibitors PA domain 11
Protein kinase-like (PK-like) Class II aaRS and biotin synthetases 11
FAD/NAD(P)-binding domain S-adenosyl-L-methionine-dependent methyltransferases 11
Mitochondrial carrier Voltage-gated potassium channels 11
PreATP-grasp domain N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) 11
Type II DNA topoisomerase GyrA/ParC C-terminal domain-like 11
beta-Galactosidase/glucuronidase domain Galactose mutarotase-like 11
F-box domain Protein kinase-like (PK-like) 11
Thiamin diphosphate-binding fold (THDP-binding) EF-hand 11
PapD-like Ankyrin repeat 11
Ran binding protein zinc finger-like EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 11
Actin-like ATPase domain Insert subdomain of RNA polymerase alpha subunit 11
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphohistidine domain 11
SufE/NifU SufE/NifU 11
Signal peptide-binding domain Sec-C motif 11
ADC synthase Thiamin diphosphate-binding fold (THDP-binding) 11
HD-domain/PDEase-like Nucleotide cyclase 11
Nucleoside diphosphate kinase, NDK Nucleoside diphosphate kinase, NDK 11
RCC1/BLIP-II Hect, E3 ligase catalytic domain 11
NagB/RpiA/CoA transferase-like Protein kinase-like (PK-like) 11
FGAM synthase PurL, linker domain Class I glutamine amidotransferase-like 11
WD40 repeat-like TolB, C-terminal domain 11
RNI-like TPR-like 11
Nucleotide-diphospho-sugar transferases ARM repeat 11
Urease, gamma-subunit Urease, beta-subunit 11
ABC transporter transmembrane region alpha/beta-Hydrolases 11
Urease, beta-subunit Metallo-dependent hydrolases 11
Class I glutamine amidotransferase-like Ribulose-phoshate binding barrel 11
"Winged helix" DNA-binding domain PLP-dependent transferases 11
Helical scaffold and wing domains of SecA Helical scaffold and wing domains of SecA 11
Class I glutamine amidotransferase-like LD-carboxypeptidase A C-terminal domain-like 11
CCCH zinc finger Tubby C-terminal domain-like 11
Hect, E3 ligase catalytic domain Hect, E3 ligase catalytic domain 11
Class I glutamine amidotransferase-like GMP synthetase C-terminal dimerisation domain 11
dsRNA-binding domain-like S-adenosyl-L-methionine-dependent methyltransferases 11
Chromo domain-like Ankyrin repeat 11
Amidase signature (AS) enzymes Amidase signature (AS) enzymes 11
Ypt/Rab-GAP domain of gyp1p Tropomyosin 11
C2 domain (Calcium/lipid-binding domain, CaLB) vWA-like 11
HprK N-terminal domain-like Isocitrate/Isopropylmalate dehydrogenase-like 11
BRCT domain DNA polymerase beta, N-terminal domain-like 11
Nudix PHP14-like 11
Myosin rod fragments Protein kinase-like (PK-like) 11
Subtilisin-like Collagen-binding domain 11
FYVE/PHD zinc finger DNA-binding domain 11
P-loop containing nucleoside triphosphate hydrolases HprK N-terminal domain-like 11
EF-hand SAM/Pointed domain 11
Concanavalin A-like lectins/glucanases SH2 domain 11
Domain of the SRP/SRP receptor G-proteins Signal peptide-binding domain 11
Trimeric LpxA-like enzymes Trimeric LpxA-like enzymes 11
PIN domain-like Nucleic acid-binding proteins 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Nucleotidylyl transferase 11
P-loop containing nucleoside triphosphate hydrolases beta-beta-alpha zinc fingers 11
(Phosphotyrosine protein) phosphatases II P-loop containing nucleoside triphosphate hydrolases 11
P-loop containing nucleoside triphosphate hydrolases Tropomyosin 11
PH domain-like HMG-box 11
RNA-binding domain, RBD PWI domain 11
UBC-like P-loop containing nucleoside triphosphate hydrolases 11
P-loop containing nucleoside triphosphate hydrolases MOP-like 11
Acid phosphatase/Vanadium-dependent haloperoxidase Acid phosphatase/Vanadium-dependent haloperoxidase 11
CheY-like C-terminal effector domain of the bipartite response regulators 11
Galactose-binding domain-like Rhodanese/Cell cycle control phosphatase 11
TPR-like SMR domain-like 11
Thiamin diphosphate-binding fold (THDP-binding) Enolase C-terminal domain-like 11
Clavaminate synthase-like RING/U-box 11
Urease, gamma-subunit Metallo-dependent hydrolases 11
WD40 repeat-like Nucleoporin domain 11
P-loop containing nucleoside triphosphate hydrolases cAMP-binding domain-like 11
FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) Protein kinase-like (PK-like) 11
TPR-like PH domain-like 11
Periplasmic binding protein-like II Ribulose-phoshate binding barrel 11
L domain-like WD40 repeat-like 11
WD40 repeat-like Ribonuclease H-like 11
F-box domain TPR-like 11
SMAD/FHA domain BRCT domain 11
P-loop containing nucleoside triphosphate hydrolases Skp1 dimerisation domain-like 11
TGS-like Class II aaRS and biotin synthetases 11
Glucocorticoid receptor-like (DNA-binding domain) BRCT domain 11
FKBP-like Rhodanese/Cell cycle control phosphatase 11
Methyl-accepting chemotaxis protein (MCP) signaling domain Protein kinase-like (PK-like) 11
RING/U-box VC0467-like 11
Ribosomal protein S5 domain 2-like Concanavalin A-like lectins/glucanases 11
SGNH hydrolase FAS1 domain 11
Ribokinase-like NAD(P)-binding Rossmann-fold domains 11
Lysozyme-like beta-lactamase/transpeptidase-like 11
SAP domain Domain of poly(ADP-ribose) polymerase 11
beta and beta-prime subunits of DNA dependent RNA-polymerase DNA/RNA polymerases 11
ADC synthase DHS-like NAD/FAD-binding domain 11
EF-hand WD40 repeat-like 11
Fe-S cluster assembly (FSCA) domain-like P-loop containing nucleoside triphosphate hydrolases 11
PUA domain-like Ribosomal protein S5 domain 2-like 11
P-loop containing nucleoside triphosphate hydrolases vWA-like 11
alpha/beta knot Nucleic acid-binding proteins 11
FKBP-like S-adenosyl-L-methionine-dependent methyltransferases 11
DHS-like NAD/FAD-binding domain Enolase N-terminal domain-like 11
alpha/beta-Hydrolases Apolipoprotein 11
Clc chloride channel Clc chloride channel 11
Eukaryotic type KH-domain (KH-domain type I) HD-domain/PDEase-like 11
Six-hairpin glycosidases AbfB domain 11
F-box domain LysM domain 11
CheY-like Periplasmic binding protein-like II 11
PLP-dependent transferases MOSC N-terminal domain-like 11
Ribonuclease H-like P-loop containing nucleoside triphosphate hydrolases 11
SPOC domain-like C-terminal domain of Ku80 11
FYVE/PHD zinc finger TPR-like 11
Staphylococcal nuclease Tudor/PWWP/MBT 11
Macro domain-like HIT-like 11
2Fe-2S ferredoxin-like Formate dehydrogenase/DMSO reductase, domains 1-3 11
Apolipoprotein A-I Apolipoprotein A-I 11
Eukaryotic RPB5 N-terminal domain Eukaryotic RPB5 N-terminal domain 11
DNase I-like C2 domain (Calcium/lipid-binding domain, CaLB) 11
SAP domain Acid proteases 11
Galactose oxidase, central domain Metallo-dependent phosphatases 11
F-box domain L domain-like 11
(Trans)glycosidases MFS general substrate transporter 11
Sec63 N-terminal domain-like DNA/RNA polymerases 11
Starch-binding domain-like E set domains 11
Chaperone J-domain E set domains 11
Acetyl-CoA synthetase-like Quinoprotein alcohol dehydrogenase-like 11
(Trans)glycosidases Ricin B-like lectins 11
Cysteine proteinases beta-lactamase/transpeptidase-like 11
(Trans)glycosidases (Trans)glycosidases 11
FAD/NAD(P)-binding domain HI0933 insert domain-like 11
N-terminal domain of MutM-like DNA repair proteins Glucocorticoid receptor-like (DNA-binding domain) 11
Chaperone J-domain Sec63 N-terminal domain-like 11
Clavaminate synthase-like Protein kinase-like (PK-like) 11
Cysteine proteinases Ribonuclease H-like 11
dsRNA-binding domain-like FKBP-like 11
Adenine nucleotide alpha hydrolases-like MesJ substrate recognition domain-like 11
MOSC N-terminal domain-like PK beta-barrel domain-like 11
FGAM synthase PurL, linker domain PurM N-terminal domain-like 11
Toll/Interleukin receptor TIR domain RING/U-box 11
R3H domain Ankyrin repeat 11
PurS-like Class I glutamine amidotransferase-like 11
Ankyrin repeat RCC1/BLIP-II 11
RuBisCO, small subunit RuBisCO, small subunit 11
Ankyrin repeat S-adenosyl-L-methionine-dependent methyltransferases 11
Nucleotide-binding domain FAD/NAD(P)-binding domain 11
FMT C-terminal domain-like ClpP/crotonase 11
DNA-binding domain Bromodomain 11
Tryptophan synthase beta subunit-like PLP-dependent enzymes Tryptophan synthase beta subunit-like PLP-dependent enzymes 11
PurM C-terminal domain-like Class I glutamine amidotransferase-like 11
F-box domain Galactose-binding domain-like 11
RCC1/BLIP-II Protein kinase-like (PK-like) 11
ValRS/IleRS/LeuRS editing domain tRNA-binding arm 11
Glycoside hydrolase/deacetylase ABC transporter transmembrane region 11
P-loop containing nucleoside triphosphate hydrolases TRCF domain-like 11
Enolase C-terminal domain-like alpha/beta-Hydrolases 11
SAP domain WGR domain-like 11
PA domain EGF/Laminin 11
Glutathione synthetase ATP-binding domain-like Phosphoenolpyruvate/pyruvate domain 11
Macro domain-like Macro domain-like 11
FAD/NAD(P)-binding domain Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 11
BRCT domain Thioredoxin-like 11
HD-domain/PDEase-like ACT-like 11
Glycoside hydrolase/deacetylase alpha/beta-Hydrolases 11
Starch-binding domain-like Glycosyl hydrolase domain 11
Translation proteins SH3-like domain Ribosomal protein L16p/L10e 11
DNA polymerase beta, N-terminal domain-like Nucleotidyltransferase 11
Tryptophan synthase beta subunit-like PLP-dependent enzymes ACT-like 11
PH domain-like BSD domain-like 11
RNA-binding domain, RBD Tubby C-terminal domain-like 11
Cyclophilin-like RNA-binding domain, RBD 11
WD40 repeat-like TPR-like 11
dsRNA-binding domain-like UBC-like 11
S-adenosyl-L-methionine-dependent methyltransferases Putative methyltransferase TM0872, insert domain 11
Toll/Interleukin receptor TIR domain RNI-like 11
Phage fibre proteins RNA-binding domain, RBD 11
SSo0622-like S-adenosyl-L-methionine-dependent methyltransferases 11
EF-hand Fibronectin type III 11
FAD/NAD(P)-binding domain 4Fe-4S ferredoxins 11
DNA-binding domain "Winged helix" DNA-binding domain 11
SET domain SET domain 11
PurM N-terminal domain-like Class I glutamine amidotransferase-like 11
Glucocorticoid receptor-like (DNA-binding domain) WGR domain-like 11
Urease, gamma-subunit Composite domain of metallo-dependent hydrolases 11
Flavoproteins Radical SAM enzymes 11
F-box domain ApaG-like 11
Homeodomain-like Tetracyclin repressor-like, C-terminal domain 11
Nucleotidylyl transferase tRNA-binding arm 11
BRCT domain P-loop containing nucleoside triphosphate hydrolases 11
Alpha-L RNA-binding motif S-adenosyl-L-methionine-dependent methyltransferases 11
C2 domain (Calcium/lipid-binding domain, CaLB) alpha/beta-Hydrolases 11
SAM/Pointed domain Metallo-hydrolase/oxidoreductase 11
Nucleotidylyl transferase Alpha-L RNA-binding motif 11
Acyl-CoA N-acyltransferases (Nat) Bromodomain 11
DHS-like NAD/FAD-binding domain alpha/beta-Hydrolases 11
WD40 repeat-like Putative isomerase YbhE 11
Chaperone J-domain Chaperone J-domain 11
L domain-like ARM repeat 11
Radical SAM enzymes Acyl-CoA N-acyltransferases (Nat) 11
NTF2-like Probable bacterial effector-binding domain 11
FAS1 domain FAS1 domain 11
Tudor/PWWP/MBT DNA repair protein MutS, domain I 11
Sec7 domain Sec7 domain 11
WD40 repeat-like SNARE fusion complex 11
Outer arm dynein light chain 1 L domain-like 11
Nucleic acid-binding proteins "Winged helix" DNA-binding domain 11
DNA ligase/mRNA capping enzyme, catalytic domain RuvA domain 2-like 11
FAD-linked reductases, C-terminal domain 4Fe-4S ferredoxins 11
S-adenosyl-L-methionine-dependent methyltransferases Riboflavin kinase-like 11
SAP domain DNase I-like 11
DNA-glycosylase Nudix 11
Actin-like ATPase domain C-terminal domain of RNA polymerase alpha subunit 11
Retrovirus zinc finger-like domains F-box domain 11
TPR-like HMA, heavy metal-associated domain 11
Thioredoxin-like Six-hairpin glycosidases 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Nucleic acid-binding proteins 11
CCCH zinc finger S-adenosyl-L-methionine-dependent methyltransferases 11
RING/U-box alpha/beta-Hydrolases 11
Sm-like ribonucleoproteins Mechanosensitive channel protein MscS (YggB), C-terminal domain 11
ARM repeat alpha/beta-Hydrolases 11
UBA-like post-AAA+ oligomerization domain-like 11
beta-lactamase/transpeptidase-like Penicillin binding protein dimerisation domain 11
Cyclophilin-like Cyclophilin-like 11
E set domains E set domains 11
Actin-crosslinking proteins (Trans)glycosidases 11
Aquaporin-like Aquaporin-like 11
Periplasmic binding protein-like II P-loop containing nucleoside triphosphate hydrolases 11
Tubulin nucleotide-binding domain-like FAD-binding/transporter-associated domain-like 11
ARM repeat FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) 11
vWA-like SAP domain 11
SMI1/KNR4-like ApaG-like 11
Cupredoxins Cytochrome c oxidase subunit I-like 11
NagB/RpiA/CoA transferase-like RNA-binding domain, RBD 11
Mannose-binding lectins Mannose-binding lectins 11
RuvA domain 2-like BRCT domain 11
F-box domain Pectin lyase-like 11
PHP14-like PHP14-like 11
TGS-like Class II aaRS ABD-related 11
WD40 repeat-like P-loop containing nucleoside triphosphate hydrolases 11
P-loop containing nucleoside triphosphate hydrolases DNA/RNA polymerases 11
PGBD-like DnaJ/Hsp40 cysteine-rich domain 11
Hypothetical protein AF0491, middle domain beta-beta-alpha zinc fingers 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
Class II aaRS and biotin synthetases HD-domain/PDEase-like 11
alpha/beta-Hydrolases Chelatase 11
(Phosphotyrosine protein) phosphatases II Nucleic acid-binding proteins 11
Ribonuclease H-like DNA repair protein MutS, domain I 11
Beta-D-glucan exohydrolase, C-terminal domain Galactose-binding domain-like 11
Transducin (alpha subunit), insertion domain P-loop containing nucleoside triphosphate hydrolases 11
2Fe-2S ferredoxin-like 4Fe-4S ferredoxins 11
WWE domain WWE domain 11
ADC synthase alpha/beta-Hydrolases 11
Actin-like ATPase domain RBP11-like subunits of RNA polymerase 11
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphoenolpyruvate/pyruvate domain 11
Ribonuclease PH domain 2-like Concanavalin A-like lectins/glucanases 11
MoeA N-terminal region -like Molybdenum cofactor biosynthesis proteins 11
Clathrin heavy-chain terminal domain Clathrin heavy-chain terminal domain 11
"Winged helix" DNA-binding domain HRDC-like 11
FMN-dependent nitroreductase-like FMN-dependent nitroreductase-like 11
BRCT domain Lesion bypass DNA polymerase (Y-family), little finger domain 11
Carbon-nitrogen hydrolase Adenine nucleotide alpha hydrolases-like 11
P-loop containing nucleoside triphosphate hydrolases PLP-dependent transferases 11
Probable bacterial effector-binding domain Probable bacterial effector-binding domain 11
Ribonuclease H-like Retrovirus zinc finger-like domains 11
Rudiment single hybrid motif N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) 11
Glycoside hydrolase/deacetylase Six-hairpin glycosidases 11
Protein kinase-like (PK-like) (Phosphotyrosine protein) phosphatases II 11
RING/U-box Thioredoxin-like 11
FYVE/PHD zinc finger Thioredoxin-like 11
Chaperone J-domain CSL zinc finger 11
DNA primase core P-loop containing nucleoside triphosphate hydrolases 11
Ribonuclease H-like CCCH zinc finger 11
PRP4-like Functional domain of the splicing factor Prp18 11
Dihydrofolate reductase-like Thymidylate synthase/dCMP hydroxymethylase 11
ARM repeat SH3-domain 11
F-box domain F-box domain 11
UBA-like P-loop containing nucleoside triphosphate hydrolases 11
RNI-like Glutathione synthetase ATP-binding domain-like 11
WD40 repeat-like DNase I-like 11

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