Domain combination pairs in Hymenolepis microstoma

All pairs of domain combinations at the superfamily level are listed here.
The identification of domain pairs does not account for the possibility of non-contiguous domains. Inserted, or interlaced, domains are seen as having a simple pair ordering.

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Domain combination pairs

1500 domain combination pairs.
Click on a column heading to sort that column, or the 'View' button to see domain architetures for that domain pair combination.

Superfamily (N)	Superfamily (C)	Number of occurrances	Number unique
beta-beta-alpha zinc fingers	beta-beta-alpha zinc fingers	75	24
P-loop containing nucleoside triphosphate hydrolases	P-loop containing nucleoside triphosphate hydrolases	69	38
RNA-binding domain, RBD	RNA-binding domain, RBD	45	24
Immunoglobulin	Immunoglobulin	40	34
Cadherin-like	Cadherin-like	38	23
Actin-like ATPase domain	Actin-like ATPase domain	30	12
EGF/Laminin	EGF/Laminin	24	21
Tubulin nucleotide-binding domain-like	Tubulin C-terminal domain-like	24	4
POZ domain	Kelch motif	24	9
ARM repeat	ARM repeat	23	14
Ribonuclease H-like	DNA/RNA polymerases	22	11
C2 domain (Calcium/lipid-binding domain, CaLB)	C2 domain (Calcium/lipid-binding domain, CaLB)	21	9
Fibronectin type III	Fibronectin type III	20	17
Second domain of FERM	PH domain-like	20	15
TPR-like	TPR-like	18	11
WD40 repeat-like	WD40 repeat-like	18	12
SH3-domain	SH2 domain	17	10
PDZ domain-like	PDZ domain-like	17	15
Glucocorticoid receptor-like (DNA-binding domain)	Glucocorticoid receptor-like (DNA-binding domain)	16	12
SH3-domain	Protein kinase-like (PK-like)	16	8
SH2 domain	Protein kinase-like (PK-like)	16	9
Immunoglobulin	Fibronectin type III	16	15
Ypt/Rab-GAP domain of gyp1p	Ypt/Rab-GAP domain of gyp1p	15	9
Ubiquitin-like	Second domain of FERM	15	11
HAD-like	Calcium ATPase, transmembrane domain M	15	6
EF-hand	EF-hand	15	9
Calcium ATPase, transduction domain A	Calcium ATPase, transmembrane domain M	15	6
Calcium ATPase, transmembrane domain M	Metal cation-transporting ATPase, ATP-binding domain N	14	5
Ubiquitin-like	PH domain-like	14	9
Calcium ATPase, transduction domain A	HAD-like	14	5
HAD-like	Metal cation-transporting ATPase, ATP-binding domain N	14	5
FYVE/PHD zinc finger	FYVE/PHD zinc finger	14	14
Calcium ATPase, transduction domain A	Metal cation-transporting ATPase, ATP-binding domain N	14	5
Protein kinase-like (PK-like)	Protein kinase-like (PK-like)	14	8
ARM repeat	Protein kinase-like (PK-like)	13	11
P-loop containing nucleoside triphosphate hydrolases	Translation proteins	13	10
Growth factor receptor domain	Growth factor receptor domain	13	13
Ubiquitin-like	Ubiquitin-like	13	7
Cyclin-like	Cyclin-like	13	8
Spectrin repeat	Spectrin repeat	12	11
Ankyrin repeat	Ankyrin repeat	12	10
Nicotinic receptor ligand binding domain-like	Neurotransmitter-gated ion-channel transmembrane pore	12	6
PH domain-like	PH domain-like	12	11
DBL homology domain (DH-domain)	PH domain-like	11	11
ABC transporter transmembrane region	P-loop containing nucleoside triphosphate hydrolases	11	8
Voltage-gated potassium channels	Voltage-gated potassium channels	11	8
RING/U-box	RING/U-box	11	9
GroEL equatorial domain-like	GroEL-intermediate domain like	10	1
Eukaryotic type KH-domain (KH-domain type I)	Eukaryotic type KH-domain (KH-domain type I)	10	8
SH3-domain	SH3-domain	10	10
GroEL equatorial domain-like	GroEL apical domain-like	10	1
Thioredoxin-like	GST C-terminal domain-like	10	3
POZ domain	Voltage-gated potassium channels	10	3
GroEL-intermediate domain like	GroEL apical domain-like	10	1
Cullin repeat-like	Cullin homology domain	10	4
Glucocorticoid receptor-like (DNA-binding domain)	Nuclear receptor ligand-binding domain	9	6
L domain-like	L domain-like	9	9
Cullin homology domain	"Winged helix" DNA-binding domain	9	4
EF-hand	DLC	9	2
Nucleic acid-binding proteins	P-loop containing nucleoside triphosphate hydrolases	9	2
MFS general substrate transporter	MFS general substrate transporter	8	5
BPTI-like	BPTI-like	8	7
Transducin (alpha subunit), insertion domain	P-loop containing nucleoside triphosphate hydrolases	8	2
Cullin repeat-like	"Winged helix" DNA-binding domain	8	3
SH3-domain	P-loop containing nucleoside triphosphate hydrolases	8	7
SH2 domain	PH domain-like	8	8
Calponin-homology domain, CH-domain	Spectrin repeat	8	7
Homeodomain-like	Homeodomain-like	8	8
Acid proteases	DNA/RNA polymerases	8	3
Voltage-gated potassium channels	cAMP-binding domain-like	8	5
Nucleotidylyl transferase	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	8	6
EGF/Laminin	Growth factor receptor domain	8	8
Concanavalin A-like lectins/glucanases	Concanavalin A-like lectins/glucanases	8	8
FYVE/PHD zinc finger	Bromodomain	7	7
NAD(P)-binding Rossmann-fold domains	6-phosphogluconate dehydrogenase C-terminal domain-like	7	4
Cysteine-rich domain	Protein kinase-like (PK-like)	7	7
Chromo domain-like	Chromo domain-like	7	5
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase	Ribosomal protein S5 domain 2-like	7	7
(Phosphotyrosine protein) phosphatases II	(Phosphotyrosine protein) phosphatases II	7	7
Nucleic acid-binding proteins	Nucleic acid-binding proteins	7	5
L domain-like	Immunoglobulin	7	2
NAD(P)-binding Rossmann-fold domains	LDH C-terminal domain-like	7	2
Nucleotidyltransferase	PAP/OAS1 substrate-binding domain	7	4
Periplasmic binding protein-like I	Periplasmic binding protein-like II	7	6
cAMP-binding domain-like	cAMP-binding domain-like	7	6
lambda repressor-like DNA-binding domains	Homeodomain-like	7	4
BRCT domain	BRCT domain	6	6
HSP40/DnaJ peptide-binding domain	HSP40/DnaJ peptide-binding domain	6	5
Immunoglobulin	Protein kinase-like (PK-like)	6	5
EGF/Laminin	TSP-1 type 1 repeat	6	4
Thioredoxin-like	Thioredoxin-like	6	5
Cysteine proteinases	Calpain large subunit, middle domain (domain III)	6	5
FYVE/PHD zinc finger	RING/U-box	6	6
Fibronectin type III	(Phosphotyrosine protein) phosphatases II	6	6
PDZ domain-like	P-loop containing nucleoside triphosphate hydrolases	6	6
TSP-1 type 1 repeat	TSP-1 type 1 repeat	6	6
Voltage-gated potassium channels	Periplasmic binding protein-like II	6	5
PDZ domain-like	SH3-domain	6	6
F-box domain	WD40 repeat-like	6	5
ABC transporter transmembrane region	ABC transporter transmembrane region	6	5
DNA repair protein MutS, domain III	P-loop containing nucleoside triphosphate hydrolases	6	4
C2 domain (Calcium/lipid-binding domain, CaLB)	Protein kinase-like (PK-like)	6	6
LDL receptor-like module	LDL receptor-like module	6	6
C-type lectin-like	C-type lectin-like	6	3
BAR/IMD domain-like	SH3-domain	6	4
Leukotriene A4 hydrolase N-terminal domain	Metalloproteases ("zincins"), catalytic domain	6	3
LuxS/MPP-like metallohydrolase	LuxS/MPP-like metallohydrolase	6	3
PK beta-barrel domain-like	Phosphoenolpyruvate/pyruvate domain	6	3
Protein kinase-like (PK-like)	PH domain-like	5	5
"Winged helix" DNA-binding domain	"Winged helix" DNA-binding domain	5	4
L domain-like	Protein kinase-like (PK-like)	5	5
Periplasmic binding protein-like I	Voltage-gated potassium channels	5	4
SAM/Pointed domain	SAM/Pointed domain	5	5
PH domain-like	SH3-domain	5	5
Chaperone J-domain	HSP40/DnaJ peptide-binding domain	5	4
P-loop containing nucleoside triphosphate hydrolases	EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain	5	3
Actin-like ATPase domain	Heat shock protein 70kD (HSP70), C-terminal subdomain	5	3
P-loop containing nucleoside triphosphate hydrolases	WD40 repeat-like	5	5
CRAL/TRIO N-terminal domain	CRAL/TRIO domain	5	4
Cysteine-rich domain	Cysteine-rich domain	5	5
PK beta-barrel domain-like	PK C-terminal domain-like	5	2
Fibronectin type III	Protein kinase-like (PK-like)	5	5
L domain-like	Growth factor receptor domain	5	5
Spectrin repeat	EF-hand	5	4
Aminoacid dehydrogenase-like, N-terminal domain	NAD(P)-binding Rossmann-fold domains	5	2
Metalloproteases ("zincins"), catalytic domain	Blood coagulation inhibitor (disintegrin)	5	2
Formate/glycerate dehydrogenase catalytic domain-like	NAD(P)-binding Rossmann-fold domains	5	3
P-loop containing nucleoside triphosphate hydrolases	Ribosomal protein S5 domain 2-like	5	4
P-loop containing nucleoside triphosphate hydrolases	EF-G C-terminal domain-like	5	4
EF-G C-terminal domain-like	EF-G C-terminal domain-like	5	4
P-loop containing nucleoside triphosphate hydrolases	post-AAA+ oligomerization domain-like	5	2
Phospholipase D/nuclease	Phospholipase D/nuclease	5	4
ValRS/IleRS/LeuRS editing domain	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	5	3
Ankyrin repeat	Protein kinase-like (PK-like)	5	5
Actin-like ATPase domain	Heat shock protein 70kD (HSP70), peptide-binding domain	5	3
ARM repeat	WD40 repeat-like	5	5
Glucocorticoid receptor-like (DNA-binding domain)	Homeodomain-like	5	4
Phosphoenolpyruvate/pyruvate domain	PK C-terminal domain-like	5	2
E set domains	E set domains	5	5
Bromodomain	Bromodomain	5	4
Translation proteins	EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain	5	3
Growth factor receptor domain	Protein kinase-like (PK-like)	5	5
TPR-like	SET domain	5	3
ValRS/IleRS/LeuRS editing domain	Nucleotidylyl transferase	5	3
Spectrin repeat	PH domain-like	5	5
Ankyrin repeat	P-loop containing nucleoside triphosphate hydrolases	5	5
SH2 domain	SH2 domain	5	4
Translation proteins	EF-G C-terminal domain-like	5	4
Zn-finger domain of Sec23/24	vWA-like	4	3
vWA-like	beta-sandwich domain of Sec23/24	4	3
NAD(P)-binding Rossmann-fold domains	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain	4	2
Ribosomal protein S5 domain 2-like	GHMP Kinase, C-terminal domain	4	3
Cysteine proteinases	EF-hand	4	3
Protein kinase-like (PK-like)	P-loop containing nucleoside triphosphate hydrolases	4	4
DNA ligase/mRNA capping enzyme, catalytic domain	Nucleic acid-binding proteins	4	4
Kelch motif	Kelch motif	4	3
(Trans)glycosidases	Glycosyl hydrolase domain	4	4
EF-G C-terminal domain-like	Ribosomal protein S5 domain 2-like	4	3
FAD/NAD(P)-binding domain	FAD-linked reductases, C-terminal domain	4	4
Glutathione synthetase ATP-binding domain-like	Succinyl-CoA synthetase domains	4	2
F-box domain	RNI-like	4	3
C2 domain (Calcium/lipid-binding domain, CaLB)	Cysteine-rich domain	4	3
Myosin rod fragments	Myosin rod fragments	4	4
Protein kinase-like (PK-like)	KA1-like	4	3
Heat shock protein 70kD (HSP70), peptide-binding domain	Heat shock protein 70kD (HSP70), C-terminal subdomain	4	2
Calponin-homology domain, CH-domain	PH domain-like	4	4
TAZ domain	Kix domain of CBP (creb binding protein)	4	3
ENTH/VHS domain	GAT-like domain	4	4
Concanavalin A-like lectins/glucanases	PH domain-like	4	4
P-loop containing nucleoside triphosphate hydrolases	Sec63 N-terminal domain-like	4	4
Zn-finger domain of Sec23/24	beta-sandwich domain of Sec23/24	4	3
FYVE/PHD zinc finger	P-loop containing nucleoside triphosphate hydrolases	4	4
PIN domain-like	5' to 3' exonuclease, C-terminal subdomain	4	4
SNARE-like	Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor	4	2
BEACH domain	WD40 repeat-like	4	4
Concanavalin A-like lectins/glucanases	P-domain of calnexin/calreticulin	4	2
P-loop containing nucleoside triphosphate hydrolases	Smc hinge domain	4	3
Ribosomal protein S5 domain 2-like	HSP90 C-terminal domain	4	4
Integrin alpha N-terminal domain	Integrin domains	4	3
CBS-domain pair	CBS-domain pair	4	3
Ubiquitin-like	Protein kinase-like (PK-like)	4	4
DNA/RNA polymerases	Lesion bypass DNA polymerase (Y-family), little finger domain	4	2
HSP20-like chaperones	HSP20-like chaperones	4	1
Protein kinase-like (PK-like)	Nucleotide cyclase	4	4
POZ domain	Skp1 dimerisation domain-like	4	2
DBL homology domain (DH-domain)	SH3-domain	4	4
HMG-box	HMG-box	4	2
Sec7 domain	PH domain-like	4	2
Class II aaRS and biotin synthetases	Class II aaRS ABD-related	4	4
EGF/Laminin	Concanavalin A-like lectins/glucanases	4	4
UBC-like	RING/U-box	4	4
PH domain-like	BEACH domain	4	4
P-loop containing nucleoside triphosphate hydrolases	"Winged helix" DNA-binding domain	4	4
Calponin-homology domain, CH-domain	EF-hand	4	3
Subtilisin-like	Galactose-binding domain-like	4	3
Domain of poly(ADP-ribose) polymerase	ADP-ribosylation	4	4
RING/U-box	B-box zinc-binding domain	4	4
SMAD MH1 domain	SMAD/FHA domain	4	3
Translation proteins	Ribosomal protein S5 domain 2-like	4	3
WW domain	WW domain	4	4
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase	HSP90 C-terminal domain	4	4
GroES-like	NAD(P)-binding Rossmann-fold domains	4	3
WD40 repeat-like	RING/U-box	4	4
Riboflavin synthase domain-like	Ferredoxin reductase-like, C-terminal NADP-linked domain	4	4
Chromo domain-like	P-loop containing nucleoside triphosphate hydrolases	4	4
Calponin-homology domain, CH-domain	GAS2 domain-like	3	3
Ribonuclease H-like	Ribonuclease H-like	3	3
Intermediate filament protein, coiled coil region	Lamin A/C globular tail domain	3	2
Thioredoxin-like	Ubiquitin-like	3	2
FYVE/PHD zinc finger	Tudor/PWWP/MBT	3	3
ArfGap/RecO-like zinc finger	PH domain-like	3	3
Clc chloride channel	CBS-domain pair	3	2
Bromodomain	RING/U-box	3	3
Actin depolymerizing proteins	Actin depolymerizing proteins	3	3
Cysteine proteinases	Cysteine proteinases	3	3
Tropomyosin	Tropomyosin	3	2
Toll/Interleukin receptor TIR domain	SAM/Pointed domain	3	3
Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain	Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain	3	3
CCCH zinc finger	CCCH zinc finger	3	3
Phosphoglucomutase, first 3 domains	Phosphoglucomutase, first 3 domains	3	3
6-phosphogluconate dehydrogenase C-terminal domain-like	UDP-glucose/GDP-mannose dehydrogenase C-terminal domain	3	3
DPP6 N-terminal domain-like	alpha/beta-Hydrolases	3	3
N-terminal domain of alpha and beta subunits of F1 ATP synthase	P-loop containing nucleoside triphosphate hydrolases	3	2
Ankyrin repeat	DEATH domain	3	3
RCC1/BLIP-II	Hect, E3 ligase catalytic domain	3	2
Calpain large subunit, middle domain (domain III)	EF-hand	3	2
TAZ domain	Bromodomain	3	3
P-loop containing nucleoside triphosphate hydrolases	EF-hand	3	3
PAZ domain	Ribonuclease H-like	3	2
Cysteine-rich domain	GTPase activation domain, GAP	3	3
P-loop containing nucleoside triphosphate hydrolases	C-terminal domain of alpha and beta subunits of F1 ATP synthase	3	2
TPR-like	HCP-like	3	3
HLH, helix-loop-helix DNA-binding domain	PYP-like sensor domain (PAS domain)	3	3
Metallo-dependent hydrolases	Composite domain of metallo-dependent hydrolases	3	3
Nucleotide-diphospho-sugar transferases	Ricin B-like lectins	3	1
RNase III domain-like	RNase III domain-like	3	2
PH domain-like	WD40 repeat-like	3	3
RING/U-box	Cysteine proteinases	3	3
GTPase activation domain, GAP	SH2 domain	3	3
Thiolase-like	Thiolase-like	3	2
Nucleic acid-binding proteins	Translation proteins SH3-like domain	3	3
Helical domain of Sec23/24	C-terminal, gelsolin-like domain of Sec23/24	3	2
vWA-like	Helical domain of Sec23/24	3	2
PreATP-grasp domain	Glutathione synthetase ATP-binding domain-like	3	3
P-loop containing nucleoside triphosphate hydrolases	FtsH protease domain-like	3	1
FKBP-like	TPR-like	3	2
Ribosomal protein S5 domain 2-like	Ribonuclease PH domain 2-like	3	2
ARID-like	Clavaminate synthase-like	3	2
cAMP-binding domain-like	Protein kinase-like (PK-like)	3	2
RING/U-box	P-loop containing nucleoside triphosphate hydrolases	3	3
FYVE/PHD zinc finger	Clavaminate synthase-like	3	2
Protein kinase-like (PK-like)	WD40 repeat-like	3	3
Insert subdomain of RNA polymerase alpha subunit	RBP11-like subunits of RNA polymerase	3	2
Creatinase/aminopeptidase	"Winged helix" DNA-binding domain	3	2
Ankyrin repeat	PDZ domain-like	3	1
RING/U-box	TRAF domain-like	3	3
Multidrug efflux transporter AcrB transmembrane domain	Multidrug efflux transporter AcrB transmembrane domain	3	3
DLC	DLC	3	2
Intermediate filament protein, coiled coil region	Intermediate filament protein, coiled coil region	3	2
N-terminal domain of alpha and beta subunits of F1 ATP synthase	C-terminal domain of alpha and beta subunits of F1 ATP synthase	3	2
beta-sandwich domain of Sec23/24	Helical domain of Sec23/24	3	2
Myosin rod fragments	Tropomyosin	3	3
PriA/YqbF domain	GINS helical bundle-like	3	2
ARM repeat	Toll/Interleukin receptor TIR domain	3	3
Zn-finger domain of Sec23/24	C-terminal, gelsolin-like domain of Sec23/24	3	2
EF-hand	RING/U-box	3	3
Immunoglobulin	LDL receptor-like module	3	3
Growth factor receptor domain	Fibronectin type III	3	3
FYVE/PHD zinc finger	SET domain	3	3
vWA-like	C-terminal, gelsolin-like domain of Sec23/24	3	2
ThrRS/AlaRS common domain	Class II aaRS and biotin synthetases	3	2
L27 domain	PDZ domain-like	3	3
TATA-box binding protein-like	TATA-box binding protein-like	3	3
TAZ domain	TAZ domain	3	3
Spermadhesin, CUB domain	Spermadhesin, CUB domain	3	3
ARM repeat	PH domain-like	3	3
ARM repeat	Clathrin adaptor appendage domain	3	3
C2 domain (Calcium/lipid-binding domain, CaLB)	GTPase activation domain, GAP	3	2
Terpenoid cyclases/Protein prenyltransferases	Alpha-macroglobulin receptor domain	3	2
ArfGap/RecO-like zinc finger	Ankyrin repeat	3	3
P-loop containing nucleoside triphosphate hydrolases	TGS-like	3	1
TAZ domain	RING/U-box	3	3
ATP-dependent DNA ligase DNA-binding domain	Nucleic acid-binding proteins	3	3
ARID-like	FYVE/PHD zinc finger	3	2
Zn-finger domain of Sec23/24	Helical domain of Sec23/24	3	2
Enolase N-terminal domain-like	Enolase C-terminal domain-like	3	1
beta-sandwich domain of Sec23/24	C-terminal, gelsolin-like domain of Sec23/24	3	2
PDZ domain-like	PH domain-like	3	3
Galactose-binding domain-like	Growth factor receptor domain	3	2
NAD(P)-binding Rossmann-fold domains	UDP-glucose/GDP-mannose dehydrogenase C-terminal domain	3	3
FYVE/PHD zinc finger	C2 domain (Calcium/lipid-binding domain, CaLB)	3	2
Sec63 N-terminal domain-like	E set domains	3	3
P-loop containing nucleoside triphosphate hydrolases	E set domains	3	3
RNA-binding domain, RBD	PABC (PABP) domain	3	3
Phosphoglucomutase, first 3 domains	Phosphoglucomutase, C-terminal domain	3	3
ATP-dependent DNA ligase DNA-binding domain	DNA ligase/mRNA capping enzyme, catalytic domain	3	3
P-loop containing nucleoside triphosphate hydrolases	PH domain-like	3	3
CoA-dependent acyltransferases	CoA-dependent acyltransferases	3	2
dsRNA-binding domain-like	dsRNA-binding domain-like	3	3
FAS1 domain	FAS1 domain	3	3
ARM repeat	SAM/Pointed domain	3	3
Retrovirus zinc finger-like domains	Retrovirus zinc finger-like domains	3	3
SNARE fusion complex	SNARE fusion complex	3	3
PH domain-like	Oxysterol-binding protein-like	3	2
PH domain-like	EF-hand	2	2
CRAL/TRIO domain	Supernatant protein factor (SPF), C-terminal domain	2	1
CRAL/TRIO domain	GTPase activation domain, GAP	2	1
Sema domain	Plexin repeat	2	2
"Winged helix" DNA-binding domain	Protein kinase-like (PK-like)	2	2
WW domain	Hect, E3 ligase catalytic domain	2	2
DNA repair protein MutS, domain I	DNA repair protein MutS, domain II	2	1
PYP-like sensor domain (PAS domain)	Voltage-gated potassium channels	2	1
beta-N-acetylhexosaminidase-like domain	(Trans)glycosidases	2	2
Single hybrid motif	CoA-dependent acyltransferases	2	2
Kix domain of CBP (creb binding protein)	Bromodomain	2	2
Cdc48 domain 2-like	P-loop containing nucleoside triphosphate hydrolases	2	1
Families 57/38 glycoside transferase middle domain	Galactose mutarotase-like	2	2
Galactose mutarotase-like	Glycosyl hydrolase domain	2	2
SRCR-like	SRCR-like	2	2
BAR/IMD domain-like	PH domain-like	2	2
Nucleotide-diphospho-sugar transferases	Trimeric LpxA-like enzymes	2	2
BAR/IMD domain-like	GTPase activation domain, GAP	2	2
"Winged helix" DNA-binding domain	PH domain-like	2	2
E set domains	AMPKBI-like	2	1
Ubiquitin-like	UBA-like	2	2
SH2 domain	SOCS box-like	2	1
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)	ThrRS/AlaRS common domain	2	1
Glutaminase/Asparaginase	Ankyrin repeat	2	1
Retrovirus zinc finger-like domains	P-loop containing nucleoside triphosphate hydrolases	2	1
Ypt/Rab-GAP domain of gyp1p	Rhodanese/Cell cycle control phosphatase	2	2
Cyclophilin-like	RNA-binding domain, RBD	2	2
Cysteine-rich domain	SH2 domain	2	2
Concanavalin A-like lectins/glucanases	WD40 repeat-like	2	2
C2 domain (Calcium/lipid-binding domain, CaLB)	ARM repeat	2	2
Mib/herc2 domain-like	RING/U-box	2	2
Immunoglobulin	TSP-1 type 1 repeat	2	2
Tex N-terminal region-like	Ribonuclease H-like	2	2
FYVE/PHD zinc finger	HIT/MYND zinc finger-like	2	2
Mitochondrial carrier	Mitochondrial carrier	2	1
Restriction endonuclease-like	RuvA domain 2-like	2	2
SMAD/FHA domain	FYVE/PHD zinc finger	2	2
P-loop containing nucleoside triphosphate hydrolases	Bromodomain	2	2
Homeodomain-like	(Phosphotyrosine protein) phosphatases II	2	2
Arginase/deacetylase	Arginase/deacetylase	2	2
PH domain-like	Ankyrin repeat	2	2
RuvA domain 2-like	RuvA domain 2-like	2	2
AN1-like Zinc finger	AN1-like Zinc finger	2	1
Thioredoxin-like	Galactose-binding domain-like	2	2
Protein prenylyltransferase	Outer arm dynein light chain 1	2	1
Tudor/PWWP/MBT	SAM/Pointed domain	2	2
C2 domain (Calcium/lipid-binding domain, CaLB)	EGF/Laminin	2	1
Domain of the SRP/SRP receptor G-proteins	P-loop containing nucleoside triphosphate hydrolases	2	2
ARM repeat	Subdomain of clathrin and coatomer appendage domain	2	2
alpha-helical ferredoxin	FMN-linked oxidoreductases	2	2
Ubiquitin-like	C2 domain (Calcium/lipid-binding domain, CaLB)	2	2
Nucleotidylyl transferase	Nucleotidylyl transferase	2	2
alpha-helical ferredoxin	Nucleotide-binding domain	2	2
Chaperone J-domain	DnaJ/Hsp40 cysteine-rich domain	2	1
Chaperone J-domain	Homeodomain-like	2	2
Glycoside hydrolase/deacetylase	Galactose mutarotase-like	2	2
RING/U-box	RNA-binding domain, RBD	2	2
Metallo-dependent phosphatases	FYVE/PHD zinc finger	2	2
PH domain-like	FYVE/PHD zinc finger	2	2
WD40 repeat-like	POZ domain	2	2
Periplasmic binding protein-like II	Periplasmic binding protein-like II	2	2
TPR-like	Fic-like	2	1
Nicotinic receptor ligand binding domain-like	Nicotinic receptor ligand binding domain-like	2	2
Ran binding protein zinc finger-like	Ran binding protein zinc finger-like	2	2
Ras GEF	PH domain-like	2	2
Nucleotide-binding domain	FMN-linked oxidoreductases	2	2
Ubiquitin-like	BAG domain	2	1
Notch domain	Ankyrin repeat	2	2
Cysteine proteinases	Ubiquitin-like	2	2
ARM repeat	"Winged helix" DNA-binding domain	2	2
Integrin domains	Integrin domains	2	2
Second domain of FERM	A middle domain of Talin 1	2	2
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)	Translation proteins	2	1
Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)	2	2
Calponin-homology domain, CH-domain	E set domains	2	2
Zinc beta-ribbon	Cyclin-like	2	2
PDZ domain-like	"Winged helix" DNA-binding domain	2	2
Translational machinery components	L30e-like	2	2
Bet v1-like	Cysteine proteinases	2	2
WD40 repeat-like	FYVE/PHD zinc finger	2	2
EGF/Laminin	Ankyrin repeat	2	2
Bet v1-like	HAD-like	2	2
Eukaryotic type KH-domain (KH-domain type I)	Tudor/PWWP/MBT	2	1
PH domain-like	C2 domain (Calcium/lipid-binding domain, CaLB)	2	2
Tudor/PWWP/MBT	Tudor/PWWP/MBT	2	2
CCCH zinc finger	RNA-binding domain, RBD	2	2
SH3-domain	Isochorismatase-like hydrolases	2	2
Transcription factor IIA (TFIIA), alpha-helical domain	Transcription factor IIA (TFIIA), beta-barrel domain	2	1
ARM repeat	BEACH domain	2	2
RCC1/BLIP-II	Chaperone J-domain	2	1
C2 domain (Calcium/lipid-binding domain, CaLB)	Hect, E3 ligase catalytic domain	2	2
DNA repair protein MutS, domain II	P-loop containing nucleoside triphosphate hydrolases	2	1
EF-hand	Mitochondrial carrier	2	2
Translation proteins	ThrRS/AlaRS common domain	2	1
POZ domain	Galactose oxidase, central domain	2	2
P-loop containing nucleoside triphosphate hydrolases	Myosin rod fragments	2	2
Second domain of FERM	Concanavalin A-like lectins/glucanases	2	2
p53-like transcription factors	E set domains	2	2
WW domain	GTPase activation domain, GAP	2	2
RNA-binding domain, RBD	Retrovirus zinc finger-like domains	2	2
Bromodomain	Tudor/PWWP/MBT	2	2
Acid proteases	Acid proteases	2	1
Ubiquitin-like	DBL homology domain (DH-domain)	2	2
Leukotriene A4 hydrolase N-terminal domain	ARM repeat	2	1
Immunoglobulin	EGF/Laminin	2	2
PYP-like sensor domain (PAS domain)	cAMP-binding domain-like	2	1
Tex N-terminal region-like	RuvA domain 2-like	2	2
DnaJ/Hsp40 cysteine-rich domain	HSP40/DnaJ peptide-binding domain	2	1
Concanavalin A-like lectins/glucanases	P-loop containing nucleoside triphosphate hydrolases	2	2
L domain-like	Fibronectin type III	2	2
NagB/RpiA/CoA transferase-like	NagB/RpiA/CoA transferase-like	2	1
WW domain	FF domain	2	2
P-loop containing nucleoside triphosphate hydrolases	PUA domain-like	2	2
HAD-like	P-loop containing nucleoside triphosphate hydrolases	2	2
Calpain large subunit, middle domain (domain III)	Calpain large subunit, middle domain (domain III)	2	2
Ubiquitin-like	PDZ domain-like	2	2
Ankyrin repeat	HIT/MYND zinc finger-like	2	2
SAP domain	RNA-binding domain, RBD	2	1
Ubiquitin-like	P-loop containing nucleoside triphosphate hydrolases	2	2
"Winged helix" DNA-binding domain	Sec63 N-terminal domain-like	2	2
RNA-binding domain, RBD	SPOC domain-like	2	2
Nucleotidyltransferase	PAP/Archaeal CCA-adding enzyme, C-terminal domain	2	2
Glucocorticoid receptor-like (DNA-binding domain)	AN1-like Zinc finger	2	2
Ankyrin repeat	RING/U-box	2	2
Surp module (SWAP domain)	Surp module (SWAP domain)	2	2
CRAL/TRIO N-terminal domain	Supernatant protein factor (SPF), C-terminal domain	2	1
CRAL/TRIO domain	(Phosphotyrosine protein) phosphatases II	2	2
Obg GTP-binding protein N-terminal domain	P-loop containing nucleoside triphosphate hydrolases	2	2
Succinyl-CoA synthetase domains	NAD(P)-binding Rossmann-fold domains	2	2
Sec63 N-terminal domain-like	Sec63 N-terminal domain-like	2	2
Cysteine-rich domain	Ubiquitin-like	2	2
Pre-PUA domain	PUA domain-like	2	1
alpha-catenin/vinculin-like	alpha-catenin/vinculin-like	2	2
Protein kinase-like (PK-like)	Polo-box domain	2	2
"Winged helix" DNA-binding domain	SMAD/FHA domain	2	2
Ankyrin repeat	Hect, E3 ligase catalytic domain	2	2
Kix domain of CBP (creb binding protein)	RING/U-box	2	2
Nucleotidylyl transferase	P-loop containing nucleoside triphosphate hydrolases	2	2
ADC-like	Cdc48 domain 2-like	2	1
Bet v1-like	Calpain large subunit, middle domain (domain III)	2	2
FF domain	FF domain	2	2
Nucleic acid-binding proteins	Class II aaRS and biotin synthetases	2	2
Regulator of G-protein signaling, RGS	Ubiquitin-like	2	2
C2 domain (Calcium/lipid-binding domain, CaLB)	WW domain	2	2
ATP-dependent DNA ligase DNA-binding domain	BRCT domain	2	2
P-loop containing nucleoside triphosphate hydrolases	PRTase-like	2	1
PP2C-like	PP2C-like	2	2
Glycoside hydrolase/deacetylase	Families 57/38 glycoside transferase middle domain	2	2
Subtilisin-like	Growth factor receptor domain	2	1
DNA repair protein MutS, domain I	DNA repair protein MutS, domain III	2	1
PH domain-like	Moesin tail domain	2	2
Translation proteins	Initiation factor IF2/eIF5b, domain 3	2	2
RNI-like	ARM repeat	2	2
P-loop containing nucleoside triphosphate hydrolases	Tropomyosin	2	2
Second domain of FERM	DBL homology domain (DH-domain)	2	2
DUSP-like	Cysteine proteinases	2	2
Creatinase/prolidase N-terminal domain	Creatinase/aminopeptidase	2	2
RBP11-like subunits of RNA polymerase	RBP11-like subunits of RNA polymerase	2	1
Tudor/PWWP/MBT	HIV integrase-binding domain	2	1
Multidrug resistance efflux transporter EmrE	Multidrug resistance efflux transporter EmrE	2	2
Second domain of FERM	I/LWEQ domain	2	2
DNA repair protein MutS, domain I	P-loop containing nucleoside triphosphate hydrolases	2	1
P-loop containing nucleoside triphosphate hydrolases	BRK domain-like	2	2
Metalloproteases ("zincins"), catalytic domain	ARM repeat	2	1
Dimerization-anchoring domain of cAMP-dependent PK regulatory subunit	cAMP-binding domain-like	2	2
Ankyrin repeat	S-adenosyl-L-methionine-dependent methyltransferases	2	2
Bromodomain	HIT/MYND zinc finger-like	2	2
Immunoglobulin	(Phosphotyrosine protein) phosphatases II	2	2
SH3-domain	EF-hand	2	2
FAD/NAD(P)-binding domain	FAD/NAD(P)-binding domain	2	2
HAD-like	Cysteine proteinases	2	2
Cap-Gly domain	Cap-Gly domain	2	2
Ypt/Rab-GAP domain of gyp1p	RUN domain-like	2	2
Translation initiation factor 2 beta, aIF2beta, N-terminal domain	Zinc-binding domain of translation initiation factor 2 beta	2	2
EGF/Laminin	Notch domain	2	2
PH domain-like	A middle domain of Talin 1	2	2
DNA repair protein MutS, domain II	DNA repair protein MutS, domain III	2	1
Activating enzymes of the ubiquitin-like proteins	Activating enzymes of the ubiquitin-like proteins	2	2
N-terminal, heterodimerisation domain of RBP7 (RpoE)	Nucleic acid-binding proteins	2	1
Cation efflux protein transmembrane domain-like	Cation efflux protein cytoplasmic domain-like	2	2
WGR domain-like	Domain of poly(ADP-ribose) polymerase	2	2
Second domain of FERM	Moesin tail domain	2	2
SNARE-like	SNARE fusion complex	2	1
Nucleotidylyl transferase	Ribosomal protein L25-like	2	2
"Winged helix" DNA-binding domain	E set domains	2	2
TPR-like	P-loop containing nucleoside triphosphate hydrolases	2	2
dsRNA-binding domain-like	Ribosomal protein S5 domain 2-like	2	2
Cysteine proteinases	UBA-like	2	2
Cysteine-rich DNA binding domain, (DM domain)	Cysteine-rich DNA binding domain, (DM domain)	2	2
Protein kinase-like (PK-like)	PDZ domain-like	2	2
PH domain-like	GTPase activation domain, GAP	2	2
TPR-like	RING/U-box	2	2
CRAL/TRIO N-terminal domain	(Phosphotyrosine protein) phosphatases II	2	2
Chromo domain-like	Acyl-CoA N-acyltransferases (Nat)	2	2
DNA/RNA polymerases	DNA/RNA polymerases	2	2
Mib/herc2 domain-like	Mib/herc2 domain-like	2	2
Class II aaRS and biotin synthetases	Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)	2	1
SH2 domain	(Phosphotyrosine protein) phosphatases II	2	1
DNA ligase/mRNA capping enzyme, catalytic domain	BRCT domain	2	2
Ras GEF	Ras GEF	2	2
PDZ domain-like	Glucocorticoid receptor-like (DNA-binding domain)	2	1
EF-hand	WD40 repeat-like	2	2
B-box zinc-binding domain	FYVE/PHD zinc finger	2	2
WGR domain-like	ADP-ribosylation	2	2
FYVE/PHD zinc finger	Homeodomain-like	2	2
Regulator of G-protein signaling, RGS	Protein kinase-like (PK-like)	2	2
beta-beta-alpha zinc fingers	Homeodomain-like	2	2
ADC-like	P-loop containing nucleoside triphosphate hydrolases	2	1
Ubiquitin-like	Concanavalin A-like lectins/glucanases	2	2
FAD/NAD(P)-binding domain	FAD/NAD-linked reductases, dimerisation (C-terminal) domain	2	2
Cryptochrome/photolyase, N-terminal domain	Cryptochrome/photolyase FAD-binding domain	2	2
Galactose mutarotase-like	(Trans)glycosidases	2	2
HAD-like	Calpain large subunit, middle domain (domain III)	2	2
A middle domain of Talin 1	I/LWEQ domain	2	2
Galactose-binding domain-like	Galactose-binding domain-like	2	2
P-loop containing nucleoside triphosphate hydrolases	Initiation factor IF2/eIF5b, domain 3	2	2
Clathrin adaptor appendage domain	Subdomain of clathrin and coatomer appendage domain	2	2
Ubiquitin-like	ARM repeat	2	2
Arp2/3 complex subunits	Arp2/3 complex subunits	2	2
HCP-like	HCP-like	2	2
I/LWEQ domain	I/LWEQ domain	2	2
Sec7 domain	ARM repeat	2	2
L domain-like	RNI-like	2	2
C-type lectin-like	Complement control module/SCR domain	2	1
EF-hand	C2 domain (Calcium/lipid-binding domain, CaLB)	2	2
Galactose-binding domain-like	(Trans)glycosidases	2	2
Nucleic acid-binding proteins	BRCT domain	2	2
Chaperone J-domain	Thioredoxin-like	2	1
Neurotransmitter-gated ion-channel transmembrane pore	Neurotransmitter-gated ion-channel transmembrane pore	2	2
ARM repeat	Ankyrin repeat	2	2
Ribonuclease H-like	RuvA domain 2-like	2	2
Putative DNA-binding domain	SAND domain-like	2	2
RNA-binding domain, RBD	P-loop containing nucleoside triphosphate hydrolases	2	2
Class II aaRS and biotin synthetases	Translation proteins	2	1
PH domain-like	I/LWEQ domain	2	2
F1F0 ATP synthase subunit C	F1F0 ATP synthase subunit C	2	2
ARM repeat	Formin homology 2 domain (FH2 domain)	2	2
PAP/OAS1 substrate-binding domain	PAP/Archaeal CCA-adding enzyme, C-terminal domain	2	2
vWA-like	SPOC domain-like	2	2
ARM repeat	P-loop containing nucleoside triphosphate hydrolases	2	2
Concanavalin A-like lectins/glucanases	BEACH domain	2	2
Nucleic acid-binding proteins	Eukaryotic type KH-domain (KH-domain type I)	2	1
R1 subunit of ribonucleotide reductase, N-terminal domain	PFL-like glycyl radical enzymes	2	1
Nucleotide cyclase	Nucleotide cyclase	2	2
Growth factor receptor domain	Immunoglobulin	2	2
C-type lectin-like	Kringle-like	1	1
EF-hand	Kelch motif	1	1
Conserved domain common to transcription factors TFIIS, elongin A, CRSP70	Elongation factor TFIIS domain 2	1	1
PUA domain-like	Ribosomal protein S5 domain 2-like	1	1
Nucleotidylyl transferase	Class II aaRS ABD-related	1	1
Lipovitellin-phosvitin complex; beta-sheet shell regions	Lipovitellin-phosvitin complex; beta-sheet shell regions	1	1
Nucleic acid-binding proteins	eIF-2-alpha, C-terminal domain	1	1
Rudiment single hybrid motif	Single hybrid motif	1	1
PUG domain-like	FYVE/PHD zinc finger	1	1
Acyl-CoA binding protein	Supernatant protein factor (SPF), C-terminal domain	1	1
Formin homology 2 domain (FH2 domain)	Vasodilator-stimulated phosphoprotein, VASP, tetramerisation domain	1	1
Ribosomal protein L25-like	Class II aaRS and biotin synthetases	1	1
Glucocorticoid receptor-like (DNA-binding domain)	SH3-domain	1	1
Eukaryotic RPB5 N-terminal domain	RPB5-like RNA polymerase subunit	1	1
Polo-box domain	Kelch motif	1	1
beta-beta-alpha zinc fingers	Ribonuclease H-like	1	1
Tex N-terminal region-like	SH2 domain	1	1
Alpha subunit of glutamate synthase, C-terminal domain	Nucleotide-binding domain	1	1
Neurotransmitter-gated ion-channel transmembrane pore	RmlC-like cupins	1	1
RING/U-box	Fibronectin type III	1	1
HIT-like	HIT-like	1	1
SH3-domain	RUN domain-like	1	1
L domain-like	SAM/Pointed domain	1	1
WD40 repeat-like	3-carboxy-cis,cis-mucoante lactonizing enzyme	1	1
Protein kinase-like (PK-like)	Ypt/Rab-GAP domain of gyp1p	1	1
Domain of poly(ADP-ribose) polymerase	Periplasmic binding protein-like II	1	1
Ribosomal protein L1	WD40 repeat-like	1	1
Hedgehog/DD-peptidase	Hedgehog/DD-peptidase	1	1
Cytochrome b5-like heme/steroid binding domain	Ferredoxin reductase-like, C-terminal NADP-linked domain	1	1
HAD-like	BRCT domain	1	1
HLH, helix-loop-helix DNA-binding domain	Orange domain-like	1	1
RNA-binding domain, RBD	SET domain	1	1
HMA, heavy metal-associated domain	HAD-like	1	1
Calponin-homology domain, CH-domain	RING/U-box	1	1
Multidrug resistance efflux transporter EmrE	Galactose-binding domain-like	1	1
Ribosomal protein S5 domain 2-like	Type II DNA topoisomerase	1	1
Protein kinase-like (PK-like)	Class II aaRS and biotin synthetases	1	1
RING/U-box	CSL zinc finger	1	1
BAR/IMD domain-like	Protein kinase-like (PK-like)	1	1
CCCH zinc finger	Chaperone J-domain	1	1
vWA-like	GFP-like	1	1
N-terminal nucleophile aminohydrolases (Ntn hydrolases)	Alpha subunit of glutamate synthase, C-terminal domain	1	1
RNA-binding domain, RBD	DPP6 N-terminal domain-like	1	1
PRTase-like	Ribulose-phoshate binding barrel	1	1
B-box zinc-binding domain	Concanavalin A-like lectins/glucanases	1	1
Clavaminate synthase-like	Tudor/PWWP/MBT	1	1
Sema domain	E set domains	1	1
Class I glutamine amidotransferase-like	Class I glutamine amidotransferase-like	1	1
Nicotinic receptor ligand binding domain-like	RmlC-like cupins	1	1
vWA-like	SAP domain	1	1
CCCH zinc finger	ISP domain	1	1
Domain of poly(ADP-ribose) polymerase	Periplasmic binding protein-like I	1	1
beta-beta-alpha zinc fingers	EGF/Laminin	1	1
PEP carboxykinase N-terminal domain	PEP carboxykinase-like	1	1
E set domains	GTPase activation domain, GAP	1	1
Peptidase/esterase 'gauge' domain	alpha/beta-Hydrolases	1	1
GST C-terminal domain-like	GST C-terminal domain-like	1	1
Plakin repeat	EF-hand	1	1
Methionyl-tRNA synthetase (MetRS), Zn-domain	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	1	1
Putative DNA-binding domain	Ran binding protein zinc finger-like	1	1
Aminopeptidase/glucanase lid domain	Zn-dependent exopeptidases	1	1
TSP-1 type 1 repeat	GFP-like	1	1
BRCA2 helical domain	Nucleic acid-binding proteins	1	1
UBA-like	XPC-binding domain	1	1
MIT domain	Cysteine proteinases	1	1
Metallo-dependent phosphatases	SAICAR synthase-like	1	1
Putative isomerase YbhE	WD40 repeat-like	1	1
Leucine zipper domain	Leucine zipper domain	1	1
TGS-like	Class II aaRS ABD-related	1	1
Single hybrid motif	Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex	1	1
WD40 repeat-like	Kelch motif	1	1
Metalloproteases ("zincins"), catalytic domain	Metalloproteases ("zincins"), catalytic domain	1	1
Metallo-dependent phosphatases	"Winged helix" DNA-binding domain	1	1
Band 7/SPFH domain	SCP-like	1	1
N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1	L30e-like	1	1
Supernatant protein factor (SPF), C-terminal domain	LDL receptor-like module	1	1
"Winged helix" DNA-binding domain	RNA-binding domain, RBD	1	1
vWA-like	EGF/Laminin	1	1
MIT domain	P-loop containing nucleoside triphosphate hydrolases	1	1
Actin depolymerizing proteins	VHP, Villin headpiece domain	1	1
Immunoglobulin	GFP-like	1	1
"Winged helix" DNA-binding domain	Moesin tail domain	1	1
TPR-like	Clavaminate synthase-like	1	1
Ribosomal protein S5 domain 2-like	DNA mismatch repair protein MutL	1	1
SET domain	RuBisCo LSMT C-terminal, substrate-binding domain	1	1
PH domain-like	Nucleotide-diphospho-sugar transferases	1	1
vWA-like	TSP-1 type 1 repeat	1	1
C2 domain (Calcium/lipid-binding domain, CaLB)	dsRNA-binding domain-like	1	1
Notch domain	Notch domain	1	1
PH domain-like	Vasodilator-stimulated phosphoprotein, VASP, tetramerisation domain	1	1
Concanavalin A-like lectins/glucanases	EF-hand	1	1
vWA-like	Immunoglobulin	1	1
Tudor/PWWP/MBT	SET domain	1	1
PGBD-like	Metalloproteases ("zincins"), catalytic domain	1	1
Glucocorticoid receptor-like (DNA-binding domain)	NAD(P)-binding Rossmann-fold domains	1	1
RING/U-box	Protein kinase-like (PK-like)	1	1
Activator of Hsp90 ATPase, Aha1	Bet v1-like	1	1
Spectrin repeat	Immunoglobulin	1	1
TRAF domain-like	TRAF domain-like	1	1
Ubiquitin-like	HAD-like	1	1
PDZ domain-like	WW domain	1	1
SMAD/FHA domain	Zinc beta-ribbon	1	1
Dom34/Pelota N-terminal domain-like	L30e-like	1	1
L9 N-domain-like	S-adenosyl-L-methionine-dependent methyltransferases	1	1
(Phosphotyrosine protein) phosphatases II	C2 domain (Calcium/lipid-binding domain, CaLB)	1	1
Tudor/PWWP/MBT	Ubiquitin-like	1	1
C-terminal autoproteolytic domain of nucleoporin nup98	Creatinase/prolidase N-terminal domain	1	1
Ribonuclease PH domain 2-like	TSP-1 type 1 repeat	1	1
SWIB/MDM2 domain	eIF1-like	1	1
beta-beta-alpha zinc fingers	WW domain	1	1
4Fe-4S ferredoxins	Formate dehydrogenase/DMSO reductase, domains 1-3	1	1
EF-hand	SH2 domain	1	1
BAR/IMD domain-like	Ankyrin repeat	1	1
FLJ32549 domain-like	FLJ32549 C-terminal domain-like	1	1
UDP-Glycosyltransferase/glycogen phosphorylase	UDP-Glycosyltransferase/glycogen phosphorylase	1	1
Multidrug resistance efflux transporter EmrE	(Trans)glycosidases	1	1
P-loop containing nucleoside triphosphate hydrolases	SMAD/FHA domain	1	1
GST C-terminal domain-like	Class II aaRS and biotin synthetases	1	1
MIR domain	Concanavalin A-like lectins/glucanases	1	1
Ribonuclease PH domain 2-like	EF-hand	1	1
PH domain-like	Formin homology 2 domain (FH2 domain)	1	1
Conserved domain common to transcription factors TFIIS, elongin A, CRSP70	CCCH zinc finger	1	1
ENTH/VHS domain	Periplasmic binding protein-like II	1	1
PDZ domain-like	C2 domain (Calcium/lipid-binding domain, CaLB)	1	1
Chaperone J-domain	CSL zinc finger	1	1
WD40 repeat-like	Bromodomain	1	1
beta-beta-alpha zinc fingers	Voltage-gated potassium channels	1	1
E set domains	Glycosyl hydrolase domain	1	1
EGF/Laminin	TIMP-like	1	1
Domain of the SRP/SRP receptor G-proteins	Signal peptide-binding domain	1	1
Glutathione synthetase ATP-binding domain-like	Single hybrid motif	1	1
Plexin repeat	TSP-1 type 1 repeat	1	1
S-adenosyl-L-methionine-dependent methyltransferases	WD40 repeat-like	1	1
Ligand-binding domain in the NO signalling and Golgi transport	FYVE/PHD zinc finger	1	1
Trypsin-like serine proteases	Trypsin-like serine proteases	1	1
Coiled-coil domain of nucleotide exchange factor GrpE	Head domain of nucleotide exchange factor GrpE	1	1
PapD-like	PapD-like	1	1
Transducin (heterotrimeric G protein), gamma chain	Regulator of G-protein signaling, RGS	1	1
Glucocorticoid receptor-like (DNA-binding domain)	WGR domain-like	1	1
ENTH/VHS domain	Clathrin adaptor appendage domain	1	1
SET domain	WW domain	1	1
Protein kinase-like (PK-like)	Rhodanese/Cell cycle control phosphatase	1	1
TPR-like	"Winged helix" DNA-binding domain	1	1
Chromo domain-like	BRK domain-like	1	1
Cullin homology domain	Second domain of FERM	1	1
WD40 repeat-like	Glycolipid transfer protein, GLTP	1	1
FMN-linked oxidoreductases	Alpha subunit of glutamate synthase, C-terminal domain	1	1
NAD(P)-binding Rossmann-fold domains	LDL receptor-like module	1	1
CCCH zinc finger	Retrovirus zinc finger-like domains	1	1
Nucleic acid-binding proteins	"Winged helix" DNA-binding domain	1	1
Lipovitellin-phosvitin complex; beta-sheet shell regions	Lipovitellin-phosvitin complex, superhelical domain	1	1
Cap-Gly domain	L domain-like	1	1
PGBD-like	Hemopexin-like domain	1	1
DBL homology domain (DH-domain)	Immunoglobulin	1	1
Chaperone J-domain	Phosphoenolpyruvate/pyruvate domain	1	1
Ribosomal protein S5 domain 2-like	EF-hand	1	1
NAD(P)-binding Rossmann-fold domains	Citrate synthase	1	1
HAD-like	Acyl-CoA binding protein	1	1
DBL homology domain (DH-domain)	Fibronectin type III	1	1
Galactose-binding domain-like	beta-Galactosidase/glucuronidase domain	1	1
Family A G protein-coupled receptor-like	Nucleotide-diphospho-sugar transferases	1	1
Cation efflux protein transmembrane domain-like	Homeodomain-like	1	1
ARM repeat	FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP)	1	1
P-loop containing nucleoside triphosphate hydrolases	ArfGap/RecO-like zinc finger	1	1
"Winged helix" DNA-binding domain	occludin/ELL-like	1	1
BRCT domain	P-loop containing nucleoside triphosphate hydrolases	1	1
MIR domain	MIR domain	1	1
vWA-like	BRCA2 tower domain	1	1
RUN domain-like	Tropomyosin	1	1
Eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment	Eukaryotic DNA topoisomerase I, dispensable insert domain	1	1
Metalloproteases ("zincins"), catalytic domain	Spermadhesin, CUB domain	1	1
Complement control module/SCR domain	Complement control module/SCR domain	1	1
Cysteine-rich domain	PH domain-like	1	1
Immunoglobulin	Heme-dependent peroxidases	1	1
Acetyl-CoA synthetase-like	ACP-like	1	1
RuvA domain 2-like	Nucleic acid-binding proteins	1	1
The spindle assembly checkpoint protein mad2	FYVE/PHD zinc finger	1	1
Periplasmic binding protein-like I	Periplasmic binding protein-like I	1	1
FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP)	Protein kinase-like (PK-like)	1	1
N-terminal nucleophile aminohydrolases (Ntn hydrolases)	Metallo-dependent phosphatases	1	1
SAM/Pointed domain	RING/U-box	1	1
S-adenosyl-L-methionine-dependent methyltransferases	Protein kinase-like (PK-like)	1	1
RING/U-box	WWE domain	1	1
Growth factor receptor domain	Ankyrin repeat	1	1
(Trans)glycosidases	Six-hairpin glycosidases	1	1
Protein kinase-like (PK-like)	Kelch motif	1	1
ArfGap/RecO-like zinc finger	Nucleotide-diphospho-sugar transferases	1	1
Ubiquitin-like	NAD kinase/diacylglycerol kinase-like	1	1
Spermadhesin, CUB domain	LDL receptor-like module	1	1
RCC1/BLIP-II	RCC1/BLIP-II	1	1
DEK C-terminal domain	SWIB/MDM2 domain	1	1
P-loop containing nucleoside triphosphate hydrolases	Second domain of FERM	1	1
GST C-terminal domain-like	Ribosomal protein L25-like	1	1
Periplasmic binding protein-like II	Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain	1	1
WW domain	SMAD/FHA domain	1	1
SH2 domain	RING/U-box	1	1
Tropomyosin	FYVE/PHD zinc finger	1	1
NAD(P)-binding Rossmann-fold domains	NAD(P)-binding Rossmann-fold domains	1	1
ClpP/crotonase	Kelch motif	1	1
2Fe-2S ferredoxin-like	alpha-helical ferredoxin	1	1
Acetyl-CoA synthetase-like	Quinoprotein alcohol dehydrogenase-like	1	1
Ribonuclease H-like	SMAD/FHA domain	1	1
Nqo1 middle domain-like	Nqo1C-terminal domain-like	1	1
beta-beta-alpha zinc fingers	Protein kinase-like (PK-like)	1	1
Concanavalin A-like lectins/glucanases	ARM repeat	1	1
MIR domain	IP3 receptor type 1 binding core, domain 2	1	1
NSFL1 (p97 ATPase) cofactor p47, SEP domain	Ubiquitin-like	1	1
Metallo-dependent phosphatases	UDP-Glycosyltransferase/glycogen phosphorylase	1	1
Mannose 6-phosphate receptor domain	Oxysterol-binding protein-like	1	1
P-loop containing nucleoside triphosphate hydrolases	Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain	1	1
RNA-binding domain, RBD	dsRNA-binding domain-like	1	1
PUG domain-like	Protein kinase-like (PK-like)	1	1
Taf5 N-terminal domain-like	WD40 repeat-like	1	1
Calponin-homology domain, CH-domain	P-loop containing nucleoside triphosphate hydrolases	1	1
Cysteine proteinases	alpha/beta-Hydrolases	1	1
ENTH/VHS domain	Periplasmic binding protein-like I	1	1
Fe,Mn superoxide dismutase (SOD), N-terminal domain	Fe,Mn superoxide dismutase (SOD), C-terminal domain	1	1
N-terminal nucleophile aminohydrolases (Ntn hydrolases)	FMN-linked oxidoreductases	1	1
GST C-terminal domain-like	eEF1-gamma domain	1	1
Nqo1 FMN-binding domain-like	Nqo1 middle domain-like	1	1
WD40 repeat-like	Nucleoporin domain	1	1
PH domain-like	HMG-box	1	1
Ribosomal protein L25-like	Class II aaRS ABD-related	1	1
Calponin-homology domain, CH-domain	SH2 domain	1	1
Voltage-gated potassium channels	EF-hand	1	1
Spectrin repeat	WW domain	1	1
L27 domain	L27 domain	1	1
PX domain	Phospholipase D/nuclease	1	1
TPR-like	Protein prenylyltransferase	1	1
BEACH domain	FYVE/PHD zinc finger	1	1
"Winged helix" DNA-binding domain	E2F-DP heterodimerization region	1	1
S-adenosylmethionine synthetase	S-adenosylmethionine synthetase	1	1
Calponin-homology domain, CH-domain	Plakin repeat	1	1
PUG domain-like	Ubiquitin-like	1	1
SH2 domain	Ankyrin repeat	1	1
FAD-binding/transporter-associated domain-like	FAD-linked oxidases, C-terminal domain	1	1
C2 domain (Calcium/lipid-binding domain, CaLB)	vWA-like	1	1
Nucleotidylyl transferase	Class II aaRS and biotin synthetases	1	1
Periplasmic binding protein-like I	Protein kinase-like (PK-like)	1	1
Cytochrome c	Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor	1	1
Polo-box domain	Polo-box domain	1	1
PYP-like sensor domain (PAS domain)	PYP-like sensor domain (PAS domain)	1	1
P-loop containing nucleoside triphosphate hydrolases	WW domain	1	1
Radical SAM enzymes	LDL receptor-like module	1	1
S-adenosyl-L-methionine-dependent methyltransferases	ITPase-like	1	1
C2 domain (Calcium/lipid-binding domain, CaLB)	P-loop containing nucleoside triphosphate hydrolases	1	1
EF-hand	Glutathione synthetase ATP-binding domain-like	1	1
DNA-binding domain	Bromodomain	1	1
Ribonuclease PH domain 2-like	Nop domain	1	1
(Trans)glycosidases	Beta-D-glucan exohydrolase, C-terminal domain	1	1
SNARE-like	P-loop containing nucleoside triphosphate hydrolases	1	1
Metallo-dependent phosphatases	GroEL apical domain-like	1	1
EF-hand	C-terminal domain of PLC-beta	1	1
Zn-dependent exopeptidases	ARM repeat	1	1
P-loop containing nucleoside triphosphate hydrolases	Homeodomain-like	1	1
Nucleotide-diphospho-sugar transferases	ARM repeat	1	1
Indigoidine synthase A-like	Ribokinase-like	1	1
Nucleotidylyl transferase	C-terminal domain of ProRS	1	1
Kix domain of CBP (creb binding protein)	FYVE/PHD zinc finger	1	1
Glutathione synthetase ATP-binding domain-like	Citrate synthase	1	1
Nucleotide-binding domain	4Fe-4S ferredoxins	1	1
WD40 repeat-like	Peptidase/esterase 'gauge' domain	1	1
Ypt/Rab-GAP domain of gyp1p	WD40 repeat-like	1	1
Multidrug resistance efflux transporter EmrE	beta-Galactosidase/glucuronidase domain	1	1
FYVE/PHD zinc finger	UDP-Glycosyltransferase/glycogen phosphorylase	1	1
P-loop containing nucleoside triphosphate hydrolases	Cysteine proteinases	1	1
Regulator of G-protein signaling, RGS	PX domain	1	1
GTPase activation domain, GAP	GTPase activation domain, GAP	1	1
Glutathione synthetase ATP-binding domain-like	NAD(P)-binding Rossmann-fold domains	1	1
Ribonuclease H-like	Nucleic acid-binding proteins	1	1
DNA-binding protein LAG-1 (CSL)	E set domains	1	1
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	1	1
TPR-like	PIN domain-like	1	1
EF-hand	Rhomboid-like	1	1
Zinc beta-ribbon	Zinc beta-ribbon	1	1
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase	DNA mismatch repair protein MutL	1	1
PH domain-like	BSD domain-like	1	1
Ubiquitin-like	"Winged helix" DNA-binding domain	1	1
Nucleic acid-binding proteins	eIF2alpha middle domain-like	1	1
SAICAR synthase-like	UDP-Glycosyltransferase/glycogen phosphorylase	1	1
L9 N-domain-like	Phosphoglucomutase, C-terminal domain	1	1
Mannose 6-phosphate receptor domain	PH domain-like	1	1
EF-hand	PLC-like phosphodiesterases	1	1
TSP-1 type 1 repeat	Nop domain	1	1
C2 domain (Calcium/lipid-binding domain, CaLB)	C-terminal domain of PLC-beta	1	1
Ribosomal L11/L12e N-terminal domain	Ribosomal protein L11, C-terminal domain	1	1
DBL homology domain (DH-domain)	SH2 domain	1	1
PRP4-like	Functional domain of the splicing factor Prp18	1	1
Prokaryotic ribosomal protein L17	Nucleotidylyl transferase	1	1
Protein kinase-like (PK-like)	NTF2-like	1	1
RING/U-box	BRCT domain	1	1
DNA-binding domain	FYVE/PHD zinc finger	1	1
SPOC domain-like	SAP domain	1	1
Ribonuclease H-like	"Winged helix" DNA-binding domain	1	1
Nucleotide cyclase	A DNA-binding domain in eukaryotic transcription factors	1	1
Voltage-gated potassium channels	NAD(P)-binding Rossmann-fold domains	1	1
Rof/RNase P subunit-like	Cysteine proteinases	1	1
BRCT domain	DNA/RNA polymerases	1	1
P-loop containing nucleoside triphosphate hydrolases	Signal peptide-binding domain	1	1
DNA-binding domain	SET domain	1	1
Somatomedin B domain	TSP-1 type 1 repeat	1	1
Glutamine synthetase, N-terminal domain	Glutamine synthetase/guanido kinase	1	1
"Winged helix" DNA-binding domain	PRC-barrel domain	1	1
Actin-like ATPase domain	SNARE fusion complex	1	1
TB module/8-cys domain	Growth factor receptor domain	1	1
P-loop containing nucleoside triphosphate hydrolases	Hypothetical protein YjiA, C-terminal domain	1	1
SPOC domain-like	C-terminal domain of Ku80	1	1
EF-hand	YVTN repeat-like/Quinoprotein amine dehydrogenase	1	1
Protein kinase-like (PK-like)	POZ domain	1	1
Nucleotidylyl transferase	An anticodon-binding domain of class I aminoacyl-tRNA synthetases	1	1
CCCH zinc finger	CSL zinc finger	1	1
FYVE/PHD zinc finger	SAM/Pointed domain	1	1
Putative DNA-binding domain	Cation efflux protein transmembrane domain-like	1	1
PDZ domain-like	GTPase activation domain, GAP	1	1
Terpenoid synthases	Restriction endonuclease-like	1	1
PH domain-like	Bet v1-like	1	1
PLC-like phosphodiesterases	C-terminal domain of PLC-beta	1	1
GTPase activation domain, GAP	SH3-domain	1	1
Outer arm dynein light chain 1	Tropomyosin	1	1
UDP-glucose/GDP-mannose dehydrogenase C-terminal domain	UDP-glucose/GDP-mannose dehydrogenase C-terminal domain	1	1
Ubiquitin-like	Cap-Gly domain	1	1
UBC-like	UBA-like	1	1
TPR-like	RNA-binding domain, RBD	1	1
Zn-dependent exopeptidases	Bacterial exopeptidase dimerisation domain	1	1
(Phosphotyrosine protein) phosphatases II	Nucleic acid-binding proteins	1	1
L domain-like	Actin depolymerizing proteins	1	1
Sec1/munc18-like (SM) proteins	Sec1/munc18-like (SM) proteins	1	1
C-terminal autoproteolytic domain of nucleoporin nup98	Creatinase/aminopeptidase	1	1
Cysteine-rich domain	NAD kinase/diacylglycerol kinase-like	1	1
Immunoglobulin	alpha/beta-Hydrolases	1	1
ENTH/VHS domain	Voltage-gated potassium channels	1	1
"Winged helix" DNA-binding domain	Regulator of G-protein signaling, RGS	1	1
N-terminal nucleophile aminohydrolases (Ntn hydrolases)	alpha-helical ferredoxin	1	1
SAM/Pointed domain	"Winged helix" DNA-binding domain	1	1
WD40 repeat-like	Cyclophilin-like	1	1
Tudor/PWWP/MBT	BRCT domain	1	1
Spermadhesin, CUB domain	EGF/Laminin	1	1
Protein kinase-like (PK-like)	NAD(P)-binding Rossmann-fold domains	1	1
Tex N-terminal region-like	Nucleic acid-binding proteins	1	1
WW domain	FKBP-like	1	1
DEATH domain	Caspase-like	1	1
Nucleotide-diphospho-sugar transferases	Seven-hairpin glycosidases	1	1
SH2 domain	WD40 repeat-like	1	1
Band 7/SPFH domain	Ribonuclease H-like	1	1
SAP domain	Concanavalin A-like lectins/glucanases	1	1
Ankyrin repeat	Nucleotide-diphospho-sugar transferases	1	1
Chaperone J-domain	ARM repeat	1	1
L domain-like	PDZ domain-like	1	1
PAH2 domain	PAH2 domain	1	1
Immunoglobulin	Calponin-homology domain, CH-domain	1	1
SH2 domain	Trm112p-like	1	1
PDZ domain-like	BAR/IMD domain-like	1	1
Methionyl-tRNA synthetase (MetRS), Zn-domain	Nucleotidylyl transferase	1	1
Class I glutamine amidotransferase-like	GMP synthetase C-terminal dimerisation domain	1	1
Ribonuclease PH domain 2-like	alpha/beta-Hydrolases	1	1
Retrovirus zinc finger-like domains	RING/U-box	1	1
ARID-like	Chromo domain-like	1	1
Ubiquitin-like	Moesin tail domain	1	1
Ribosomal protein S5 domain 2-like	alpha/beta-Hydrolases	1	1
SMAD/FHA domain	PH domain-like	1	1
Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain	Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain	1	1
PDZ domain-like	Regulator of G-protein signaling, RGS	1	1
P-loop containing nucleoside triphosphate hydrolases	beta-beta-alpha zinc fingers	1	1
SET domain	Homeodomain-like	1	1
(Phosphotyrosine protein) phosphatases II	Cyclin-like	1	1
"Winged helix" DNA-binding domain	UDP-Glycosyltransferase/glycogen phosphorylase	1	1
PH domain-like	Wiscott-Aldrich syndrome protein, WASP, C-terminal domain	1	1
Retrovirus zinc finger-like domains	ISP domain	1	1
Sema domain	TSP-1 type 1 repeat	1	1
Protein kinase-like (PK-like)	EF-hand	1	1
TPR-like	Chaperone J-domain	1	1
TPR-like	ARM repeat	1	1
Ankyrin repeat	Eukaryotic type KH-domain (KH-domain type I)	1	1
HR1 repeat	Protein kinase-like (PK-like)	1	1
Sm-like ribonucleoproteins	Ferredoxin reductase-like, C-terminal NADP-linked domain	1	1
Sema domain	GTPase activation domain, GAP	1	1
RNA-binding domain, RBD	Ran binding protein zinc finger-like	1	1
Actin-like ATPase domain	AF1104-like	1	1
BSD domain-like	BSD domain-like	1	1
Dom34/Pelota N-terminal domain-like	Translational machinery components	1	1
Glucocorticoid receptor-like (DNA-binding domain)	Domain of poly(ADP-ribose) polymerase	1	1
L9 N-domain-like	Phosphoglucomutase, first 3 domains	1	1
SAP domain	P-loop containing nucleoside triphosphate hydrolases	1	1
Ankyrin repeat	FabD/lysophospholipase-like	1	1
GroEL apical domain-like	SAICAR synthase-like	1	1
L9 N-domain-like	Ribonuclease H-like	1	1
Staphylococcal nuclease	Tudor/PWWP/MBT	1	1
E set domains	NHL repeat	1	1
GST C-terminal domain-like	C-terminal domain of ProRS	1	1
PRP4-like	WD40 repeat-like	1	1
NAD(P)-binding Rossmann-fold domains	DHS-like NAD/FAD-binding domain	1	1
Growth factor receptor domain	(Phosphotyrosine protein) phosphatases II	1	1
Band 7/SPFH domain	PAZ domain	1	1
ADP-ribosylation	ADP-ribosylation	1	1
Carbon-nitrogen hydrolase	HIT-like	1	1
TRAF domain-like	POZ domain	1	1
Suppressor of Fused, N-terminal domain	Suppressor of Fused, N-terminal domain	1	1
alpha/beta-Hydrolases	alpha/beta-Hydrolases	1	1
Polo-box domain	EF-hand	1	1
DNA breaking-rejoining enzymes	Eukaryotic DNA topoisomerase I, dispensable insert domain	1	1
cAMP-binding domain-like	Ras GEF	1	1
Hypothetical protein c14orf129, hspc210	TPR-like	1	1
Lipase/lipooxygenase domain (PLAT/LH2 domain)	Lipase/lipooxygenase domain (PLAT/LH2 domain)	1	1
Chaperone J-domain	Sec63 N-terminal domain-like	1	1
Bromodomain	HLH, helix-loop-helix DNA-binding domain	1	1
(Phosphotyrosine protein) phosphatases II	DNA ligase/mRNA capping enzyme, catalytic domain	1	1
UBA-like	KA1-like	1	1
C2 domain (Calcium/lipid-binding domain, CaLB)	Chaperone J-domain	1	1
Adenine nucleotide alpha hydrolases-like	Cation efflux protein transmembrane domain-like	1	1
Ribosomal protein L4	Ribosomal protein L4	1	1
WGR domain-like	Periplasmic binding protein-like II	1	1
Plus3-like	Restriction endonuclease-like	1	1
WD40 repeat-like	UBC-like	1	1
Protein kinase-like (PK-like)	UBA-like	1	1
Bromodomain	HMG-box	1	1
Ankyrin repeat	Immunoglobulin	1	1
Acyl-CoA N-acyltransferases (Nat)	ARM repeat	1	1
BPTI-like	Immunoglobulin	1	1
Class II aaRS ABD-related	C-terminal domain of ProRS	1	1
Cadherin-like	Concanavalin A-like lectins/glucanases	1	1
Plexin repeat	E set domains	1	1
Class I glutamine amidotransferase-like	Adenine nucleotide alpha hydrolases-like	1	1
Thiamin diphosphate-binding fold (THDP-binding)	TK C-terminal domain-like	1	1
Nucleotidylyl transferase	Nucleic acid-binding proteins	1	1
Protein kinase-like (PK-like)	L27 domain	1	1
Polo-box domain	POZ domain	1	1
L domain-like	RING/U-box	1	1
CCHHC domain	CCHHC domain	1	1
P-loop containing nucleoside triphosphate hydrolases	RNI-like	1	1
Metallo-dependent phosphatases	EF-hand	1	1
Fibronectin type III	Cyclin-like	1	1
Cation efflux protein cytoplasmic domain-like	HAND domain of the nucleosome remodeling ATPase ISWI	1	1
ARM repeat	Hect, E3 ligase catalytic domain	1	1
Molybdenum cofactor biosynthesis proteins	Adenine nucleotide alpha hydrolases-like	1	1
Nuclear receptor ligand-binding domain	Nuclear receptor ligand-binding domain	1	1
beta-beta-alpha zinc fingers	cAMP-binding domain-like	1	1
SAM/Pointed domain	ADP-ribosylation	1	1
Frizzled cysteine-rich domain	TIMP-like	1	1
Glucocorticoid receptor-like (DNA-binding domain)	VPS9 domain	1	1
PH domain-like	PLC-like phosphodiesterases	1	1
beta and beta-prime subunits of DNA dependent RNA-polymerase	beta and beta-prime subunits of DNA dependent RNA-polymerase	1	1
Kazal-type serine protease inhibitors	Kazal-type serine protease inhibitors	1	1
Translation initiation factor 2 beta, aIF2beta, N-terminal domain	ARM repeat	1	1
Ankyrin repeat	Cap-Gly domain	1	1
Thioredoxin-like	PUG domain-like	1	1
PH domain-like	Trm112p-like	1	1
Rof/RNase P subunit-like	Calpain large subunit, middle domain (domain III)	1	1
HAD-like	HAD-like	1	1
Histone-fold	Macro domain-like	1	1
WW domain	BAG domain	1	1
N-terminal nucleophile aminohydrolases (Ntn hydrolases)	Nucleotide-binding domain	1	1
Staphylococcal nuclease	Staphylococcal nuclease	1	1
TPR-like	Ribosomal protein S10	1	1
Acyl-CoA N-acyltransferases (Nat)	EGF/Laminin	1	1
CCHHC domain	Acyl-CoA N-acyltransferases (Nat)	1	1
Cullin homology domain	Protein kinase-like (PK-like)	1	1
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain	Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain	1	1
HMA, heavy metal-associated domain	Calcium ATPase, transduction domain A	1	1
Protease propeptides/inhibitors	Galactose-binding domain-like	1	1
TATA-box binding protein-like	P-loop containing nucleoside triphosphate hydrolases	1	1
Prokaryotic ribosomal protein L17	ValRS/IleRS/LeuRS editing domain	1	1
Protease propeptides/inhibitors	Zn-dependent exopeptidases	1	1
L27 domain	P-loop containing nucleoside triphosphate hydrolases	1	1
DNA clamp	DNA clamp	1	1
Ribosomal protein S5 domain 2-like	TSP-1 type 1 repeat	1	1
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain	Pyrimidine nucleoside phosphorylase C-terminal domain	1	1
Fibronectin type III	Concanavalin A-like lectins/glucanases	1	1
WW domain	PH domain-like	1	1
BAR/IMD domain-like	ArfGap/RecO-like zinc finger	1	1
4'-phosphopantetheinyl transferase	4'-phosphopantetheinyl transferase	1	1
TGS-like	ThrRS/AlaRS common domain	1	1
S15/NS1 RNA-binding domain	Class II aaRS and biotin synthetases	1	1
Eukaryotic type KH-domain (KH-domain type I)	Retrovirus zinc finger-like domains	1	1
TATA-box binding protein-like	N-terminal domain of alpha and beta subunits of F1 ATP synthase	1	1
PH domain-like	Ypt/Rab-GAP domain of gyp1p	1	1
mRNA decapping enzyme DcpS N-terminal domain	HIT-like	1	1
GMP synthetase C-terminal dimerisation domain	GMP synthetase C-terminal dimerisation domain	1	1
Cullin homology domain	PH domain-like	1	1
Translation proteins	Translation proteins	1	1
N-terminal nucleophile aminohydrolases (Ntn hydrolases)	SIS domain	1	1
Voltage-gated potassium channels	Small-conductance potassium channel	1	1
vWA-like	Nucleic acid-binding proteins	1	1
TAZ domain	FYVE/PHD zinc finger	1	1
Quinoprotein alcohol dehydrogenase-like	WD40 repeat-like	1	1
Chromo domain-like	EGF/Laminin	1	1
Protein kinase-like (PK-like)	YVTN repeat-like/Quinoprotein amine dehydrogenase	1	1
WGR domain-like	Periplasmic binding protein-like I	1	1
ARM repeat	SH2 domain	1	1
Growth factor receptor domain	Notch domain	1	1
Putative methyltransferase TM0872, insert domain	WD40 repeat-like	1	1
P-loop containing nucleoside triphosphate hydrolases	LigT-like	1	1
BRK domain-like	Bromodomain	1	1
Calponin-homology domain, CH-domain	Calponin-homology domain, CH-domain	1	1
Domain of poly(ADP-ribose) polymerase	Voltage-gated potassium channels	1	1
Putative DNA-binding domain	Class II aaRS and biotin synthetases	1	1
MAST3 pre-PK domain-like	PDZ domain-like	1	1
SAND domain-like	Ran binding protein zinc finger-like	1	1
TRAF domain-like	Cysteine proteinases	1	1
RNA-binding domain, RBD	S-adenosyl-L-methionine-dependent methyltransferases	1	1
POZ domain	Mannose-binding lectins	1	1
L domain-like	UBA-like	1	1
FMN-linked oxidoreductases	dsRNA-binding domain-like	1	1
Zinc-binding domain of translation initiation factor 2 beta	ARM repeat	1	1
beta-beta-alpha zinc fingers	S-adenosyl-L-methionine-dependent methyltransferases	1	1
DNA/RNA polymerases	Immunoglobulin	1	1
Calponin-homology domain, CH-domain	EB1 dimerisation domain-like	1	1
DBL homology domain (DH-domain)	Ras GEF	1	1
Metallo-hydrolase/oxidoreductase	beta-beta-alpha zinc fingers	1	1
Nucleotide-diphospho-sugar transferases	Nucleotide-diphospho-sugar transferases	1	1
PDZ domain-like	(Phosphotyrosine protein) phosphatases II	1	1
Cullin homology domain	ARM repeat	1	1
YVTN repeat-like/Quinoprotein amine dehydrogenase	POZ domain	1	1
SMAD/FHA domain	Conserved domain common to transcription factors TFIIS, elongin A, CRSP70	1	1
YVTN repeat-like/Quinoprotein amine dehydrogenase	Kelch motif	1	1
SAM/Pointed domain	PDZ domain-like	1	1
Nicotinate/Quinolinate PRTase N-terminal domain-like	Nicotinate/Quinolinate PRTase C-terminal domain-like	1	1
IP3 receptor type 1 binding core, domain 2	Concanavalin A-like lectins/glucanases	1	1
L domain-like	Concanavalin A-like lectins/glucanases	1	1
Nudix	DNase I-like	1	1
CalX-like	C-type lectin-like	1	1
TSP-1 type 1 repeat	BPTI-like	1	1
DBL homology domain (DH-domain)	Protein kinase-like (PK-like)	1	1
I/LWEQ domain	alpha-catenin/vinculin-like	1	1
P-loop containing nucleoside triphosphate hydrolases	vWA-like	1	1
NAD(P)-binding Rossmann-fold domains	Immunoglobulin	1	1
L domain-like	NTF2-like	1	1
HMA, heavy metal-associated domain	Calcium ATPase, transmembrane domain M	1	1
Macro domain-like	Zn-dependent exopeptidases	1	1
P-loop containing nucleoside triphosphate hydrolases	HAND domain of the nucleosome remodeling ATPase ISWI	1	1
Glucocorticoid receptor-like (DNA-binding domain)	VHP, Villin headpiece domain	1	1
PurM N-terminal domain-like	PurM C-terminal domain-like	1	1
eIF4e-like	Protein kinase-like (PK-like)	1	1
Adenine nucleotide alpha hydrolases-like	GMP synthetase C-terminal dimerisation domain	1	1
Protease propeptides/inhibitors	Subtilisin-like	1	1
Galactose-binding domain-like	Protein kinase-like (PK-like)	1	1
N-terminal domain of cbl (N-cbl)	RING/U-box	1	1
Hypothetical protein SAV1430	Fe-S cluster assembly (FSCA) domain-like	1	1
Class II aaRS and biotin synthetases	Anticodon-binding domain of PheRS	1	1
RUN domain-like	PH domain-like	1	1
TNF receptor-like	TNF receptor-like	1	1
Glutathione synthetase ATP-binding domain-like	Rudiment single hybrid motif	1	1
Cation efflux protein transmembrane domain-like	HAND domain of the nucleosome remodeling ATPase ISWI	1	1
RNI-like	RNI-like	1	1
FAD-linked reductases, C-terminal domain	Ankyrin repeat	1	1
POZ domain	Alpha-L RNA-binding motif	1	1
Regulator of G-protein signaling, RGS	PH domain-like	1	1
FYVE/PHD zinc finger	Rabenosyn-5 Rab-binding domain-like	1	1
N-terminal nucleophile aminohydrolases (Ntn hydrolases)	Thiamin diphosphate-binding fold (THDP-binding)	1	1
Calponin-homology domain, CH-domain	SH3-domain	1	1
Nqo1 FMN-binding domain-like	Nqo1C-terminal domain-like	1	1
CalX-like	CalX-like	1	1
P-loop containing nucleoside triphosphate hydrolases	Growth factor receptor domain	1	1
HMA, heavy metal-associated domain	Metal cation-transporting ATPase, ATP-binding domain N	1	1
TSP type-3 repeat	TSP type-3 repeat	1	1
L domain-like	WD40 repeat-like	1	1
Nucleic acid-binding proteins	BRCA2 tower domain	1	1
Periplasmic binding protein-like I	Nucleotide cyclase	1	1
Terpenoid synthases	RuvA domain 2-like	1	1
Polo-box domain	YVTN repeat-like/Quinoprotein amine dehydrogenase	1	1
PX domain	RNI-like	1	1
CCCH zinc finger	Rhodanese/Cell cycle control phosphatase	1	1
Fibronectin type III	Multiheme cytochromes	1	1
YVTN repeat-like/Quinoprotein amine dehydrogenase	WD40 repeat-like	1	1
NAD(P)-binding Rossmann-fold domains	Clavaminate synthase-like	1	1
FMN-linked oxidoreductases	4Fe-4S ferredoxins	1	1
Formate/glycerate dehydrogenase catalytic domain-like	DHS-like NAD/FAD-binding domain	1	1
EGF/Laminin	Methyl-accepting chemotaxis protein (MCP) signaling domain	1	1
GTPase activation domain, GAP	Bet v1-like	1	1
Smc hinge domain	Tropomyosin	1	1
NAD-binding domain of HMG-CoA reductase	Substrate-binding domain of HMG-CoA reductase	1	1
alpha-helical ferredoxin	4Fe-4S ferredoxins	1	1
BRCT domain	Homeodomain-like	1	1
Acyl-CoA N-acyltransferases (Nat)	Acyl-CoA N-acyltransferases (Nat)	1	1
Putative DNA-binding domain	Putative DNA-binding domain	1	1
RNI-like	WD40 repeat-like	1	1
A middle domain of Talin 1	alpha-catenin/vinculin-like	1	1
Protein kinase-like (PK-like)	Chaperone J-domain	1	1
Spectrin repeat	DBL homology domain (DH-domain)	1	1
POZ domain	Galactose-binding domain-like	1	1
Ribonuclease H-like	Phosphoglucomutase, first 3 domains	1	1
PH domain-like	alpha-catenin/vinculin-like	1	1
PH domain-like	NHL repeat	1	1
Lissencephaly-1 protein (Lis-1, PAF-AH alpha) N-terminal domain	WD40 repeat-like	1	1
Dcp2 domain-like	Nudix	1	1
Concanavalin A-like lectins/glucanases	Putative isomerase YbhE	1	1
SAM/Pointed domain	GTPase activation domain, GAP	1	1
YWTD domain	YWTD domain	1	1
SH3-domain	SAM/Pointed domain	1	1
P-loop containing nucleoside triphosphate hydrolases	Class I glutamine amidotransferase-like	1	1
Glucocorticoid receptor-like (DNA-binding domain)	Putative DNA-binding domain	1	1
Cysteine proteinases	C2 domain (Calcium/lipid-binding domain, CaLB)	1	1
Putative DNA-binding domain	PheT/TilS domain	1	1
WW domain	EF-hand	1	1
UBA-like	UBA-like	1	1
ThrRS/AlaRS common domain	Class II aaRS ABD-related	1	1
Eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment	DNA breaking-rejoining enzymes	1	1
TATA-box binding protein-like	Zn-binding ribosomal proteins	1	1
RING/U-box	Immunoglobulin	1	1
RING/U-box	Rnp2-like	1	1
Spectrin repeat	Plakin repeat	1	1
PUA domain-like	Nucleotidylyl transferase	1	1
Ribosomal protein S5 domain 2-like	Nop domain	1	1
TATA-box binding protein-like	C-terminal domain of alpha and beta subunits of F1 ATP synthase	1	1
E set domains	(Trans)glycosidases	1	1
Chaperone J-domain	beta-beta-alpha zinc fingers	1	1
RING/U-box	PX domain	1	1
CAD & PB1 domains	Cysteine-rich domain	1	1
vWA-like	Growth factor receptor domain	1	1
TPR-like	Ankyrin repeat	1	1
Ribonuclease H-like	Phosphoglucomutase, C-terminal domain	1	1
Galactose-binding domain-like	BRCT domain	1	1
N-terminal domain of cbl (N-cbl)	EF-hand	1	1
BEACH domain	Putative isomerase YbhE	1	1
UBA-like	DNase I-like	1	1
PreATP-grasp domain	Rudiment single hybrid motif	1	1
BRCT domain	post-AAA+ oligomerization domain-like	1	1
HAD-like	MIT domain	1	1
Starch-binding domain-like	PLC-like phosphodiesterases	1	1
RING/U-box	UBA-like	1	1
beta-lactamase/transpeptidase-like	Thioredoxin-like	1	1
Chromo domain-like	ARM repeat	1	1
EF-hand	Nop domain	1	1
Ankyrin repeat	SH3-domain	1	1
RNI-like	UBC-like	1	1
ISP transmembrane anchor	ISP domain	1	1
Alpha subunit of glutamate synthase, C-terminal domain	alpha-helical ferredoxin	1	1
Plexin repeat	vWA-like	1	1
WGR domain-like	Voltage-gated potassium channels	1	1
SAM/Pointed domain	SH2 domain	1	1
Metalloproteases ("zincins"), catalytic domain	EGF/Laminin	1	1
EGF/Laminin	ARM repeat	1	1
Protein kinase-like (PK-like)	Zn-dependent exopeptidases	1	1
ClpP/crotonase	ClpP/crotonase	1	1
ADP-ribosylation	Periplasmic binding protein-like I	1	1
Thioredoxin-like	eEF1-gamma domain	1	1
Protein kinase-like (PK-like)	Cysteine proteinases	1	1
alpha/beta-Hydrolases	Nop domain	1	1
S15/NS1 RNA-binding domain	Class II aaRS ABD-related	1	1
BRCA2 helical domain	BRCA2 tower domain	1	1
Ubiquitin-like	Ankyrin repeat	1	1
SAM/Pointed domain	PH domain-like	1	1
Calponin-homology domain, CH-domain	DBL homology domain (DH-domain)	1	1
LDL receptor-like module	Mannose 6-phosphate receptor domain	1	1
Cation efflux protein transmembrane domain-like	P-loop containing nucleoside triphosphate hydrolases	1	1
Nucleic acid-binding proteins	TPR-like	1	1
alpha/beta-Hydrolases	EF-hand	1	1
beta-beta-alpha zinc fingers	Ankyrin repeat	1	1
SMAD/FHA domain	Protein kinase-like (PK-like)	1	1
EF-hand	DBL homology domain (DH-domain)	1	1
EF-hand	POZ domain	1	1
Immunoglobulin	DPP6 N-terminal domain-like	1	1
Ypt/Rab-GAP domain of gyp1p	SH3-domain	1	1
beta-beta-alpha zinc fingers	Growth factor receptor domain	1	1
Cullin repeat-like	Protein kinase-like (PK-like)	1	1
Acyl-CoA binding protein	Ankyrin repeat	1	1
Ubiquitin-like	The spindle assembly checkpoint protein mad2	1	1
BEACH domain	NHL repeat	1	1
FF domain	SMAD/FHA domain	1	1
lambda repressor-like DNA-binding domains	lambda repressor-like DNA-binding domains	1	1
PUG domain-like	Galactose-binding domain-like	1	1
P-loop containing nucleoside triphosphate hydrolases	HRDC-like	1	1
"Winged helix" DNA-binding domain	Transducin (heterotrimeric G protein), gamma chain	1	1
Conserved domain common to transcription factors TFIIS, elongin A, CRSP70	Zinc beta-ribbon	1	1
ADP-ribosylation	Voltage-gated potassium channels	1	1
PUG domain-like	Cysteine proteinases	1	1
P-loop containing nucleoside triphosphate hydrolases	Phosphoglycerate mutase-like	1	1
P-loop containing nucleoside triphosphate hydrolases	Prokaryotic type KH domain (KH-domain type II)	1	1
Bet v1-like	MIT domain	1	1
vWA-like	BRCA2 helical domain	1	1
Amine oxidase N-terminal region	Amine oxidase catalytic domain	1	1
BRCT domain	DBL homology domain (DH-domain)	1	1
Glutathione synthetase ATP-binding domain-like	Phosphoglycerate mutase-like	1	1
P-loop containing nucleoside triphosphate hydrolases	Fzo-like conserved region	1	1
TPR-like	RNI-like	1	1
FabD/lysophospholipase-like	Probable ACP-binding domain of malonyl-CoA ACP transacylase	1	1
Thioredoxin-like	FAD/NAD-linked reductases, dimerisation (C-terminal) domain	1	1
Elongation factor Ts (EF-Ts), dimerisation domain	Elongation factor Ts (EF-Ts), dimerisation domain	1	1
Radical SAM enzymes	Acyl-CoA N-acyltransferases (Nat)	1	1
Mannose 6-phosphate receptor domain	Mannose 6-phosphate receptor domain	1	1
BAR/IMD domain-like	Nucleotide-diphospho-sugar transferases	1	1
Cullin repeat-like	ARM repeat	1	1
GST C-terminal domain-like	Nucleotidylyl transferase	1	1
Spectrin repeat	RING/U-box	1	1
NAD kinase/diacylglycerol kinase-like	Ankyrin repeat	1	1
FYVE/PHD zinc finger	Concanavalin A-like lectins/glucanases	1	1
NTF2-like	UBA-like	1	1
RING/U-box	YWTD domain	1	1
Immunoglobulin	Tricorn protease domain 2	1	1
Ankyrin repeat	Caspase-like	1	1
Metallo-hydrolase/oxidoreductase	UBC-like	1	1
HAD-like	Ankyrin repeat	1	1
Calpain large subunit, middle domain (domain III)	C2 domain (Calcium/lipid-binding domain, CaLB)	1	1
Clathrin heavy-chain terminal domain	ARM repeat	1	1
Galactose-binding domain-like	EGF/Laminin	1	1
TPR-like	Metallo-dependent phosphatases	1	1
MIT domain	Calpain large subunit, middle domain (domain III)	1	1
Purple acid phosphatase, N-terminal domain	Metallo-dependent phosphatases	1	1
Class II aaRS and biotin synthetases	C-terminal domain of ProRS	1	1
Ubiquitin-like	Zn-binding ribosomal proteins	1	1
Cullin homology domain	Moesin tail domain	1	1
DEATH domain	WD40 repeat-like	1	1
Ribosomal protein L25-like	C-terminal domain of ProRS	1	1
RUN domain-like	RUN domain-like	1	1
RNA-binding domain, RBD	PH domain-like	1	1
TGS-like	Class II aaRS and biotin synthetases	1	1
Rof/RNase P subunit-like	EF-hand	1	1
CAD & PB1 domains	Protein kinase-like (PK-like)	1	1
FAD/NAD(P)-binding domain	Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain	1	1
Prokaryotic type KH domain (KH-domain type II)	Ribosomal protein S3 C-terminal domain	1	1
GST C-terminal domain-like	eEF-1beta-like	1	1
Protein kinase-like (PK-like)	Histone-fold	1	1
Acid proteases	Ribonuclease H-like	1	1
ENTH/VHS domain	RNA-binding domain, RBD	1	1
Cation efflux protein cytoplasmic domain-like	P-loop containing nucleoside triphosphate hydrolases	1	1
vWA-like	Cysteine-rich domain	1	1
UBC-like	Class II aaRS and biotin synthetases	1	1
FKBP-like	FKBP-like	1	1
vWA-like	C-terminal domain of Ku80	1	1
"Winged helix" DNA-binding domain	SAICAR synthase-like	1	1
RuvA domain 2-like	SH2 domain	1	1
RNA-binding domain, RBD	PX domain	1	1
FYVE/PHD zinc finger	Acyl-CoA N-acyltransferases (Nat)	1	1
PLP-dependent transferases	Adenine nucleotide alpha hydrolases-like	1	1
PH domain-like	C-terminal domain of PLC-beta	1	1
Calponin-homology domain, CH-domain	WW domain	1	1
FYVE/PHD zinc finger	GroEL apical domain-like	1	1
EF-hand	GAS2 domain-like	1	1
Rhodanese/Cell cycle control phosphatase	Cysteine proteinases	1	1
PA domain	Zn-dependent exopeptidases	1	1
Cysteine-rich domain	SAM/Pointed domain	1	1
Zn-dependent exopeptidases	Zn-dependent exopeptidases	1	1
N-terminal domain of adenylylcyclase associated protein, CAP	C-terminal domain of adenylylcyclase associated protein	1	1
Ubiquitin-like	FYVE/PHD zinc finger	1	1
Aconitase iron-sulfur domain	LeuD/IlvD-like	1	1
"Winged helix" DNA-binding domain	Second domain of FERM	1	1
"Winged helix" DNA-binding domain	HRDC-like	1	1
ADP-ribosylation	Periplasmic binding protein-like II	1	1
RNA-binding domain, RBD	DBL homology domain (DH-domain)	1	1
Second domain of FERM	alpha-catenin/vinculin-like	1	1
PLC-like phosphodiesterases	C2 domain (Calcium/lipid-binding domain, CaLB)	1	1
TATA-box binding protein-like	DNA-glycosylase	1	1
Mitochondrial carrier	Glutathione synthetase ATP-binding domain-like	1	1
PheT/TilS domain	Class II aaRS and biotin synthetases	1	1
EGF/Laminin	YWTD domain	1	1
cAMP-binding domain-like	FabD/lysophospholipase-like	1	1
F-box domain	Sec7 domain	1	1
Oligoxyloglucan reducing end-specific cellobiohydrolase	Oligoxyloglucan reducing end-specific cellobiohydrolase	1	1
alpha/beta-Hydrolases	TSP-1 type 1 repeat	1	1
ARM repeat	SH3-domain	1	1
GAF domain-like	HD-domain/PDEase-like	1	1
B-box zinc-binding domain	TRAF domain-like	1	1
SET domain	beta-beta-alpha zinc fingers	1	1
"Winged helix" DNA-binding domain	GroEL apical domain-like	1	1
2Fe-2S ferredoxin-like	4Fe-4S ferredoxins	1	1
RNA-binding domain, RBD	PF0523-like	1	1
FAD/NAD(P)-binding domain	Ankyrin repeat	1	1
Ribonuclease H-like	SH2 domain	1	1
CCCH zinc finger	CHY zinc finger-like	1	1
FAD-linked reductases, C-terminal domain	EF-hand	1	1
Inosine monophosphate dehydrogenase (IMPDH)	Inosine monophosphate dehydrogenase (IMPDH)	1	1
Ribonuclease H-like	HRDC-like	1	1
SH3-domain	C2 domain (Calcium/lipid-binding domain, CaLB)	1	1
ARM repeat	FYVE/PHD zinc finger	1	1
SNF-like	P-loop containing nucleoside triphosphate hydrolases	1	1
Surp module (SWAP domain)	ENTH/VHS domain	1	1
RING/U-box	Phospholipase D/nuclease	1	1
Metal cation-transporting ATPase, ATP-binding domain N	Metal cation-transporting ATPase, ATP-binding domain N	1	1
Ankyrin repeat	SOCS box-like	1	1
Translational machinery components	Coiled-coil domain of nucleotide exchange factor GrpE	1	1
Galactose-binding domain-like	Methyl-accepting chemotaxis protein (MCP) signaling domain	1	1
WGR domain-like	ENTH/VHS domain	1	1
Tudor/PWWP/MBT	HIT/MYND zinc finger-like	1	1
Hypothetical protein PA1324	Carboxypeptidase regulatory domain-like	1	1
EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain	EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain	1	1
t-snare proteins	SNARE fusion complex	1	1
L domain-like	P-loop containing nucleoside triphosphate hydrolases	1	1
RING/U-box	Concanavalin A-like lectins/glucanases	1	1
Cysteine proteinases	Galactose-binding domain-like	1	1
DNase I-like	GTPase activation domain, GAP	1	1
RING/U-box	MFS general substrate transporter	1	1
Acetyl-CoA synthetase-like	Acetyl-CoA synthetase-like	1	1
GAT-like domain	Clathrin adaptor appendage domain	1	1
Spectrin repeat	SH3-domain	1	1
Acyl-CoA N-acyltransferases (Nat)	Bromodomain	1	1
Flavoproteins	Riboflavin synthase domain-like	1	1
P-loop containing nucleoside triphosphate hydrolases	eIF4e-like	1	1
PreATP-grasp domain	Single hybrid motif	1	1
Ankyrin repeat	L domain-like	1	1
Trimeric LpxA-like enzymes	ARM repeat	1	1
P-loop containing nucleoside triphosphate hydrolases	Multidrug efflux transporter AcrB transmembrane domain	1	1
eIF2alpha middle domain-like	eIF-2-alpha, C-terminal domain	1	1
GAF domain-like	GAF domain-like	1	1
FYVE/PHD zinc finger	SAICAR synthase-like	1	1
RING/U-box	Regulator of G-protein signaling, RGS	1	1
Mib/herc2 domain-like	Ankyrin repeat	1	1
Chaperone J-domain	E set domains	1	1
MIR domain	EF-hand	1	1
FYVE/PHD zinc finger	"Winged helix" DNA-binding domain	1	1
(Phosphotyrosine protein) phosphatases II	Chaperone J-domain	1	1
Thioredoxin-like	FAD/NAD(P)-binding domain	1	1
Fibronectin type III	SH3-domain	1	1
Rap30/74 interaction domains	"Winged helix" DNA-binding domain	1	1
RUN domain-like	Lipase/lipooxygenase domain (PLAT/LH2 domain)	1	1
t-snare proteins	Nucleotidylyl transferase	1	1
Thiamin pyrophosphokinase, catalytic domain	Thiamin pyrophosphokinase, substrate-binding domain	1	1
(Phosphotyrosine protein) phosphatases II	FYVE/PHD zinc finger	1	1
tRNA-binding arm	Class II aaRS and biotin synthetases	1	1
Polo-box domain	WD40 repeat-like	1	1
FAD-dependent thiol oxidase	Sm-like ribonucleoproteins	1	1
Rad51 N-terminal domain-like	P-loop containing nucleoside triphosphate hydrolases	1	1
SMAD/FHA domain	Elongation factor TFIIS domain 2	1	1
BPTI-like	Tricorn protease domain 2	1	1
Flavoproteins	Ferredoxin reductase-like, C-terminal NADP-linked domain	1	1
CCCH zinc finger	RING/U-box	1	1
Pseudouridine synthase	PUA domain-like	1	1
Ankyrin repeat	SAM/Pointed domain	1	1
Domain of poly(ADP-ribose) polymerase	ENTH/VHS domain	1	1
FAD/NAD(P)-binding domain	EF-hand	1	1
dsRNA-binding domain-like	P-loop containing nucleoside triphosphate hydrolases	1	1
Arginase/deacetylase	RING/U-box	1	1
UBA-like	Elongation factor Ts (EF-Ts), dimerisation domain	1	1
Adenine nucleotide alpha hydrolases-like	Putative DNA-binding domain	1	1
Retrovirus zinc finger-like domains	ISP transmembrane anchor	1	1
Chromo domain-like	Ankyrin repeat	1	1
Translation proteins	Histone-fold	1	1
vWA-like	WD40 repeat-like	1	1
PDZ domain-like	Cysteine-rich domain	1	1
Cysteine proteinases	Proton glutamate symport protein	1	1
S-adenosyl-L-methionine-dependent methyltransferases	Putative methyltransferase TM0872, insert domain	1	1
TROVE domain-like	P-loop containing nucleoside triphosphate hydrolases	1	1
BAR/IMD domain-like	SH2 domain	1	1
N-terminal domain of cbl (N-cbl)	SH2 domain	1	1
GroEL apical domain-like	UDP-Glycosyltransferase/glycogen phosphorylase	1	1
Metalloproteases ("zincins"), catalytic domain	Hemopexin-like domain	1	1
Hedgehog/DD-peptidase	Hedgehog/intein (Hint) domain	1	1
Translational machinery components	Head domain of nucleotide exchange factor GrpE	1	1
p53-like transcription factors	DNA-binding protein LAG-1 (CSL)	1	1
FAD/NAD(P)-binding domain	Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain	1	1
Fibronectin type III	Ankyrin repeat	1	1
Thioredoxin-like	Cysteine proteinases	1	1
GFP-like	Growth factor receptor domain	1	1
Protein kinase-like (PK-like)	A DNA-binding domain in eukaryotic transcription factors	1	1
PLP-dependent transferases	ARM repeat	1	1
MurD-like peptide ligases, catalytic domain	MurD-like peptide ligases, peptide-binding domain	1	1
CCCH zinc finger	ISP transmembrane anchor	1	1
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex	CoA-dependent acyltransferases	1	1
Epsilon subunit of F1F0-ATP synthase N-terminal domain	Epsilon subunit of F1F0-ATP synthase C-terminal domain	1	1
FYSH domain	Hypothetical protein AF0491, middle domain	1	1
HMA, heavy metal-associated domain	HMA, heavy metal-associated domain	1	1
Lipoxigenase	Lipoxigenase	1	1
CAD & PB1 domains	PDZ domain-like	1	1
Glucocorticoid receptor-like (DNA-binding domain)	Ribokinase-like	1	1
L domain-like	EGF/Laminin	1	1
IP3 receptor type 1 binding core, domain 2	EF-hand	1	1
Plakin repeat	GAS2 domain-like	1	1
ARM repeat	L domain-like	1	1
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain	Nucleotidylyl transferase	1	1
WD40 repeat-like	LanC-like	1	1
GFP-like	EGF/Laminin	1	1
Composite domain of metallo-dependent hydrolases	Composite domain of metallo-dependent hydrolases	1	1
Succinyl-CoA synthetase domains	Citrate synthase	1	1
WD40 repeat-like	C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase	1	1
P-loop containing nucleoside triphosphate hydrolases	EGF/Laminin	1	1
Trefoil	Galactose mutarotase-like	1	1
GckA/TtuD-like	GckA/TtuD-like	1	1
Spectrin repeat	GAS2 domain-like	1	1
DNA repair protein MutS, domain III	DNA repair protein MutS, domain III	1	1
FAD/NAD(P)-binding domain	Calponin-homology domain, CH-domain	1	1
Ankyrin repeat	RNI-like	1	1
alpha-ketoacid dehydrogenase kinase, N-terminal domain	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase	1	1
Plexin repeat	GTPase activation domain, GAP	1	1
DUSP-like	DUSP-like	1	1
Trefoil	(Trans)glycosidases	1	1
N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1	Translational machinery components	1	1
Kelch motif	Alpha-L RNA-binding motif	1	1
N-terminal nucleophile aminohydrolases (Ntn hydrolases)	Adenine nucleotide alpha hydrolases-like	1	1
RNase III domain-like	dsRNA-binding domain-like	1	1
TSP-1 type 1 repeat	Growth factor receptor domain	1	1
PX domain	Protein kinase-like (PK-like)	1	1
Nucleotide-binding domain	Nucleotide-binding domain	1	1
L27 domain	SH3-domain	1	1
PH domain-like	(Phosphotyrosine protein) phosphatases II	1	1
Regulator of G-protein signaling, RGS	Nucleic acid-binding proteins	1	1
Supernatant protein factor (SPF), C-terminal domain	NAD(P)-binding Rossmann-fold domains	1	1
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase	Type II DNA topoisomerase	1	1
SH2 domain	Isochorismatase-like hydrolases	1	1
Ankyrin repeat	ADP-ribosylation	1	1
P-loop containing nucleoside triphosphate hydrolases	Metallo-dependent phosphatases	1	1
RING/U-box	Chaperone J-domain	1	1
Regulator of G-protein signaling, RGS	Cysteine-rich domain	1	1
Metalloproteases ("zincins"), catalytic domain	TSP-1 type 1 repeat	1	1
UBC-like	Protein kinase-like (PK-like)	1	1
Trefoil	Glycosyl hydrolase domain	1	1
Annexin	Annexin	1	1
Cytochrome b5-like heme/steroid binding domain	Riboflavin synthase domain-like	1	1
Prokaryotic ribosomal protein L17	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	1	1
Kringle-like	Kringle-like	1	1
Ribosomal protein L7/12, oligomerisation (N-terminal) domain	ClpS-like	1	1
Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain	Pyrimidine nucleoside phosphorylase C-terminal domain	1	1
Eukaryotic type KH-domain (KH-domain type I)	LigT-like	1	1
PH domain-like	Putative isomerase YbhE	1	1
ENTH/VHS domain	FYVE/PHD zinc finger	1	1
RNA-binding domain, RBD	Regulator of G-protein signaling, RGS	1	1
Actin-crosslinking proteins	Actin-crosslinking proteins	1	1
EF-hand	TSP-1 type 1 repeat	1	1
Protein kinase-like (PK-like)	FYVE/PHD zinc finger	1	1
Metallo-hydrolase/oxidoreductase	Metallo-hydrolase/oxidoreductase	1	1
GST C-terminal domain-like	Class II aaRS ABD-related	1	1
Glucocorticoid receptor-like (DNA-binding domain)	RNA-binding domain, RBD	1	1
YWTD domain	LDL receptor-like module	1	1
TPR-like	Band 7/SPFH domain	1	1
NagB/RpiA/CoA transferase-like	D-ribose-5-phosphate isomerase (RpiA), lid domain	1	1
B-box zinc-binding domain	Fibronectin type III	1	1
HAND domain of the nucleosome remodeling ATPase ISWI	Homeodomain-like	1	1
2Fe-2S ferredoxin-like	Formate dehydrogenase/DMSO reductase, domains 1-3	1	1
L domain-like	DNase I-like	1	1
SNARE fusion complex	RING/U-box	1	1
Ubiquitin-like	Ran binding protein zinc finger-like	1	1
Seven-hairpin glycosidases	PA domain	1	1
EGF/Laminin	TB module/8-cys domain	1	1
FYVE/PHD zinc finger	Chromo domain-like	1	1
WW domain	RING/U-box	1	1
Tricorn protease domain 2	WD40 repeat-like	1	1
SNARE-like	Domain of the SRP/SRP receptor G-proteins	1	1
BRCT domain	Lesion bypass DNA polymerase (Y-family), little finger domain	1	1
beta-beta-alpha zinc fingers	FYVE/PHD zinc finger	1	1
L domain-like	Heme-dependent peroxidases	1	1
DEATH domain	P-loop containing nucleoside triphosphate hydrolases	1	1
FYVE/PHD zinc finger	PDZ domain-like	1	1
Nucleoside diphosphate kinase, NDK	Nucleoside diphosphate kinase, NDK	1	1
Protein kinase-like (PK-like)	(Phosphotyrosine protein) phosphatases II	1	1
Phosphofructokinase	Phosphofructokinase	1	1
Plakin repeat	Plakin repeat	1	1
EF-hand	Translation proteins SH3-like domain	1	1
Tetraspanin	EF-hand	1	1
Cation efflux protein cytoplasmic domain-like	Homeodomain-like	1	1
Kelch motif	Fibronectin type III	1	1
Glucocorticoid receptor-like (DNA-binding domain)	ADP-ribosylation	1	1
Cadherin-like	EGF/Laminin	1	1
Ribosomal protein L6	Ribosomal protein L6	1	1
DBL homology domain (DH-domain)	C2 domain (Calcium/lipid-binding domain, CaLB)	1	1
Elongation factor TFIIS domain 2	Zinc beta-ribbon	1	1
4Fe-4S ferredoxins	P-loop containing nucleoside triphosphate hydrolases	1	1
Supernatant protein factor (SPF), C-terminal domain	Immunoglobulin	1	1
ADP-ribosylation	ENTH/VHS domain	1	1
RNA-binding domain, RBD	Tryptophan synthase beta subunit-like PLP-dependent enzymes	1	1
Saposin	Saposin	1	1
beta-Galactosidase/glucuronidase domain	(Trans)glycosidases	1	1
Metallo-dependent phosphatases	Thiamin diphosphate-binding fold (THDP-binding)	1	1
MAST3 pre-PK domain-like	Protein kinase-like (PK-like)	1	1
Translational machinery components	alpha/beta-Hydrolases	1	1