Domain combination pairs in Hymenolepis microstoma

All pairs of domain combinations at the superfamily level are listed here.
The identification of domain pairs does not account for the possibility of non-contiguous domains. Inserted, or interlaced, domains are seen as having a simple pair ordering.

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Domain combination pairs

1500 domain combination pairs.
Click on a column heading to sort that column, or the 'View' button to see domain architetures for that domain pair combination.

Superfamily (N)	Superfamily (C)	Number of occurrances	Number unique
beta-beta-alpha zinc fingers	beta-beta-alpha zinc fingers	75	24
P-loop containing nucleoside triphosphate hydrolases	P-loop containing nucleoside triphosphate hydrolases	69	38
RNA-binding domain, RBD	RNA-binding domain, RBD	45	24
Immunoglobulin	Immunoglobulin	40	34
Cadherin-like	Cadherin-like	38	23
Actin-like ATPase domain	Actin-like ATPase domain	30	12
Tubulin nucleotide-binding domain-like	Tubulin C-terminal domain-like	24	4
POZ domain	Kelch motif	24	9
EGF/Laminin	EGF/Laminin	24	21
ARM repeat	ARM repeat	23	14
DNA/RNA polymerases	Ribonuclease H-like	22	11
C2 domain (Calcium/lipid-binding domain, CaLB)	C2 domain (Calcium/lipid-binding domain, CaLB)	21	9
Second domain of FERM	PH domain-like	20	15
Fibronectin type III	Fibronectin type III	20	17
WD40 repeat-like	WD40 repeat-like	18	12
TPR-like	TPR-like	18	11
SH3-domain	SH2 domain	17	10
PDZ domain-like	PDZ domain-like	17	15
Immunoglobulin	Fibronectin type III	16	15
SH3-domain	Protein kinase-like (PK-like)	16	8
Glucocorticoid receptor-like (DNA-binding domain)	Glucocorticoid receptor-like (DNA-binding domain)	16	12
SH2 domain	Protein kinase-like (PK-like)	16	9
HAD-like	Calcium ATPase, transmembrane domain M	15	6
Ypt/Rab-GAP domain of gyp1p	Ypt/Rab-GAP domain of gyp1p	15	9
Calcium ATPase, transduction domain A	Calcium ATPase, transmembrane domain M	15	6
EF-hand	EF-hand	15	9
Ubiquitin-like	Second domain of FERM	15	11
Metal cation-transporting ATPase, ATP-binding domain N	HAD-like	14	5
Ubiquitin-like	PH domain-like	14	9
Protein kinase-like (PK-like)	Protein kinase-like (PK-like)	14	8
Calcium ATPase, transduction domain A	Metal cation-transporting ATPase, ATP-binding domain N	14	5
Calcium ATPase, transduction domain A	HAD-like	14	5
Metal cation-transporting ATPase, ATP-binding domain N	Calcium ATPase, transmembrane domain M	14	5
FYVE/PHD zinc finger	FYVE/PHD zinc finger	14	14
P-loop containing nucleoside triphosphate hydrolases	Translation proteins	13	10
Cyclin-like	Cyclin-like	13	8
Growth factor receptor domain	Growth factor receptor domain	13	13
Ubiquitin-like	Ubiquitin-like	13	7
ARM repeat	Protein kinase-like (PK-like)	13	11
Nicotinic receptor ligand binding domain-like	Neurotransmitter-gated ion-channel transmembrane pore	12	6
Ankyrin repeat	Ankyrin repeat	12	10
PH domain-like	PH domain-like	12	11
Spectrin repeat	Spectrin repeat	12	11
DBL homology domain (DH-domain)	PH domain-like	11	11
RING/U-box	RING/U-box	11	9
ABC transporter transmembrane region	P-loop containing nucleoside triphosphate hydrolases	11	8
Voltage-gated potassium channels	Voltage-gated potassium channels	11	8
GroEL equatorial domain-like	GroEL-intermediate domain like	10	1
GroEL-intermediate domain like	GroEL apical domain-like	10	1
GroEL equatorial domain-like	GroEL apical domain-like	10	1
Cullin repeat-like	Cullin homology domain	10	4
POZ domain	Voltage-gated potassium channels	10	3
SH3-domain	SH3-domain	10	10
Thioredoxin-like	GST C-terminal domain-like	10	3
Eukaryotic type KH-domain (KH-domain type I)	Eukaryotic type KH-domain (KH-domain type I)	10	8
EF-hand	DLC	9	2
L domain-like	L domain-like	9	9
Cullin homology domain	"Winged helix" DNA-binding domain	9	4
Glucocorticoid receptor-like (DNA-binding domain)	Nuclear receptor ligand-binding domain	9	6
Nucleic acid-binding proteins	P-loop containing nucleoside triphosphate hydrolases	9	2
PH domain-like	SH2 domain	8	8
Transducin (alpha subunit), insertion domain	P-loop containing nucleoside triphosphate hydrolases	8	2
Nucleotidylyl transferase	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	8	6
Voltage-gated potassium channels	cAMP-binding domain-like	8	5
BPTI-like	BPTI-like	8	7
Calponin-homology domain, CH-domain	Spectrin repeat	8	7
SH3-domain	P-loop containing nucleoside triphosphate hydrolases	8	7
Acid proteases	DNA/RNA polymerases	8	3
Homeodomain-like	Homeodomain-like	8	8
Cullin repeat-like	"Winged helix" DNA-binding domain	8	3
MFS general substrate transporter	MFS general substrate transporter	8	5
Concanavalin A-like lectins/glucanases	Concanavalin A-like lectins/glucanases	8	8
EGF/Laminin	Growth factor receptor domain	8	8
Nucleic acid-binding proteins	Nucleic acid-binding proteins	7	5
cAMP-binding domain-like	cAMP-binding domain-like	7	6
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase	Ribosomal protein S5 domain 2-like	7	7
L domain-like	Immunoglobulin	7	2
NAD(P)-binding Rossmann-fold domains	6-phosphogluconate dehydrogenase C-terminal domain-like	7	4
Cysteine-rich domain	Protein kinase-like (PK-like)	7	7
Nucleotidyltransferase	PAP/OAS1 substrate-binding domain	7	4
FYVE/PHD zinc finger	Bromodomain	7	7
Periplasmic binding protein-like I	Periplasmic binding protein-like II	7	6
lambda repressor-like DNA-binding domains	Homeodomain-like	7	4
Chromo domain-like	Chromo domain-like	7	5
NAD(P)-binding Rossmann-fold domains	LDH C-terminal domain-like	7	2
(Phosphotyrosine protein) phosphatases II	(Phosphotyrosine protein) phosphatases II	7	7
C2 domain (Calcium/lipid-binding domain, CaLB)	Protein kinase-like (PK-like)	6	6
Voltage-gated potassium channels	Periplasmic binding protein-like II	6	5
PDZ domain-like	SH3-domain	6	6
HSP40/DnaJ peptide-binding domain	HSP40/DnaJ peptide-binding domain	6	5
DNA repair protein MutS, domain III	P-loop containing nucleoside triphosphate hydrolases	6	4
TSP-1 type 1 repeat	TSP-1 type 1 repeat	6	6
BRCT domain	BRCT domain	6	6
Thioredoxin-like	Thioredoxin-like	6	5
Leukotriene A4 hydrolase N-terminal domain	Metalloproteases ("zincins"), catalytic domain	6	3
PK beta-barrel domain-like	Phosphoenolpyruvate/pyruvate domain	6	3
C-type lectin-like	C-type lectin-like	6	3
LuxS/MPP-like metallohydrolase	LuxS/MPP-like metallohydrolase	6	3
Cysteine proteinases	Calpain large subunit, middle domain (domain III)	6	5
ABC transporter transmembrane region	ABC transporter transmembrane region	6	5
FYVE/PHD zinc finger	RING/U-box	6	6
Immunoglobulin	Protein kinase-like (PK-like)	6	5
PDZ domain-like	P-loop containing nucleoside triphosphate hydrolases	6	6
Fibronectin type III	(Phosphotyrosine protein) phosphatases II	6	6
EGF/Laminin	TSP-1 type 1 repeat	6	4
LDL receptor-like module	LDL receptor-like module	6	6
BAR/IMD domain-like	SH3-domain	6	4
F-box domain	WD40 repeat-like	6	5
Aminoacid dehydrogenase-like, N-terminal domain	NAD(P)-binding Rossmann-fold domains	5	2
Periplasmic binding protein-like I	Voltage-gated potassium channels	5	4
Cysteine-rich domain	Cysteine-rich domain	5	5
Spectrin repeat	PH domain-like	5	5
P-loop containing nucleoside triphosphate hydrolases	WD40 repeat-like	5	5
TPR-like	SET domain	5	3
SH2 domain	SH2 domain	5	4
Phospholipase D/nuclease	Phospholipase D/nuclease	5	4
L domain-like	Growth factor receptor domain	5	5
P-loop containing nucleoside triphosphate hydrolases	post-AAA+ oligomerization domain-like	5	2
Protein kinase-like (PK-like)	PH domain-like	5	5
PK beta-barrel domain-like	PK C-terminal domain-like	5	2
Actin-like ATPase domain	Heat shock protein 70kD (HSP70), peptide-binding domain	5	3
Ankyrin repeat	Protein kinase-like (PK-like)	5	5
L domain-like	Protein kinase-like (PK-like)	5	5
ValRS/IleRS/LeuRS editing domain	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	5	3
"Winged helix" DNA-binding domain	"Winged helix" DNA-binding domain	5	4
Spectrin repeat	EF-hand	5	4
Formate/glycerate dehydrogenase catalytic domain-like	NAD(P)-binding Rossmann-fold domains	5	3
Phosphoenolpyruvate/pyruvate domain	PK C-terminal domain-like	5	2
Growth factor receptor domain	Protein kinase-like (PK-like)	5	5
P-loop containing nucleoside triphosphate hydrolases	EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain	5	3
CRAL/TRIO N-terminal domain	CRAL/TRIO domain	5	4
Bromodomain	Bromodomain	5	4
Translation proteins	EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain	5	3
P-loop containing nucleoside triphosphate hydrolases	Ribosomal protein S5 domain 2-like	5	4
Fibronectin type III	Protein kinase-like (PK-like)	5	5
Translation proteins	EF-G C-terminal domain-like	5	4
Actin-like ATPase domain	Heat shock protein 70kD (HSP70), C-terminal subdomain	5	3
ARM repeat	WD40 repeat-like	5	5
SAM/Pointed domain	SAM/Pointed domain	5	5
EF-G C-terminal domain-like	EF-G C-terminal domain-like	5	4
P-loop containing nucleoside triphosphate hydrolases	Ankyrin repeat	5	5
PH domain-like	SH3-domain	5	5
Metalloproteases ("zincins"), catalytic domain	Blood coagulation inhibitor (disintegrin)	5	2
P-loop containing nucleoside triphosphate hydrolases	EF-G C-terminal domain-like	5	4
Chaperone J-domain	HSP40/DnaJ peptide-binding domain	5	4
Glucocorticoid receptor-like (DNA-binding domain)	Homeodomain-like	5	4
ValRS/IleRS/LeuRS editing domain	Nucleotidylyl transferase	5	3
E set domains	E set domains	5	5
CBS-domain pair	CBS-domain pair	4	3
ENTH/VHS domain	GAT-like domain	4	4
F-box domain	RNI-like	4	3
P-loop containing nucleoside triphosphate hydrolases	Sec63 N-terminal domain-like	4	4
beta-sandwich domain of Sec23/24	vWA-like	4	3
RING/U-box	B-box zinc-binding domain	4	4
P-loop containing nucleoside triphosphate hydrolases	"Winged helix" DNA-binding domain	4	4
NAD(P)-binding Rossmann-fold domains	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain	4	2
PIN domain-like	5' to 3' exonuclease, C-terminal subdomain	4	4
Cysteine proteinases	EF-hand	4	3
(Trans)glycosidases	Glycosyl hydrolase domain	4	4
HSP20-like chaperones	HSP20-like chaperones	4	1
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase	HSP90 C-terminal domain	4	4
RING/U-box	WD40 repeat-like	4	4
Ribosomal protein S5 domain 2-like	GHMP Kinase, C-terminal domain	4	3
Translation proteins	Ribosomal protein S5 domain 2-like	4	3
Riboflavin synthase domain-like	Ferredoxin reductase-like, C-terminal NADP-linked domain	4	4
Glutathione synthetase ATP-binding domain-like	Succinyl-CoA synthetase domains	4	2
POZ domain	Skp1 dimerisation domain-like	4	2
Integrin alpha N-terminal domain	Integrin domains	4	3
DNA ligase/mRNA capping enzyme, catalytic domain	Nucleic acid-binding proteins	4	4
Heat shock protein 70kD (HSP70), peptide-binding domain	Heat shock protein 70kD (HSP70), C-terminal subdomain	4	2
Protein kinase-like (PK-like)	KA1-like	4	3
DNA/RNA polymerases	Lesion bypass DNA polymerase (Y-family), little finger domain	4	2
TAZ domain	Kix domain of CBP (creb binding protein)	4	3
C2 domain (Calcium/lipid-binding domain, CaLB)	Cysteine-rich domain	4	3
Calponin-homology domain, CH-domain	PH domain-like	4	4
PH domain-like	Concanavalin A-like lectins/glucanases	4	4
Myosin rod fragments	Myosin rod fragments	4	4
SNARE-like	Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor	4	2
EGF/Laminin	Concanavalin A-like lectins/glucanases	4	4
PH domain-like	BEACH domain	4	4
Calponin-homology domain, CH-domain	EF-hand	4	3
GroES-like	NAD(P)-binding Rossmann-fold domains	4	3
Sec7 domain	PH domain-like	4	2
Protein kinase-like (PK-like)	Nucleotide cyclase	4	4
EF-G C-terminal domain-like	Ribosomal protein S5 domain 2-like	4	3
Concanavalin A-like lectins/glucanases	P-domain of calnexin/calreticulin	4	2
Chromo domain-like	P-loop containing nucleoside triphosphate hydrolases	4	4
Protein kinase-like (PK-like)	P-loop containing nucleoside triphosphate hydrolases	4	4
Zn-finger domain of Sec23/24	vWA-like	4	3
P-loop containing nucleoside triphosphate hydrolases	Smc hinge domain	4	3
Kelch motif	Kelch motif	4	3
FAD/NAD(P)-binding domain	FAD-linked reductases, C-terminal domain	4	4
FYVE/PHD zinc finger	P-loop containing nucleoside triphosphate hydrolases	4	4
Ribosomal protein S5 domain 2-like	HSP90 C-terminal domain	4	4
Ubiquitin-like	Protein kinase-like (PK-like)	4	4
Class II aaRS and biotin synthetases	Class II aaRS ABD-related	4	4
BEACH domain	WD40 repeat-like	4	4
HMG-box	HMG-box	4	2
UBC-like	RING/U-box	4	4
SMAD MH1 domain	SMAD/FHA domain	4	3
Domain of poly(ADP-ribose) polymerase	ADP-ribosylation	4	4
beta-sandwich domain of Sec23/24	Zn-finger domain of Sec23/24	4	3
Subtilisin-like	Galactose-binding domain-like	4	3
WW domain	WW domain	4	4
DBL homology domain (DH-domain)	SH3-domain	4	4
Thioredoxin-like	Ubiquitin-like	3	2
TAZ domain	RING/U-box	3	3
GTPase activation domain, GAP	SH2 domain	3	3
cAMP-binding domain-like	Protein kinase-like (PK-like)	3	2
Ribosomal protein S5 domain 2-like	Ribonuclease PH domain 2-like	3	2
Nucleotide-diphospho-sugar transferases	Ricin B-like lectins	3	1
Actin depolymerizing proteins	Actin depolymerizing proteins	3	3
Spermadhesin, CUB domain	Spermadhesin, CUB domain	3	3
vWA-like	C-terminal, gelsolin-like domain of Sec23/24	3	2
Translation proteins SH3-like domain	Nucleic acid-binding proteins	3	3
Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain	Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain	3	3
Multidrug efflux transporter AcrB transmembrane domain	Multidrug efflux transporter AcrB transmembrane domain	3	3
P-loop containing nucleoside triphosphate hydrolases	EF-hand	3	3
PH domain-like	Oxysterol-binding protein-like	3	2
ATP-dependent DNA ligase DNA-binding domain	Nucleic acid-binding proteins	3	3
ThrRS/AlaRS common domain	Class II aaRS and biotin synthetases	3	2
Creatinase/aminopeptidase	"Winged helix" DNA-binding domain	3	2
Phosphoglucomutase, first 3 domains	Phosphoglucomutase, first 3 domains	3	3
Intermediate filament protein, coiled coil region	Intermediate filament protein, coiled coil region	3	2
TAZ domain	TAZ domain	3	3
ArfGap/RecO-like zinc finger	PH domain-like	3	3
PriA/YqbF domain	GINS helical bundle-like	3	2
Clc chloride channel	CBS-domain pair	3	2
HLH, helix-loop-helix DNA-binding domain	PYP-like sensor domain (PAS domain)	3	3
ARM repeat	PH domain-like	3	3
vWA-like	Helical domain of Sec23/24	3	2
ARM repeat	Toll/Interleukin receptor TIR domain	3	3
FKBP-like	TPR-like	3	2
Bromodomain	RING/U-box	3	3
ArfGap/RecO-like zinc finger	Ankyrin repeat	3	3
PH domain-like	WD40 repeat-like	3	3
Immunoglobulin	LDL receptor-like module	3	3
CoA-dependent acyltransferases	CoA-dependent acyltransferases	3	2
Intermediate filament protein, coiled coil region	Lamin A/C globular tail domain	3	2
WD40 repeat-like	Protein kinase-like (PK-like)	3	3
P-loop containing nucleoside triphosphate hydrolases	TGS-like	3	1
EF-hand	RING/U-box	3	3
Zn-finger domain of Sec23/24	C-terminal, gelsolin-like domain of Sec23/24	3	2
Phosphoglucomutase, first 3 domains	Phosphoglucomutase, C-terminal domain	3	3
FYVE/PHD zinc finger	C2 domain (Calcium/lipid-binding domain, CaLB)	3	2
Toll/Interleukin receptor TIR domain	SAM/Pointed domain	3	3
ARM repeat	SAM/Pointed domain	3	3
Terpenoid cyclases/Protein prenyltransferases	Alpha-macroglobulin receptor domain	3	2
Cysteine proteinases	Cysteine proteinases	3	3
N-terminal domain of alpha and beta subunits of F1 ATP synthase	P-loop containing nucleoside triphosphate hydrolases	3	2
Calpain large subunit, middle domain (domain III)	EF-hand	3	2
dsRNA-binding domain-like	dsRNA-binding domain-like	3	3
Galactose-binding domain-like	Growth factor receptor domain	3	2
Growth factor receptor domain	Fibronectin type III	3	3
CCCH zinc finger	CCCH zinc finger	3	3
FYVE/PHD zinc finger	Tudor/PWWP/MBT	3	3
SNARE fusion complex	SNARE fusion complex	3	3
DPP6 N-terminal domain-like	alpha/beta-Hydrolases	3	3
L27 domain	PDZ domain-like	3	3
Ankyrin repeat	DEATH domain	3	3
RCC1/BLIP-II	Hect, E3 ligase catalytic domain	3	2
FYVE/PHD zinc finger	Clavaminate synthase-like	3	2
Enolase N-terminal domain-like	Enolase C-terminal domain-like	3	1
TAZ domain	Bromodomain	3	3
RNA-binding domain, RBD	PABC (PABP) domain	3	3
ATP-dependent DNA ligase DNA-binding domain	DNA ligase/mRNA capping enzyme, catalytic domain	3	3
P-loop containing nucleoside triphosphate hydrolases	C-terminal domain of alpha and beta subunits of F1 ATP synthase	3	2
P-loop containing nucleoside triphosphate hydrolases	FtsH protease domain-like	3	1
Thiolase-like	Thiolase-like	3	2
Retrovirus zinc finger-like domains	Retrovirus zinc finger-like domains	3	3
Myosin rod fragments	Tropomyosin	3	3
Helical domain of Sec23/24	C-terminal, gelsolin-like domain of Sec23/24	3	2
Insert subdomain of RNA polymerase alpha subunit	RBP11-like subunits of RNA polymerase	3	2
Ankyrin repeat	PDZ domain-like	3	1
Cysteine-rich domain	GTPase activation domain, GAP	3	3
P-loop containing nucleoside triphosphate hydrolases	RING/U-box	3	3
ARID-like	FYVE/PHD zinc finger	3	2
Metallo-dependent hydrolases	Composite domain of metallo-dependent hydrolases	3	3
DLC	DLC	3	2
RNase III domain-like	RNase III domain-like	3	2
P-loop containing nucleoside triphosphate hydrolases	E set domains	3	3
RING/U-box	TRAF domain-like	3	3
beta-sandwich domain of Sec23/24	Helical domain of Sec23/24	3	2
FYVE/PHD zinc finger	SET domain	3	3
TPR-like	HCP-like	3	3
Tropomyosin	Tropomyosin	3	2
Sec63 N-terminal domain-like	E set domains	3	3
RING/U-box	Cysteine proteinases	3	3
PreATP-grasp domain	Glutathione synthetase ATP-binding domain-like	3	3
ARM repeat	Clathrin adaptor appendage domain	3	3
Ribonuclease H-like	Ribonuclease H-like	3	3
6-phosphogluconate dehydrogenase C-terminal domain-like	UDP-glucose/GDP-mannose dehydrogenase C-terminal domain	3	3
P-loop containing nucleoside triphosphate hydrolases	PH domain-like	3	3
ARID-like	Clavaminate synthase-like	3	2
Calponin-homology domain, CH-domain	GAS2 domain-like	3	3
PDZ domain-like	PH domain-like	3	3
C2 domain (Calcium/lipid-binding domain, CaLB)	GTPase activation domain, GAP	3	2
TATA-box binding protein-like	TATA-box binding protein-like	3	3
N-terminal domain of alpha and beta subunits of F1 ATP synthase	C-terminal domain of alpha and beta subunits of F1 ATP synthase	3	2
beta-sandwich domain of Sec23/24	C-terminal, gelsolin-like domain of Sec23/24	3	2
Zn-finger domain of Sec23/24	Helical domain of Sec23/24	3	2
PAZ domain	Ribonuclease H-like	3	2
NAD(P)-binding Rossmann-fold domains	UDP-glucose/GDP-mannose dehydrogenase C-terminal domain	3	3
FAS1 domain	FAS1 domain	3	3
Chromo domain-like	Acyl-CoA N-acyltransferases (Nat)	2	2
SH2 domain	(Phosphotyrosine protein) phosphatases II	2	1
Tudor/PWWP/MBT	SAM/Pointed domain	2	2
P-loop containing nucleoside triphosphate hydrolases	HAD-like	2	2
C2 domain (Calcium/lipid-binding domain, CaLB)	EGF/Laminin	2	1
"Winged helix" DNA-binding domain	E set domains	2	2
Multidrug resistance efflux transporter EmrE	Multidrug resistance efflux transporter EmrE	2	2
Ubiquitin-like	DBL homology domain (DH-domain)	2	2
Calponin-homology domain, CH-domain	E set domains	2	2
Bromodomain	HIT/MYND zinc finger-like	2	2
WW domain	GTPase activation domain, GAP	2	2
BAR/IMD domain-like	GTPase activation domain, GAP	2	2
RNI-like	ARM repeat	2	2
Ubiquitin-like	PDZ domain-like	2	2
SH3-domain	Isochorismatase-like hydrolases	2	2
Ankyrin repeat	Hect, E3 ligase catalytic domain	2	2
Galactose-binding domain-like	Galactose-binding domain-like	2	2
Chaperone J-domain	Homeodomain-like	2	2
Subtilisin-like	Growth factor receptor domain	2	1
Ubiquitin-like	Cysteine-rich domain	2	2
beta-N-acetylhexosaminidase-like domain	(Trans)glycosidases	2	2
CRAL/TRIO domain	Supernatant protein factor (SPF), C-terminal domain	2	1
P-loop containing nucleoside triphosphate hydrolases	Myosin rod fragments	2	2
DNA repair protein MutS, domain II	P-loop containing nucleoside triphosphate hydrolases	2	1
Protein kinase-like (PK-like)	Polo-box domain	2	2
ARM repeat	Formin homology 2 domain (FH2 domain)	2	2
P-loop containing nucleoside triphosphate hydrolases	TPR-like	2	2
Galactose-binding domain-like	(Trans)glycosidases	2	2
Ypt/Rab-GAP domain of gyp1p	Rhodanese/Cell cycle control phosphatase	2	2
beta-beta-alpha zinc fingers	Homeodomain-like	2	2
Chaperone J-domain	Thioredoxin-like	2	1
Ran binding protein zinc finger-like	Ran binding protein zinc finger-like	2	2
Cysteine-rich DNA binding domain, (DM domain)	Cysteine-rich DNA binding domain, (DM domain)	2	2
vWA-like	SPOC domain-like	2	2
FYVE/PHD zinc finger	Homeodomain-like	2	2
Nucleotidylyl transferase	Nucleotidylyl transferase	2	2
ADC-like	Cdc48 domain 2-like	2	1
PDZ domain-like	"Winged helix" DNA-binding domain	2	2
A middle domain of Talin 1	I/LWEQ domain	2	2
PH domain-like	FYVE/PHD zinc finger	2	2
HAD-like	Cysteine proteinases	2	2
Nicotinic receptor ligand binding domain-like	Nicotinic receptor ligand binding domain-like	2	2
PH domain-like	Ankyrin repeat	2	2
Creatinase/prolidase N-terminal domain	Creatinase/aminopeptidase	2	2
NagB/RpiA/CoA transferase-like	NagB/RpiA/CoA transferase-like	2	1
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)	ThrRS/AlaRS common domain	2	1
RuvA domain 2-like	RuvA domain 2-like	2	2
CRAL/TRIO domain	GTPase activation domain, GAP	2	1
C-type lectin-like	Complement control module/SCR domain	2	1
Arp2/3 complex subunits	Arp2/3 complex subunits	2	2
N-terminal, heterodimerisation domain of RBP7 (RpoE)	Nucleic acid-binding proteins	2	1
SRCR-like	SRCR-like	2	2
Bet v1-like	HAD-like	2	2
WW domain	Hect, E3 ligase catalytic domain	2	2
EF-hand	C2 domain (Calcium/lipid-binding domain, CaLB)	2	2
Nucleotide cyclase	Nucleotide cyclase	2	2
Obg GTP-binding protein N-terminal domain	P-loop containing nucleoside triphosphate hydrolases	2	2
ADC-like	P-loop containing nucleoside triphosphate hydrolases	2	1
PH domain-like	C2 domain (Calcium/lipid-binding domain, CaLB)	2	2
WW domain	FF domain	2	2
P-loop containing nucleoside triphosphate hydrolases	BRK domain-like	2	2
PP2C-like	PP2C-like	2	2
Cdc48 domain 2-like	P-loop containing nucleoside triphosphate hydrolases	2	1
Bromodomain	Tudor/PWWP/MBT	2	2
Kix domain of CBP (creb binding protein)	RING/U-box	2	2
Chaperone J-domain	DnaJ/Hsp40 cysteine-rich domain	2	1
Leukotriene A4 hydrolase N-terminal domain	ARM repeat	2	1
Homeodomain-like	(Phosphotyrosine protein) phosphatases II	2	2
ARM repeat	Sec7 domain	2	2
Second domain of FERM	DBL homology domain (DH-domain)	2	2
PDZ domain-like	Glucocorticoid receptor-like (DNA-binding domain)	2	1
P-loop containing nucleoside triphosphate hydrolases	Tropomyosin	2	2
FF domain	FF domain	2	2
Ubiquitin-like	Concanavalin A-like lectins/glucanases	2	2
Tudor/PWWP/MBT	Tudor/PWWP/MBT	2	2
EGF/Laminin	Ankyrin repeat	2	2
P-loop containing nucleoside triphosphate hydrolases	PRTase-like	2	1
Clathrin adaptor appendage domain	Subdomain of clathrin and coatomer appendage domain	2	2
Nucleic acid-binding proteins	Class II aaRS and biotin synthetases	2	2
alpha-catenin/vinculin-like	alpha-catenin/vinculin-like	2	2
RING/U-box	Ankyrin repeat	2	2
Nucleotide-binding domain	FMN-linked oxidoreductases	2	2
Surp module (SWAP domain)	Surp module (SWAP domain)	2	2
Mib/herc2 domain-like	RING/U-box	2	2
PYP-like sensor domain (PAS domain)	Voltage-gated potassium channels	2	1
RBP11-like subunits of RNA polymerase	RBP11-like subunits of RNA polymerase	2	1
Sema domain	Plexin repeat	2	2
Regulator of G-protein signaling, RGS	Protein kinase-like (PK-like)	2	2
Neurotransmitter-gated ion-channel transmembrane pore	Neurotransmitter-gated ion-channel transmembrane pore	2	2
RCC1/BLIP-II	Chaperone J-domain	2	1
Galactose mutarotase-like	Glycosyl hydrolase domain	2	2
Second domain of FERM	I/LWEQ domain	2	2
Cation efflux protein transmembrane domain-like	Cation efflux protein cytoplasmic domain-like	2	2
Cap-Gly domain	Cap-Gly domain	2	2
TPR-like	Fic-like	2	1
Restriction endonuclease-like	RuvA domain 2-like	2	2
PUA domain-like	P-loop containing nucleoside triphosphate hydrolases	2	2
PH domain-like	A middle domain of Talin 1	2	2
Tudor/PWWP/MBT	HIV integrase-binding domain	2	1
E set domains	AMPKBI-like	2	1
dsRNA-binding domain-like	Ribosomal protein S5 domain 2-like	2	2
Mitochondrial carrier	Mitochondrial carrier	2	1
C2 domain (Calcium/lipid-binding domain, CaLB)	ARM repeat	2	2
Concanavalin A-like lectins/glucanases	BEACH domain	2	2
Nucleotidyltransferase	PAP/Archaeal CCA-adding enzyme, C-terminal domain	2	2
Nucleotide-diphospho-sugar transferases	Trimeric LpxA-like enzymes	2	2
Activating enzymes of the ubiquitin-like proteins	Activating enzymes of the ubiquitin-like proteins	2	2
SAP domain	RNA-binding domain, RBD	2	1
p53-like transcription factors	E set domains	2	2
HAD-like	Calpain large subunit, middle domain (domain III)	2	2
Ubiquitin-like	Cysteine proteinases	2	2
DnaJ/Hsp40 cysteine-rich domain	HSP40/DnaJ peptide-binding domain	2	1
alpha-helical ferredoxin	Nucleotide-binding domain	2	2
SNARE-like	SNARE fusion complex	2	1
Protein prenylyltransferase	Outer arm dynein light chain 1	2	1
Ribonuclease H-like	RuvA domain 2-like	2	2
Sec63 N-terminal domain-like	Sec63 N-terminal domain-like	2	2
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)	Translation proteins	2	1
Thioredoxin-like	Galactose-binding domain-like	2	2
Regulator of G-protein signaling, RGS	Ubiquitin-like	2	2
Ypt/Rab-GAP domain of gyp1p	RUN domain-like	2	2
RNA-binding domain, RBD	Cyclophilin-like	2	2
DNA ligase/mRNA capping enzyme, catalytic domain	BRCT domain	2	2
PAP/OAS1 substrate-binding domain	PAP/Archaeal CCA-adding enzyme, C-terminal domain	2	2
Nucleotidylyl transferase	Ribosomal protein L25-like	2	2
Metallo-dependent phosphatases	FYVE/PHD zinc finger	2	2
Glutaminase/Asparaginase	Ankyrin repeat	2	1
FYVE/PHD zinc finger	B-box zinc-binding domain	2	2
Integrin domains	Integrin domains	2	2
RNA-binding domain, RBD	SPOC domain-like	2	2
DNA repair protein MutS, domain I	P-loop containing nucleoside triphosphate hydrolases	2	1
Ubiquitin-like	BAG domain	2	1
Mib/herc2 domain-like	Mib/herc2 domain-like	2	2
BAR/IMD domain-like	PH domain-like	2	2
WGR domain-like	ADP-ribosylation	2	2
Nucleic acid-binding proteins	Eukaryotic type KH-domain (KH-domain type I)	2	1
SH2 domain	SOCS box-like	2	1
DNA repair protein MutS, domain I	DNA repair protein MutS, domain III	2	1
PH domain-like	Moesin tail domain	2	2
CCCH zinc finger	RNA-binding domain, RBD	2	2
Tex N-terminal region-like	RuvA domain 2-like	2	2
PH domain-like	I/LWEQ domain	2	2
Class II aaRS and biotin synthetases	Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)	2	1
Protein kinase-like (PK-like)	PDZ domain-like	2	2
S-adenosyl-L-methionine-dependent methyltransferases	Ankyrin repeat	2	2
ARM repeat	P-loop containing nucleoside triphosphate hydrolases	2	2
Domain of the SRP/SRP receptor G-proteins	P-loop containing nucleoside triphosphate hydrolases	2	2
Nucleic acid-binding proteins	BRCT domain	2	2
Glucocorticoid receptor-like (DNA-binding domain)	AN1-like Zinc finger	2	2
PYP-like sensor domain (PAS domain)	cAMP-binding domain-like	2	1
DNA repair protein MutS, domain I	DNA repair protein MutS, domain II	2	1
Immunoglobulin	Growth factor receptor domain	2	2
Periplasmic binding protein-like II	Periplasmic binding protein-like II	2	2
Transcription factor IIA (TFIIA), alpha-helical domain	Transcription factor IIA (TFIIA), beta-barrel domain	2	1
Kix domain of CBP (creb binding protein)	Bromodomain	2	2
POZ domain	Galactose oxidase, central domain	2	2
RNA-binding domain, RBD	P-loop containing nucleoside triphosphate hydrolases	2	2
PH domain-like	GTPase activation domain, GAP	2	2
Initiation factor IF2/eIF5b, domain 3	Translation proteins	2	2
"Winged helix" DNA-binding domain	ARM repeat	2	2
Immunoglobulin	EGF/Laminin	2	2
RNI-like	L domain-like	2	2
Families 57/38 glycoside transferase middle domain	Galactose mutarotase-like	2	2
P-loop containing nucleoside triphosphate hydrolases	Nucleotidylyl transferase	2	2
WD40 repeat-like	FYVE/PHD zinc finger	2	2
Translation proteins	ThrRS/AlaRS common domain	2	1
HCP-like	HCP-like	2	2
FYVE/PHD zinc finger	HIT/MYND zinc finger-like	2	2
Acid proteases	Acid proteases	2	1
Concanavalin A-like lectins/glucanases	P-loop containing nucleoside triphosphate hydrolases	2	2
Immunoglobulin	(Phosphotyrosine protein) phosphatases II	2	2
EF-hand	Mitochondrial carrier	2	2
Zinc beta-ribbon	Cyclin-like	2	2
Ras GEF	PH domain-like	2	2
Single hybrid motif	CoA-dependent acyltransferases	2	2
Tex N-terminal region-like	Ribonuclease H-like	2	2
EGF/Laminin	Notch domain	2	2
SMAD/FHA domain	"Winged helix" DNA-binding domain	2	2
Immunoglobulin	TSP-1 type 1 repeat	2	2
Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)	2	2
AN1-like Zinc finger	AN1-like Zinc finger	2	1
Retrovirus zinc finger-like domains	P-loop containing nucleoside triphosphate hydrolases	2	1
FYVE/PHD zinc finger	SMAD/FHA domain	2	2
Bet v1-like	Cysteine proteinases	2	2
DNA repair protein MutS, domain II	DNA repair protein MutS, domain III	2	1
SH3-domain	EF-hand	2	2
Second domain of FERM	A middle domain of Talin 1	2	2
Ubiquitin-like	ARM repeat	2	2
Cysteine proteinases	DUSP-like	2	2
F1F0 ATP synthase subunit C	F1F0 ATP synthase subunit C	2	2
"Winged helix" DNA-binding domain	PH domain-like	2	2
RNA-binding domain, RBD	Retrovirus zinc finger-like domains	2	2
Cysteine-rich domain	SH2 domain	2	2
Concanavalin A-like lectins/glucanases	WD40 repeat-like	2	2
"Winged helix" DNA-binding domain	Sec63 N-terminal domain-like	2	2
Pre-PUA domain	PUA domain-like	2	1
Translational machinery components	L30e-like	2	2
POZ domain	WD40 repeat-like	2	2
EF-hand	WD40 repeat-like	2	2
"Winged helix" DNA-binding domain	Protein kinase-like (PK-like)	2	2
P-loop containing nucleoside triphosphate hydrolases	Bromodomain	2	2
FAD/NAD(P)-binding domain	FAD/NAD-linked reductases, dimerisation (C-terminal) domain	2	2
I/LWEQ domain	I/LWEQ domain	2	2
Putative DNA-binding domain	SAND domain-like	2	2
PH domain-like	EF-hand	2	2
ARM repeat	BEACH domain	2	2
Eukaryotic type KH-domain (KH-domain type I)	Tudor/PWWP/MBT	2	1
Glycoside hydrolase/deacetylase	Families 57/38 glycoside transferase middle domain	2	2
Translation initiation factor 2 beta, aIF2beta, N-terminal domain	Zinc-binding domain of translation initiation factor 2 beta	2	2
Metalloproteases ("zincins"), catalytic domain	ARM repeat	2	1
Calpain large subunit, middle domain (domain III)	Calpain large subunit, middle domain (domain III)	2	2
Class II aaRS and biotin synthetases	Translation proteins	2	1
R1 subunit of ribonucleotide reductase, N-terminal domain	PFL-like glycyl radical enzymes	2	1
WGR domain-like	Domain of poly(ADP-ribose) polymerase	2	2
L domain-like	Fibronectin type III	2	2
Ras GEF	Ras GEF	2	2
Ubiquitin-like	C2 domain (Calcium/lipid-binding domain, CaLB)	2	2
Bet v1-like	Calpain large subunit, middle domain (domain III)	2	2
Glycoside hydrolase/deacetylase	Galactose mutarotase-like	2	2
P-loop containing nucleoside triphosphate hydrolases	Initiation factor IF2/eIF5b, domain 3	2	2
FAD/NAD(P)-binding domain	FAD/NAD(P)-binding domain	2	2
Notch domain	Ankyrin repeat	2	2
Succinyl-CoA synthetase domains	NAD(P)-binding Rossmann-fold domains	2	2
C2 domain (Calcium/lipid-binding domain, CaLB)	Hect, E3 ligase catalytic domain	2	2
C2 domain (Calcium/lipid-binding domain, CaLB)	WW domain	2	2
ARM repeat	Subdomain of clathrin and coatomer appendage domain	2	2
RING/U-box	RNA-binding domain, RBD	2	2
DNA/RNA polymerases	DNA/RNA polymerases	2	2
ARM repeat	Ankyrin repeat	2	2
Ubiquitin-like	P-loop containing nucleoside triphosphate hydrolases	2	2
Ubiquitin-like	UBA-like	2	2
Cryptochrome/photolyase, N-terminal domain	Cryptochrome/photolyase FAD-binding domain	2	2
Ankyrin repeat	HIT/MYND zinc finger-like	2	2
CRAL/TRIO domain	(Phosphotyrosine protein) phosphatases II	2	2
CRAL/TRIO N-terminal domain	(Phosphotyrosine protein) phosphatases II	2	2
Arginase/deacetylase	Arginase/deacetylase	2	2
Second domain of FERM	Concanavalin A-like lectins/glucanases	2	2
Galactose mutarotase-like	(Trans)glycosidases	2	2
UBA-like	Cysteine proteinases	2	2
ATP-dependent DNA ligase DNA-binding domain	BRCT domain	2	2
CRAL/TRIO N-terminal domain	Supernatant protein factor (SPF), C-terminal domain	2	1
Dimerization-anchoring domain of cAMP-dependent PK regulatory subunit	cAMP-binding domain-like	2	2
TPR-like	RING/U-box	2	2
alpha-helical ferredoxin	FMN-linked oxidoreductases	2	2
Second domain of FERM	Moesin tail domain	2	2
Cation efflux protein cytoplasmic domain-like	P-loop containing nucleoside triphosphate hydrolases	1	1
Lipovitellin-phosvitin complex; beta-sheet shell regions	Lipovitellin-phosvitin complex, superhelical domain	1	1
WW domain	FKBP-like	1	1
Nucleic acid-binding proteins	BRCA2 tower domain	1	1
PX domain	Phospholipase D/nuclease	1	1
S15/NS1 RNA-binding domain	Class II aaRS ABD-related	1	1
Metal cation-transporting ATPase, ATP-binding domain N	Metal cation-transporting ATPase, ATP-binding domain N	1	1
Radical SAM enzymes	Acyl-CoA N-acyltransferases (Nat)	1	1
Polo-box domain	Kelch motif	1	1
PUG domain-like	Cysteine proteinases	1	1
FYVE/PHD zinc finger	PDZ domain-like	1	1
Neurotransmitter-gated ion-channel transmembrane pore	RmlC-like cupins	1	1
Acyl-CoA binding protein	Supernatant protein factor (SPF), C-terminal domain	1	1
MIR domain	IP3 receptor type 1 binding core, domain 2	1	1
ENTH/VHS domain	Clathrin adaptor appendage domain	1	1
PX domain	Protein kinase-like (PK-like)	1	1
Elongation factor TFIIS domain 2	Zinc beta-ribbon	1	1
SH2 domain	WD40 repeat-like	1	1
Bromodomain	HLH, helix-loop-helix DNA-binding domain	1	1
EGF/Laminin	TIMP-like	1	1
RUN domain-like	PH domain-like	1	1
SH3-domain	SAM/Pointed domain	1	1
Cation efflux protein cytoplasmic domain-like	HAND domain of the nucleosome remodeling ATPase ISWI	1	1
P-loop containing nucleoside triphosphate hydrolases	Growth factor receptor domain	1	1
PEP carboxykinase N-terminal domain	PEP carboxykinase-like	1	1
Tetraspanin	EF-hand	1	1
TATA-box binding protein-like	C-terminal domain of alpha and beta subunits of F1 ATP synthase	1	1
"Winged helix" DNA-binding domain	Regulator of G-protein signaling, RGS	1	1
Arginase/deacetylase	RING/U-box	1	1
Cullin homology domain	Moesin tail domain	1	1
Retrovirus zinc finger-like domains	RING/U-box	1	1
Translational machinery components	Head domain of nucleotide exchange factor GrpE	1	1
Adenine nucleotide alpha hydrolases-like	Putative DNA-binding domain	1	1
Nucleotidylyl transferase	Class II aaRS and biotin synthetases	1	1
UBA-like	DNase I-like	1	1
Nucleotide cyclase	A DNA-binding domain in eukaryotic transcription factors	1	1
Immunoglobulin	alpha/beta-Hydrolases	1	1
Tudor/PWWP/MBT	HIT/MYND zinc finger-like	1	1
dsRNA-binding domain-like	P-loop containing nucleoside triphosphate hydrolases	1	1
P-loop containing nucleoside triphosphate hydrolases	eIF4e-like	1	1
Tudor/PWWP/MBT	Ubiquitin-like	1	1
TPR-like	Clavaminate synthase-like	1	1
GST C-terminal domain-like	Class II aaRS ABD-related	1	1
Ubiquitin-like	Cap-Gly domain	1	1
alpha/beta-Hydrolases	alpha/beta-Hydrolases	1	1
ENTH/VHS domain	Periplasmic binding protein-like I	1	1
P-loop containing nucleoside triphosphate hydrolases	Signal peptide-binding domain	1	1
B-box zinc-binding domain	TRAF domain-like	1	1
Actin depolymerizing proteins	VHP, Villin headpiece domain	1	1
Cadherin-like	Concanavalin A-like lectins/glucanases	1	1
SAND domain-like	Ran binding protein zinc finger-like	1	1
Annexin	Annexin	1	1
UBA-like	KA1-like	1	1
C2 domain (Calcium/lipid-binding domain, CaLB)	vWA-like	1	1
Conserved domain common to transcription factors TFIIS, elongin A, CRSP70	Elongation factor TFIIS domain 2	1	1
Notch domain	Notch domain	1	1
BRCT domain	Lesion bypass DNA polymerase (Y-family), little finger domain	1	1
vWA-like	WD40 repeat-like	1	1
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase	Type II DNA topoisomerase	1	1
N-terminal nucleophile aminohydrolases (Ntn hydrolases)	Nucleotide-binding domain	1	1
Cysteine proteinases	Proton glutamate symport protein	1	1
DUSP-like	DUSP-like	1	1
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase	DNA mismatch repair protein MutL	1	1
P-loop containing nucleoside triphosphate hydrolases	Hypothetical protein YjiA, C-terminal domain	1	1
TATA-box binding protein-like	Zn-binding ribosomal proteins	1	1
CalX-like	C-type lectin-like	1	1
L domain-like	NTF2-like	1	1
Fibronectin type III	Multiheme cytochromes	1	1
Methionyl-tRNA synthetase (MetRS), Zn-domain	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	1	1
PX domain	RNI-like	1	1
Voltage-gated potassium channels	EF-hand	1	1
Polo-box domain	WD40 repeat-like	1	1
RNA-binding domain, RBD	PF0523-like	1	1
FMN-linked oxidoreductases	4Fe-4S ferredoxins	1	1
P-loop containing nucleoside triphosphate hydrolases	Homeodomain-like	1	1
DNA clamp	DNA clamp	1	1
HR1 repeat	Protein kinase-like (PK-like)	1	1
Metallo-hydrolase/oxidoreductase	beta-beta-alpha zinc fingers	1	1
WD40 repeat-like	Glycolipid transfer protein, GLTP	1	1
Concanavalin A-like lectins/glucanases	ARM repeat	1	1
Cysteine proteinases	alpha/beta-Hydrolases	1	1
MIR domain	EF-hand	1	1
EF-hand	TSP-1 type 1 repeat	1	1
Alpha subunit of glutamate synthase, C-terminal domain	alpha-helical ferredoxin	1	1
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain	Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain	1	1
SMAD/FHA domain	Conserved domain common to transcription factors TFIIS, elongin A, CRSP70	1	1
Galactose-binding domain-like	EGF/Laminin	1	1
Class I glutamine amidotransferase-like	Adenine nucleotide alpha hydrolases-like	1	1
Metallo-dependent phosphatases	UDP-Glycosyltransferase/glycogen phosphorylase	1	1
Polo-box domain	YVTN repeat-like/Quinoprotein amine dehydrogenase	1	1
GMP synthetase C-terminal dimerisation domain	GMP synthetase C-terminal dimerisation domain	1	1
Actin-crosslinking proteins	Actin-crosslinking proteins	1	1
L domain-like	RING/U-box	1	1
DNA-binding domain	FYVE/PHD zinc finger	1	1
TATA-box binding protein-like	DNA-glycosylase	1	1
Fibronectin type III	SH3-domain	1	1
Lissencephaly-1 protein (Lis-1, PAF-AH alpha) N-terminal domain	WD40 repeat-like	1	1
Glucocorticoid receptor-like (DNA-binding domain)	Ribokinase-like	1	1
Somatomedin B domain	TSP-1 type 1 repeat	1	1
Rof/RNase P subunit-like	Cysteine proteinases	1	1
Glucocorticoid receptor-like (DNA-binding domain)	NAD(P)-binding Rossmann-fold domains	1	1
Glucocorticoid receptor-like (DNA-binding domain)	Putative DNA-binding domain	1	1
Ankyrin repeat	SH3-domain	1	1
UBC-like	Protein kinase-like (PK-like)	1	1
FYVE/PHD zinc finger	"Winged helix" DNA-binding domain	1	1
Thioredoxin-like	Cysteine proteinases	1	1
Metallo-hydrolase/oxidoreductase	UBC-like	1	1
C2 domain (Calcium/lipid-binding domain, CaLB)	C-terminal domain of PLC-beta	1	1
CCCH zinc finger	CHY zinc finger-like	1	1
Staphylococcal nuclease	Staphylococcal nuclease	1	1
SET domain	Homeodomain-like	1	1
EF-hand	POZ domain	1	1
"Winged helix" DNA-binding domain	PRC-barrel domain	1	1
Translation proteins	Translation proteins	1	1
Coiled-coil domain of nucleotide exchange factor GrpE	Head domain of nucleotide exchange factor GrpE	1	1
Rudiment single hybrid motif	Single hybrid motif	1	1
beta-Galactosidase/glucuronidase domain	(Trans)glycosidases	1	1
PH domain-like	HMG-box	1	1
ADP-ribosylation	Periplasmic binding protein-like I	1	1
Polo-box domain	POZ domain	1	1
Family A G protein-coupled receptor-like	Nucleotide-diphospho-sugar transferases	1	1
(Phosphotyrosine protein) phosphatases II	Chaperone J-domain	1	1
P-loop containing nucleoside triphosphate hydrolases	RNI-like	1	1
p53-like transcription factors	DNA-binding protein LAG-1 (CSL)	1	1
Ankyrin repeat	Eukaryotic type KH-domain (KH-domain type I)	1	1
Ubiquitin-like	Ran binding protein zinc finger-like	1	1
RING/U-box	Chaperone J-domain	1	1
Ribonuclease H-like	Phosphoglucomutase, first 3 domains	1	1
Activator of Hsp90 ATPase, Aha1	Bet v1-like	1	1
FF domain	SMAD/FHA domain	1	1
Acyl-CoA N-acyltransferases (Nat)	Acyl-CoA N-acyltransferases (Nat)	1	1
Calponin-homology domain, CH-domain	RING/U-box	1	1
WW domain	SMAD/FHA domain	1	1
Succinyl-CoA synthetase domains	Citrate synthase	1	1
L27 domain	L27 domain	1	1
Leucine zipper domain	Leucine zipper domain	1	1
Prokaryotic ribosomal protein L17	Nucleotidylyl transferase	1	1
HAD-like	Acyl-CoA binding protein	1	1
Periplasmic binding protein-like II	Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain	1	1
HAD-like	Ankyrin repeat	1	1
P-loop containing nucleoside triphosphate hydrolases	Cysteine proteinases	1	1
L domain-like	PDZ domain-like	1	1
E set domains	Glycosyl hydrolase domain	1	1
Acyl-CoA N-acyltransferases (Nat)	ARM repeat	1	1
DNA-binding protein LAG-1 (CSL)	E set domains	1	1
GckA/TtuD-like	GckA/TtuD-like	1	1
Zinc-binding domain of translation initiation factor 2 beta	ARM repeat	1	1
FMN-linked oxidoreductases	dsRNA-binding domain-like	1	1
TPR-like	RNA-binding domain, RBD	1	1
alpha/beta-Hydrolases	EF-hand	1	1
Fibronectin type III	Concanavalin A-like lectins/glucanases	1	1
Cullin homology domain	ARM repeat	1	1
Hypothetical protein PA1324	Carboxypeptidase regulatory domain-like	1	1
FKBP-like	FKBP-like	1	1
SH2 domain	Isochorismatase-like hydrolases	1	1
PUA domain-like	Ribosomal protein S5 domain 2-like	1	1
GST C-terminal domain-like	Nucleotidylyl transferase	1	1
Nucleotide-diphospho-sugar transferases	Seven-hairpin glycosidases	1	1
t-snare proteins	SNARE fusion complex	1	1
FAD-binding/transporter-associated domain-like	FAD-linked oxidases, C-terminal domain	1	1
Galactose-binding domain-like	Protein kinase-like (PK-like)	1	1
PRTase-like	Ribulose-phoshate binding barrel	1	1
PLP-dependent transferases	ARM repeat	1	1
Ribosomal protein L25-like	Class II aaRS ABD-related	1	1
SMAD/FHA domain	Zinc beta-ribbon	1	1
Quinoprotein alcohol dehydrogenase-like	WD40 repeat-like	1	1
BRCT domain	post-AAA+ oligomerization domain-like	1	1
Domain of poly(ADP-ribose) polymerase	Voltage-gated potassium channels	1	1
Bet v1-like	MIT domain	1	1
RING/U-box	Immunoglobulin	1	1
Ribonuclease H-like	Phosphoglucomutase, C-terminal domain	1	1
FYVE/PHD zinc finger	GroEL apical domain-like	1	1
Ubiquitin-like	Moesin tail domain	1	1
HIT-like	HIT-like	1	1
vWA-like	Growth factor receptor domain	1	1
CCCH zinc finger	CSL zinc finger	1	1
vWA-like	TSP-1 type 1 repeat	1	1
PUG domain-like	FYVE/PHD zinc finger	1	1
RuvA domain 2-like	SH2 domain	1	1
P-loop containing nucleoside triphosphate hydrolases	beta-beta-alpha zinc fingers	1	1
TPR-like	PIN domain-like	1	1
WD40 repeat-like	Peptidase/esterase 'gauge' domain	1	1
BAR/IMD domain-like	SH2 domain	1	1
L9 N-domain-like	Ribonuclease H-like	1	1
SAM/Pointed domain	"Winged helix" DNA-binding domain	1	1
Glucocorticoid receptor-like (DNA-binding domain)	SH3-domain	1	1
Growth factor receptor domain	(Phosphotyrosine protein) phosphatases II	1	1
Thiamin diphosphate-binding fold (THDP-binding)	TK C-terminal domain-like	1	1
N-terminal domain of cbl (N-cbl)	EF-hand	1	1
ARM repeat	SH2 domain	1	1
Spectrin repeat	DBL homology domain (DH-domain)	1	1
P-loop containing nucleoside triphosphate hydrolases	HRDC-like	1	1
Kringle-like	Kringle-like	1	1
PGBD-like	Hemopexin-like domain	1	1
FYVE/PHD zinc finger	Concanavalin A-like lectins/glucanases	1	1
Rad51 N-terminal domain-like	P-loop containing nucleoside triphosphate hydrolases	1	1
RNA-binding domain, RBD	PH domain-like	1	1
Plexin repeat	E set domains	1	1
RING/U-box	Protein kinase-like (PK-like)	1	1
EGF/Laminin	ARM repeat	1	1
FLJ32549 domain-like	FLJ32549 C-terminal domain-like	1	1
(Phosphotyrosine protein) phosphatases II	DNA ligase/mRNA capping enzyme, catalytic domain	1	1
MAST3 pre-PK domain-like	Protein kinase-like (PK-like)	1	1
HAND domain of the nucleosome remodeling ATPase ISWI	Homeodomain-like	1	1
SAM/Pointed domain	ADP-ribosylation	1	1
DNA breaking-rejoining enzymes	Eukaryotic DNA topoisomerase I, dispensable insert domain	1	1
POZ domain	Alpha-L RNA-binding motif	1	1
(Trans)glycosidases	Six-hairpin glycosidases	1	1
WW domain	EF-hand	1	1
Cation efflux protein cytoplasmic domain-like	Homeodomain-like	1	1
TRAF domain-like	TRAF domain-like	1	1
Plexin repeat	vWA-like	1	1
Mitochondrial carrier	Glutathione synthetase ATP-binding domain-like	1	1
ArfGap/RecO-like zinc finger	Nucleotide-diphospho-sugar transferases	1	1
PDZ domain-like	(Phosphotyrosine protein) phosphatases II	1	1
Trypsin-like serine proteases	Trypsin-like serine proteases	1	1
Staphylococcal nuclease	Tudor/PWWP/MBT	1	1
Chaperone J-domain	E set domains	1	1
ADP-ribosylation	Periplasmic binding protein-like II	1	1
Macro domain-like	Zn-dependent exopeptidases	1	1
RNA-binding domain, RBD	DPP6 N-terminal domain-like	1	1
Putative DNA-binding domain	Putative DNA-binding domain	1	1
Regulator of G-protein signaling, RGS	Nucleic acid-binding proteins	1	1
RNA-binding domain, RBD	DBL homology domain (DH-domain)	1	1
RING/U-box	Rnp2-like	1	1
Cullin homology domain	Protein kinase-like (PK-like)	1	1
ADP-ribosylation	ADP-ribosylation	1	1
Formate/glycerate dehydrogenase catalytic domain-like	DHS-like NAD/FAD-binding domain	1	1
RNA-binding domain, RBD	PX domain	1	1
Rhodanese/Cell cycle control phosphatase	Cysteine proteinases	1	1
EF-hand	DBL homology domain (DH-domain)	1	1
P-loop containing nucleoside triphosphate hydrolases	Prokaryotic type KH domain (KH-domain type II)	1	1
P-loop containing nucleoside triphosphate hydrolases	Multidrug efflux transporter AcrB transmembrane domain	1	1
Rof/RNase P subunit-like	Calpain large subunit, middle domain (domain III)	1	1
RUN domain-like	Lipase/lipooxygenase domain (PLAT/LH2 domain)	1	1
TPR-like	Metallo-dependent phosphatases	1	1
BRCT domain	Homeodomain-like	1	1
Saposin	Saposin	1	1
GST C-terminal domain-like	C-terminal domain of ProRS	1	1
N-terminal domain of adenylylcyclase associated protein, CAP	C-terminal domain of adenylylcyclase associated protein	1	1
Nucleotide-binding domain	4Fe-4S ferredoxins	1	1
Plakin repeat	EF-hand	1	1
Ubiquitin-like	Ankyrin repeat	1	1
Zn-dependent exopeptidases	ARM repeat	1	1
PLC-like phosphodiesterases	C-terminal domain of PLC-beta	1	1
TGS-like	ThrRS/AlaRS common domain	1	1
Protein kinase-like (PK-like)	EF-hand	1	1
Eukaryotic type KH-domain (KH-domain type I)	LigT-like	1	1
GST C-terminal domain-like	Ribosomal protein L25-like	1	1
Calponin-homology domain, CH-domain	P-loop containing nucleoside triphosphate hydrolases	1	1
EF-hand	Rhomboid-like	1	1
Protein kinase-like (PK-like)	Ypt/Rab-GAP domain of gyp1p	1	1
Ubiquitin-like	HAD-like	1	1
Ankyrin repeat	ADP-ribosylation	1	1
SH2 domain	RING/U-box	1	1
Oligoxyloglucan reducing end-specific cellobiohydrolase	Oligoxyloglucan reducing end-specific cellobiohydrolase	1	1
vWA-like	C-terminal domain of Ku80	1	1
Calponin-homology domain, CH-domain	DBL homology domain (DH-domain)	1	1
RING/U-box	Fibronectin type III	1	1
ARM repeat	FYVE/PHD zinc finger	1	1
Ubiquitin-like	FYVE/PHD zinc finger	1	1
GAT-like domain	Clathrin adaptor appendage domain	1	1
SNARE-like	P-loop containing nucleoside triphosphate hydrolases	1	1
Nucleic acid-binding proteins	eIF-2-alpha, C-terminal domain	1	1
Protein kinase-like (PK-like)	Kelch motif	1	1
alpha-ketoacid dehydrogenase kinase, N-terminal domain	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase	1	1
Nucleic acid-binding proteins	"Winged helix" DNA-binding domain	1	1
Acetyl-CoA synthetase-like	Acetyl-CoA synthetase-like	1	1
HMA, heavy metal-associated domain	HMA, heavy metal-associated domain	1	1
vWA-like	GFP-like	1	1
EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain	EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain	1	1
Acyl-CoA binding protein	Ankyrin repeat	1	1
PDZ domain-like	GTPase activation domain, GAP	1	1
RING/U-box	WWE domain	1	1
Ubiquitin-like	NAD kinase/diacylglycerol kinase-like	1	1
RNA-binding domain, RBD	S-adenosyl-L-methionine-dependent methyltransferases	1	1
vWA-like	BRCA2 tower domain	1	1
Ribosomal protein S5 domain 2-like	TSP-1 type 1 repeat	1	1
E set domains	(Trans)glycosidases	1	1
BRCA2 helical domain	BRCA2 tower domain	1	1
Class I glutamine amidotransferase-like	GMP synthetase C-terminal dimerisation domain	1	1
Radical SAM enzymes	LDL receptor-like module	1	1
WW domain	BAG domain	1	1
PheT/TilS domain	Class II aaRS and biotin synthetases	1	1
Metallo-hydrolase/oxidoreductase	Metallo-hydrolase/oxidoreductase	1	1
SET domain	WW domain	1	1
EF-hand	Glutathione synthetase ATP-binding domain-like	1	1
Ankyrin repeat	FabD/lysophospholipase-like	1	1
BAR/IMD domain-like	Nucleotide-diphospho-sugar transferases	1	1
Protein kinase-like (PK-like)	Class II aaRS and biotin synthetases	1	1
Ubiquitin-like	The spindle assembly checkpoint protein mad2	1	1
SH2 domain	Trm112p-like	1	1
SH3-domain	C2 domain (Calcium/lipid-binding domain, CaLB)	1	1
Conserved domain common to transcription factors TFIIS, elongin A, CRSP70	Zinc beta-ribbon	1	1
BRCT domain	DBL homology domain (DH-domain)	1	1
Glucocorticoid receptor-like (DNA-binding domain)	VPS9 domain	1	1
Cullin repeat-like	Protein kinase-like (PK-like)	1	1
RNase III domain-like	dsRNA-binding domain-like	1	1
SNARE fusion complex	RING/U-box	1	1
DBL homology domain (DH-domain)	Fibronectin type III	1	1
NAD(P)-binding Rossmann-fold domains	Clavaminate synthase-like	1	1
Protein kinase-like (PK-like)	POZ domain	1	1
UBC-like	Class II aaRS and biotin synthetases	1	1
FAD-linked reductases, C-terminal domain	EF-hand	1	1
P-loop containing nucleoside triphosphate hydrolases	SMAD/FHA domain	1	1
Cullin repeat-like	ARM repeat	1	1
SAP domain	P-loop containing nucleoside triphosphate hydrolases	1	1
Tex N-terminal region-like	SH2 domain	1	1
Terpenoid synthases	Restriction endonuclease-like	1	1
FabD/lysophospholipase-like	Probable ACP-binding domain of malonyl-CoA ACP transacylase	1	1
Metalloproteases ("zincins"), catalytic domain	Spermadhesin, CUB domain	1	1
Protein kinase-like (PK-like)	Chaperone J-domain	1	1
Lipovitellin-phosvitin complex; beta-sheet shell regions	Lipovitellin-phosvitin complex; beta-sheet shell regions	1	1
PH domain-like	Putative isomerase YbhE	1	1
Molybdenum cofactor biosynthesis proteins	Adenine nucleotide alpha hydrolases-like	1	1
WD40 repeat-like	3-carboxy-cis,cis-mucoante lactonizing enzyme	1	1
EGF/Laminin	YWTD domain	1	1
Ribosomal protein L25-like	C-terminal domain of ProRS	1	1
Ribosomal protein S5 domain 2-like	Nop domain	1	1
Prokaryotic type KH domain (KH-domain type II)	Ribosomal protein S3 C-terminal domain	1	1
PLP-dependent transferases	Adenine nucleotide alpha hydrolases-like	1	1
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	1	1
Regulator of G-protein signaling, RGS	Cysteine-rich domain	1	1
Band 7/SPFH domain	Ribonuclease H-like	1	1
EGF/Laminin	Methyl-accepting chemotaxis protein (MCP) signaling domain	1	1
PH domain-like	Trm112p-like	1	1
(Phosphotyrosine protein) phosphatases II	C2 domain (Calcium/lipid-binding domain, CaLB)	1	1
P-loop containing nucleoside triphosphate hydrolases	Metallo-dependent phosphatases	1	1
EF-hand	C-terminal domain of PLC-beta	1	1
Surp module (SWAP domain)	ENTH/VHS domain	1	1
WGR domain-like	ENTH/VHS domain	1	1
Ankyrin repeat	SOCS box-like	1	1
Ribonuclease PH domain 2-like	EF-hand	1	1
SH2 domain	Ankyrin repeat	1	1
Amine oxidase N-terminal region	Amine oxidase catalytic domain	1	1
TAZ domain	FYVE/PHD zinc finger	1	1
Band 7/SPFH domain	PAZ domain	1	1
Ribosomal protein S5 domain 2-like	alpha/beta-Hydrolases	1	1
WD40 repeat-like	Kelch motif	1	1
Cytochrome b5-like heme/steroid binding domain	Riboflavin synthase domain-like	1	1
Metalloproteases ("zincins"), catalytic domain	Metalloproteases ("zincins"), catalytic domain	1	1
FYVE/PHD zinc finger	SAM/Pointed domain	1	1
EF-hand	Nop domain	1	1
Protein kinase-like (PK-like)	YVTN repeat-like/Quinoprotein amine dehydrogenase	1	1
Carbon-nitrogen hydrolase	HIT-like	1	1
Nucleotide-binding domain	Nucleotide-binding domain	1	1
L27 domain	P-loop containing nucleoside triphosphate hydrolases	1	1
RNI-like	UBC-like	1	1
ISP transmembrane anchor	ISP domain	1	1
Ankyrin repeat	Nucleotide-diphospho-sugar transferases	1	1
NTF2-like	UBA-like	1	1
Supernatant protein factor (SPF), C-terminal domain	Immunoglobulin	1	1
Glutathione synthetase ATP-binding domain-like	Single hybrid motif	1	1
beta-beta-alpha zinc fingers	Growth factor receptor domain	1	1
GTPase activation domain, GAP	GTPase activation domain, GAP	1	1
P-loop containing nucleoside triphosphate hydrolases	EGF/Laminin	1	1
TATA-box binding protein-like	P-loop containing nucleoside triphosphate hydrolases	1	1
GTPase activation domain, GAP	Bet v1-like	1	1
SAM/Pointed domain	PDZ domain-like	1	1
GAF domain-like	HD-domain/PDEase-like	1	1
EF-hand	Kelch motif	1	1
Hedgehog/DD-peptidase	Hedgehog/intein (Hint) domain	1	1
YWTD domain	LDL receptor-like module	1	1
RING/U-box	MFS general substrate transporter	1	1
t-snare proteins	Nucleotidylyl transferase	1	1
RNA-binding domain, RBD	Regulator of G-protein signaling, RGS	1	1
PH domain-like	Nucleotide-diphospho-sugar transferases	1	1
Domain of poly(ADP-ribose) polymerase	ENTH/VHS domain	1	1
Nucleic acid-binding proteins	TPR-like	1	1
Eukaryotic RPB5 N-terminal domain	RPB5-like RNA polymerase subunit	1	1
Nucleotidylyl transferase	C-terminal domain of ProRS	1	1
Band 7/SPFH domain	SCP-like	1	1
Protein kinase-like (PK-like)	(Phosphotyrosine protein) phosphatases II	1	1
TGS-like	Class II aaRS and biotin synthetases	1	1
YWTD domain	YWTD domain	1	1
Kazal-type serine protease inhibitors	Kazal-type serine protease inhibitors	1	1
Cytochrome b5-like heme/steroid binding domain	Ferredoxin reductase-like, C-terminal NADP-linked domain	1	1
L domain-like	DNase I-like	1	1
Nicotinic receptor ligand binding domain-like	RmlC-like cupins	1	1
Domain of poly(ADP-ribose) polymerase	Periplasmic binding protein-like I	1	1
MIT domain	Calpain large subunit, middle domain (domain III)	1	1
UBA-like	UBA-like	1	1
Conserved domain common to transcription factors TFIIS, elongin A, CRSP70	CCCH zinc finger	1	1
NAD(P)-binding Rossmann-fold domains	NAD(P)-binding Rossmann-fold domains	1	1
Acetyl-CoA synthetase-like	Quinoprotein alcohol dehydrogenase-like	1	1
ADP-ribosylation	Voltage-gated potassium channels	1	1
PDZ domain-like	WW domain	1	1
"Winged helix" DNA-binding domain	Second domain of FERM	1	1
Cysteine-rich domain	PH domain-like	1	1
SAM/Pointed domain	PH domain-like	1	1
UDP-Glycosyltransferase/glycogen phosphorylase	UDP-Glycosyltransferase/glycogen phosphorylase	1	1
Alpha subunit of glutamate synthase, C-terminal domain	Nucleotide-binding domain	1	1
Chaperone J-domain	ARM repeat	1	1
DNA-binding domain	SET domain	1	1
"Winged helix" DNA-binding domain	RNA-binding domain, RBD	1	1
Glucocorticoid receptor-like (DNA-binding domain)	Domain of poly(ADP-ribose) polymerase	1	1
UBA-like	XPC-binding domain	1	1
Calponin-homology domain, CH-domain	SH3-domain	1	1
cAMP-binding domain-like	Ras GEF	1	1
NAD(P)-binding Rossmann-fold domains	Citrate synthase	1	1
Plexin repeat	GTPase activation domain, GAP	1	1
Spectrin repeat	SH3-domain	1	1
Cadherin-like	EGF/Laminin	1	1
Peptidase/esterase 'gauge' domain	alpha/beta-Hydrolases	1	1
Complement control module/SCR domain	Complement control module/SCR domain	1	1
(Phosphotyrosine protein) phosphatases II	Cyclin-like	1	1
ClpP/crotonase	Kelch motif	1	1
Eukaryotic type KH-domain (KH-domain type I)	Retrovirus zinc finger-like domains	1	1
Protein kinase-like (PK-like)	Cysteine proteinases	1	1
F-box domain	Sec7 domain	1	1
Hedgehog/DD-peptidase	Hedgehog/DD-peptidase	1	1
Sm-like ribonucleoproteins	Ferredoxin reductase-like, C-terminal NADP-linked domain	1	1
PH domain-like	Ypt/Rab-GAP domain of gyp1p	1	1
Eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment	Eukaryotic DNA topoisomerase I, dispensable insert domain	1	1
ENTH/VHS domain	FYVE/PHD zinc finger	1	1
TNF receptor-like	TNF receptor-like	1	1
Dom34/Pelota N-terminal domain-like	Translational machinery components	1	1
ENTH/VHS domain	Periplasmic binding protein-like II	1	1
Terpenoid synthases	RuvA domain 2-like	1	1
Adenine nucleotide alpha hydrolases-like	Cation efflux protein transmembrane domain-like	1	1
Cullin homology domain	Second domain of FERM	1	1
RUN domain-like	Tropomyosin	1	1
Polo-box domain	EF-hand	1	1
Tropomyosin	FYVE/PHD zinc finger	1	1
Phosphofructokinase	Phosphofructokinase	1	1
Putative isomerase YbhE	WD40 repeat-like	1	1
PapD-like	PapD-like	1	1
"Winged helix" DNA-binding domain	HRDC-like	1	1
beta-beta-alpha zinc fingers	S-adenosyl-L-methionine-dependent methyltransferases	1	1
YVTN repeat-like/Quinoprotein amine dehydrogenase	Kelch motif	1	1
WW domain	PH domain-like	1	1
"Winged helix" DNA-binding domain	Transducin (heterotrimeric G protein), gamma chain	1	1
BPTI-like	Immunoglobulin	1	1
Frizzled cysteine-rich domain	TIMP-like	1	1
DBL homology domain (DH-domain)	Ras GEF	1	1
Fibronectin type III	Ankyrin repeat	1	1
Plexin repeat	TSP-1 type 1 repeat	1	1
Protease propeptides/inhibitors	Zn-dependent exopeptidases	1	1
P-loop containing nucleoside triphosphate hydrolases	Fzo-like conserved region	1	1
C2 domain (Calcium/lipid-binding domain, CaLB)	dsRNA-binding domain-like	1	1
"Winged helix" DNA-binding domain	UDP-Glycosyltransferase/glycogen phosphorylase	1	1
PH domain-like	Wiscott-Aldrich syndrome protein, WASP, C-terminal domain	1	1
PDZ domain-like	C2 domain (Calcium/lipid-binding domain, CaLB)	1	1
Zn-dependent exopeptidases	Bacterial exopeptidase dimerisation domain	1	1
Suppressor of Fused, N-terminal domain	Suppressor of Fused, N-terminal domain	1	1
(Phosphotyrosine protein) phosphatases II	FYVE/PHD zinc finger	1	1
P-loop containing nucleoside triphosphate hydrolases	Second domain of FERM	1	1
2Fe-2S ferredoxin-like	4Fe-4S ferredoxins	1	1
GTPase activation domain, GAP	SH3-domain	1	1
S-adenosyl-L-methionine-dependent methyltransferases	Putative methyltransferase TM0872, insert domain	1	1
beta-beta-alpha zinc fingers	EGF/Laminin	1	1
MAST3 pre-PK domain-like	PDZ domain-like	1	1
HMA, heavy metal-associated domain	Metal cation-transporting ATPase, ATP-binding domain N	1	1
HAD-like	MIT domain	1	1
alpha/beta-Hydrolases	Nop domain	1	1
Nucleoside diphosphate kinase, NDK	Nucleoside diphosphate kinase, NDK	1	1
NAD(P)-binding Rossmann-fold domains	Immunoglobulin	1	1
MIT domain	P-loop containing nucleoside triphosphate hydrolases	1	1
NAD-binding domain of HMG-CoA reductase	Substrate-binding domain of HMG-CoA reductase	1	1
BEACH domain	FYVE/PHD zinc finger	1	1
SAICAR synthase-like	UDP-Glycosyltransferase/glycogen phosphorylase	1	1
YVTN repeat-like/Quinoprotein amine dehydrogenase	POZ domain	1	1
N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1	L30e-like	1	1
Chaperone J-domain	beta-beta-alpha zinc fingers	1	1
(Trans)glycosidases	Beta-D-glucan exohydrolase, C-terminal domain	1	1
BAR/IMD domain-like	ArfGap/RecO-like zinc finger	1	1
"Winged helix" DNA-binding domain	SAICAR synthase-like	1	1
Transducin (heterotrimeric G protein), gamma chain	Regulator of G-protein signaling, RGS	1	1
beta-beta-alpha zinc fingers	cAMP-binding domain-like	1	1
PUA domain-like	Nucleotidylyl transferase	1	1
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain	Pyrimidine nucleoside phosphorylase C-terminal domain	1	1
WD40 repeat-like	UBC-like	1	1
PH domain-like	(Phosphotyrosine protein) phosphatases II	1	1
DNA/RNA polymerases	Immunoglobulin	1	1
WGR domain-like	Periplasmic binding protein-like II	1	1
NAD(P)-binding Rossmann-fold domains	LDL receptor-like module	1	1
PUG domain-like	Ubiquitin-like	1	1
SWIB/MDM2 domain	eIF1-like	1	1
B-box zinc-binding domain	Concanavalin A-like lectins/glucanases	1	1
Translation proteins	Histone-fold	1	1
SET domain	beta-beta-alpha zinc fingers	1	1
Nucleic acid-binding proteins	eIF2alpha middle domain-like	1	1
Glucocorticoid receptor-like (DNA-binding domain)	ADP-ribosylation	1	1
Glutathione synthetase ATP-binding domain-like	Citrate synthase	1	1
cAMP-binding domain-like	FabD/lysophospholipase-like	1	1
beta-lactamase/transpeptidase-like	Thioredoxin-like	1	1
RING/U-box	Phospholipase D/nuclease	1	1
Cysteine proteinases	Galactose-binding domain-like	1	1
CalX-like	CalX-like	1	1
PDZ domain-like	Cysteine-rich domain	1	1
P-loop containing nucleoside triphosphate hydrolases	Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain	1	1
DBL homology domain (DH-domain)	SH2 domain	1	1
FYVE/PHD zinc finger	Chromo domain-like	1	1
TPR-like	RNI-like	1	1
beta-beta-alpha zinc fingers	WW domain	1	1
Putative DNA-binding domain	Ran binding protein zinc finger-like	1	1
CCCH zinc finger	RING/U-box	1	1
C-terminal autoproteolytic domain of nucleoporin nup98	Creatinase/aminopeptidase	1	1
Periplasmic binding protein-like I	Protein kinase-like (PK-like)	1	1
beta-beta-alpha zinc fingers	FYVE/PHD zinc finger	1	1
EF-hand	YVTN repeat-like/Quinoprotein amine dehydrogenase	1	1
Protein kinase-like (PK-like)	Histone-fold	1	1
Multidrug resistance efflux transporter EmrE	Galactose-binding domain-like	1	1
DNA-binding domain	Bromodomain	1	1
beta-beta-alpha zinc fingers	Ankyrin repeat	1	1
Spermadhesin, CUB domain	EGF/Laminin	1	1
CAD & PB1 domains	Cysteine-rich domain	1	1
Protein kinase-like (PK-like)	L27 domain	1	1
EF-hand	SH2 domain	1	1
BEACH domain	NHL repeat	1	1
Class I glutamine amidotransferase-like	Class I glutamine amidotransferase-like	1	1
PH domain-like	PLC-like phosphodiesterases	1	1
Fibronectin type III	Cyclin-like	1	1
TB module/8-cys domain	Growth factor receptor domain	1	1
Acid proteases	Ribonuclease H-like	1	1
Sema domain	TSP-1 type 1 repeat	1	1
L9 N-domain-like	S-adenosyl-L-methionine-dependent methyltransferases	1	1
GST C-terminal domain-like	eEF-1beta-like	1	1
UBC-like	UBA-like	1	1
Putative DNA-binding domain	PheT/TilS domain	1	1
N-terminal nucleophile aminohydrolases (Ntn hydrolases)	Metallo-dependent phosphatases	1	1
TPR-like	Chaperone J-domain	1	1
Trefoil	(Trans)glycosidases	1	1
Rof/RNase P subunit-like	EF-hand	1	1
Voltage-gated potassium channels	Small-conductance potassium channel	1	1
Composite domain of metallo-dependent hydrolases	Composite domain of metallo-dependent hydrolases	1	1
Protein kinase-like (PK-like)	FYVE/PHD zinc finger	1	1
Chromo domain-like	ARM repeat	1	1
BAR/IMD domain-like	Protein kinase-like (PK-like)	1	1
Ribosomal protein L1	WD40 repeat-like	1	1
Ligand-binding domain in the NO signalling and Golgi transport	FYVE/PHD zinc finger	1	1
Ankyrin repeat	L domain-like	1	1
vWA-like	SAP domain	1	1
UBA-like	Elongation factor Ts (EF-Ts), dimerisation domain	1	1
Thioredoxin-like	eEF1-gamma domain	1	1
ClpP/crotonase	ClpP/crotonase	1	1
HMA, heavy metal-associated domain	Calcium ATPase, transmembrane domain M	1	1
L domain-like	SAM/Pointed domain	1	1
L domain-like	WD40 repeat-like	1	1
DEATH domain	Caspase-like	1	1
Outer arm dynein light chain 1	Tropomyosin	1	1
RING/U-box	PX domain	1	1
Actin-like ATPase domain	SNARE fusion complex	1	1
TPR-like	Ribosomal protein S10	1	1
Bromodomain	HMG-box	1	1
GST C-terminal domain-like	eEF1-gamma domain	1	1
Protease propeptides/inhibitors	Subtilisin-like	1	1
DBL homology domain (DH-domain)	Protein kinase-like (PK-like)	1	1
BRCT domain	P-loop containing nucleoside triphosphate hydrolases	1	1
FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP)	Protein kinase-like (PK-like)	1	1
BRK domain-like	Bromodomain	1	1
DNA repair protein MutS, domain III	DNA repair protein MutS, domain III	1	1
Tex N-terminal region-like	Nucleic acid-binding proteins	1	1
Cap-Gly domain	L domain-like	1	1
PA domain	Zn-dependent exopeptidases	1	1
Class II aaRS ABD-related	C-terminal domain of ProRS	1	1
MIT domain	Cysteine proteinases	1	1
SMAD/FHA domain	PH domain-like	1	1
Cullin homology domain	PH domain-like	1	1
Putative DNA-binding domain	Class II aaRS and biotin synthetases	1	1
RING/U-box	YWTD domain	1	1
RNA-binding domain, RBD	Tryptophan synthase beta subunit-like PLP-dependent enzymes	1	1
FMN-linked oxidoreductases	Alpha subunit of glutamate synthase, C-terminal domain	1	1
RNA-binding domain, RBD	dsRNA-binding domain-like	1	1
Sec1/munc18-like (SM) proteins	Sec1/munc18-like (SM) proteins	1	1
DEATH domain	WD40 repeat-like	1	1
2Fe-2S ferredoxin-like	alpha-helical ferredoxin	1	1
IP3 receptor type 1 binding core, domain 2	Concanavalin A-like lectins/glucanases	1	1
ARID-like	Chromo domain-like	1	1
Hypothetical protein SAV1430	Fe-S cluster assembly (FSCA) domain-like	1	1
Concanavalin A-like lectins/glucanases	Putative isomerase YbhE	1	1
RuvA domain 2-like	Nucleic acid-binding proteins	1	1
Metalloproteases ("zincins"), catalytic domain	EGF/Laminin	1	1
PYP-like sensor domain (PAS domain)	PYP-like sensor domain (PAS domain)	1	1
Retrovirus zinc finger-like domains	ISP transmembrane anchor	1	1
PAH2 domain	PAH2 domain	1	1
Flavoproteins	Riboflavin synthase domain-like	1	1
Thioredoxin-like	PUG domain-like	1	1
Calpain large subunit, middle domain (domain III)	C2 domain (Calcium/lipid-binding domain, CaLB)	1	1
TSP-1 type 1 repeat	Growth factor receptor domain	1	1
Galactose-binding domain-like	BRCT domain	1	1
TROVE domain-like	P-loop containing nucleoside triphosphate hydrolases	1	1
vWA-like	EGF/Laminin	1	1
NAD(P)-binding Rossmann-fold domains	DHS-like NAD/FAD-binding domain	1	1
FYVE/PHD zinc finger	SAICAR synthase-like	1	1
C-terminal autoproteolytic domain of nucleoporin nup98	Creatinase/prolidase N-terminal domain	1	1
PH domain-like	Vasodilator-stimulated phosphoprotein, VASP, tetramerisation domain	1	1
HMA, heavy metal-associated domain	HAD-like	1	1
Flavoproteins	Ferredoxin reductase-like, C-terminal NADP-linked domain	1	1
Single hybrid motif	Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex	1	1
Fe,Mn superoxide dismutase (SOD), N-terminal domain	Fe,Mn superoxide dismutase (SOD), C-terminal domain	1	1
Mannose 6-phosphate receptor domain	PH domain-like	1	1
Chaperone J-domain	Phosphoenolpyruvate/pyruvate domain	1	1
Protease propeptides/inhibitors	Galactose-binding domain-like	1	1
E set domains	GTPase activation domain, GAP	1	1
Elongation factor Ts (EF-Ts), dimerisation domain	Elongation factor Ts (EF-Ts), dimerisation domain	1	1
WD40 repeat-like	LanC-like	1	1
Cation efflux protein transmembrane domain-like	P-loop containing nucleoside triphosphate hydrolases	1	1
RNA-binding domain, RBD	SET domain	1	1
Glucocorticoid receptor-like (DNA-binding domain)	WGR domain-like	1	1
POZ domain	Galactose-binding domain-like	1	1
N-terminal domain of cbl (N-cbl)	SH2 domain	1	1
N-terminal nucleophile aminohydrolases (Ntn hydrolases)	SIS domain	1	1
eIF2alpha middle domain-like	eIF-2-alpha, C-terminal domain	1	1
beta-beta-alpha zinc fingers	Voltage-gated potassium channels	1	1
4Fe-4S ferredoxins	Formate dehydrogenase/DMSO reductase, domains 1-3	1	1
Tudor/PWWP/MBT	SET domain	1	1
Thioredoxin-like	FAD/NAD(P)-binding domain	1	1
Metallo-dependent phosphatases	GroEL apical domain-like	1	1
Methionyl-tRNA synthetase (MetRS), Zn-domain	Nucleotidylyl transferase	1	1
SH3-domain	RUN domain-like	1	1
ARM repeat	SH3-domain	1	1
Spectrin repeat	WW domain	1	1
BRCA2 helical domain	Nucleic acid-binding proteins	1	1
P-loop containing nucleoside triphosphate hydrolases	WW domain	1	1
Ankyrin repeat	Immunoglobulin	1	1
Metallo-dependent phosphatases	SAICAR synthase-like	1	1
Supernatant protein factor (SPF), C-terminal domain	LDL receptor-like module	1	1
Dom34/Pelota N-terminal domain-like	L30e-like	1	1
TSP-1 type 1 repeat	GFP-like	1	1
Nuclear receptor ligand-binding domain	Nuclear receptor ligand-binding domain	1	1
CCCH zinc finger	Retrovirus zinc finger-like domains	1	1
Immunoglobulin	GFP-like	1	1
"Winged helix" DNA-binding domain	occludin/ELL-like	1	1
CCCH zinc finger	Rhodanese/Cell cycle control phosphatase	1	1
L9 N-domain-like	Phosphoglucomutase, C-terminal domain	1	1
LDL receptor-like module	Mannose 6-phosphate receptor domain	1	1
Prokaryotic ribosomal protein L17	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	1	1
Trimeric LpxA-like enzymes	ARM repeat	1	1
Cysteine proteinases	C2 domain (Calcium/lipid-binding domain, CaLB)	1	1
SET domain	RuBisCo LSMT C-terminal, substrate-binding domain	1	1
Aminopeptidase/glucanase lid domain	Zn-dependent exopeptidases	1	1
Nqo1 FMN-binding domain-like	Nqo1 middle domain-like	1	1
ARM repeat	FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP)	1	1
Ubiquitin-like	Zn-binding ribosomal proteins	1	1
WW domain	RING/U-box	1	1
RING/U-box	Regulator of G-protein signaling, RGS	1	1
PUG domain-like	Galactose-binding domain-like	1	1
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex	CoA-dependent acyltransferases	1	1
Polo-box domain	Polo-box domain	1	1
Taf5 N-terminal domain-like	WD40 repeat-like	1	1
Chromo domain-like	BRK domain-like	1	1
EF-hand	Translation proteins SH3-like domain	1	1
PH domain-like	Formin homology 2 domain (FH2 domain)	1	1
Ankyrin repeat	RNI-like	1	1
DEATH domain	P-loop containing nucleoside triphosphate hydrolases	1	1
FAD-dependent thiol oxidase	Sm-like ribonucleoproteins	1	1
SMAD/FHA domain	Elongation factor TFIIS domain 2	1	1
beta-beta-alpha zinc fingers	Ribonuclease H-like	1	1
SPOC domain-like	C-terminal domain of Ku80	1	1
Plakin repeat	GAS2 domain-like	1	1
FAD/NAD(P)-binding domain	Ankyrin repeat	1	1
L domain-like	Concanavalin A-like lectins/glucanases	1	1
PH domain-like	alpha-catenin/vinculin-like	1	1
Cysteine-rich domain	NAD kinase/diacylglycerol kinase-like	1	1
PDZ domain-like	Regulator of G-protein signaling, RGS	1	1
YVTN repeat-like/Quinoprotein amine dehydrogenase	WD40 repeat-like	1	1
Rap30/74 interaction domains	"Winged helix" DNA-binding domain	1	1
BPTI-like	Tricorn protease domain 2	1	1
Ribosomal protein L6	Ribosomal protein L6	1	1
N-terminal domain of cbl (N-cbl)	RING/U-box	1	1
Immunoglobulin	DPP6 N-terminal domain-like	1	1
(Phosphotyrosine protein) phosphatases II	Nucleic acid-binding proteins	1	1
Kelch motif	Alpha-L RNA-binding motif	1	1
PUG domain-like	Protein kinase-like (PK-like)	1	1
TATA-box binding protein-like	N-terminal domain of alpha and beta subunits of F1 ATP synthase	1	1
TRAF domain-like	POZ domain	1	1
Periplasmic binding protein-like I	Periplasmic binding protein-like I	1	1
FYVE/PHD zinc finger	Acyl-CoA N-acyltransferases (Nat)	1	1
Ypt/Rab-GAP domain of gyp1p	WD40 repeat-like	1	1
FAD/NAD(P)-binding domain	Calponin-homology domain, CH-domain	1	1
IP3 receptor type 1 binding core, domain 2	EF-hand	1	1
Mannose 6-phosphate receptor domain	Oxysterol-binding protein-like	1	1
GFP-like	Growth factor receptor domain	1	1
WD40 repeat-like	Cyclophilin-like	1	1
PH domain-like	Bet v1-like	1	1
TSP type-3 repeat	TSP type-3 repeat	1	1
FAD/NAD(P)-binding domain	Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain	1	1
NSFL1 (p97 ATPase) cofactor p47, SEP domain	Ubiquitin-like	1	1
Chromo domain-like	EGF/Laminin	1	1
Putative methyltransferase TM0872, insert domain	WD40 repeat-like	1	1
DNase I-like	GTPase activation domain, GAP	1	1
Metalloproteases ("zincins"), catalytic domain	TSP-1 type 1 repeat	1	1
RUN domain-like	RUN domain-like	1	1
EGF/Laminin	TB module/8-cys domain	1	1
Protein kinase-like (PK-like)	UBA-like	1	1
Trefoil	Galactose mutarotase-like	1	1
Ribonuclease PH domain 2-like	alpha/beta-Hydrolases	1	1
Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain	Pyrimidine nucleoside phosphorylase C-terminal domain	1	1
UDP-glucose/GDP-mannose dehydrogenase C-terminal domain	UDP-glucose/GDP-mannose dehydrogenase C-terminal domain	1	1
ENTH/VHS domain	Voltage-gated potassium channels	1	1
BSD domain-like	BSD domain-like	1	1
lambda repressor-like DNA-binding domains	lambda repressor-like DNA-binding domains	1	1
CAD & PB1 domains	Protein kinase-like (PK-like)	1	1
BRCT domain	DNA/RNA polymerases	1	1
Smc hinge domain	Tropomyosin	1	1
SNARE-like	Domain of the SRP/SRP receptor G-proteins	1	1
N-terminal nucleophile aminohydrolases (Ntn hydrolases)	Adenine nucleotide alpha hydrolases-like	1	1
Nucleotide-diphospho-sugar transferases	ARM repeat	1	1
Translational machinery components	alpha/beta-Hydrolases	1	1
Calponin-homology domain, CH-domain	WW domain	1	1
4Fe-4S ferredoxins	P-loop containing nucleoside triphosphate hydrolases	1	1
Eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment	DNA breaking-rejoining enzymes	1	1
vWA-like	Cysteine-rich domain	1	1
Calponin-homology domain, CH-domain	EB1 dimerisation domain-like	1	1
Metallo-dependent phosphatases	"Winged helix" DNA-binding domain	1	1
SPOC domain-like	SAP domain	1	1
C2 domain (Calcium/lipid-binding domain, CaLB)	P-loop containing nucleoside triphosphate hydrolases	1	1
PRP4-like	Functional domain of the splicing factor Prp18	1	1
Ribonuclease PH domain 2-like	TSP-1 type 1 repeat	1	1
PRP4-like	WD40 repeat-like	1	1
WGR domain-like	Voltage-gated potassium channels	1	1
N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1	Translational machinery components	1	1
Thioredoxin-like	FAD/NAD-linked reductases, dimerisation (C-terminal) domain	1	1
CCCH zinc finger	ISP domain	1	1
beta and beta-prime subunits of DNA dependent RNA-polymerase	beta and beta-prime subunits of DNA dependent RNA-polymerase	1	1
CCHHC domain	CCHHC domain	1	1
RING/U-box	CSL zinc finger	1	1
Growth factor receptor domain	Ankyrin repeat	1	1
4'-phosphopantetheinyl transferase	4'-phosphopantetheinyl transferase	1	1
Cation efflux protein transmembrane domain-like	HAND domain of the nucleosome remodeling ATPase ISWI	1	1
N-terminal nucleophile aminohydrolases (Ntn hydrolases)	FMN-linked oxidoreductases	1	1
PreATP-grasp domain	Rudiment single hybrid motif	1	1
Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain	Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain	1	1
S15/NS1 RNA-binding domain	Class II aaRS and biotin synthetases	1	1
I/LWEQ domain	alpha-catenin/vinculin-like	1	1
Plus3-like	Restriction endonuclease-like	1	1
ADP-ribosylation	ENTH/VHS domain	1	1
Trefoil	Glycosyl hydrolase domain	1	1
SNF-like	P-loop containing nucleoside triphosphate hydrolases	1	1
PDZ domain-like	BAR/IMD domain-like	1	1
Sema domain	GTPase activation domain, GAP	1	1
EF-hand	PLC-like phosphodiesterases	1	1
Protein kinase-like (PK-like)	Zn-dependent exopeptidases	1	1
beta-beta-alpha zinc fingers	Protein kinase-like (PK-like)	1	1
Ribosomal protein L7/12, oligomerisation (N-terminal) domain	ClpS-like	1	1
ARM repeat	Hect, E3 ligase catalytic domain	1	1
GFP-like	EGF/Laminin	1	1
P-loop containing nucleoside triphosphate hydrolases	HAND domain of the nucleosome remodeling ATPase ISWI	1	1
Spermadhesin, CUB domain	LDL receptor-like module	1	1
L domain-like	Heme-dependent peroxidases	1	1
FYVE/PHD zinc finger	UDP-Glycosyltransferase/glycogen phosphorylase	1	1
Acetyl-CoA synthetase-like	ACP-like	1	1
Ribosomal protein S5 domain 2-like	EF-hand	1	1
PH domain-like	C-terminal domain of PLC-beta	1	1
Protein kinase-like (PK-like)	NAD(P)-binding Rossmann-fold domains	1	1
WD40 repeat-like	Bromodomain	1	1
Sema domain	E set domains	1	1
DBL homology domain (DH-domain)	Immunoglobulin	1	1
P-loop containing nucleoside triphosphate hydrolases	Phosphoglycerate mutase-like	1	1
SAM/Pointed domain	RING/U-box	1	1
Domain of poly(ADP-ribose) polymerase	Periplasmic binding protein-like II	1	1
Nucleotidylyl transferase	Class II aaRS ABD-related	1	1
Glutathione synthetase ATP-binding domain-like	Rudiment single hybrid motif	1	1
TPR-like	Protein prenylyltransferase	1	1
Histone-fold	Macro domain-like	1	1
Adenine nucleotide alpha hydrolases-like	GMP synthetase C-terminal dimerisation domain	1	1
POZ domain	Mannose-binding lectins	1	1
Spectrin repeat	GAS2 domain-like	1	1
L domain-like	Actin depolymerizing proteins	1	1
Lipase/lipooxygenase domain (PLAT/LH2 domain)	Lipase/lipooxygenase domain (PLAT/LH2 domain)	1	1
NagB/RpiA/CoA transferase-like	D-ribose-5-phosphate isomerase (RpiA), lid domain	1	1
Plakin repeat	Plakin repeat	1	1
DEK C-terminal domain	SWIB/MDM2 domain	1	1
Concanavalin A-like lectins/glucanases	EF-hand	1	1
Ribosomal protein L25-like	Class II aaRS and biotin synthetases	1	1
GroEL apical domain-like	SAICAR synthase-like	1	1
Protein kinase-like (PK-like)	NTF2-like	1	1
WD40 repeat-like	C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase	1	1
Spectrin repeat	Immunoglobulin	1	1
N-terminal nucleophile aminohydrolases (Ntn hydrolases)	Alpha subunit of glutamate synthase, C-terminal domain	1	1
Glutamine synthetase, N-terminal domain	Glutamine synthetase/guanido kinase	1	1
vWA-like	Immunoglobulin	1	1
TRAF domain-like	Cysteine proteinases	1	1
P-loop containing nucleoside triphosphate hydrolases	LigT-like	1	1
NAD kinase/diacylglycerol kinase-like	Ankyrin repeat	1	1
Supernatant protein factor (SPF), C-terminal domain	NAD(P)-binding Rossmann-fold domains	1	1
TPR-like	"Winged helix" DNA-binding domain	1	1
alpha-helical ferredoxin	4Fe-4S ferredoxins	1	1
Glutathione synthetase ATP-binding domain-like	Phosphoglycerate mutase-like	1	1
S-adenosyl-L-methionine-dependent methyltransferases	ITPase-like	1	1
Acyl-CoA N-acyltransferases (Nat)	EGF/Laminin	1	1
Epsilon subunit of F1F0-ATP synthase N-terminal domain	Epsilon subunit of F1F0-ATP synthase C-terminal domain	1	1
Tricorn protease domain 2	WD40 repeat-like	1	1
PGBD-like	Metalloproteases ("zincins"), catalytic domain	1	1
Kix domain of CBP (creb binding protein)	FYVE/PHD zinc finger	1	1
TSP-1 type 1 repeat	Nop domain	1	1
Class II aaRS and biotin synthetases	C-terminal domain of ProRS	1	1
CAD & PB1 domains	PDZ domain-like	1	1
TPR-like	ARM repeat	1	1
Nicotinate/Quinolinate PRTase N-terminal domain-like	Nicotinate/Quinolinate PRTase C-terminal domain-like	1	1
Acyl-CoA N-acyltransferases (Nat)	Bromodomain	1	1
FAD/NAD(P)-binding domain	EF-hand	1	1
A middle domain of Talin 1	alpha-catenin/vinculin-like	1	1
vWA-like	Nucleic acid-binding proteins	1	1
RCC1/BLIP-II	RCC1/BLIP-II	1	1
Ribosomal protein S5 domain 2-like	DNA mismatch repair protein MutL	1	1
Retrovirus zinc finger-like domains	ISP domain	1	1
GAF domain-like	GAF domain-like	1	1
Ribonuclease H-like	HRDC-like	1	1
2Fe-2S ferredoxin-like	Formate dehydrogenase/DMSO reductase, domains 1-3	1	1
PH domain-like	BSD domain-like	1	1
PLC-like phosphodiesterases	C2 domain (Calcium/lipid-binding domain, CaLB)	1	1
Thiamin pyrophosphokinase, catalytic domain	Thiamin pyrophosphokinase, substrate-binding domain	1	1
Cation efflux protein transmembrane domain-like	Homeodomain-like	1	1
Seven-hairpin glycosidases	PA domain	1	1
Zinc beta-ribbon	Zinc beta-ribbon	1	1
Ribonuclease H-like	SH2 domain	1	1
"Winged helix" DNA-binding domain	GroEL apical domain-like	1	1
WD40 repeat-like	Nucleoporin domain	1	1
Nucleotide-diphospho-sugar transferases	Nucleotide-diphospho-sugar transferases	1	1
Calponin-homology domain, CH-domain	SH2 domain	1	1
Mannose 6-phosphate receptor domain	Mannose 6-phosphate receptor domain	1	1
Hypothetical protein c14orf129, hspc210	TPR-like	1	1
FYVE/PHD zinc finger	Rabenosyn-5 Rab-binding domain-like	1	1
Immunoglobulin	Heme-dependent peroxidases	1	1
Chromo domain-like	Ankyrin repeat	1	1
Ubiquitin-like	"Winged helix" DNA-binding domain	1	1
MIR domain	Concanavalin A-like lectins/glucanases	1	1
HAD-like	BRCT domain	1	1
L domain-like	EGF/Laminin	1	1
S-adenosyl-L-methionine-dependent methyltransferases	WD40 repeat-like	1	1
Galactose-binding domain-like	beta-Galactosidase/glucuronidase domain	1	1
C-type lectin-like	Kringle-like	1	1
Voltage-gated potassium channels	NAD(P)-binding Rossmann-fold domains	1	1
Regulator of G-protein signaling, RGS	PX domain	1	1
Prokaryotic ribosomal protein L17	ValRS/IleRS/LeuRS editing domain	1	1
Growth factor receptor domain	Notch domain	1	1
WGR domain-like	Periplasmic binding protein-like I	1	1
"Winged helix" DNA-binding domain	Moesin tail domain	1	1
Ribonuclease PH domain 2-like	Nop domain	1	1
EF-hand	GAS2 domain-like	1	1
tRNA-binding arm	Class II aaRS and biotin synthetases	1	1
Ribosomal L11/L12e N-terminal domain	Ribosomal protein L11, C-terminal domain	1	1
Calponin-homology domain, CH-domain	Plakin repeat	1	1
mRNA decapping enzyme DcpS N-terminal domain	HIT-like	1	1
Immunoglobulin	Calponin-homology domain, CH-domain	1	1
Tudor/PWWP/MBT	BRCT domain	1	1
Dcp2 domain-like	Nudix	1	1
CCCH zinc finger	ISP transmembrane anchor	1	1
Cytochrome c	Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor	1	1
Spectrin repeat	RING/U-box	1	1
Ankyrin repeat	Caspase-like	1	1
Ankyrin repeat	SAM/Pointed domain	1	1
Pseudouridine synthase	PUA domain-like	1	1
L27 domain	SH3-domain	1	1
Translation initiation factor 2 beta, aIF2beta, N-terminal domain	ARM repeat	1	1
Chaperone J-domain	Sec63 N-terminal domain-like	1	1
GroEL apical domain-like	UDP-Glycosyltransferase/glycogen phosphorylase	1	1
MIR domain	MIR domain	1	1
CCCH zinc finger	Chaperone J-domain	1	1
Ribosomal protein S5 domain 2-like	Type II DNA topoisomerase	1	1
Galactose-binding domain-like	Methyl-accepting chemotaxis protein (MCP) signaling domain	1	1
Domain of the SRP/SRP receptor G-proteins	Signal peptide-binding domain	1	1
Zn-dependent exopeptidases	Zn-dependent exopeptidases	1	1
Ribonuclease H-like	Nucleic acid-binding proteins	1	1
Starch-binding domain-like	PLC-like phosphodiesterases	1	1
MurD-like peptide ligases, catalytic domain	MurD-like peptide ligases, peptide-binding domain	1	1
GST C-terminal domain-like	GST C-terminal domain-like	1	1
Class II aaRS and biotin synthetases	Anticodon-binding domain of PheRS	1	1
Nqo1 middle domain-like	Nqo1C-terminal domain-like	1	1
SAM/Pointed domain	GTPase activation domain, GAP	1	1
Protein kinase-like (PK-like)	Rhodanese/Cell cycle control phosphatase	1	1
Metallo-dependent phosphatases	Thiamin diphosphate-binding fold (THDP-binding)	1	1
P-loop containing nucleoside triphosphate hydrolases	vWA-like	1	1
Lipoxigenase	Lipoxigenase	1	1
N-terminal nucleophile aminohydrolases (Ntn hydrolases)	alpha-helical ferredoxin	1	1
TGS-like	Class II aaRS ABD-related	1	1
SAP domain	Concanavalin A-like lectins/glucanases	1	1
HLH, helix-loop-helix DNA-binding domain	Orange domain-like	1	1
Nqo1 FMN-binding domain-like	Nqo1C-terminal domain-like	1	1
The spindle assembly checkpoint protein mad2	FYVE/PHD zinc finger	1	1
Regulator of G-protein signaling, RGS	PH domain-like	1	1
Nucleotidylyl transferase	Nucleic acid-binding proteins	1	1
DBL homology domain (DH-domain)	C2 domain (Calcium/lipid-binding domain, CaLB)	1	1
Metallo-dependent phosphatases	EF-hand	1	1
Actin-like ATPase domain	AF1104-like	1	1
Putative DNA-binding domain	Cation efflux protein transmembrane domain-like	1	1
Immunoglobulin	Tricorn protease domain 2	1	1
PurM N-terminal domain-like	PurM C-terminal domain-like	1	1
L9 N-domain-like	Phosphoglucomutase, first 3 domains	1	1
L domain-like	P-loop containing nucleoside triphosphate hydrolases	1	1
"Winged helix" DNA-binding domain	E2F-DP heterodimerization region	1	1
vWA-like	BRCA2 helical domain	1	1
Mib/herc2 domain-like	Ankyrin repeat	1	1
Kelch motif	Fibronectin type III	1	1
FAD-linked reductases, C-terminal domain	Ankyrin repeat	1	1
TPR-like	Ankyrin repeat	1	1
SAM/Pointed domain	SH2 domain	1	1
Multidrug resistance efflux transporter EmrE	(Trans)glycosidases	1	1
CCHHC domain	Acyl-CoA N-acyltransferases (Nat)	1	1
RNI-like	RNI-like	1	1
RING/U-box	BRCT domain	1	1
L domain-like	UBA-like	1	1
RNI-like	WD40 repeat-like	1	1
B-box zinc-binding domain	Fibronectin type III	1	1
Glucocorticoid receptor-like (DNA-binding domain)	RNA-binding domain, RBD	1	1
Chaperone J-domain	CSL zinc finger	1	1
RING/U-box	UBA-like	1	1
GST C-terminal domain-like	Class II aaRS and biotin synthetases	1	1
Purple acid phosphatase, N-terminal domain	Metallo-dependent phosphatases	1	1
Spectrin repeat	Plakin repeat	1	1
ARM repeat	L domain-like	1	1
P-loop containing nucleoside triphosphate hydrolases	Class I glutamine amidotransferase-like	1	1
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain	Nucleotidylyl transferase	1	1
Nudix	DNase I-like	1	1
S-adenosylmethionine synthetase	S-adenosylmethionine synthetase	1	1
Inosine monophosphate dehydrogenase (IMPDH)	Inosine monophosphate dehydrogenase (IMPDH)	1	1
Glucocorticoid receptor-like (DNA-binding domain)	VHP, Villin headpiece domain	1	1
Indigoidine synthase A-like	Ribokinase-like	1	1
Metalloproteases ("zincins"), catalytic domain	Hemopexin-like domain	1	1
Ribosomal protein L4	Ribosomal protein L4	1	1
Glutathione synthetase ATP-binding domain-like	NAD(P)-binding Rossmann-fold domains	1	1
S-adenosyl-L-methionine-dependent methyltransferases	Protein kinase-like (PK-like)	1	1
Clathrin heavy-chain terminal domain	ARM repeat	1	1
BEACH domain	Putative isomerase YbhE	1	1
FYSH domain	Hypothetical protein AF0491, middle domain	1	1
Second domain of FERM	alpha-catenin/vinculin-like	1	1
Calponin-homology domain, CH-domain	Calponin-homology domain, CH-domain	1	1
RNA-binding domain, RBD	Ran binding protein zinc finger-like	1	1
ThrRS/AlaRS common domain	Class II aaRS ABD-related	1	1
Protein kinase-like (PK-like)	A DNA-binding domain in eukaryotic transcription factors	1	1
Formin homology 2 domain (FH2 domain)	Vasodilator-stimulated phosphoprotein, VASP, tetramerisation domain	1	1
Ypt/Rab-GAP domain of gyp1p	SH3-domain	1	1
Translational machinery components	Coiled-coil domain of nucleotide exchange factor GrpE	1	1
N-terminal nucleophile aminohydrolases (Ntn hydrolases)	Thiamin diphosphate-binding fold (THDP-binding)	1	1
PreATP-grasp domain	Single hybrid motif	1	1
Nucleotidylyl transferase	An anticodon-binding domain of class I aminoacyl-tRNA synthetases	1	1
eIF4e-like	Protein kinase-like (PK-like)	1	1
E set domains	NHL repeat	1	1
Ribonuclease H-like	SMAD/FHA domain	1	1
FAD/NAD(P)-binding domain	Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain	1	1
C2 domain (Calcium/lipid-binding domain, CaLB)	Chaperone J-domain	1	1
Ribonuclease H-like	"Winged helix" DNA-binding domain	1	1
TPR-like	Band 7/SPFH domain	1	1
Clavaminate synthase-like	Tudor/PWWP/MBT	1	1
HMA, heavy metal-associated domain	Calcium ATPase, transduction domain A	1	1
PH domain-like	NHL repeat	1	1
HAD-like	HAD-like	1	1
Cysteine-rich domain	SAM/Pointed domain	1	1
Multidrug resistance efflux transporter EmrE	beta-Galactosidase/glucuronidase domain	1	1
P-loop containing nucleoside triphosphate hydrolases	ArfGap/RecO-like zinc finger	1	1
alpha/beta-Hydrolases	TSP-1 type 1 repeat	1	1
Aconitase iron-sulfur domain	LeuD/IlvD-like	1	1
RING/U-box	Concanavalin A-like lectins/glucanases	1	1
Ankyrin repeat	Cap-Gly domain	1	1
BAR/IMD domain-like	Ankyrin repeat	1	1
SMAD/FHA domain	Protein kinase-like (PK-like)	1	1
Periplasmic binding protein-like I	Nucleotide cyclase	1	1
TSP-1 type 1 repeat	BPTI-like	1	1
ENTH/VHS domain	RNA-binding domain, RBD	1	1