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Domain combination pairs in Desulfovibrio africanus str. Walvis Bay

All pairs of domain combinations at the superfamily level are listed here.
The identification of domain pairs does not account for the possibility of non-contiguous domains. Inserted, or interlaced, domains are seen as having a simple pair ordering.

  • For a list of unique full length architectures for this genome click here (can be slow).
Adjacent domain pairs graph

Graph of adjacent domain pairs.


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Domain combination pairs

724 domain combination pairs.
Click on a column heading to sort that column, or the 'View' button to see domain architetures for that domain pair combination.

Superfamily (N) Superfamily (C) Number of occurrances Number unique
Homodimeric domain of signal transducing histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 7542
PYP-like sensor domain (PAS domain) ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 5433
PYP-like sensor domain (PAS domain) Homodimeric domain of signal transducing histidine kinase 4628
CheY-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 4230
CheY-like Homodimeric domain of signal transducing histidine kinase 4028
CheY-like PYP-like sensor domain (PAS domain) 3726
PYP-like sensor domain (PAS domain) PYP-like sensor domain (PAS domain) 3624
P-loop containing nucleoside triphosphate hydrolases Homeodomain-like 284
CheY-like P-loop containing nucleoside triphosphate hydrolases 223
P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases 2012
CheY-like Homeodomain-like 191
Multidrug resistance efflux transporter EmrE Multidrug resistance efflux transporter EmrE 132
HAMP domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 126
NAD(P)-binding Rossmann-fold domains Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 124
Homeodomain-like Tetracyclin repressor-like, C-terminal domain 111
HAMP domain-like Homodimeric domain of signal transducing histidine kinase 115
P-loop containing nucleoside triphosphate hydrolases Translation proteins 106
GAF domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 1010
Actin-like ATPase domain Actin-like ATPase domain 104
Thiamin diphosphate-binding fold (THDP-binding) TK C-terminal domain-like 106
Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain 105
CheY-like Histidine-containing phosphotransfer domain, HPT domain 99
P-loop containing nucleoside triphosphate hydrolases Ribosomal protein S5 domain 2-like 85
PYP-like sensor domain (PAS domain) GAF domain-like 88
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Histidine-containing phosphotransfer domain, HPT domain 88
PYP-like sensor domain (PAS domain) Methyl-accepting chemotaxis protein (MCP) signaling domain 85
Formate dehydrogenase/DMSO reductase, domains 1-3 ADC-like 81
Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) 85
NAD(P)-binding Rossmann-fold domains 6-phosphogluconate dehydrogenase C-terminal domain-like 82
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB transmembrane domain 73
Nucleotidylyl transferase Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 77
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 73
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB transmembrane domain 73
PYP-like sensor domain (PAS domain) Nucleotide cyclase 76
Homodimeric domain of signal transducing histidine kinase Histidine-containing phosphotransfer domain, HPT domain 77
Sensory domain-like Methyl-accepting chemotaxis protein (MCP) signaling domain 75
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 73
Calcium ATPase, transmembrane domain M HAD-like 74
Calcium ATPase, transduction domain A Calcium ATPase, transmembrane domain M 74
Calcium ATPase, transduction domain A HAD-like 74
GAF domain-like CheY-like 77
GAF domain-like Homodimeric domain of signal transducing histidine kinase 77
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 73
CheY-like CheY-like 66
Nucleotide cyclase EAL domain-like 65
ABC transporter transmembrane region P-loop containing nucleoside triphosphate hydrolases 62
Riboflavin synthase domain-like Ferredoxin reductase-like, C-terminal NADP-linked domain 62
P-loop containing nucleoside triphosphate hydrolases EF-G C-terminal domain-like 63
NAD(P)-binding Rossmann-fold domains TrkA C-terminal domain-like 65
Translation proteins EF-G C-terminal domain-like 63
Sigma2 domain of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 64
CheY-like C-terminal effector domain of the bipartite response regulators 61
Glutathione synthetase ATP-binding domain-like Phosphohistidine domain 53
Rhodanese/Cell cycle control phosphatase Rhodanese/Cell cycle control phosphatase 54
lambda repressor-like DNA-binding domains LexA/Signal peptidase 51
"Winged helix" DNA-binding domain Periplasmic binding protein-like II 51
Composite domain of metallo-dependent hydrolases Metallo-dependent hydrolases 54
PYP-like sensor domain (PAS domain) P-loop containing nucleoside triphosphate hydrolases 52
FAD/NAD(P)-binding domain 4Fe-4S ferredoxins 54
MurD-like peptide ligases, catalytic domain MurD-like peptide ligases, peptide-binding domain 54
HAMP domain-like PYP-like sensor domain (PAS domain) 53
EF-G C-terminal domain-like EF-G C-terminal domain-like 52
ACT-like ACT-like 54
CheY-like Nucleotide cyclase 55
CheY-like TPR-like 52
PreATP-grasp domain Glutathione synthetase ATP-binding domain-like 54
PurM N-terminal domain-like PurM C-terminal domain-like 52
PYP-like sensor domain (PAS domain) EAL domain-like 54
FAD-binding/transporter-associated domain-like FAD-linked oxidases, C-terminal domain 52
PYP-like sensor domain (PAS domain) Homeodomain-like 41
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 42
Metal cation-transporting ATPase, ATP-binding domain N HAD-like 41
Calcium ATPase, transduction domain A Metal cation-transporting ATPase, ATP-binding domain N 41
Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 42
CheY-like Methylesterase CheB, C-terminal domain 43
Sensory domain-like PYP-like sensor domain (PAS domain) 43
Nucleic acid-binding proteins Class II aaRS and biotin synthetases 43
Homeodomain-like Homeodomain-like 42
4Fe-4S ferredoxins Nucleotide-binding domain 44
P-loop containing nucleoside triphosphate hydrolases Class I glutamine amidotransferase-like 42
Thiolase-like Thiolase-like 41
Regulatory protein AraC Homeodomain-like 42
Nucleic acid-binding proteins Nucleic acid-binding proteins 44
N-terminal domain of alpha and beta subunits of F1 ATP synthase P-loop containing nucleoside triphosphate hydrolases 41
Sm-like ribonucleoproteins Mechanosensitive channel protein MscS (YggB), C-terminal domain 43
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 42
N-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase 41
P-loop containing nucleoside triphosphate hydrolases C-terminal domain of alpha and beta subunits of F1 ATP synthase 41
Metal cation-transporting ATPase, ATP-binding domain N Calcium ATPase, transmembrane domain M 41
PLP-binding barrel Alanine racemase C-terminal domain-like 42
FAD/NAD(P)-binding domain FAD/NAD-linked reductases, dimerisation (C-terminal) domain 42
alpha-helical ferredoxin Nucleotide-binding domain 33
Aldehyde ferredoxin oxidoreductase, N-terminal domain Aldehyde ferredoxin oxidoreductase, C-terminal domains 31
Phage tail proteins Phage tail proteins 32
PUA domain-like P-loop containing nucleoside triphosphate hydrolases 32
GroES-like NAD(P)-binding Rossmann-fold domains 31
GAF domain-like P-loop containing nucleoside triphosphate hydrolases 31
Phospholipase D/nuclease Phospholipase D/nuclease 32
PreATP-grasp domain Rudiment single hybrid motif 32
cAMP-binding domain-like "Winged helix" DNA-binding domain 31
Glutathione synthetase ATP-binding domain-like Succinyl-CoA synthetase domains 33
Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like 32
Glutathione synthetase ATP-binding domain-like NAD(P)-binding Rossmann-fold domains 33
Trypsin-like serine proteases PDZ domain-like 31
RuvA domain 2-like Nucleic acid-binding proteins 33
P-loop containing nucleoside triphosphate hydrolases HprK N-terminal domain-like 32
P-loop containing nucleoside triphosphate hydrolases "Winged helix" DNA-binding domain 33
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheW-like 33
Translation proteins EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 32
Succinyl-CoA synthetase domains NAD(P)-binding Rossmann-fold domains 33
Succinyl-CoA synthetase domains Succinyl-CoA synthetase domains 33
PDZ domain-like PDZ domain-like 31
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Ribosomal protein S5 domain 2-like 33
Translation proteins Ribosomal protein S5 domain 2-like 31
Ferritin-like Rubredoxin-like 31
(Trans)glycosidases Glycosyl hydrolase domain 33
Class II aaRS and biotin synthetases Class II aaRS ABD-related 33
4Fe-4S ferredoxins Nitrite and sulphite reductase 4Fe-4S domain-like 32
2Fe-2S ferredoxin-like CO dehydrogenase ISP C-domain like 32
Chemotaxis receptor methyltransferase CheR, N-terminal domain S-adenosyl-L-methionine-dependent methyltransferases 32
CO dehydrogenase molybdoprotein N-domain-like Molybdenum cofactor-binding domain 32
EspE N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 31
Phosphoglucomutase, first 3 domains Phosphoglucomutase, C-terminal domain 32
TPR-like TPR-like 33
Formate/glycerate dehydrogenase catalytic domain-like NAD(P)-binding Rossmann-fold domains 31
PYP-like sensor domain (PAS domain) Histidine-containing phosphotransfer domain, HPT domain 33
ValRS/IleRS/LeuRS editing domain Nucleotidylyl transferase 33
P-loop containing nucleoside triphosphate hydrolases EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 32
Double Clp-N motif P-loop containing nucleoside triphosphate hydrolases 31
Histidine-containing phosphotransfer domain, HPT domain CheW-like 33
EF-G C-terminal domain-like Ribosomal protein S5 domain 2-like 31
GAF domain-like Homeodomain-like 31
Triger factor/SurA peptide-binding domain-like FKBP-like 33
ValRS/IleRS/LeuRS editing domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 33
Adenine nucleotide alpha hydrolases-like Adenine nucleotide alpha hydrolases-like 31
E set domains (Trans)glycosidases 32
Phosphoglucomutase, first 3 domains Phosphoglucomutase, first 3 domains 32
HlyD-like secretion proteins HlyD-like secretion proteins 32
LuxS/MPP-like metallohydrolase LuxS/MPP-like metallohydrolase 32
Aminoacid dehydrogenase-like, N-terminal domain NAD(P)-binding Rossmann-fold domains 31
Alpha-L RNA-binding motif Pseudouridine synthase 32
Phosphohistidine domain Phosphoenolpyruvate/pyruvate domain 33
Glutathione synthetase ATP-binding domain-like Rudiment single hybrid motif 32
FAD-binding/transporter-associated domain-like CO dehydrogenase flavoprotein C-terminal domain-like 21
UDP-Glycosyltransferase/glycogen phosphorylase Nucleotide-diphospho-sugar transferases 22
MurE/MurF N-terminal domain MurD-like peptide ligases, catalytic domain 21
GAF domain-like Nucleotide cyclase 22
Radical SAM enzymes Nitrogenase accessory factor-like 21
Metallo-hydrolase/oxidoreductase Flavoproteins 21
CBS-domain pair FAD-binding/transporter-associated domain-like 21
MoeA N-terminal region -like Molybdenum cofactor biosynthesis proteins 22
P-loop containing nucleoside triphosphate hydrolases PLP-dependent transferases 22
Sensory domain-like HAMP domain-like 22
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Adenine nucleotide alpha hydrolases-like 21
Flavoproteins 4Fe-4S ferredoxins 21
PUA domain-like Ribosomal protein S5 domain 2-like 21
Chaperone J-domain HSP40/DnaJ peptide-binding domain 22
FAD/NAD(P)-binding domain Nucleotide-binding domain 22
CheW-like CheY-like 22
tRNA-binding arm Class II aaRS and biotin synthetases 21
HD-domain/PDEase-like Nucleotidyltransferase 22
DNA repair protein MutS, domain III P-loop containing nucleoside triphosphate hydrolases 22
Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 22
NAD(P)-binding Rossmann-fold domains UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 21
Thiamin diphosphate-binding fold (THDP-binding) Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 22
Voltage-gated potassium channels NAD(P)-binding Rossmann-fold domains 22
HD-domain/PDEase-like ACT-like 22
ThrRS/AlaRS common domain Class II aaRS and biotin synthetases 22
HAMP domain-like PP2C-like 21
EF-hand EF-hand 22
Penicillin binding protein dimerisation domain beta-lactamase/transpeptidase-like 22
GAF domain-like Histidine-containing phosphotransfer domain, HPT domain 22
Homodimeric domain of signal transducing histidine kinase CheW-like 22
6-phosphogluconate dehydrogenase C-terminal domain-like UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 21
TrkA C-terminal domain-like TrkA C-terminal domain-like 22
MurE/MurF N-terminal domain MurD-like peptide ligases, peptide-binding domain 21
Pectin lyase-like Pectin lyase-like 22
DnaK suppressor protein DksA, alpha-hairpin domain Glucocorticoid receptor-like (DNA-binding domain) 21
Mechanosensitive channel protein MscS (YggB), transmembrane region Sm-like ribonucleoproteins 22
Acyl-CoA N-acyltransferases (Nat) Acyl-CoA N-acyltransferases (Nat) 21
MoeA N-terminal region -like MoeA C-terminal domain-like 22
P-loop containing nucleoside triphosphate hydrolases FtsH protease domain-like 22
NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains 22
Mechanosensitive channel protein MscS (YggB), transmembrane region Mechanosensitive channel protein MscS (YggB), C-terminal domain 22
Cobalamin (vitamin B12)-binding domain Radical SAM enzymes 21
Nqo1 FMN-binding domain-like alpha-helical ferredoxin 21
Nicotinate/Quinolinate PRTase N-terminal domain-like Nicotinate/Quinolinate PRTase C-terminal domain-like 21
"Winged helix" DNA-binding domain S-adenosyl-L-methionine-dependent methyltransferases 22
TK C-terminal domain-like Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 22
4Fe-4S ferredoxins FMN-dependent nitroreductase-like 21
Nucleotidyltransferase Poly A polymerase C-terminal region-like 22
4Fe-4S ferredoxins P-loop containing nucleoside triphosphate hydrolases 21
4Fe-4S ferredoxins 4Fe-4S ferredoxins 22
Creatinase/prolidase N-terminal domain Creatinase/aminopeptidase 21
Metallo-hydrolase/oxidoreductase Rhodanese/Cell cycle control phosphatase 21
Pentapeptide repeat-like Pentapeptide repeat-like 22
HD-domain/PDEase-like HD-domain/PDEase-like 21
DNA ligase/mRNA capping enzyme, catalytic domain Nucleic acid-binding proteins 22
P-loop containing nucleoside triphosphate hydrolases CBS-domain pair 21
Nitrite/Sulfite reductase N-terminal domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 21
HSP40/DnaJ peptide-binding domain HSP40/DnaJ peptide-binding domain 22
PRC-barrel domain PRC-barrel domain 21
Enolase N-terminal domain-like Enolase C-terminal domain-like 21
cAMP-binding domain-like CBS-domain pair 21
Molybdenum cofactor biosynthesis proteins MoeA C-terminal domain-like 22
Nucleotidyltransferase ACT-like 22
Voltage-gated potassium channels TrkA C-terminal domain-like 22
Nucleotide-diphospho-sugar transferases Nucleotide-diphospho-sugar transferases 22
4Fe-4S ferredoxins alpha-helical ferredoxin 22
Nucleic acid-binding proteins Translation proteins SH3-like domain 22
alpha-helical ferredoxin alpha-helical ferredoxin 22
UDP-Glycosyltransferase/glycogen phosphorylase S-adenosyl-L-methionine-dependent methyltransferases 22
Cupredoxins Cupredoxins 22
P-loop containing nucleoside triphosphate hydrolases MOP-like 21
Cytochrome c Cytochrome c 22
P-loop containing nucleoside triphosphate hydrolases post-AAA+ oligomerization domain-like 21
P-loop containing nucleoside triphosphate hydrolases TrpR-like 21
Glutathione synthetase ATP-binding domain-like Phosphoenolpyruvate/pyruvate domain 22
PYP-like sensor domain (PAS domain) PP2C-like 22
lambda repressor-like DNA-binding domains RmlC-like cupins 21
Nitrite/Sulfite reductase N-terminal domain-like 4Fe-4S ferredoxins 21
Aldolase 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 21
DNA/RNA polymerases Lesion bypass DNA polymerase (Y-family), little finger domain 21
PUA domain-like Nucleotidylyl transferase 22
HAMP domain-like Methyl-accepting chemotaxis protein (MCP) signaling domain 22
Thiamin diphosphate-binding fold (THDP-binding) DHS-like NAD/FAD-binding domain 21
Globin-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
L,D-transpeptidase catalytic domain-like NTF2-like 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases Nucleic acid-binding proteins 11
all-alpha NTP pyrophosphatases all-alpha NTP pyrophosphatases 11
Aspartate/glutamate racemase Aspartate/glutamate racemase 11
NAD(P)-binding Rossmann-fold domains Bet v1-like 11
Dihydropteroate synthetase-like Cobalamin (vitamin B12)-binding domain 11
Nucleotide cyclase TPR-like 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Type II DNA topoisomerase 11
ARM repeat ARM repeat 11
TK C-terminal domain-like 4Fe-4S ferredoxins 11
NAD(P)-binding Rossmann-fold domains Siroheme synthase middle domains-like 11
PK beta-barrel domain-like PK C-terminal domain-like 11
PreATP-grasp domain PreATP-grasp domain 11
Transcription factor NusA, N-terminal domain Prokaryotic type KH domain (KH-domain type II) 11
"Winged helix" DNA-binding domain "Winged helix" DNA-binding domain 11
Glutathione synthetase ATP-binding domain-like Carbamoyl phosphate synthetase, large subunit connection domain 11
Zinc beta-ribbon DNA primase core 11
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 Nucleic acid-binding proteins 11
Adenine nucleotide alpha hydrolases-like Argininosuccinate synthetase, C-terminal domain 11
Class II aaRS and biotin synthetases Anticodon-binding domain of PheRS 11
NagB/RpiA/CoA transferase-like D-ribose-5-phosphate isomerase (RpiA), lid domain 11
Glutamine synthetase, N-terminal domain Glutamine synthetase/guanido kinase 11
PheT/TilS domain Putative DNA-binding domain 11
P-loop containing nucleoside triphosphate hydrolases CarD-like 11
Tetrapyrrole methylase HemD-like 11
Periplasmic binding protein-like II Lysozyme-like 11
post-HMGL domain-like Single hybrid motif 11
Epsilon subunit of F1F0-ATP synthase N-terminal domain Epsilon subunit of F1F0-ATP synthase C-terminal domain 11
Tex N-terminal region-like Nucleic acid-binding proteins 11
CBS-domain pair Nucleotide cyclase 11
(Trans)glycosidases Protein kinase-like (PK-like) 11
Sensory domain-like Nucleotide cyclase 11
Molybdenum cofactor biosynthesis proteins Periplasmic binding protein-like II 11
SufE/NifU Fe-S cluster assembly (FSCA) domain-like 11
GAF domain-like GAF domain-like 11
Acetyl-CoA synthetase-like Glycerol-3-phosphate (1)-acyltransferase 11
Dihydropteroate synthetase-like Methionine synthase domain 11
NAD(P)-binding Rossmann-fold domains LDH C-terminal domain-like 11
Ribonuclease PH domain 2-like Nucleic acid-binding proteins 11
MFS general substrate transporter S-adenosyl-L-methionine-dependent methyltransferases 11
CO dehydrogenase ISP C-domain like Molybdenum cofactor-binding domain 11
"Winged helix" DNA-binding domain GAF domain-like 11
Eukaryotic type KH-domain (KH-domain type I) HD-domain/PDEase-like 11
S-adenosyl-L-methionine-dependent methyltransferases Homodimeric domain of signal transducing histidine kinase 11
Cation efflux protein transmembrane domain-like Cation efflux protein cytoplasmic domain-like 11
Tryptophan synthase beta subunit-like PLP-dependent enzymes Nucleotidylyl transferase 11
P-loop containing nucleoside triphosphate hydrolases SMR domain-like 11
EspE N-terminal domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Metalloproteases ("zincins"), catalytic domain DPP6 N-terminal domain-like 11
NAD(P)-binding Rossmann-fold domains MurD-like peptide ligases, catalytic domain 11
Ribosomal protein S5 domain 2-like Ribonuclease PH domain 2-like 11
YbaK/ProRS associated domain Class II aaRS ABD-related 11
FMN-dependent nitroreductase-like FMN-dependent nitroreductase-like 11
Ribosomal L11/L12e N-terminal domain Ribosomal protein L11, C-terminal domain 11
PIN domain-like DNA/RNA polymerases 11
Ribosomal protein S5 domain 2-like HSP90 C-terminal domain 11
Aldolase Sensory domain-like 11
P-loop containing nucleoside triphosphate hydrolases Nucleotide cyclase 11
PHP domain-like P-loop containing nucleoside triphosphate hydrolases 11
"Winged helix" DNA-binding domain NagB/RpiA/CoA transferase-like 11
CO dehydrogenase ISP C-domain like CO dehydrogenase molybdoprotein N-domain-like 11
ThrRS/AlaRS common domain Class II aaRS ABD-related 11
N-terminal domain of MutM-like DNA repair proteins S13-like H2TH domain 11
Formyltransferase FMT C-terminal domain-like 11
PheT/TilS domain Class II aaRS and biotin synthetases 11
L30e-like alpha/beta knot 11
Pectin lyase-like PKD domain 11
Ribosomal protein S5 domain 2-like DNA mismatch repair protein MutL 11
RuvA domain 2-like DNA helicase RuvA subunit, C-terminal domain 11
PIN domain-like P-loop containing nucleoside triphosphate hydrolases 11
Nucleotidylyl transferase Riboflavin kinase-like 11
MurCD N-terminal domain MurD-like peptide ligases, catalytic domain 11
Ada DNA repair protein, N-terminal domain (N-Ada 10) Homeodomain-like 11
Heme-dependent peroxidases Heme-dependent peroxidases 11
Methylesterase CheB, C-terminal domain ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Class I glutamine amidotransferase-like Adenine nucleotide alpha hydrolases-like 11
P-loop containing nucleoside triphosphate hydrolases Ribonuclease H-like 11
FAD-linked oxidases, C-terminal domain alpha-helical ferredoxin 11
LysM domain LysM domain 11
N-terminal domain of MutM-like DNA repair proteins Glucocorticoid receptor-like (DNA-binding domain) 11
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 Eukaryotic type KH-domain (KH-domain type I) 11
L9 N-domain-like Ribosomal protein L9 C-domain 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) FMN-linked oxidoreductases 11
2Fe-2S ferredoxin-like Molybdenum cofactor-binding domain 11
S-adenosyl-L-methionine-dependent methyltransferases Putative methyltransferase TM0872, insert domain 11
2Fe-2S ferredoxin-like CO dehydrogenase molybdoprotein N-domain-like 11
NTF2-like Sec-C motif 11
Succinyl-CoA synthetase domains Acyl-CoA N-acyltransferases (Nat) 11
CBS-domain pair Nucleotidyltransferase 11
FliG FliG 11
ACT-like Formyltransferase 11
DHH phosphoesterases CBS-domain pair 11
CBS-domain pair CBS-domain pair 11
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphoenolpyruvate/pyruvate domain 11
TGS-like ACT-like 11
GroEL-intermediate domain like GroEL apical domain-like 11
ACT-like HAD-like 11
Nucleic acid-binding proteins S-adenosyl-L-methionine-dependent methyltransferases 11
P-loop containing nucleoside triphosphate hydrolases Helical scaffold and wing domains of SecA 11
NusB-like S-adenosyl-L-methionine-dependent methyltransferases 11
R1 subunit of ribonucleotide reductase, N-terminal domain PFL-like glycyl radical enzymes 11
GIY-YIG endonuclease C-terminal UvrC-binding domain of UvrB 11
RuvA domain 2-like BRCT domain 11
S-adenosyl-L-methionine-dependent methyltransferases AhpD-like 11
PK beta-barrel domain-like Phosphoenolpyruvate/pyruvate domain 11
S-adenosyl-L-methionine-dependent methyltransferases GAF domain-like 11
Trm112p-like S-adenosyl-L-methionine-dependent methyltransferases 11
Prokaryotic type KH domain (KH-domain type II) Rad51 N-terminal domain-like 11
Nucleotidylyl transferase Ribosomal protein L25-like 11
Translation proteins Initiation factor IF2/eIF5b, domain 3 11
Putative DNA-binding domain Class II aaRS and biotin synthetases 11
ClpP/crotonase NfeD domain-like 11
Leukotriene A4 hydrolase N-terminal domain Metalloproteases ("zincins"), catalytic domain 11
EAL domain-like Sensory domain-like 11
NAD(P)-binding Rossmann-fold domains ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain Alkaline phosphatase-like 11
Globin-like Homodimeric domain of signal transducing histidine kinase 11
S-adenosyl-L-methionine-dependent methyltransferases CheY-like 11
PurM C-terminal domain-like PurM C-terminal domain-like 11
NAD(P)-binding Rossmann-fold domains Acyl-CoA N-acyltransferases (Nat) 11
FwdE-like Molybdenum cofactor biosynthesis proteins 11
5' to 3' exonuclease, C-terminal subdomain DNA/RNA polymerases 11
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphohistidine domain 11
Nucleotidylyl transferase Nucleic acid-binding proteins 11
Ammonium transporter PYP-like sensor domain (PAS domain) 11
Chorismate mutase II EPT/RTPC-like 11
Nucleic acid-binding proteins beta-lactamase/transpeptidase-like 11
Cryptochrome/photolyase, N-terminal domain Cryptochrome/photolyase FAD-binding domain 11
Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 4Fe-4S ferredoxins 11
HMA, heavy metal-associated domain Calcium ATPase, transmembrane domain M 11
Diaminopimelate epimerase-like Diaminopimelate epimerase-like 11
HAD-like Six-hairpin glycosidases 11
Radical SAM enzymes Radical SAM enzymes 11
RuvA domain 2-like RuvA domain 2-like 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) SIS domain 11
ACT-like 4Fe-4S ferredoxins 11
PilZ domain-like Histidine-containing phosphotransfer domain, HPT domain 11
Lysozyme-like beta-lactamase/transpeptidase-like 11
CorA soluble domain-like Magnesium transport protein CorA, transmembrane region 11
Chemotaxis receptor methyltransferase CheR, N-terminal domain CheY-like 11
Nucleotide-binding domain Nucleotide-binding domain 11
Glucocorticoid receptor-like (DNA-binding domain) P-loop containing nucleoside triphosphate hydrolases 11
Homodimeric domain of signal transducing histidine kinase Nucleotide cyclase 11
Alpha-L RNA-binding motif P-loop containing nucleoside triphosphate hydrolases 11
Tryptophan synthase beta subunit-like PLP-dependent enzymes Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
FAD/NAD-linked reductases, dimerisation (C-terminal) domain Rhodanese/Cell cycle control phosphatase 11
Nucleotide-diphospho-sugar transferases Trimeric LpxA-like enzymes 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Nucleotidylyl transferase 11
Translation proteins Translation proteins 11
Glutathione synthetase ATP-binding domain-like Methylglyoxal synthase-like 11
MgtE N-terminal domain-like MgtE membrane domain-like 11
Periplasmic binding protein-like II ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
RNase III domain-like dsRNA-binding domain-like 11
Zn-dependent exopeptidases Bacterial exopeptidase dimerisation domain 11
Thioredoxin-like Six-hairpin glycosidases 11
Nucleotide-diphospho-sugar transferases S-adenosyl-L-methionine-dependent methyltransferases 11
Acylphosphatase/BLUF domain-like YrdC/RibB 11
CheY-like FAD/NAD(P)-binding domain 11
"Winged helix" DNA-binding domain PLP-dependent transferases 11
Lysozyme-like Nucleic acid-binding proteins 11
Chemotaxis receptor methyltransferase CheR, N-terminal domain Homodimeric domain of signal transducing histidine kinase 11
HprK N-terminal domain-like Isocitrate/Isopropylmalate dehydrogenase-like 11
Nucleotidylyl transferase Alpha-L RNA-binding motif 11
YajQ-like YajQ-like 11
PLP-dependent transferases Class I glutamine amidotransferase-like 11
P-loop containing nucleoside triphosphate hydrolases Restriction endonuclease-like 11
Rho N-terminal domain-like Nucleic acid-binding proteins 11
TolB, N-terminal domain Tricorn protease N-terminal domain 11
PUA domain-like alpha/beta knot 11
Methyl-accepting chemotaxis protein (MCP) signaling domain Methyl-accepting chemotaxis protein (MCP) signaling domain 11
Methyl-accepting chemotaxis protein (MCP) signaling domain Hemerythrin-like 11
DNA repair protein MutS, domain III SMR domain-like 11
YVTN repeat-like/Quinoprotein amine dehydrogenase DPP6 N-terminal domain-like 11
PUA domain-like S-adenosyl-L-methionine-dependent methyltransferases 11
CBS-domain pair Inosine monophosphate dehydrogenase (IMPDH) 11
Homeodomain-like Methylated DNA-protein cysteine methyltransferase domain 11
FAD-binding/transporter-associated domain-like Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain 11
NAD(P)-binding Rossmann-fold domains MurD-like peptide ligases, peptide-binding domain 11
Nucleotidylyl transferase P-loop containing nucleoside triphosphate hydrolases 11
N-utilization substance G protein NusG, N-terminal domain Translation proteins SH3-like domain 11
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 11
Zinc beta-ribbon Zinc beta-ribbon 11
Nucleotidyltransferase substrate binding subunit/domain HD-domain/PDEase-like 11
Clc chloride channel CBS-domain pair 11
Methylesterase CheB, C-terminal domain Chemotaxis receptor methyltransferase CheR, N-terminal domain 11
HAMP domain-like CheY-like 11
Nucleotide-diphospho-sugar transferases HD-domain/PDEase-like 11
Class II aaRS and biotin synthetases YbaK/ProRS associated domain 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase DNA mismatch repair protein MutL 11
Chorismate mutase II ACT-like 11
N-terminal domain of DnaB helicase P-loop containing nucleoside triphosphate hydrolases 11
Acyl-CoA N-acyltransferases (Nat) Arginase/deacetylase 11
Class II aaRS and biotin synthetases Translation proteins 11
Staphylococcal nuclease Ada DNA repair protein, N-terminal domain (N-Ada 10) 11
S-adenosyl-L-methionine-dependent methyltransferases ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
FAD-linked oxidoreductase ALDH-like 11
PhoU-like Protein kinase-like (PK-like) 11
Alpha-L RNA-binding motif S-adenosyl-L-methionine-dependent methyltransferases 11
P-loop containing nucleoside triphosphate hydrolases RecA protein, C-terminal domain 11
Carbamate kinase-like PUA domain-like 11
Periplasmic binding protein-like II ACT-like 11
2Fe-2S ferredoxin-like alpha-helical ferredoxin 11
MgtE N-terminal domain-like CBS-domain pair 11
Aldolase Single hybrid motif 11
beta-Roll beta-Roll 11
DNA ligase/mRNA capping enzyme, catalytic domain DNA ligase/mRNA capping enzyme, catalytic domain 11
DNA ligase/mRNA capping enzyme, catalytic domain BRCT domain 11
Nucleotidylyl transferase An anticodon-binding domain of class I aminoacyl-tRNA synthetases 11
GlnB-like CBS-domain pair 11
EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain "Winged helix" DNA-binding domain 11
Ribosomal protein S5 domain 2-like Nucleic acid-binding proteins 11
Ribonuclease H-like Nucleic acid-binding proteins 11
Ribosome binding protein Y (YfiA homologue) Nucleic acid-binding proteins 11
Pseudouridine synthase P-loop containing nucleoside triphosphate hydrolases 11
Nucleic acid-binding proteins P-loop containing nucleoside triphosphate hydrolases 11
Bacterial fluorinating enzyme, N-terminal domain Bacterial fluorinating enzyme, C-terminal domain 11
HAD-like Galactose mutarotase-like 11
FAD-binding/transporter-associated domain-like alpha-helical ferredoxin 11
P-loop containing nucleoside triphosphate hydrolases TRCF domain-like 11
Nucleic acid-binding proteins Rad51 N-terminal domain-like 11
Glutathione synthetase ATP-binding domain-like Glutathione synthetase ATP-binding domain-like 11
Nucleotidylyl transferase tRNA-binding arm 11
Chaperone J-domain DnaJ/Hsp40 cysteine-rich domain 11
CheY-like Ribosomal protein S5 domain 2-like 11
Trigger factor ribosome-binding domain FKBP-like 11
Glutathione synthetase ATP-binding domain-like Aldolase 11
gp5 N-terminal domain-like Phage fibre proteins 11
DnaJ/Hsp40 cysteine-rich domain HSP40/DnaJ peptide-binding domain 11
Ada DNA repair protein, N-terminal domain (N-Ada 10) Methylated DNA-protein cysteine methyltransferase domain 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase PP2C-like 11
FAD/NAD(P)-binding domain HI0933 insert domain-like 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Alpha subunit of glutamate synthase, C-terminal domain 11
EspE N-terminal domain-like CheW-like 11
Homocysteine S-methyltransferase Dihydropteroate synthetase-like 11
Nucleic acid-binding proteins Putative DNA-binding domain 11
PKD domain PKD domain 11
S13-like H2TH domain Glucocorticoid receptor-like (DNA-binding domain) 11
PRTase-like PRTase-like 11
DPP6 N-terminal domain-like PKD domain 11
FMN-linked oxidoreductases Alpha subunit of glutamate synthase, C-terminal domain 11
GroEL equatorial domain-like GroEL apical domain-like 11
HD-domain/PDEase-like TGS-like 11
Aconitase iron-sulfur domain LeuD/IlvD-like 11
Carbamoyl phosphate synthetase, small subunit N-terminal domain Class I glutamine amidotransferase-like 11
Rudiment single hybrid motif post-HMGL domain-like 11
Sigma3 and sigma4 domains of RNA polymerase sigma factors Periplasmic binding protein-like II 11
Rho N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 11
Periplasmic binding protein-like II GlnB-like 11
Rhodanese/Cell cycle control phosphatase Ferritin-like 11
PYP-like sensor domain (PAS domain) HD-domain/PDEase-like 11
Insert subdomain of RNA polymerase alpha subunit C-terminal domain of RNA polymerase alpha subunit 11
Transcription factor NusA, N-terminal domain Nucleic acid-binding proteins 11
HD-domain/PDEase-like Homodimeric domain of signal transducing histidine kinase 11
"Winged helix" DNA-binding domain Dimeric alpha+beta barrel 11
CheY-like Nucleotide-binding domain 11
CheY-like SpoIIaa-like 11
Nucleic acid-binding proteins DNA helicase RuvA subunit, C-terminal domain 11
"Winged helix" DNA-binding domain NAD(P)-binding Rossmann-fold domains 11
Sensory domain-like Sensory domain-like 11
Chorismate mutase II Periplasmic binding protein-like II 11
Galactose mutarotase-like E set domains 11
Trigger factor ribosome-binding domain Triger factor/SurA peptide-binding domain-like 11
P-loop containing nucleoside triphosphate hydrolases Pre-protein crosslinking domain of SecA 11
Carbamate kinase-like ACT-like 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases tRNA-binding arm 11
P-loop containing nucleoside triphosphate hydrolases Isocitrate/Isopropylmalate dehydrogenase-like 11
Ribonuclease H-like HRDC-like 11
Putative DNA-binding domain mu transposase, C-terminal domain 11
(Trans)glycosidases (Trans)glycosidases 11
P-loop containing nucleoside triphosphate hydrolases TGS-like 11
Translation initiation factor IF3, N-terminal domain Translation initiation factor IF3, C-terminal domain 11
PreATP-grasp domain Single hybrid motif 11
MFS general substrate transporter ApbE-like 11
Nucleotide-diphospho-sugar transferases IpsF-like 11
Fe,Mn superoxide dismutase (SOD), N-terminal domain Fe,Mn superoxide dismutase (SOD), C-terminal domain 11
GroEL equatorial domain-like GroEL-intermediate domain like 11
Glutamyl tRNA-reductase catalytic, N-terminal domain Glutamyl tRNA-reductase dimerization domain 11
Adenine nucleotide alpha hydrolases-like GMP synthetase C-terminal dimerisation domain 11
E set domains Glycosyl hydrolase domain 11
alpha-helical ferredoxin Respiratory nitrate reductase 1 gamma chain 11
Nucleic acid-binding proteins Prokaryotic type KH domain (KH-domain type II) 11
Ribosomal protein S5 domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
NAD(P)-binding Rossmann-fold domains 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
Transcription factor NusA, N-terminal domain Rad51 N-terminal domain-like 11
MurCD N-terminal domain MurD-like peptide ligases, peptide-binding domain 11
PreATP-grasp domain post-HMGL domain-like 11
NAD(P)-binding Rossmann-fold domains ACT-like 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) PRTase-like 11
DNA clamp DNA clamp 11
EreA/ChaN-like PDZ domain-like 11
beta-lactamase/transpeptidase-like Penicillin-binding protein 2x (pbp-2x), c-terminal domain 11
Nucleotidyltransferase substrate binding subunit/domain ACT-like 11
Coiled-coil domain of nucleotide exchange factor GrpE Head domain of nucleotide exchange factor GrpE 11
P-loop containing nucleoside triphosphate hydrolases TPR-like 11
S-adenosyl-L-methionine-dependent methyltransferases PYP-like sensor domain (PAS domain) 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain III 11
DNA-glycosylase Nudix 11
Receptor-binding domain of short tail fibre protein gp12 TNF-like 11
alpha-helical ferredoxin FAD/NAD(P)-binding domain 11
GreA transcript cleavage protein, N-terminal domain FKBP-like 11
SirA-like DsrEFH-like 11
PheT/TilS domain Anticodon-binding domain of PheRS 11
Methylesterase CheB, C-terminal domain Homodimeric domain of signal transducing histidine kinase 11
Phage tail proteins Phage fibre proteins 11
FabD/lysophospholipase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 11
Ammonium transporter Nucleotide cyclase 11
Ribonuclease H-like mu transposase, C-terminal domain 11
Nucleotide-diphospho-sugar transferases RmlC-like cupins 11
Prokaryotic type I DNA topoisomerase Zinc beta-ribbon 11
DNA ligase/mRNA capping enzyme, catalytic domain RuvA domain 2-like 11
P-loop containing nucleoside triphosphate hydrolases Initiation factor IF2/eIF5b, domain 3 11
Terpenoid cyclases/Protein prenyltransferases Terpenoid cyclases/Protein prenyltransferases 11
ParB/Sulfiredoxin KorB DNA-binding domain-like 11
Penicillin binding protein dimerisation domain Penicillin-binding protein 2x (pbp-2x), c-terminal domain 11
YaeB-like AraD/HMP-PK domain-like 11
Subtilisin-like Galactose-binding domain-like 11
P-loop containing nucleoside triphosphate hydrolases C-terminal UvrC-binding domain of UvrB 11
PA domain Zn-dependent exopeptidases 11
Ribonuclease PH domain 2-like Ribonuclease PH domain 2-like 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Nucleotide cyclase 11
RBP11-like subunits of RNA polymerase C-terminal domain of RNA polymerase alpha subunit 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) Translation proteins 11
Ribonuclease PH domain 2-like Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 11
Eukaryotic type KH-domain (KH-domain type I) Nucleic acid-binding proteins 11
CBS-domain pair ACT-like 11
CheY-like HD-domain/PDEase-like 11
YhbC-like, N-terminal domain YhbC-like, C-terminal domain 11
Ferritin-like Ferritin-like 11
LigT-like HAD-like 11
Elongation factor Ts (EF-Ts), dimerisation domain Elongation factor Ts (EF-Ts), dimerisation domain 11
HMA, heavy metal-associated domain HAD-like 11
Cytidine deaminase-like Dihydrofolate reductase-like 11
Homeodomain-like Probable bacterial effector-binding domain 11
Aldolase AFP III-like domain 11
Folate-binding domain Aminomethyltransferase beta-barrel domain 11
Aldolase post-HMGL domain-like 11
Methylesterase CheB, C-terminal domain GAF domain-like 11
Nucleic acid-binding proteins ArfGap/RecO-like zinc finger 11
Sensory domain-like Homodimeric domain of signal transducing histidine kinase 11
NagB/RpiA/CoA transferase-like alpha-helical ferredoxin 11
Tex N-terminal region-like Ribonuclease H-like 11
4Fe-4S ferredoxins FMN-linked oxidoreductases 11
Aminopeptidase/glucanase lid domain Zn-dependent exopeptidases 11
NAD(P)-binding Rossmann-fold domains PYP-like sensor domain (PAS domain) 11
DNA topoisomerase I domain DNA breaking-rejoining enzymes 11
Nucleotidyltransferase TGS-like 11
Chemotaxis receptor methyltransferase CheR, N-terminal domain ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Ribosomal protein L6 Ribosomal protein L6 11
Ribbon-helix-helix ACT-like 11
MOP-like MOP-like 11
Glutamine synthetase/guanido kinase GatB/YqeY motif 11
PurM N-terminal domain-like PurM N-terminal domain-like 11
NTF2-like NTF2-like 11
PreATP-grasp domain Aldolase 11
DHH phosphoesterases Nucleotidyltransferase 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
Acetyl-CoA synthetase-like ACP-like 11
Nucleic acid-binding proteins BRCT domain 11
UbiD C-terminal domain-like UbiD C-terminal domain-like 11
Type II DNA topoisomerase GyrA/ParC C-terminal domain-like 11
Putative DNA-binding domain Anticodon-binding domain of PheRS 11
FAD/NAD(P)-binding domain Rhodanese/Cell cycle control phosphatase 11
DNA repair protein MutS, domain II P-loop containing nucleoside triphosphate hydrolases 11
TPR-like OmpA-like 11
Class I glutamine amidotransferase-like GMP synthetase C-terminal dimerisation domain 11
cAMP-binding domain-like FliG 11
S-adenosyl-L-methionine-dependent methyltransferases TPR-like 11
DHH phosphoesterases Poly A polymerase C-terminal region-like 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase HSP90 C-terminal domain 11
MoeA N-terminal region -like Periplasmic binding protein-like II 11
IlvD/EDD N-terminal domain-like LeuD/IlvD-like 11
C-terminal UvrC-binding domain of UvrB RuvA domain 2-like 11
Carbamoyl phosphate synthetase, large subunit connection domain Methylglyoxal synthase-like 11
NAD(P)-binding Rossmann-fold domains Homodimeric domain of signal transducing histidine kinase 11
Thiamin diphosphate-binding fold (THDP-binding) 4Fe-4S ferredoxins 11
CarD-like TRCF domain-like 11
Tubulin nucleotide-binding domain-like Tubulin C-terminal domain-like 11
Homocysteine S-methyltransferase Cobalamin (vitamin B12)-binding domain 11
DNA repair protein MutS, domain II DNA repair protein MutS, domain III 11
Ribosomal protein S5 domain 2-like Type II DNA topoisomerase 11
Ada DNA repair protein, N-terminal domain (N-Ada 10) Methylated DNA-protein cysteine methyltransferase, C-terminal domain 11
PHP domain-like UDP-Glycosyltransferase/glycogen phosphorylase 11
GAF domain-like HD-domain/PDEase-like 11
CBS-domain pair MgtE membrane domain-like 11
Riboflavin synthase domain-like Riboflavin synthase domain-like 11
Translation proteins "Winged helix" DNA-binding domain 11
CBS-domain pair Poly A polymerase C-terminal region-like 11
Glutathione synthetase ATP-binding domain-like Single hybrid motif 11
Aspartate receptor, ligand-binding domain Methyl-accepting chemotaxis protein (MCP) signaling domain 11
Methylesterase CheB, C-terminal domain S-adenosyl-L-methionine-dependent methyltransferases 11
Ribosomal protein S5 domain 2-like Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 11
Phage tail proteins gp5 N-terminal domain-like 11
YrdC/RibB RibA-like 11
Periplasmic binding protein-like II Homodimeric domain of signal transducing histidine kinase 11
Translation proteins ThrRS/AlaRS common domain 11
Methionine synthase domain Cobalamin (vitamin B12)-binding domain 11
YjeF N-terminal domain-like Ribokinase-like 11
Radical SAM enzymes RuvA domain 2-like 11
HMA, heavy metal-associated domain Calcium ATPase, transduction domain A 11
Thioredoxin-like Thioredoxin-like 11
Ribonuclease PH domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
Rudiment single hybrid motif Aldolase 11
Nucleic acid-binding proteins Anticodon-binding domain of PheRS 11
dsRNA-binding domain-like Ribosomal protein S5 domain 2-like 11
Tex N-terminal region-like RuvA domain 2-like 11
Putative DNA-binding domain Ribonuclease H-like 11
Glutathione synthetase ATP-binding domain-like Acyl-CoA N-acyltransferases (Nat) 11
Class II aaRS and biotin synthetases Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) 11
Radical SAM enzymes Sec-C motif 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain II 11
MoeA C-terminal domain-like Periplasmic binding protein-like II 11
PDZ domain-like ClpP/crotonase 11
FAD/NAD(P)-binding domain FAD-linked reductases, C-terminal domain 11
FAD/NAD(P)-binding domain ISP domain 11
PreATP-grasp domain Methylglyoxal synthase-like 11
P-loop containing nucleoside triphosphate hydrolases HRDC-like 11
Phosphoenolpyruvate/pyruvate domain PK C-terminal domain-like 11
FAD/NAD(P)-binding domain FAD/NAD(P)-binding domain 11
Glutathione synthetase ATP-binding domain-like post-HMGL domain-like 11
DNA breaking-rejoining enzymes MOP-like 11
Histidine-containing phosphotransfer domain, HPT domain Histidine-containing phosphotransfer domain, HPT domain 11
Periplasmic binding protein-like II Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain 11
Ribosomal protein L7/12, oligomerisation (N-terminal) domain ClpS-like 11
Obg GTP-binding protein N-terminal domain P-loop containing nucleoside triphosphate hydrolases 11
GIY-YIG endonuclease RuvA domain 2-like 11
Actin-like ATPase domain Heat shock protein 70kD (HSP70), peptide-binding domain 11
Thioredoxin-like FAD/NAD(P)-binding domain 11
Domain of the SRP/SRP receptor G-proteins P-loop containing nucleoside triphosphate hydrolases 11
Ammonium transporter EAL domain-like 11
Glycerol-3-phosphate (1)-acyltransferase Acyl-CoA N-acyltransferases (Nat) 11
Glycosyl hydrolase domain Protein kinase-like (PK-like) 11
Receptor-binding domain of short tail fibre protein gp12 Receptor-binding domain of short tail fibre protein gp12 11
CheC-like Surface presentation of antigens (SPOA) 11
Translation proteins PRC-barrel domain 11
Nucleic acid-binding proteins PheT/TilS domain 11
PreATP-grasp domain Carbamoyl phosphate synthetase, large subunit connection domain 11
Class II aaRS and biotin synthetases GAD domain-like 11
P-loop containing nucleoside triphosphate hydrolases Signal peptide-binding domain 11
DNA methylase specificity domain DNA methylase specificity domain 11
WD40 repeat-like PKD domain 11
YVTN repeat-like/Quinoprotein amine dehydrogenase PKD domain 11
Prokaryotic type KH domain (KH-domain type II) Ribosomal protein S3 C-terminal domain 11
HRDC-like HRDC-like 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) ThrRS/AlaRS common domain 11
Methylesterase CheB, C-terminal domain PYP-like sensor domain (PAS domain) 11
alpha/beta-Hydrolases Galactose-binding domain-like 11
Pre-protein crosslinking domain of SecA Helical scaffold and wing domains of SecA 11
Methylated DNA-protein cysteine methyltransferase domain Methylated DNA-protein cysteine methyltransferase, C-terminal domain 11
P-loop containing nucleoside triphosphate hydrolases Prokaryotic type KH domain (KH-domain type II) 11
EAL domain-like CBS-domain pair 11
Histidine-containing phosphotransfer domain, HPT domain EspE N-terminal domain-like 11
HMA, heavy metal-associated domain HMA, heavy metal-associated domain 11
Thioesterase/thiol ester dehydrase-isomerase Thioesterase/thiol ester dehydrase-isomerase 11
Nucleic acid-binding proteins GAD domain-like 11
RuvA domain 2-like P-loop containing nucleoside triphosphate hydrolases 11
Sensory domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain ACT-like 11
Nucleotidyltransferase Nucleotidyltransferase substrate binding subunit/domain 11
GAF domain-like EAL domain-like 11
Prokaryotic type KH domain (KH-domain type II) Prokaryotic type KH domain (KH-domain type II) 11
FMN-binding split barrel UbiD C-terminal domain-like 11
Galactose mutarotase-like Six-hairpin glycosidases 11
NAD(P)-binding Rossmann-fold domains Glutamyl tRNA-reductase dimerization domain 11
CbiG N-terminal domain-like CobE/GbiG C-terminal domain-like 11
NHL repeat NHL repeat 11
Ribulose-phoshate binding barrel Nitrite and sulphite reductase 4Fe-4S domain-like 11
EspE N-terminal domain-like Homodimeric domain of signal transducing histidine kinase 11
Nudix Nudix 11
Ribonuclease H-like RuvA domain 2-like 11
Glutamyl tRNA-reductase catalytic, N-terminal domain NAD(P)-binding Rossmann-fold domains 11
GAF domain-like Rhodanese/Cell cycle control phosphatase 11
Lysozyme-like LysM domain 11
Protein kinase-like (PK-like) C-type lectin-like 11
P-loop containing nucleoside triphosphate hydrolases Phosphoglycerate mutase-like 11
UBA-like Elongation factor Ts (EF-Ts), dimerisation domain 11
ValRS/IleRS/LeuRS editing domain tRNA-binding arm 11
PIN domain-like 5' to 3' exonuclease, C-terminal subdomain 11
Homo-oligomeric flavin-containing Cys decarboxylases, HFCD CoaB-like 11
Insert subdomain of RNA polymerase alpha subunit RBP11-like subunits of RNA polymerase 11
CheY-like 4Fe-4S ferredoxins 11
Histidine-containing phosphotransfer domain, HPT domain Nucleotide cyclase 11
Sigma2 domain of RNA polymerase sigma factors Periplasmic binding protein-like II 11
MetI-like MetI-like 11
Tetrapyrrole methylase S-adenosyl-L-methionine-dependent methyltransferases 11
DNA repair protein MutS, domain I P-loop containing nucleoside triphosphate hydrolases 11
ClpP/crotonase ClpP/crotonase 11
Rudiment single hybrid motif Single hybrid motif 11
Homocysteine S-methyltransferase Methionine synthase domain 11
Methyl-accepting chemotaxis protein (MCP) signaling domain Ligand-binding domain in the NO signalling and Golgi transport 11
Barwin-like endoglucanases Sporulation related repeat 11
Chemotaxis receptor methyltransferase CheR, N-terminal domain GAF domain-like 11
ACP-like Glycerol-3-phosphate (1)-acyltransferase 11
Carbon-nitrogen hydrolase Adenine nucleotide alpha hydrolases-like 11
S-adenosylmethionine synthetase S-adenosylmethionine synthetase 11
Homeodomain-like Methylated DNA-protein cysteine methyltransferase, C-terminal domain 11
Chemotaxis receptor methyltransferase CheR, N-terminal domain PYP-like sensor domain (PAS domain) 11

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