Domain combination pairs in Hymenolepis microstoma

All pairs of domain combinations at the superfamily level are listed here.
The identification of domain pairs does not account for the possibility of non-contiguous domains. Inserted, or interlaced, domains are seen as having a simple pair ordering.

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Domain combination pairs

1500 domain combination pairs.
Click on a column heading to sort that column, or the 'View' button to see domain architetures for that domain pair combination.

Superfamily (N)	Superfamily (C)	Number of occurrances	Number unique
beta-beta-alpha zinc fingers	beta-beta-alpha zinc fingers	75	24
P-loop containing nucleoside triphosphate hydrolases	P-loop containing nucleoside triphosphate hydrolases	69	38
RNA-binding domain, RBD	RNA-binding domain, RBD	45	24
Immunoglobulin	Immunoglobulin	40	34
Cadherin-like	Cadherin-like	38	23
Actin-like ATPase domain	Actin-like ATPase domain	30	12
EGF/Laminin	EGF/Laminin	24	21
POZ domain	Kelch motif	24	9
Tubulin nucleotide-binding domain-like	Tubulin C-terminal domain-like	24	4
ARM repeat	ARM repeat	23	14
DNA/RNA polymerases	Ribonuclease H-like	22	11
C2 domain (Calcium/lipid-binding domain, CaLB)	C2 domain (Calcium/lipid-binding domain, CaLB)	21	9
Second domain of FERM	PH domain-like	20	15
Fibronectin type III	Fibronectin type III	20	17
TPR-like	TPR-like	18	11
WD40 repeat-like	WD40 repeat-like	18	12
SH3-domain	SH2 domain	17	10
PDZ domain-like	PDZ domain-like	17	15
SH3-domain	Protein kinase-like (PK-like)	16	8
SH2 domain	Protein kinase-like (PK-like)	16	9
Glucocorticoid receptor-like (DNA-binding domain)	Glucocorticoid receptor-like (DNA-binding domain)	16	12
Immunoglobulin	Fibronectin type III	16	15
Ubiquitin-like	Second domain of FERM	15	11
HAD-like	Calcium ATPase, transmembrane domain M	15	6
EF-hand	EF-hand	15	9
Ypt/Rab-GAP domain of gyp1p	Ypt/Rab-GAP domain of gyp1p	15	9
Calcium ATPase, transduction domain A	Calcium ATPase, transmembrane domain M	15	6
Ubiquitin-like	PH domain-like	14	9
Calcium ATPase, transduction domain A	Metal cation-transporting ATPase, ATP-binding domain N	14	5
Calcium ATPase, transduction domain A	HAD-like	14	5
FYVE/PHD zinc finger	FYVE/PHD zinc finger	14	14
Metal cation-transporting ATPase, ATP-binding domain N	HAD-like	14	5
Protein kinase-like (PK-like)	Protein kinase-like (PK-like)	14	8
Metal cation-transporting ATPase, ATP-binding domain N	Calcium ATPase, transmembrane domain M	14	5
Ubiquitin-like	Ubiquitin-like	13	7
Growth factor receptor domain	Growth factor receptor domain	13	13
Cyclin-like	Cyclin-like	13	8
P-loop containing nucleoside triphosphate hydrolases	Translation proteins	13	10
ARM repeat	Protein kinase-like (PK-like)	13	11
PH domain-like	PH domain-like	12	11
Spectrin repeat	Spectrin repeat	12	11
Nicotinic receptor ligand binding domain-like	Neurotransmitter-gated ion-channel transmembrane pore	12	6
Ankyrin repeat	Ankyrin repeat	12	10
RING/U-box	RING/U-box	11	9
ABC transporter transmembrane region	P-loop containing nucleoside triphosphate hydrolases	11	8
DBL homology domain (DH-domain)	PH domain-like	11	11
Voltage-gated potassium channels	Voltage-gated potassium channels	11	8
GroEL equatorial domain-like	GroEL-intermediate domain like	10	1
GroEL equatorial domain-like	GroEL apical domain-like	10	1
POZ domain	Voltage-gated potassium channels	10	3
SH3-domain	SH3-domain	10	10
Eukaryotic type KH-domain (KH-domain type I)	Eukaryotic type KH-domain (KH-domain type I)	10	8
GroEL-intermediate domain like	GroEL apical domain-like	10	1
Cullin repeat-like	Cullin homology domain	10	4
Thioredoxin-like	GST C-terminal domain-like	10	3
Glucocorticoid receptor-like (DNA-binding domain)	Nuclear receptor ligand-binding domain	9	6
Nucleic acid-binding proteins	P-loop containing nucleoside triphosphate hydrolases	9	2
Cullin homology domain	"Winged helix" DNA-binding domain	9	4
L domain-like	L domain-like	9	9
EF-hand	DLC	9	2
PH domain-like	SH2 domain	8	8
Transducin (alpha subunit), insertion domain	P-loop containing nucleoside triphosphate hydrolases	8	2
BPTI-like	BPTI-like	8	7
Acid proteases	DNA/RNA polymerases	8	3
SH3-domain	P-loop containing nucleoside triphosphate hydrolases	8	7
Calponin-homology domain, CH-domain	Spectrin repeat	8	7
MFS general substrate transporter	MFS general substrate transporter	8	5
Growth factor receptor domain	EGF/Laminin	8	8
Nucleotidylyl transferase	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	8	6
Concanavalin A-like lectins/glucanases	Concanavalin A-like lectins/glucanases	8	8
Homeodomain-like	Homeodomain-like	8	8
Cullin repeat-like	"Winged helix" DNA-binding domain	8	3
Voltage-gated potassium channels	cAMP-binding domain-like	8	5
cAMP-binding domain-like	cAMP-binding domain-like	7	6
lambda repressor-like DNA-binding domains	Homeodomain-like	7	4
(Phosphotyrosine protein) phosphatases II	(Phosphotyrosine protein) phosphatases II	7	7
Cysteine-rich domain	Protein kinase-like (PK-like)	7	7
Nucleotidyltransferase	PAP/OAS1 substrate-binding domain	7	4
NAD(P)-binding Rossmann-fold domains	LDH C-terminal domain-like	7	2
NAD(P)-binding Rossmann-fold domains	6-phosphogluconate dehydrogenase C-terminal domain-like	7	4
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase	Ribosomal protein S5 domain 2-like	7	7
Nucleic acid-binding proteins	Nucleic acid-binding proteins	7	5
Chromo domain-like	Chromo domain-like	7	5
L domain-like	Immunoglobulin	7	2
FYVE/PHD zinc finger	Bromodomain	7	7
Periplasmic binding protein-like I	Periplasmic binding protein-like II	7	6
Fibronectin type III	(Phosphotyrosine protein) phosphatases II	6	6
C-type lectin-like	C-type lectin-like	6	3
RING/U-box	FYVE/PHD zinc finger	6	6
PK beta-barrel domain-like	Phosphoenolpyruvate/pyruvate domain	6	3
HSP40/DnaJ peptide-binding domain	HSP40/DnaJ peptide-binding domain	6	5
Cysteine proteinases	Calpain large subunit, middle domain (domain III)	6	5
C2 domain (Calcium/lipid-binding domain, CaLB)	Protein kinase-like (PK-like)	6	6
Leukotriene A4 hydrolase N-terminal domain	Metalloproteases ("zincins"), catalytic domain	6	3
PDZ domain-like	P-loop containing nucleoside triphosphate hydrolases	6	6
TSP-1 type 1 repeat	TSP-1 type 1 repeat	6	6
BRCT domain	BRCT domain	6	6
F-box domain	WD40 repeat-like	6	5
BAR/IMD domain-like	SH3-domain	6	4
Voltage-gated potassium channels	Periplasmic binding protein-like II	6	5
PDZ domain-like	SH3-domain	6	6
Immunoglobulin	Protein kinase-like (PK-like)	6	5
LDL receptor-like module	LDL receptor-like module	6	6
LuxS/MPP-like metallohydrolase	LuxS/MPP-like metallohydrolase	6	3
DNA repair protein MutS, domain III	P-loop containing nucleoside triphosphate hydrolases	6	4
Thioredoxin-like	Thioredoxin-like	6	5
EGF/Laminin	TSP-1 type 1 repeat	6	4
ABC transporter transmembrane region	ABC transporter transmembrane region	6	5
SAM/Pointed domain	SAM/Pointed domain	5	5
P-loop containing nucleoside triphosphate hydrolases	EF-G C-terminal domain-like	5	4
ValRS/IleRS/LeuRS editing domain	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	5	3
Cysteine-rich domain	Cysteine-rich domain	5	5
Ankyrin repeat	Protein kinase-like (PK-like)	5	5
P-loop containing nucleoside triphosphate hydrolases	EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain	5	3
Spectrin repeat	EF-hand	5	4
Metalloproteases ("zincins"), catalytic domain	Blood coagulation inhibitor (disintegrin)	5	2
CRAL/TRIO N-terminal domain	CRAL/TRIO domain	5	4
PH domain-like	Protein kinase-like (PK-like)	5	5
L domain-like	Growth factor receptor domain	5	5
Bromodomain	Bromodomain	5	4
Chaperone J-domain	HSP40/DnaJ peptide-binding domain	5	4
P-loop containing nucleoside triphosphate hydrolases	WD40 repeat-like	5	5
Actin-like ATPase domain	Heat shock protein 70kD (HSP70), C-terminal subdomain	5	3
Fibronectin type III	Protein kinase-like (PK-like)	5	5
P-loop containing nucleoside triphosphate hydrolases	Ankyrin repeat	5	5
Translation proteins	EF-G C-terminal domain-like	5	4
L domain-like	Protein kinase-like (PK-like)	5	5
E set domains	E set domains	5	5
P-loop containing nucleoside triphosphate hydrolases	Ribosomal protein S5 domain 2-like	5	4
Periplasmic binding protein-like I	Voltage-gated potassium channels	5	4
Phospholipase D/nuclease	Phospholipase D/nuclease	5	4
Phosphoenolpyruvate/pyruvate domain	PK C-terminal domain-like	5	2
Formate/glycerate dehydrogenase catalytic domain-like	NAD(P)-binding Rossmann-fold domains	5	3
SH2 domain	SH2 domain	5	4
Glucocorticoid receptor-like (DNA-binding domain)	Homeodomain-like	5	4
PK beta-barrel domain-like	PK C-terminal domain-like	5	2
Translation proteins	EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain	5	3
Growth factor receptor domain	Protein kinase-like (PK-like)	5	5
Actin-like ATPase domain	Heat shock protein 70kD (HSP70), peptide-binding domain	5	3
PH domain-like	SH3-domain	5	5
ARM repeat	WD40 repeat-like	5	5
"Winged helix" DNA-binding domain	"Winged helix" DNA-binding domain	5	4
TPR-like	SET domain	5	3
Aminoacid dehydrogenase-like, N-terminal domain	NAD(P)-binding Rossmann-fold domains	5	2
EF-G C-terminal domain-like	EF-G C-terminal domain-like	5	4
ValRS/IleRS/LeuRS editing domain	Nucleotidylyl transferase	5	3
P-loop containing nucleoside triphosphate hydrolases	post-AAA+ oligomerization domain-like	5	2
Spectrin repeat	PH domain-like	5	5
DNA ligase/mRNA capping enzyme, catalytic domain	Nucleic acid-binding proteins	4	4
RING/U-box	B-box zinc-binding domain	4	4
UBC-like	RING/U-box	4	4
GroES-like	NAD(P)-binding Rossmann-fold domains	4	3
Chromo domain-like	P-loop containing nucleoside triphosphate hydrolases	4	4
Class II aaRS and biotin synthetases	Class II aaRS ABD-related	4	4
TAZ domain	Kix domain of CBP (creb binding protein)	4	3
P-loop containing nucleoside triphosphate hydrolases	"Winged helix" DNA-binding domain	4	4
P-loop containing nucleoside triphosphate hydrolases	Sec63 N-terminal domain-like	4	4
Calponin-homology domain, CH-domain	EF-hand	4	3
ENTH/VHS domain	GAT-like domain	4	4
CBS-domain pair	CBS-domain pair	4	3
Zn-finger domain of Sec23/24	vWA-like	4	3
Riboflavin synthase domain-like	Ferredoxin reductase-like, C-terminal NADP-linked domain	4	4
RING/U-box	WD40 repeat-like	4	4
Subtilisin-like	Galactose-binding domain-like	4	3
SNARE-like	Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor	4	2
Cysteine-rich domain	C2 domain (Calcium/lipid-binding domain, CaLB)	4	3
Glutathione synthetase ATP-binding domain-like	Succinyl-CoA synthetase domains	4	2
Translation proteins	Ribosomal protein S5 domain 2-like	4	3
BEACH domain	WD40 repeat-like	4	4
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase	HSP90 C-terminal domain	4	4
P-loop containing nucleoside triphosphate hydrolases	Smc hinge domain	4	3
Myosin rod fragments	Myosin rod fragments	4	4
Sec7 domain	PH domain-like	4	2
SMAD MH1 domain	SMAD/FHA domain	4	3
PIN domain-like	5' to 3' exonuclease, C-terminal subdomain	4	4
Integrin alpha N-terminal domain	Integrin domains	4	3
Ubiquitin-like	Protein kinase-like (PK-like)	4	4
HSP20-like chaperones	HSP20-like chaperones	4	1
HMG-box	HMG-box	4	2
FAD/NAD(P)-binding domain	FAD-linked reductases, C-terminal domain	4	4
Protein kinase-like (PK-like)	P-loop containing nucleoside triphosphate hydrolases	4	4
F-box domain	RNI-like	4	3
beta-sandwich domain of Sec23/24	Zn-finger domain of Sec23/24	4	3
Ribosomal protein S5 domain 2-like	GHMP Kinase, C-terminal domain	4	3
WW domain	WW domain	4	4
Concanavalin A-like lectins/glucanases	PH domain-like	4	4
Concanavalin A-like lectins/glucanases	P-domain of calnexin/calreticulin	4	2
NAD(P)-binding Rossmann-fold domains	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain	4	2
Calponin-homology domain, CH-domain	PH domain-like	4	4
DBL homology domain (DH-domain)	SH3-domain	4	4
Protein kinase-like (PK-like)	KA1-like	4	3
EF-G C-terminal domain-like	Ribosomal protein S5 domain 2-like	4	3
EGF/Laminin	Concanavalin A-like lectins/glucanases	4	4
Heat shock protein 70kD (HSP70), peptide-binding domain	Heat shock protein 70kD (HSP70), C-terminal subdomain	4	2
POZ domain	Skp1 dimerisation domain-like	4	2
PH domain-like	BEACH domain	4	4
Cysteine proteinases	EF-hand	4	3
DNA/RNA polymerases	Lesion bypass DNA polymerase (Y-family), little finger domain	4	2
Kelch motif	Kelch motif	4	3
Domain of poly(ADP-ribose) polymerase	ADP-ribosylation	4	4
Ribosomal protein S5 domain 2-like	HSP90 C-terminal domain	4	4
FYVE/PHD zinc finger	P-loop containing nucleoside triphosphate hydrolases	4	4
(Trans)glycosidases	Glycosyl hydrolase domain	4	4
beta-sandwich domain of Sec23/24	vWA-like	4	3
Protein kinase-like (PK-like)	Nucleotide cyclase	4	4
Calponin-homology domain, CH-domain	GAS2 domain-like	3	3
P-loop containing nucleoside triphosphate hydrolases	FtsH protease domain-like	3	1
vWA-like	C-terminal, gelsolin-like domain of Sec23/24	3	2
Nucleic acid-binding proteins	Translation proteins SH3-like domain	3	3
EF-hand	P-loop containing nucleoside triphosphate hydrolases	3	3
Growth factor receptor domain	Fibronectin type III	3	3
Thioredoxin-like	Ubiquitin-like	3	2
RING/U-box	P-loop containing nucleoside triphosphate hydrolases	3	3
ArfGap/RecO-like zinc finger	Ankyrin repeat	3	3
ARID-like	Clavaminate synthase-like	3	2
beta-sandwich domain of Sec23/24	Helical domain of Sec23/24	3	2
FKBP-like	TPR-like	3	2
ARM repeat	PH domain-like	3	3
RING/U-box	TRAF domain-like	3	3
FAS1 domain	FAS1 domain	3	3
TAZ domain	Bromodomain	3	3
Cysteine-rich domain	GTPase activation domain, GAP	3	3
TAZ domain	RING/U-box	3	3
P-loop containing nucleoside triphosphate hydrolases	TGS-like	3	1
Enolase N-terminal domain-like	Enolase C-terminal domain-like	3	1
Multidrug efflux transporter AcrB transmembrane domain	Multidrug efflux transporter AcrB transmembrane domain	3	3
P-loop containing nucleoside triphosphate hydrolases	C-terminal domain of alpha and beta subunits of F1 ATP synthase	3	2
GTPase activation domain, GAP	SH2 domain	3	3
ARID-like	FYVE/PHD zinc finger	3	2
CoA-dependent acyltransferases	CoA-dependent acyltransferases	3	2
PH domain-like	Oxysterol-binding protein-like	3	2
Retrovirus zinc finger-like domains	Retrovirus zinc finger-like domains	3	3
Nucleotide-diphospho-sugar transferases	Ricin B-like lectins	3	1
Sec63 N-terminal domain-like	E set domains	3	3
ATP-dependent DNA ligase DNA-binding domain	DNA ligase/mRNA capping enzyme, catalytic domain	3	3
Clc chloride channel	CBS-domain pair	3	2
Calpain large subunit, middle domain (domain III)	EF-hand	3	2
Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain	Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain	3	3
Myosin rod fragments	Tropomyosin	3	3
TPR-like	HCP-like	3	3
FYVE/PHD zinc finger	C2 domain (Calcium/lipid-binding domain, CaLB)	3	2
RING/U-box	Cysteine proteinases	3	3
Ankyrin repeat	PDZ domain-like	3	1
FYVE/PHD zinc finger	Tudor/PWWP/MBT	3	3
TAZ domain	TAZ domain	3	3
CCCH zinc finger	CCCH zinc finger	3	3
P-loop containing nucleoside triphosphate hydrolases	PH domain-like	3	3
DLC	DLC	3	2
Helical domain of Sec23/24	C-terminal, gelsolin-like domain of Sec23/24	3	2
PreATP-grasp domain	Glutathione synthetase ATP-binding domain-like	3	3
Actin depolymerizing proteins	Actin depolymerizing proteins	3	3
HLH, helix-loop-helix DNA-binding domain	PYP-like sensor domain (PAS domain)	3	3
Ribosomal protein S5 domain 2-like	Ribonuclease PH domain 2-like	3	2
EF-hand	RING/U-box	3	3
NAD(P)-binding Rossmann-fold domains	UDP-glucose/GDP-mannose dehydrogenase C-terminal domain	3	3
ARM repeat	Toll/Interleukin receptor TIR domain	3	3
dsRNA-binding domain-like	dsRNA-binding domain-like	3	3
SNARE fusion complex	SNARE fusion complex	3	3
cAMP-binding domain-like	Protein kinase-like (PK-like)	3	2
ThrRS/AlaRS common domain	Class II aaRS and biotin synthetases	3	2
ARM repeat	Clathrin adaptor appendage domain	3	3
RNase III domain-like	RNase III domain-like	3	2
L27 domain	PDZ domain-like	3	3
vWA-like	Helical domain of Sec23/24	3	2
TATA-box binding protein-like	TATA-box binding protein-like	3	3
Creatinase/aminopeptidase	"Winged helix" DNA-binding domain	3	2
Zn-finger domain of Sec23/24	C-terminal, gelsolin-like domain of Sec23/24	3	2
ARM repeat	SAM/Pointed domain	3	3
Metallo-dependent hydrolases	Composite domain of metallo-dependent hydrolases	3	3
Bromodomain	RING/U-box	3	3
beta-sandwich domain of Sec23/24	C-terminal, gelsolin-like domain of Sec23/24	3	2
ArfGap/RecO-like zinc finger	PH domain-like	3	3
PAZ domain	Ribonuclease H-like	3	2
Immunoglobulin	LDL receptor-like module	3	3
Zn-finger domain of Sec23/24	Helical domain of Sec23/24	3	2
C2 domain (Calcium/lipid-binding domain, CaLB)	GTPase activation domain, GAP	3	2
PH domain-like	WD40 repeat-like	3	3
FYVE/PHD zinc finger	Clavaminate synthase-like	3	2
Ankyrin repeat	DEATH domain	3	3
Tropomyosin	Tropomyosin	3	2
N-terminal domain of alpha and beta subunits of F1 ATP synthase	P-loop containing nucleoside triphosphate hydrolases	3	2
Spermadhesin, CUB domain	Spermadhesin, CUB domain	3	3
PDZ domain-like	PH domain-like	3	3
DPP6 N-terminal domain-like	alpha/beta-Hydrolases	3	3
FYVE/PHD zinc finger	SET domain	3	3
Thiolase-like	Thiolase-like	3	2
SAM/Pointed domain	Toll/Interleukin receptor TIR domain	3	3
N-terminal domain of alpha and beta subunits of F1 ATP synthase	C-terminal domain of alpha and beta subunits of F1 ATP synthase	3	2
Cysteine proteinases	Cysteine proteinases	3	3
Phosphoglucomutase, first 3 domains	Phosphoglucomutase, first 3 domains	3	3
Intermediate filament protein, coiled coil region	Lamin A/C globular tail domain	3	2
Galactose-binding domain-like	Growth factor receptor domain	3	2
Ribonuclease H-like	Ribonuclease H-like	3	3
RCC1/BLIP-II	Hect, E3 ligase catalytic domain	3	2
PriA/YqbF domain	GINS helical bundle-like	3	2
RNA-binding domain, RBD	PABC (PABP) domain	3	3
WD40 repeat-like	Protein kinase-like (PK-like)	3	3
Phosphoglucomutase, first 3 domains	Phosphoglucomutase, C-terminal domain	3	3
P-loop containing nucleoside triphosphate hydrolases	E set domains	3	3
ATP-dependent DNA ligase DNA-binding domain	Nucleic acid-binding proteins	3	3
Insert subdomain of RNA polymerase alpha subunit	RBP11-like subunits of RNA polymerase	3	2
Terpenoid cyclases/Protein prenyltransferases	Alpha-macroglobulin receptor domain	3	2
6-phosphogluconate dehydrogenase C-terminal domain-like	UDP-glucose/GDP-mannose dehydrogenase C-terminal domain	3	3
Intermediate filament protein, coiled coil region	Intermediate filament protein, coiled coil region	3	2
Thioredoxin-like	Galactose-binding domain-like	2	2
Concanavalin A-like lectins/glucanases	BEACH domain	2	2
ARM repeat	Ankyrin repeat	2	2
Chaperone J-domain	Thioredoxin-like	2	1
Integrin domains	Integrin domains	2	2
Mib/herc2 domain-like	Mib/herc2 domain-like	2	2
PH domain-like	Ankyrin repeat	2	2
Ankyrin repeat	S-adenosyl-L-methionine-dependent methyltransferases	2	2
Activating enzymes of the ubiquitin-like proteins	Activating enzymes of the ubiquitin-like proteins	2	2
Glycoside hydrolase/deacetylase	Galactose mutarotase-like	2	2
Bromodomain	Tudor/PWWP/MBT	2	2
Homeodomain-like	FYVE/PHD zinc finger	2	2
SH3-domain	Isochorismatase-like hydrolases	2	2
Second domain of FERM	A middle domain of Talin 1	2	2
PDZ domain-like	"Winged helix" DNA-binding domain	2	2
EF-hand	Mitochondrial carrier	2	2
Neurotransmitter-gated ion-channel transmembrane pore	Neurotransmitter-gated ion-channel transmembrane pore	2	2
Chaperone J-domain	DnaJ/Hsp40 cysteine-rich domain	2	1
Regulator of G-protein signaling, RGS	Protein kinase-like (PK-like)	2	2
Class II aaRS and biotin synthetases	Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)	2	1
PH domain-like	Ras GEF	2	2
Mib/herc2 domain-like	RING/U-box	2	2
WW domain	Hect, E3 ligase catalytic domain	2	2
Immunoglobulin	TSP-1 type 1 repeat	2	2
TPR-like	Fic-like	2	1
SH3-domain	EF-hand	2	2
Translation initiation factor 2 beta, aIF2beta, N-terminal domain	Zinc-binding domain of translation initiation factor 2 beta	2	2
PYP-like sensor domain (PAS domain)	Voltage-gated potassium channels	2	1
SMAD/FHA domain	"Winged helix" DNA-binding domain	2	2
Eukaryotic type KH-domain (KH-domain type I)	Tudor/PWWP/MBT	2	1
Nucleotidylyl transferase	Nucleotidylyl transferase	2	2
alpha-catenin/vinculin-like	alpha-catenin/vinculin-like	2	2
C2 domain (Calcium/lipid-binding domain, CaLB)	EGF/Laminin	2	1
ADC-like	Cdc48 domain 2-like	2	1
Arp2/3 complex subunits	Arp2/3 complex subunits	2	2
Galactose-binding domain-like	Galactose-binding domain-like	2	2
PP2C-like	PP2C-like	2	2
E set domains	AMPKBI-like	2	1
CRAL/TRIO domain	GTPase activation domain, GAP	2	1
Class II aaRS and biotin synthetases	Translation proteins	2	1
RNA-binding domain, RBD	Cyclophilin-like	2	2
Immunoglobulin	EGF/Laminin	2	2
Galactose mutarotase-like	Glycosyl hydrolase domain	2	2
Bet v1-like	Cysteine proteinases	2	2
vWA-like	SPOC domain-like	2	2
Glutaminase/Asparaginase	Ankyrin repeat	2	1
"Winged helix" DNA-binding domain	PH domain-like	2	2
Ankyrin repeat	HIT/MYND zinc finger-like	2	2
ARM repeat	Formin homology 2 domain (FH2 domain)	2	2
Ypt/Rab-GAP domain of gyp1p	Rhodanese/Cell cycle control phosphatase	2	2
beta-beta-alpha zinc fingers	Homeodomain-like	2	2
FAD/NAD(P)-binding domain	FAD/NAD-linked reductases, dimerisation (C-terminal) domain	2	2
Galactose mutarotase-like	(Trans)glycosidases	2	2
Mitochondrial carrier	Mitochondrial carrier	2	1
Families 57/38 glycoside transferase middle domain	Galactose mutarotase-like	2	2
Cap-Gly domain	Cap-Gly domain	2	2
EF-hand	WD40 repeat-like	2	2
CRAL/TRIO domain	(Phosphotyrosine protein) phosphatases II	2	2
PH domain-like	C2 domain (Calcium/lipid-binding domain, CaLB)	2	2
WGR domain-like	Domain of poly(ADP-ribose) polymerase	2	2
Chromo domain-like	Acyl-CoA N-acyltransferases (Nat)	2	2
Domain of the SRP/SRP receptor G-proteins	P-loop containing nucleoside triphosphate hydrolases	2	2
P-loop containing nucleoside triphosphate hydrolases	RNA-binding domain, RBD	2	2
beta-N-acetylhexosaminidase-like domain	(Trans)glycosidases	2	2
A middle domain of Talin 1	I/LWEQ domain	2	2
Translational machinery components	L30e-like	2	2
Cysteine proteinases	UBA-like	2	2
CRAL/TRIO N-terminal domain	(Phosphotyrosine protein) phosphatases II	2	2
PAP/OAS1 substrate-binding domain	PAP/Archaeal CCA-adding enzyme, C-terminal domain	2	2
WD40 repeat-like	FYVE/PHD zinc finger	2	2
Glycoside hydrolase/deacetylase	Families 57/38 glycoside transferase middle domain	2	2
RUN domain-like	Ypt/Rab-GAP domain of gyp1p	2	2
Kix domain of CBP (creb binding protein)	RING/U-box	2	2
SNARE-like	SNARE fusion complex	2	1
Cryptochrome/photolyase, N-terminal domain	Cryptochrome/photolyase FAD-binding domain	2	2
DUSP-like	Cysteine proteinases	2	2
DNA repair protein MutS, domain I	DNA repair protein MutS, domain II	2	1
Homeodomain-like	(Phosphotyrosine protein) phosphatases II	2	2
Arginase/deacetylase	Arginase/deacetylase	2	2
PH domain-like	A middle domain of Talin 1	2	2
"Winged helix" DNA-binding domain	E set domains	2	2
CRAL/TRIO domain	Supernatant protein factor (SPF), C-terminal domain	2	1
AN1-like Zinc finger	AN1-like Zinc finger	2	1
Leukotriene A4 hydrolase N-terminal domain	ARM repeat	2	1
Retrovirus zinc finger-like domains	P-loop containing nucleoside triphosphate hydrolases	2	1
N-terminal, heterodimerisation domain of RBP7 (RpoE)	Nucleic acid-binding proteins	2	1
ARM repeat	Subdomain of clathrin and coatomer appendage domain	2	2
C2 domain (Calcium/lipid-binding domain, CaLB)	Hect, E3 ligase catalytic domain	2	2
P-loop containing nucleoside triphosphate hydrolases	Initiation factor IF2/eIF5b, domain 3	2	2
BAR/IMD domain-like	GTPase activation domain, GAP	2	2
DnaJ/Hsp40 cysteine-rich domain	HSP40/DnaJ peptide-binding domain	2	1
Ubiquitin-like	UBA-like	2	2
FYVE/PHD zinc finger	HIT/MYND zinc finger-like	2	2
PH domain-like	GTPase activation domain, GAP	2	2
CRAL/TRIO N-terminal domain	Supernatant protein factor (SPF), C-terminal domain	2	1
Multidrug resistance efflux transporter EmrE	Multidrug resistance efflux transporter EmrE	2	2
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)	Translation proteins	2	1
Succinyl-CoA synthetase domains	NAD(P)-binding Rossmann-fold domains	2	2
Calpain large subunit, middle domain (domain III)	Calpain large subunit, middle domain (domain III)	2	2
Concanavalin A-like lectins/glucanases	WD40 repeat-like	2	2
Ubiquitin-like	DBL homology domain (DH-domain)	2	2
Tudor/PWWP/MBT	Tudor/PWWP/MBT	2	2
Tudor/PWWP/MBT	SAM/Pointed domain	2	2
POZ domain	Galactose oxidase, central domain	2	2
DNA repair protein MutS, domain I	P-loop containing nucleoside triphosphate hydrolases	2	1
RCC1/BLIP-II	Chaperone J-domain	2	1
Ubiquitin-like	P-loop containing nucleoside triphosphate hydrolases	2	2
Clathrin adaptor appendage domain	Subdomain of clathrin and coatomer appendage domain	2	2
Immunoglobulin	Growth factor receptor domain	2	2
EF-hand	PH domain-like	2	2
Nucleic acid-binding proteins	Class II aaRS and biotin synthetases	2	2
Metallo-dependent phosphatases	FYVE/PHD zinc finger	2	2
DNA repair protein MutS, domain II	P-loop containing nucleoside triphosphate hydrolases	2	1
Sema domain	Plexin repeat	2	2
RING/U-box	Ankyrin repeat	2	2
"Winged helix" DNA-binding domain	Protein kinase-like (PK-like)	2	2
P-loop containing nucleoside triphosphate hydrolases	TPR-like	2	2
"Winged helix" DNA-binding domain	Sec63 N-terminal domain-like	2	2
Nucleotide cyclase	Nucleotide cyclase	2	2
Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)	2	2
Putative DNA-binding domain	SAND domain-like	2	2
SH2 domain	(Phosphotyrosine protein) phosphatases II	2	1
Notch domain	Ankyrin repeat	2	2
POZ domain	WD40 repeat-like	2	2
alpha-helical ferredoxin	FMN-linked oxidoreductases	2	2
Periplasmic binding protein-like II	Periplasmic binding protein-like II	2	2
Translation proteins	ThrRS/AlaRS common domain	2	1
Tex N-terminal region-like	Ribonuclease H-like	2	2
RNI-like	ARM repeat	2	2
Second domain of FERM	Moesin tail domain	2	2
HAD-like	P-loop containing nucleoside triphosphate hydrolases	2	2
FF domain	FF domain	2	2
Nucleotide-binding domain	FMN-linked oxidoreductases	2	2
R1 subunit of ribonucleotide reductase, N-terminal domain	PFL-like glycyl radical enzymes	2	1
Cdc48 domain 2-like	P-loop containing nucleoside triphosphate hydrolases	2	1
Sec63 N-terminal domain-like	Sec63 N-terminal domain-like	2	2
FAD/NAD(P)-binding domain	FAD/NAD(P)-binding domain	2	2
RuvA domain 2-like	RuvA domain 2-like	2	2
Cation efflux protein transmembrane domain-like	Cation efflux protein cytoplasmic domain-like	2	2
Nicotinic receptor ligand binding domain-like	Nicotinic receptor ligand binding domain-like	2	2
P-loop containing nucleoside triphosphate hydrolases	Bromodomain	2	2
Chaperone J-domain	Homeodomain-like	2	2
Cysteine-rich domain	SH2 domain	2	2
Second domain of FERM	DBL homology domain (DH-domain)	2	2
RNA-binding domain, RBD	SPOC domain-like	2	2
HCP-like	HCP-like	2	2
P-loop containing nucleoside triphosphate hydrolases	PUA domain-like	2	2
PH domain-like	FYVE/PHD zinc finger	2	2
Ribonuclease H-like	RuvA domain 2-like	2	2
PYP-like sensor domain (PAS domain)	cAMP-binding domain-like	2	1
RBP11-like subunits of RNA polymerase	RBP11-like subunits of RNA polymerase	2	1
P-loop containing nucleoside triphosphate hydrolases	Myosin rod fragments	2	2
Second domain of FERM	Concanavalin A-like lectins/glucanases	2	2
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)	ThrRS/AlaRS common domain	2	1
Ras GEF	Ras GEF	2	2
Nucleotidylyl transferase	Ribosomal protein L25-like	2	2
Protein kinase-like (PK-like)	Polo-box domain	2	2
ARM repeat	P-loop containing nucleoside triphosphate hydrolases	2	2
Cysteine-rich DNA binding domain, (DM domain)	Cysteine-rich DNA binding domain, (DM domain)	2	2
WW domain	FF domain	2	2
BAR/IMD domain-like	PH domain-like	2	2
Acid proteases	Acid proteases	2	1
Protein prenylyltransferase	Outer arm dynein light chain 1	2	1
RING/U-box	RNA-binding domain, RBD	2	2
PH domain-like	Moesin tail domain	2	2
Kix domain of CBP (creb binding protein)	Bromodomain	2	2
Sec7 domain	ARM repeat	2	2
EF-hand	C2 domain (Calcium/lipid-binding domain, CaLB)	2	2
Nucleotidyltransferase	PAP/Archaeal CCA-adding enzyme, C-terminal domain	2	2
alpha-helical ferredoxin	Nucleotide-binding domain	2	2
Ubiquitin-like	PDZ domain-like	2	2
WW domain	GTPase activation domain, GAP	2	2
DNA repair protein MutS, domain I	DNA repair protein MutS, domain III	2	1
Cysteine-rich domain	Ubiquitin-like	2	2
TPR-like	RING/U-box	2	2
ARM repeat	BEACH domain	2	2
Zinc beta-ribbon	Cyclin-like	2	2
Regulator of G-protein signaling, RGS	Ubiquitin-like	2	2
EGF/Laminin	Notch domain	2	2
HAD-like	Calpain large subunit, middle domain (domain III)	2	2
Surp module (SWAP domain)	Surp module (SWAP domain)	2	2
Metalloproteases ("zincins"), catalytic domain	ARM repeat	2	1
NagB/RpiA/CoA transferase-like	NagB/RpiA/CoA transferase-like	2	1
Nucleic acid-binding proteins	Eukaryotic type KH-domain (KH-domain type I)	2	1
Ran binding protein zinc finger-like	Ran binding protein zinc finger-like	2	2
Creatinase/prolidase N-terminal domain	Creatinase/aminopeptidase	2	2
C2 domain (Calcium/lipid-binding domain, CaLB)	ARM repeat	2	2
I/LWEQ domain	I/LWEQ domain	2	2
Protein kinase-like (PK-like)	PDZ domain-like	2	2
Nucleotide-diphospho-sugar transferases	Trimeric LpxA-like enzymes	2	2
P-loop containing nucleoside triphosphate hydrolases	PRTase-like	2	1
SRCR-like	SRCR-like	2	2
EGF/Laminin	Ankyrin repeat	2	2
Translation proteins	Initiation factor IF2/eIF5b, domain 3	2	2
L domain-like	Fibronectin type III	2	2
Cysteine proteinases	Ubiquitin-like	2	2
Ubiquitin-like	Concanavalin A-like lectins/glucanases	2	2
Obg GTP-binding protein N-terminal domain	P-loop containing nucleoside triphosphate hydrolases	2	2
Single hybrid motif	CoA-dependent acyltransferases	2	2
Tex N-terminal region-like	RuvA domain 2-like	2	2
DNA/RNA polymerases	DNA/RNA polymerases	2	2
DNA repair protein MutS, domain II	DNA repair protein MutS, domain III	2	1
HAD-like	Cysteine proteinases	2	2
SH2 domain	SOCS box-like	2	1
Ubiquitin-like	BAG domain	2	1
Ankyrin repeat	Hect, E3 ligase catalytic domain	2	2
Pre-PUA domain	PUA domain-like	2	1
P-loop containing nucleoside triphosphate hydrolases	Concanavalin A-like lectins/glucanases	2	2
Calponin-homology domain, CH-domain	E set domains	2	2
Second domain of FERM	I/LWEQ domain	2	2
Bet v1-like	Calpain large subunit, middle domain (domain III)	2	2
P-loop containing nucleoside triphosphate hydrolases	Nucleotidylyl transferase	2	2
PDZ domain-like	Glucocorticoid receptor-like (DNA-binding domain)	2	1
Glucocorticoid receptor-like (DNA-binding domain)	AN1-like Zinc finger	2	2
PH domain-like	I/LWEQ domain	2	2
ADC-like	P-loop containing nucleoside triphosphate hydrolases	2	1
p53-like transcription factors	E set domains	2	2
C-type lectin-like	Complement control module/SCR domain	2	1
Ubiquitin-like	C2 domain (Calcium/lipid-binding domain, CaLB)	2	2
P-loop containing nucleoside triphosphate hydrolases	Tropomyosin	2	2
Bromodomain	HIT/MYND zinc finger-like	2	2
Subtilisin-like	Growth factor receptor domain	2	1
WGR domain-like	ADP-ribosylation	2	2
Immunoglobulin	(Phosphotyrosine protein) phosphatases II	2	2
Nucleic acid-binding proteins	BRCT domain	2	2
FYVE/PHD zinc finger	SMAD/FHA domain	2	2
P-loop containing nucleoside triphosphate hydrolases	BRK domain-like	2	2
SAP domain	RNA-binding domain, RBD	2	1
dsRNA-binding domain-like	Ribosomal protein S5 domain 2-like	2	2
DNA ligase/mRNA capping enzyme, catalytic domain	BRCT domain	2	2
C2 domain (Calcium/lipid-binding domain, CaLB)	WW domain	2	2
CCCH zinc finger	RNA-binding domain, RBD	2	2
"Winged helix" DNA-binding domain	ARM repeat	2	2
FYVE/PHD zinc finger	B-box zinc-binding domain	2	2
Dimerization-anchoring domain of cAMP-dependent PK regulatory subunit	cAMP-binding domain-like	2	2
RNA-binding domain, RBD	Retrovirus zinc finger-like domains	2	2
Ubiquitin-like	ARM repeat	2	2
Galactose-binding domain-like	(Trans)glycosidases	2	2
ATP-dependent DNA ligase DNA-binding domain	BRCT domain	2	2
Tudor/PWWP/MBT	HIV integrase-binding domain	2	1
Bet v1-like	HAD-like	2	2
Transcription factor IIA (TFIIA), alpha-helical domain	Transcription factor IIA (TFIIA), beta-barrel domain	2	1
Restriction endonuclease-like	RuvA domain 2-like	2	2
RNI-like	L domain-like	2	2
F1F0 ATP synthase subunit C	F1F0 ATP synthase subunit C	2	2
RNI-like	UBC-like	1	1
beta-beta-alpha zinc fingers	Voltage-gated potassium channels	1	1
Dcp2 domain-like	Nudix	1	1
(Phosphotyrosine protein) phosphatases II	C2 domain (Calcium/lipid-binding domain, CaLB)	1	1
Acyl-CoA binding protein	Supernatant protein factor (SPF), C-terminal domain	1	1
Ubiquitin-like	Ran binding protein zinc finger-like	1	1
Growth factor receptor domain	(Phosphotyrosine protein) phosphatases II	1	1
Flavoproteins	Riboflavin synthase domain-like	1	1
ArfGap/RecO-like zinc finger	Nucleotide-diphospho-sugar transferases	1	1
RING/U-box	Phospholipase D/nuclease	1	1
Ribosomal protein L25-like	Class II aaRS ABD-related	1	1
Nicotinic receptor ligand binding domain-like	RmlC-like cupins	1	1
TATA-box binding protein-like	Zn-binding ribosomal proteins	1	1
B-box zinc-binding domain	Fibronectin type III	1	1
Lipoxigenase	Lipoxigenase	1	1
Ribosomal protein S5 domain 2-like	DNA mismatch repair protein MutL	1	1
C2 domain (Calcium/lipid-binding domain, CaLB)	P-loop containing nucleoside triphosphate hydrolases	1	1
4'-phosphopantetheinyl transferase	4'-phosphopantetheinyl transferase	1	1
N-terminal domain of adenylylcyclase associated protein, CAP	C-terminal domain of adenylylcyclase associated protein	1	1
Calponin-homology domain, CH-domain	DBL homology domain (DH-domain)	1	1
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain	Nucleotidylyl transferase	1	1
Glutathione synthetase ATP-binding domain-like	Citrate synthase	1	1
FabD/lysophospholipase-like	Probable ACP-binding domain of malonyl-CoA ACP transacylase	1	1
HLH, helix-loop-helix DNA-binding domain	Orange domain-like	1	1
BRCT domain	DNA/RNA polymerases	1	1
beta and beta-prime subunits of DNA dependent RNA-polymerase	beta and beta-prime subunits of DNA dependent RNA-polymerase	1	1
Cysteine proteinases	Proton glutamate symport protein	1	1
YWTD domain	YWTD domain	1	1
Metallo-dependent phosphatases	UDP-Glycosyltransferase/glycogen phosphorylase	1	1
Nucleotidylyl transferase	Class II aaRS ABD-related	1	1
Multidrug resistance efflux transporter EmrE	Galactose-binding domain-like	1	1
YVTN repeat-like/Quinoprotein amine dehydrogenase	Kelch motif	1	1
WGR domain-like	Periplasmic binding protein-like II	1	1
Zn-dependent exopeptidases	Bacterial exopeptidase dimerisation domain	1	1
HAD-like	MIT domain	1	1
"Winged helix" DNA-binding domain	Moesin tail domain	1	1
SH2 domain	RING/U-box	1	1
ENTH/VHS domain	Periplasmic binding protein-like II	1	1
CCCH zinc finger	CHY zinc finger-like	1	1
Bromodomain	HLH, helix-loop-helix DNA-binding domain	1	1
TSP type-3 repeat	TSP type-3 repeat	1	1
WD40 repeat-like	Glycolipid transfer protein, GLTP	1	1
MIT domain	Calpain large subunit, middle domain (domain III)	1	1
alpha/beta-Hydrolases	EF-hand	1	1
Polo-box domain	Polo-box domain	1	1
Chromo domain-like	Ankyrin repeat	1	1
Domain of poly(ADP-ribose) polymerase	Periplasmic binding protein-like II	1	1
Ankyrin repeat	FabD/lysophospholipase-like	1	1
ClpP/crotonase	ClpP/crotonase	1	1
Coiled-coil domain of nucleotide exchange factor GrpE	Head domain of nucleotide exchange factor GrpE	1	1
ADP-ribosylation	Voltage-gated potassium channels	1	1
ARM repeat	SH2 domain	1	1
RNI-like	RNI-like	1	1
BPTI-like	Immunoglobulin	1	1
WD40 repeat-like	3-carboxy-cis,cis-mucoante lactonizing enzyme	1	1
RUN domain-like	Tropomyosin	1	1
RING/U-box	Concanavalin A-like lectins/glucanases	1	1
Ribonuclease PH domain 2-like	EF-hand	1	1
PLP-dependent transferases	Adenine nucleotide alpha hydrolases-like	1	1
Taf5 N-terminal domain-like	WD40 repeat-like	1	1
Ribonuclease H-like	Nucleic acid-binding proteins	1	1
TGS-like	ThrRS/AlaRS common domain	1	1
Ubiquitin-like	Moesin tail domain	1	1
HIT-like	HIT-like	1	1
Prokaryotic type KH domain (KH-domain type II)	Ribosomal protein S3 C-terminal domain	1	1
Acid proteases	Ribonuclease H-like	1	1
TSP-1 type 1 repeat	BPTI-like	1	1
Somatomedin B domain	TSP-1 type 1 repeat	1	1
S15/NS1 RNA-binding domain	Class II aaRS ABD-related	1	1
Hypothetical protein PA1324	Carboxypeptidase regulatory domain-like	1	1
Polo-box domain	EF-hand	1	1
DNase I-like	GTPase activation domain, GAP	1	1
RING/U-box	CSL zinc finger	1	1
ARM repeat	L domain-like	1	1
Nucleoside diphosphate kinase, NDK	Nucleoside diphosphate kinase, NDK	1	1
beta-beta-alpha zinc fingers	FYVE/PHD zinc finger	1	1
Acyl-CoA N-acyltransferases (Nat)	EGF/Laminin	1	1
beta-beta-alpha zinc fingers	S-adenosyl-L-methionine-dependent methyltransferases	1	1
Ribosomal protein S5 domain 2-like	EF-hand	1	1
Glucocorticoid receptor-like (DNA-binding domain)	NAD(P)-binding Rossmann-fold domains	1	1
Protein kinase-like (PK-like)	Cysteine proteinases	1	1
PEP carboxykinase N-terminal domain	PEP carboxykinase-like	1	1
L9 N-domain-like	Phosphoglucomutase, first 3 domains	1	1
Glucocorticoid receptor-like (DNA-binding domain)	Putative DNA-binding domain	1	1
Plus3-like	Restriction endonuclease-like	1	1
FYVE/PHD zinc finger	Acyl-CoA N-acyltransferases (Nat)	1	1
Tropomyosin	FYVE/PHD zinc finger	1	1
GST C-terminal domain-like	eEF-1beta-like	1	1
Metalloproteases ("zincins"), catalytic domain	TSP-1 type 1 repeat	1	1
Cysteine-rich domain	SAM/Pointed domain	1	1
CCHHC domain	CCHHC domain	1	1
PUA domain-like	Ribosomal protein S5 domain 2-like	1	1
Rap30/74 interaction domains	"Winged helix" DNA-binding domain	1	1
4Fe-4S ferredoxins	P-loop containing nucleoside triphosphate hydrolases	1	1
Lipase/lipooxygenase domain (PLAT/LH2 domain)	Lipase/lipooxygenase domain (PLAT/LH2 domain)	1	1
Hedgehog/DD-peptidase	Hedgehog/intein (Hint) domain	1	1
GST C-terminal domain-like	Nucleotidylyl transferase	1	1
RING/U-box	YWTD domain	1	1
SH2 domain	Trm112p-like	1	1
L domain-like	UBA-like	1	1
Protein kinase-like (PK-like)	Kelch motif	1	1
Protein kinase-like (PK-like)	L27 domain	1	1
Ribonuclease PH domain 2-like	TSP-1 type 1 repeat	1	1
L domain-like	EGF/Laminin	1	1
L9 N-domain-like	S-adenosyl-L-methionine-dependent methyltransferases	1	1
DEATH domain	Caspase-like	1	1
Inosine monophosphate dehydrogenase (IMPDH)	Inosine monophosphate dehydrogenase (IMPDH)	1	1
N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1	Translational machinery components	1	1
Ankyrin repeat	Eukaryotic type KH-domain (KH-domain type I)	1	1
FYVE/PHD zinc finger	Concanavalin A-like lectins/glucanases	1	1
Concanavalin A-like lectins/glucanases	ARM repeat	1	1
Radical SAM enzymes	Acyl-CoA N-acyltransferases (Nat)	1	1
Cytochrome b5-like heme/steroid binding domain	Ferredoxin reductase-like, C-terminal NADP-linked domain	1	1
EF-hand	PLC-like phosphodiesterases	1	1
Metallo-dependent phosphatases	Thiamin diphosphate-binding fold (THDP-binding)	1	1
"Winged helix" DNA-binding domain	SAICAR synthase-like	1	1
p53-like transcription factors	DNA-binding protein LAG-1 (CSL)	1	1
Tudor/PWWP/MBT	HIT/MYND zinc finger-like	1	1
Nucleotidylyl transferase	An anticodon-binding domain of class I aminoacyl-tRNA synthetases	1	1
Growth factor receptor domain	Ankyrin repeat	1	1
Ankyrin repeat	Caspase-like	1	1
Cullin homology domain	Moesin tail domain	1	1
Prokaryotic ribosomal protein L17	ValRS/IleRS/LeuRS editing domain	1	1
MIR domain	Concanavalin A-like lectins/glucanases	1	1
lambda repressor-like DNA-binding domains	lambda repressor-like DNA-binding domains	1	1
FAD/NAD(P)-binding domain	Calponin-homology domain, CH-domain	1	1
A middle domain of Talin 1	alpha-catenin/vinculin-like	1	1
TPR-like	"Winged helix" DNA-binding domain	1	1
Ligand-binding domain in the NO signalling and Golgi transport	FYVE/PHD zinc finger	1	1
Dom34/Pelota N-terminal domain-like	L30e-like	1	1
(Phosphotyrosine protein) phosphatases II	DNA ligase/mRNA capping enzyme, catalytic domain	1	1
TATA-box binding protein-like	DNA-glycosylase	1	1
FKBP-like	FKBP-like	1	1
GMP synthetase C-terminal dimerisation domain	GMP synthetase C-terminal dimerisation domain	1	1
PRP4-like	Functional domain of the splicing factor Prp18	1	1
Calponin-homology domain, CH-domain	Calponin-homology domain, CH-domain	1	1
DBL homology domain (DH-domain)	Ras GEF	1	1
WD40 repeat-like	Bromodomain	1	1
RING/U-box	Rnp2-like	1	1
TNF receptor-like	TNF receptor-like	1	1
CCCH zinc finger	RING/U-box	1	1
Polo-box domain	POZ domain	1	1
RING/U-box	Protein kinase-like (PK-like)	1	1
P-loop containing nucleoside triphosphate hydrolases	Growth factor receptor domain	1	1
Cation efflux protein transmembrane domain-like	HAND domain of the nucleosome remodeling ATPase ISWI	1	1
The spindle assembly checkpoint protein mad2	FYVE/PHD zinc finger	1	1
Ubiquitin-like	Cap-Gly domain	1	1
Clathrin heavy-chain terminal domain	ARM repeat	1	1
TGS-like	Class II aaRS ABD-related	1	1
DEATH domain	WD40 repeat-like	1	1
SAM/Pointed domain	PDZ domain-like	1	1
RNA-binding domain, RBD	DBL homology domain (DH-domain)	1	1
Ribonuclease PH domain 2-like	alpha/beta-Hydrolases	1	1
DEK C-terminal domain	SWIB/MDM2 domain	1	1
Chromo domain-like	BRK domain-like	1	1
Spectrin repeat	Plakin repeat	1	1
Protein kinase-like (PK-like)	A DNA-binding domain in eukaryotic transcription factors	1	1
Chaperone J-domain	Phosphoenolpyruvate/pyruvate domain	1	1
Hypothetical protein c14orf129, hspc210	TPR-like	1	1
Protein kinase-like (PK-like)	(Phosphotyrosine protein) phosphatases II	1	1
alpha/beta-Hydrolases	alpha/beta-Hydrolases	1	1
Cysteine proteinases	alpha/beta-Hydrolases	1	1
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	1	1
ARID-like	Chromo domain-like	1	1
(Phosphotyrosine protein) phosphatases II	FYVE/PHD zinc finger	1	1
Prokaryotic ribosomal protein L17	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	1	1
S-adenosyl-L-methionine-dependent methyltransferases	Putative methyltransferase TM0872, insert domain	1	1
Kelch motif	Fibronectin type III	1	1
TPR-like	Metallo-dependent phosphatases	1	1
"Winged helix" DNA-binding domain	HRDC-like	1	1
P-loop containing nucleoside triphosphate hydrolases	HAND domain of the nucleosome remodeling ATPase ISWI	1	1
DBL homology domain (DH-domain)	Immunoglobulin	1	1
Glucocorticoid receptor-like (DNA-binding domain)	VHP, Villin headpiece domain	1	1
NSFL1 (p97 ATPase) cofactor p47, SEP domain	Ubiquitin-like	1	1
FYVE/PHD zinc finger	GroEL apical domain-like	1	1
Calponin-homology domain, CH-domain	RING/U-box	1	1
Histone-fold	Macro domain-like	1	1
SPOC domain-like	SAP domain	1	1
Rof/RNase P subunit-like	EF-hand	1	1
"Winged helix" DNA-binding domain	E2F-DP heterodimerization region	1	1
Ribosomal L11/L12e N-terminal domain	Ribosomal protein L11, C-terminal domain	1	1
vWA-like	BRCA2 tower domain	1	1
CalX-like	CalX-like	1	1
PDZ domain-like	Regulator of G-protein signaling, RGS	1	1
BEACH domain	Putative isomerase YbhE	1	1
L27 domain	SH3-domain	1	1
SMAD/FHA domain	Zinc beta-ribbon	1	1
GTPase activation domain, GAP	Bet v1-like	1	1
SMAD/FHA domain	Conserved domain common to transcription factors TFIIS, elongin A, CRSP70	1	1
Class II aaRS and biotin synthetases	C-terminal domain of ProRS	1	1
FYVE/PHD zinc finger	SAICAR synthase-like	1	1
DNA-binding domain	SET domain	1	1
Frizzled cysteine-rich domain	TIMP-like	1	1
Cysteine proteinases	C2 domain (Calcium/lipid-binding domain, CaLB)	1	1
PUG domain-like	FYVE/PHD zinc finger	1	1
MIR domain	IP3 receptor type 1 binding core, domain 2	1	1
Nucleic acid-binding proteins	"Winged helix" DNA-binding domain	1	1
BRCT domain	DBL homology domain (DH-domain)	1	1
Spectrin repeat	Immunoglobulin	1	1
Purple acid phosphatase, N-terminal domain	Metallo-dependent phosphatases	1	1
eIF2alpha middle domain-like	eIF-2-alpha, C-terminal domain	1	1
RNase III domain-like	dsRNA-binding domain-like	1	1
Plexin repeat	GTPase activation domain, GAP	1	1
Chaperone J-domain	CSL zinc finger	1	1
Acyl-CoA N-acyltransferases (Nat)	Bromodomain	1	1
SNARE fusion complex	RING/U-box	1	1
ISP transmembrane anchor	ISP domain	1	1
SAM/Pointed domain	"Winged helix" DNA-binding domain	1	1
GST C-terminal domain-like	Class II aaRS ABD-related	1	1
Alpha subunit of glutamate synthase, C-terminal domain	alpha-helical ferredoxin	1	1
RNA-binding domain, RBD	dsRNA-binding domain-like	1	1
L domain-like	NTF2-like	1	1
vWA-like	SAP domain	1	1
Succinyl-CoA synthetase domains	Citrate synthase	1	1
P-loop containing nucleoside triphosphate hydrolases	WW domain	1	1
MAST3 pre-PK domain-like	PDZ domain-like	1	1
Cullin homology domain	Second domain of FERM	1	1
FYVE/PHD zinc finger	SAM/Pointed domain	1	1
Ankyrin repeat	SOCS box-like	1	1
Activator of Hsp90 ATPase, Aha1	Bet v1-like	1	1
BAR/IMD domain-like	Ankyrin repeat	1	1
beta-beta-alpha zinc fingers	Protein kinase-like (PK-like)	1	1
SMAD/FHA domain	PH domain-like	1	1
Nucleotidylyl transferase	C-terminal domain of ProRS	1	1
UBA-like	KA1-like	1	1
Surp module (SWAP domain)	ENTH/VHS domain	1	1
P-loop containing nucleoside triphosphate hydrolases	SMAD/FHA domain	1	1
dsRNA-binding domain-like	P-loop containing nucleoside triphosphate hydrolases	1	1
Adenine nucleotide alpha hydrolases-like	Putative DNA-binding domain	1	1
BAR/IMD domain-like	Protein kinase-like (PK-like)	1	1
WW domain	EF-hand	1	1
Plexin repeat	vWA-like	1	1
Ribonuclease H-like	"Winged helix" DNA-binding domain	1	1
SH2 domain	Isochorismatase-like hydrolases	1	1
Retrovirus zinc finger-like domains	RING/U-box	1	1
Ribonuclease H-like	SMAD/FHA domain	1	1
CCCH zinc finger	Rhodanese/Cell cycle control phosphatase	1	1
SAP domain	P-loop containing nucleoside triphosphate hydrolases	1	1
Class II aaRS and biotin synthetases	Anticodon-binding domain of PheRS	1	1
Tetraspanin	EF-hand	1	1
Nucleotide-diphospho-sugar transferases	ARM repeat	1	1
Acetyl-CoA synthetase-like	Acetyl-CoA synthetase-like	1	1
N-terminal domain of cbl (N-cbl)	RING/U-box	1	1
Domain of poly(ADP-ribose) polymerase	ENTH/VHS domain	1	1
TRAF domain-like	POZ domain	1	1
Acyl-CoA binding protein	Ankyrin repeat	1	1
Spectrin repeat	RING/U-box	1	1
SAND domain-like	Ran binding protein zinc finger-like	1	1
Ribosomal protein L25-like	Class II aaRS and biotin synthetases	1	1
TPR-like	RNA-binding domain, RBD	1	1
EF-hand	C-terminal domain of PLC-beta	1	1
Glutathione synthetase ATP-binding domain-like	Phosphoglycerate mutase-like	1	1
Polo-box domain	WD40 repeat-like	1	1
HMA, heavy metal-associated domain	Metal cation-transporting ATPase, ATP-binding domain N	1	1
Mib/herc2 domain-like	Ankyrin repeat	1	1
DBL homology domain (DH-domain)	SH2 domain	1	1
TATA-box binding protein-like	P-loop containing nucleoside triphosphate hydrolases	1	1
Cation efflux protein transmembrane domain-like	Homeodomain-like	1	1
P-loop containing nucleoside triphosphate hydrolases	vWA-like	1	1
Methionyl-tRNA synthetase (MetRS), Zn-domain	Nucleotidylyl transferase	1	1
Glucocorticoid receptor-like (DNA-binding domain)	Domain of poly(ADP-ribose) polymerase	1	1
Pseudouridine synthase	PUA domain-like	1	1
PH domain-like	NHL repeat	1	1
Cysteine-rich domain	PH domain-like	1	1
Notch domain	Notch domain	1	1
SH3-domain	C2 domain (Calcium/lipid-binding domain, CaLB)	1	1
Ubiquitin-like	"Winged helix" DNA-binding domain	1	1
BAR/IMD domain-like	ArfGap/RecO-like zinc finger	1	1
Formin homology 2 domain (FH2 domain)	Vasodilator-stimulated phosphoprotein, VASP, tetramerisation domain	1	1
CCCH zinc finger	Retrovirus zinc finger-like domains	1	1
2Fe-2S ferredoxin-like	Formate dehydrogenase/DMSO reductase, domains 1-3	1	1
Periplasmic binding protein-like I	Periplasmic binding protein-like I	1	1
RNI-like	WD40 repeat-like	1	1
POZ domain	Galactose-binding domain-like	1	1
Protein kinase-like (PK-like)	EF-hand	1	1
Thioredoxin-like	Cysteine proteinases	1	1
Nucleotide-binding domain	4Fe-4S ferredoxins	1	1
EF-hand	Glutathione synthetase ATP-binding domain-like	1	1
HR1 repeat	Protein kinase-like (PK-like)	1	1
vWA-like	EGF/Laminin	1	1
TROVE domain-like	P-loop containing nucleoside triphosphate hydrolases	1	1
Acyl-CoA N-acyltransferases (Nat)	Acyl-CoA N-acyltransferases (Nat)	1	1
RING/U-box	Chaperone J-domain	1	1
PH domain-like	Putative isomerase YbhE	1	1
Fibronectin type III	Multiheme cytochromes	1	1
C2 domain (Calcium/lipid-binding domain, CaLB)	Chaperone J-domain	1	1
Terpenoid synthases	RuvA domain 2-like	1	1
Calponin-homology domain, CH-domain	SH3-domain	1	1
Ubiquitin-like	FYVE/PHD zinc finger	1	1
Rof/RNase P subunit-like	Calpain large subunit, middle domain (domain III)	1	1
RuvA domain 2-like	SH2 domain	1	1
Protein kinase-like (PK-like)	NAD(P)-binding Rossmann-fold domains	1	1
Aminopeptidase/glucanase lid domain	Zn-dependent exopeptidases	1	1
Metallo-dependent phosphatases	EF-hand	1	1
Cysteine proteinases	Galactose-binding domain-like	1	1
CAD & PB1 domains	Protein kinase-like (PK-like)	1	1
Ribosomal protein S5 domain 2-like	Type II DNA topoisomerase	1	1
GFP-like	EGF/Laminin	1	1
GFP-like	Growth factor receptor domain	1	1
BRCT domain	Lesion bypass DNA polymerase (Y-family), little finger domain	1	1
Nudix	DNase I-like	1	1
LDL receptor-like module	Mannose 6-phosphate receptor domain	1	1
Lipovitellin-phosvitin complex; beta-sheet shell regions	Lipovitellin-phosvitin complex, superhelical domain	1	1
beta-beta-alpha zinc fingers	Ankyrin repeat	1	1
PH domain-like	HMG-box	1	1
Glucocorticoid receptor-like (DNA-binding domain)	SH3-domain	1	1
Metalloproteases ("zincins"), catalytic domain	Metalloproteases ("zincins"), catalytic domain	1	1
alpha/beta-Hydrolases	Nop domain	1	1
TATA-box binding protein-like	N-terminal domain of alpha and beta subunits of F1 ATP synthase	1	1
vWA-like	C-terminal domain of Ku80	1	1
EGF/Laminin	Methyl-accepting chemotaxis protein (MCP) signaling domain	1	1
TSP-1 type 1 repeat	Nop domain	1	1
FAD-binding/transporter-associated domain-like	FAD-linked oxidases, C-terminal domain	1	1
Immunoglobulin	DPP6 N-terminal domain-like	1	1
Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain	Pyrimidine nucleoside phosphorylase C-terminal domain	1	1
Glutamine synthetase, N-terminal domain	Glutamine synthetase/guanido kinase	1	1
Smc hinge domain	Tropomyosin	1	1
P-loop containing nucleoside triphosphate hydrolases	Hypothetical protein YjiA, C-terminal domain	1	1
SH3-domain	SAM/Pointed domain	1	1
Fibronectin type III	Concanavalin A-like lectins/glucanases	1	1
PDZ domain-like	BAR/IMD domain-like	1	1
Chromo domain-like	EGF/Laminin	1	1
Molybdenum cofactor biosynthesis proteins	Adenine nucleotide alpha hydrolases-like	1	1
F-box domain	Sec7 domain	1	1
Ypt/Rab-GAP domain of gyp1p	WD40 repeat-like	1	1
Metallo-dependent phosphatases	SAICAR synthase-like	1	1
ENTH/VHS domain	Periplasmic binding protein-like I	1	1
C2 domain (Calcium/lipid-binding domain, CaLB)	vWA-like	1	1
EF-hand	TSP-1 type 1 repeat	1	1
TPR-like	Protein prenylyltransferase	1	1
GST C-terminal domain-like	Ribosomal protein L25-like	1	1
B-box zinc-binding domain	Concanavalin A-like lectins/glucanases	1	1
RING/U-box	MFS general substrate transporter	1	1
UBA-like	XPC-binding domain	1	1
Eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment	DNA breaking-rejoining enzymes	1	1
Nqo1 FMN-binding domain-like	Nqo1C-terminal domain-like	1	1
IP3 receptor type 1 binding core, domain 2	EF-hand	1	1
Glucocorticoid receptor-like (DNA-binding domain)	WGR domain-like	1	1
BRCA2 helical domain	Nucleic acid-binding proteins	1	1
PYP-like sensor domain (PAS domain)	PYP-like sensor domain (PAS domain)	1	1
Plakin repeat	Plakin repeat	1	1
B-box zinc-binding domain	TRAF domain-like	1	1
Plexin repeat	E set domains	1	1
Ribosomal protein S5 domain 2-like	Nop domain	1	1
Neurotransmitter-gated ion-channel transmembrane pore	RmlC-like cupins	1	1
Nucleotidylyl transferase	Nucleic acid-binding proteins	1	1
Clavaminate synthase-like	Tudor/PWWP/MBT	1	1
Second domain of FERM	alpha-catenin/vinculin-like	1	1
ARM repeat	FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP)	1	1
EF-hand	YVTN repeat-like/Quinoprotein amine dehydrogenase	1	1
alpha-helical ferredoxin	4Fe-4S ferredoxins	1	1
Spectrin repeat	GAS2 domain-like	1	1
GTPase activation domain, GAP	GTPase activation domain, GAP	1	1
EF-hand	DBL homology domain (DH-domain)	1	1
RuvA domain 2-like	Nucleic acid-binding proteins	1	1
ENTH/VHS domain	FYVE/PHD zinc finger	1	1
Ankyrin repeat	RNI-like	1	1
ADP-ribosylation	Periplasmic binding protein-like I	1	1
HMA, heavy metal-associated domain	Calcium ATPase, transduction domain A	1	1
Composite domain of metallo-dependent hydrolases	Composite domain of metallo-dependent hydrolases	1	1
POZ domain	Alpha-L RNA-binding motif	1	1
Metallo-hydrolase/oxidoreductase	Metallo-hydrolase/oxidoreductase	1	1
RNA-binding domain, RBD	PH domain-like	1	1
Nuclear receptor ligand-binding domain	Nuclear receptor ligand-binding domain	1	1
E set domains	GTPase activation domain, GAP	1	1
TPR-like	PIN domain-like	1	1
BRCT domain	post-AAA+ oligomerization domain-like	1	1
P-loop containing nucleoside triphosphate hydrolases	Class I glutamine amidotransferase-like	1	1
SAM/Pointed domain	RING/U-box	1	1
Epsilon subunit of F1F0-ATP synthase N-terminal domain	Epsilon subunit of F1F0-ATP synthase C-terminal domain	1	1
SWIB/MDM2 domain	eIF1-like	1	1
DNA/RNA polymerases	Immunoglobulin	1	1
Bromodomain	HMG-box	1	1
MIR domain	EF-hand	1	1
N-terminal nucleophile aminohydrolases (Ntn hydrolases)	Nucleotide-binding domain	1	1
SH2 domain	WD40 repeat-like	1	1
PRP4-like	WD40 repeat-like	1	1
Eukaryotic type KH-domain (KH-domain type I)	Retrovirus zinc finger-like domains	1	1
Seven-hairpin glycosidases	PA domain	1	1
Plexin repeat	TSP-1 type 1 repeat	1	1
Multidrug resistance efflux transporter EmrE	(Trans)glycosidases	1	1
HAND domain of the nucleosome remodeling ATPase ISWI	Homeodomain-like	1	1
Cullin homology domain	Protein kinase-like (PK-like)	1	1
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain	Pyrimidine nucleoside phosphorylase C-terminal domain	1	1
BSD domain-like	BSD domain-like	1	1
WD40 repeat-like	Nucleoporin domain	1	1
Ubiquitin-like	NAD kinase/diacylglycerol kinase-like	1	1
FLJ32549 domain-like	FLJ32549 C-terminal domain-like	1	1
E set domains	(Trans)glycosidases	1	1
vWA-like	WD40 repeat-like	1	1
Fibronectin type III	Cyclin-like	1	1
EF-hand	SH2 domain	1	1
2Fe-2S ferredoxin-like	4Fe-4S ferredoxins	1	1
Voltage-gated potassium channels	Small-conductance potassium channel	1	1
Voltage-gated potassium channels	NAD(P)-binding Rossmann-fold domains	1	1
PH domain-like	Wiscott-Aldrich syndrome protein, WASP, C-terminal domain	1	1
GAT-like domain	Clathrin adaptor appendage domain	1	1
FAD-linked reductases, C-terminal domain	Ankyrin repeat	1	1
mRNA decapping enzyme DcpS N-terminal domain	HIT-like	1	1
Ankyrin repeat	ADP-ribosylation	1	1
Cation efflux protein cytoplasmic domain-like	HAND domain of the nucleosome remodeling ATPase ISWI	1	1
Sema domain	TSP-1 type 1 repeat	1	1
PH domain-like	(Phosphotyrosine protein) phosphatases II	1	1
Fibronectin type III	Ankyrin repeat	1	1
Tudor/PWWP/MBT	BRCT domain	1	1
Phosphofructokinase	Phosphofructokinase	1	1
Spermadhesin, CUB domain	LDL receptor-like module	1	1
Adenine nucleotide alpha hydrolases-like	GMP synthetase C-terminal dimerisation domain	1	1
C2 domain (Calcium/lipid-binding domain, CaLB)	dsRNA-binding domain-like	1	1
Flavoproteins	Ferredoxin reductase-like, C-terminal NADP-linked domain	1	1
DBL homology domain (DH-domain)	C2 domain (Calcium/lipid-binding domain, CaLB)	1	1
Band 7/SPFH domain	Ribonuclease H-like	1	1
Zn-dependent exopeptidases	ARM repeat	1	1
GST C-terminal domain-like	C-terminal domain of ProRS	1	1
Prokaryotic ribosomal protein L17	Nucleotidylyl transferase	1	1
FAD/NAD(P)-binding domain	EF-hand	1	1
Growth factor receptor domain	Notch domain	1	1
HAD-like	Ankyrin repeat	1	1
"Winged helix" DNA-binding domain	Transducin (heterotrimeric G protein), gamma chain	1	1
YWTD domain	LDL receptor-like module	1	1
EGF/Laminin	TIMP-like	1	1
Glucocorticoid receptor-like (DNA-binding domain)	RNA-binding domain, RBD	1	1
Immunoglobulin	Tricorn protease domain 2	1	1
PLC-like phosphodiesterases	C-terminal domain of PLC-beta	1	1
C2 domain (Calcium/lipid-binding domain, CaLB)	C-terminal domain of PLC-beta	1	1
DNA-binding protein LAG-1 (CSL)	E set domains	1	1
"Winged helix" DNA-binding domain	Second domain of FERM	1	1
TRAF domain-like	TRAF domain-like	1	1
Ankyrin repeat	Nucleotide-diphospho-sugar transferases	1	1
Protease propeptides/inhibitors	Subtilisin-like	1	1
L domain-like	DNase I-like	1	1
SH3-domain	RUN domain-like	1	1
FAD-dependent thiol oxidase	Sm-like ribonucleoproteins	1	1
Alpha subunit of glutamate synthase, C-terminal domain	Nucleotide-binding domain	1	1
BRK domain-like	Bromodomain	1	1
Thioredoxin-like	eEF1-gamma domain	1	1
P-loop containing nucleoside triphosphate hydrolases	LigT-like	1	1
S-adenosyl-L-methionine-dependent methyltransferases	WD40 repeat-like	1	1
BAR/IMD domain-like	SH2 domain	1	1
Thiamin diphosphate-binding fold (THDP-binding)	TK C-terminal domain-like	1	1
Immunoglobulin	alpha/beta-Hydrolases	1	1
PH domain-like	Bet v1-like	1	1
PheT/TilS domain	Class II aaRS and biotin synthetases	1	1
HMA, heavy metal-associated domain	Calcium ATPase, transmembrane domain M	1	1
P-loop containing nucleoside triphosphate hydrolases	RNI-like	1	1
P-loop containing nucleoside triphosphate hydrolases	Prokaryotic type KH domain (KH-domain type II)	1	1
Sec1/munc18-like (SM) proteins	Sec1/munc18-like (SM) proteins	1	1
Protease propeptides/inhibitors	Galactose-binding domain-like	1	1
Ankyrin repeat	L domain-like	1	1
WW domain	FKBP-like	1	1
Rudiment single hybrid motif	Single hybrid motif	1	1
SAM/Pointed domain	ADP-ribosylation	1	1
L9 N-domain-like	Phosphoglucomutase, C-terminal domain	1	1
Nicotinate/Quinolinate PRTase N-terminal domain-like	Nicotinate/Quinolinate PRTase C-terminal domain-like	1	1
TRAF domain-like	Cysteine proteinases	1	1
P-loop containing nucleoside triphosphate hydrolases	Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain	1	1
SMAD/FHA domain	Elongation factor TFIIS domain 2	1	1
Nucleotide-binding domain	Nucleotide-binding domain	1	1
vWA-like	Growth factor receptor domain	1	1
WD40 repeat-like	C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase	1	1
Thioredoxin-like	FAD/NAD(P)-binding domain	1	1
S-adenosyl-L-methionine-dependent methyltransferases	Protein kinase-like (PK-like)	1	1
beta-lactamase/transpeptidase-like	Thioredoxin-like	1	1
SET domain	beta-beta-alpha zinc fingers	1	1
Oligoxyloglucan reducing end-specific cellobiohydrolase	Oligoxyloglucan reducing end-specific cellobiohydrolase	1	1
GST C-terminal domain-like	eEF1-gamma domain	1	1
MIR domain	MIR domain	1	1
PX domain	Protein kinase-like (PK-like)	1	1
Spectrin repeat	SH3-domain	1	1
SH2 domain	Ankyrin repeat	1	1
PUG domain-like	Protein kinase-like (PK-like)	1	1
Adenine nucleotide alpha hydrolases-like	Cation efflux protein transmembrane domain-like	1	1
Translational machinery components	alpha/beta-Hydrolases	1	1
Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain	Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain	1	1
CCCH zinc finger	ISP domain	1	1
P-loop containing nucleoside triphosphate hydrolases	ArfGap/RecO-like zinc finger	1	1
PRTase-like	Ribulose-phoshate binding barrel	1	1
beta-beta-alpha zinc fingers	Growth factor receptor domain	1	1
Sema domain	GTPase activation domain, GAP	1	1
WW domain	RING/U-box	1	1
FAD/NAD(P)-binding domain	Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain	1	1
SMAD/FHA domain	Protein kinase-like (PK-like)	1	1
ThrRS/AlaRS common domain	Class II aaRS ABD-related	1	1
CalX-like	C-type lectin-like	1	1
FMN-linked oxidoreductases	dsRNA-binding domain-like	1	1
L domain-like	Heme-dependent peroxidases	1	1
Translational machinery components	Coiled-coil domain of nucleotide exchange factor GrpE	1	1
Amine oxidase N-terminal region	Amine oxidase catalytic domain	1	1
Ankyrin repeat	SAM/Pointed domain	1	1
DNA repair protein MutS, domain III	DNA repair protein MutS, domain III	1	1
S15/NS1 RNA-binding domain	Class II aaRS and biotin synthetases	1	1
Ankyrin repeat	Immunoglobulin	1	1
PH domain-like	Nucleotide-diphospho-sugar transferases	1	1
Domain of the SRP/SRP receptor G-proteins	Signal peptide-binding domain	1	1
Acetyl-CoA synthetase-like	ACP-like	1	1
TATA-box binding protein-like	C-terminal domain of alpha and beta subunits of F1 ATP synthase	1	1
TPR-like	RNI-like	1	1
UBC-like	Protein kinase-like (PK-like)	1	1
4Fe-4S ferredoxins	Formate dehydrogenase/DMSO reductase, domains 1-3	1	1
Regulator of G-protein signaling, RGS	Cysteine-rich domain	1	1
Transducin (heterotrimeric G protein), gamma chain	Regulator of G-protein signaling, RGS	1	1
Kringle-like	Kringle-like	1	1
PUG domain-like	Cysteine proteinases	1	1
UDP-glucose/GDP-mannose dehydrogenase C-terminal domain	UDP-glucose/GDP-mannose dehydrogenase C-terminal domain	1	1
Metallo-dependent phosphatases	"Winged helix" DNA-binding domain	1	1
C-terminal autoproteolytic domain of nucleoporin nup98	Creatinase/prolidase N-terminal domain	1	1
Translation proteins	Translation proteins	1	1
Protein kinase-like (PK-like)	Chaperone J-domain	1	1
Protease propeptides/inhibitors	Zn-dependent exopeptidases	1	1
Retrovirus zinc finger-like domains	ISP transmembrane anchor	1	1
(Phosphotyrosine protein) phosphatases II	Cyclin-like	1	1
Glutathione synthetase ATP-binding domain-like	Rudiment single hybrid motif	1	1
Glutathione synthetase ATP-binding domain-like	Single hybrid motif	1	1
RNA-binding domain, RBD	Regulator of G-protein signaling, RGS	1	1
HMA, heavy metal-associated domain	HMA, heavy metal-associated domain	1	1
Complement control module/SCR domain	Complement control module/SCR domain	1	1
EF-hand	Nop domain	1	1
PUG domain-like	Ubiquitin-like	1	1
Class I glutamine amidotransferase-like	GMP synthetase C-terminal dimerisation domain	1	1
Plakin repeat	EF-hand	1	1
"Winged helix" DNA-binding domain	occludin/ELL-like	1	1
t-snare proteins	SNARE fusion complex	1	1
Chromo domain-like	ARM repeat	1	1
RING/U-box	Fibronectin type III	1	1
RNA-binding domain, RBD	Tryptophan synthase beta subunit-like PLP-dependent enzymes	1	1
SNARE-like	Domain of the SRP/SRP receptor G-proteins	1	1
vWA-like	Immunoglobulin	1	1
Cullin repeat-like	Protein kinase-like (PK-like)	1	1
NAD(P)-binding Rossmann-fold domains	LDL receptor-like module	1	1
"Winged helix" DNA-binding domain	GroEL apical domain-like	1	1
UBA-like	Elongation factor Ts (EF-Ts), dimerisation domain	1	1
Calponin-homology domain, CH-domain	P-loop containing nucleoside triphosphate hydrolases	1	1
WD40 repeat-like	Cyclophilin-like	1	1
SNF-like	P-loop containing nucleoside triphosphate hydrolases	1	1
TPR-like	Ankyrin repeat	1	1
MurD-like peptide ligases, catalytic domain	MurD-like peptide ligases, peptide-binding domain	1	1
Ypt/Rab-GAP domain of gyp1p	SH3-domain	1	1
Band 7/SPFH domain	SCP-like	1	1
Voltage-gated potassium channels	EF-hand	1	1
EF-hand	Translation proteins SH3-like domain	1	1
N-terminal nucleophile aminohydrolases (Ntn hydrolases)	alpha-helical ferredoxin	1	1
L domain-like	RING/U-box	1	1
"Winged helix" DNA-binding domain	Regulator of G-protein signaling, RGS	1	1
Chaperone J-domain	E set domains	1	1
P-loop containing nucleoside triphosphate hydrolases	EGF/Laminin	1	1
Tex N-terminal region-like	SH2 domain	1	1
Aconitase iron-sulfur domain	LeuD/IlvD-like	1	1
N-terminal domain of cbl (N-cbl)	EF-hand	1	1
Metalloproteases ("zincins"), catalytic domain	Spermadhesin, CUB domain	1	1
WGR domain-like	ENTH/VHS domain	1	1
P-loop containing nucleoside triphosphate hydrolases	Phosphoglycerate mutase-like	1	1
Fibronectin type III	SH3-domain	1	1
Indigoidine synthase A-like	Ribokinase-like	1	1
RING/U-box	BRCT domain	1	1
P-loop containing nucleoside triphosphate hydrolases	Metallo-dependent phosphatases	1	1
Acyl-CoA N-acyltransferases (Nat)	ARM repeat	1	1
vWA-like	Cysteine-rich domain	1	1
Hedgehog/DD-peptidase	Hedgehog/DD-peptidase	1	1
Nucleic acid-binding proteins	eIF2alpha middle domain-like	1	1
Zinc beta-ribbon	Zinc beta-ribbon	1	1
PH domain-like	C-terminal domain of PLC-beta	1	1
Formate/glycerate dehydrogenase catalytic domain-like	DHS-like NAD/FAD-binding domain	1	1
PLP-dependent transferases	ARM repeat	1	1
NAD(P)-binding Rossmann-fold domains	Immunoglobulin	1	1
CCHHC domain	Acyl-CoA N-acyltransferases (Nat)	1	1
NAD kinase/diacylglycerol kinase-like	Ankyrin repeat	1	1
RCC1/BLIP-II	RCC1/BLIP-II	1	1
Calponin-homology domain, CH-domain	EB1 dimerisation domain-like	1	1
Cation efflux protein cytoplasmic domain-like	P-loop containing nucleoside triphosphate hydrolases	1	1
Ribosomal protein S5 domain 2-like	TSP-1 type 1 repeat	1	1
Ribonuclease H-like	Phosphoglucomutase, first 3 domains	1	1
Glucocorticoid receptor-like (DNA-binding domain)	ADP-ribosylation	1	1
Protein kinase-like (PK-like)	UBA-like	1	1
SPOC domain-like	C-terminal domain of Ku80	1	1
Cytochrome b5-like heme/steroid binding domain	Riboflavin synthase domain-like	1	1
PDZ domain-like	C2 domain (Calcium/lipid-binding domain, CaLB)	1	1
BPTI-like	Tricorn protease domain 2	1	1
GTPase activation domain, GAP	SH3-domain	1	1
SET domain	RuBisCo LSMT C-terminal, substrate-binding domain	1	1
Rad51 N-terminal domain-like	P-loop containing nucleoside triphosphate hydrolases	1	1
Spermadhesin, CUB domain	EGF/Laminin	1	1
PGBD-like	Hemopexin-like domain	1	1
"Winged helix" DNA-binding domain	RNA-binding domain, RBD	1	1
Putative methyltransferase TM0872, insert domain	WD40 repeat-like	1	1
Thiamin pyrophosphokinase, catalytic domain	Thiamin pyrophosphokinase, substrate-binding domain	1	1
Staphylococcal nuclease	Staphylococcal nuclease	1	1
C-terminal autoproteolytic domain of nucleoporin nup98	Creatinase/aminopeptidase	1	1
L domain-like	WD40 repeat-like	1	1
Protein kinase-like (PK-like)	Class II aaRS and biotin synthetases	1	1
Rof/RNase P subunit-like	Cysteine proteinases	1	1
2Fe-2S ferredoxin-like	alpha-helical ferredoxin	1	1
Supernatant protein factor (SPF), C-terminal domain	NAD(P)-binding Rossmann-fold domains	1	1
Ankyrin repeat	SH3-domain	1	1
RNA-binding domain, RBD	S-adenosyl-L-methionine-dependent methyltransferases	1	1
PreATP-grasp domain	Single hybrid motif	1	1
BRCT domain	P-loop containing nucleoside triphosphate hydrolases	1	1
Mannose 6-phosphate receptor domain	Mannose 6-phosphate receptor domain	1	1
t-snare proteins	Nucleotidylyl transferase	1	1
WD40 repeat-like	Kelch motif	1	1
Multidrug resistance efflux transporter EmrE	beta-Galactosidase/glucuronidase domain	1	1
RUN domain-like	RUN domain-like	1	1
UBC-like	UBA-like	1	1
RNA-binding domain, RBD	SET domain	1	1
EF-hand	GAS2 domain-like	1	1
NAD(P)-binding Rossmann-fold domains	Clavaminate synthase-like	1	1
Mannose 6-phosphate receptor domain	Oxysterol-binding protein-like	1	1
Mitochondrial carrier	Glutathione synthetase ATP-binding domain-like	1	1
ARM repeat	FYVE/PHD zinc finger	1	1
ARM repeat	SH3-domain	1	1
CCCH zinc finger	Chaperone J-domain	1	1
Nucleic acid-binding proteins	BRCA2 tower domain	1	1
N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1	L30e-like	1	1
Lissencephaly-1 protein (Lis-1, PAF-AH alpha) N-terminal domain	WD40 repeat-like	1	1
DNA breaking-rejoining enzymes	Eukaryotic DNA topoisomerase I, dispensable insert domain	1	1
NAD(P)-binding Rossmann-fold domains	Citrate synthase	1	1
Starch-binding domain-like	PLC-like phosphodiesterases	1	1
RUN domain-like	PH domain-like	1	1
Translational machinery components	Head domain of nucleotide exchange factor GrpE	1	1
FYVE/PHD zinc finger	Rabenosyn-5 Rab-binding domain-like	1	1
beta-beta-alpha zinc fingers	cAMP-binding domain-like	1	1
vWA-like	Nucleic acid-binding proteins	1	1
Nqo1 FMN-binding domain-like	Nqo1 middle domain-like	1	1
FYVE/PHD zinc finger	UDP-Glycosyltransferase/glycogen phosphorylase	1	1
Ribosomal protein L7/12, oligomerisation (N-terminal) domain	ClpS-like	1	1
N-terminal nucleophile aminohydrolases (Ntn hydrolases)	SIS domain	1	1
MAST3 pre-PK domain-like	Protein kinase-like (PK-like)	1	1
Methionyl-tRNA synthetase (MetRS), Zn-domain	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	1	1
Ribosomal protein L1	WD40 repeat-like	1	1
Immunoglobulin	Calponin-homology domain, CH-domain	1	1
Terpenoid synthases	Restriction endonuclease-like	1	1
IP3 receptor type 1 binding core, domain 2	Concanavalin A-like lectins/glucanases	1	1
WD40 repeat-like	Peptidase/esterase 'gauge' domain	1	1
FYVE/PHD zinc finger	PDZ domain-like	1	1
Protein kinase-like (PK-like)	Zn-dependent exopeptidases	1	1
Nucleic acid-binding proteins	TPR-like	1	1
Quinoprotein alcohol dehydrogenase-like	WD40 repeat-like	1	1
GroEL apical domain-like	UDP-Glycosyltransferase/glycogen phosphorylase	1	1
RUN domain-like	Lipase/lipooxygenase domain (PLAT/LH2 domain)	1	1
SAM/Pointed domain	SH2 domain	1	1
TSP-1 type 1 repeat	GFP-like	1	1
P-loop containing nucleoside triphosphate hydrolases	eIF4e-like	1	1
Cullin repeat-like	ARM repeat	1	1
Ubiquitin-like	Zn-binding ribosomal proteins	1	1
Hypothetical protein SAV1430	Fe-S cluster assembly (FSCA) domain-like	1	1
CAD & PB1 domains	PDZ domain-like	1	1
Leucine zipper domain	Leucine zipper domain	1	1
P-loop containing nucleoside triphosphate hydrolases	Second domain of FERM	1	1
Nucleotidylyl transferase	Class II aaRS and biotin synthetases	1	1
Eukaryotic RPB5 N-terminal domain	RPB5-like RNA polymerase subunit	1	1
Class I glutamine amidotransferase-like	Class I glutamine amidotransferase-like	1	1
Fe,Mn superoxide dismutase (SOD), N-terminal domain	Fe,Mn superoxide dismutase (SOD), C-terminal domain	1	1
SAP domain	Concanavalin A-like lectins/glucanases	1	1
RING/U-box	Regulator of G-protein signaling, RGS	1	1
EF-hand	Rhomboid-like	1	1
SAM/Pointed domain	PH domain-like	1	1
Sm-like ribonucleoproteins	Ferredoxin reductase-like, C-terminal NADP-linked domain	1	1
Galactose-binding domain-like	beta-Galactosidase/glucuronidase domain	1	1
Concanavalin A-like lectins/glucanases	EF-hand	1	1
alpha/beta-Hydrolases	TSP-1 type 1 repeat	1	1
PH domain-like	Formin homology 2 domain (FH2 domain)	1	1
Elongation factor TFIIS domain 2	Zinc beta-ribbon	1	1
Glucocorticoid receptor-like (DNA-binding domain)	VPS9 domain	1	1
WW domain	BAG domain	1	1
PUG domain-like	Galactose-binding domain-like	1	1
TB module/8-cys domain	Growth factor receptor domain	1	1
RNA-binding domain, RBD	DPP6 N-terminal domain-like	1	1
FAD-linked reductases, C-terminal domain	EF-hand	1	1
alpha-ketoacid dehydrogenase kinase, N-terminal domain	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase	1	1
Domain of poly(ADP-ribose) polymerase	Periplasmic binding protein-like I	1	1
RNA-binding domain, RBD	PX domain	1	1
Saposin	Saposin	1	1
EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain	EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain	1	1
Putative DNA-binding domain	Putative DNA-binding domain	1	1
N-terminal nucleophile aminohydrolases (Ntn hydrolases)	FMN-linked oxidoreductases	1	1
Actin-crosslinking proteins	Actin-crosslinking proteins	1	1
Translation initiation factor 2 beta, aIF2beta, N-terminal domain	ARM repeat	1	1
TPR-like	Band 7/SPFH domain	1	1
I/LWEQ domain	alpha-catenin/vinculin-like	1	1
BEACH domain	NHL repeat	1	1
ARM repeat	Hect, E3 ligase catalytic domain	1	1
Ribonuclease H-like	SH2 domain	1	1
Ribosomal protein L6	Ribosomal protein L6	1	1
Spectrin repeat	WW domain	1	1
ADP-ribosylation	ENTH/VHS domain	1	1
P-loop containing nucleoside triphosphate hydrolases	beta-beta-alpha zinc fingers	1	1
TGS-like	Class II aaRS and biotin synthetases	1	1
Staphylococcal nuclease	Tudor/PWWP/MBT	1	1
Protein kinase-like (PK-like)	YVTN repeat-like/Quinoprotein amine dehydrogenase	1	1
Domain of poly(ADP-ribose) polymerase	Voltage-gated potassium channels	1	1
Conserved domain common to transcription factors TFIIS, elongin A, CRSP70	CCCH zinc finger	1	1
EGF/Laminin	YWTD domain	1	1
Putative isomerase YbhE	WD40 repeat-like	1	1
S-adenosylmethionine synthetase	S-adenosylmethionine synthetase	1	1
Ribonuclease H-like	Phosphoglucomutase, C-terminal domain	1	1
Kix domain of CBP (creb binding protein)	FYVE/PHD zinc finger	1	1
"Winged helix" DNA-binding domain	PRC-barrel domain	1	1
Putative DNA-binding domain	PheT/TilS domain	1	1
S-adenosyl-L-methionine-dependent methyltransferases	ITPase-like	1	1
CCCH zinc finger	CSL zinc finger	1	1
Acetyl-CoA synthetase-like	Quinoprotein alcohol dehydrogenase-like	1	1
L27 domain	L27 domain	1	1
Annexin	Annexin	1	1
Polo-box domain	Kelch motif	1	1
RING/U-box	UBA-like	1	1
Peptidase/esterase 'gauge' domain	alpha/beta-Hydrolases	1	1
Suppressor of Fused, N-terminal domain	Suppressor of Fused, N-terminal domain	1	1
Thioredoxin-like	FAD/NAD-linked reductases, dimerisation (C-terminal) domain	1	1
Periplasmic binding protein-like I	Nucleotide cyclase	1	1
BRCA2 helical domain	BRCA2 tower domain	1	1
ADP-ribosylation	Periplasmic binding protein-like II	1	1
Ankyrin repeat	Cap-Gly domain	1	1
POZ domain	Mannose-binding lectins	1	1
P-loop containing nucleoside triphosphate hydrolases	Cysteine proteinases	1	1
Metallo-hydrolase/oxidoreductase	beta-beta-alpha zinc fingers	1	1
Cation efflux protein transmembrane domain-like	P-loop containing nucleoside triphosphate hydrolases	1	1
PLC-like phosphodiesterases	C2 domain (Calcium/lipid-binding domain, CaLB)	1	1
HAD-like	Acyl-CoA binding protein	1	1
PH domain-like	Ypt/Rab-GAP domain of gyp1p	1	1
Protein kinase-like (PK-like)	FYVE/PHD zinc finger	1	1
Protein kinase-like (PK-like)	Rhodanese/Cell cycle control phosphatase	1	1
PH domain-like	alpha-catenin/vinculin-like	1	1
Cap-Gly domain	L domain-like	1	1
Arginase/deacetylase	RING/U-box	1	1
PUA domain-like	Nucleotidylyl transferase	1	1
BRCT domain	Homeodomain-like	1	1
SAICAR synthase-like	UDP-Glycosyltransferase/glycogen phosphorylase	1	1
GckA/TtuD-like	GckA/TtuD-like	1	1
FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP)	Protein kinase-like (PK-like)	1	1
cAMP-binding domain-like	Ras GEF	1	1
vWA-like	TSP-1 type 1 repeat	1	1
UBC-like	Class II aaRS and biotin synthetases	1	1
EF-hand	POZ domain	1	1
Trypsin-like serine proteases	Trypsin-like serine proteases	1	1
Regulator of G-protein signaling, RGS	Nucleic acid-binding proteins	1	1
(Trans)glycosidases	Six-hairpin glycosidases	1	1
DNA-binding domain	FYVE/PHD zinc finger	1	1
ADP-ribosylation	ADP-ribosylation	1	1
beta-Galactosidase/glucuronidase domain	(Trans)glycosidases	1	1
Class II aaRS ABD-related	C-terminal domain of ProRS	1	1
tRNA-binding arm	Class II aaRS and biotin synthetases	1	1
GAF domain-like	HD-domain/PDEase-like	1	1
Lipovitellin-phosvitin complex; beta-sheet shell regions	Lipovitellin-phosvitin complex; beta-sheet shell regions	1	1
PDZ domain-like	Cysteine-rich domain	1	1
EGF/Laminin	TB module/8-cys domain	1	1
Eukaryotic type KH-domain (KH-domain type I)	LigT-like	1	1
Cadherin-like	Concanavalin A-like lectins/glucanases	1	1
PapD-like	PapD-like	1	1
DBL homology domain (DH-domain)	Protein kinase-like (PK-like)	1	1
Putative DNA-binding domain	Cation efflux protein transmembrane domain-like	1	1
Nucleotide-diphospho-sugar transferases	Nucleotide-diphospho-sugar transferases	1	1
NagB/RpiA/CoA transferase-like	D-ribose-5-phosphate isomerase (RpiA), lid domain	1	1
Cadherin-like	EGF/Laminin	1	1
Regulator of G-protein signaling, RGS	PH domain-like	1	1
Mannose 6-phosphate receptor domain	PH domain-like	1	1
Galactose-binding domain-like	Methyl-accepting chemotaxis protein (MCP) signaling domain	1	1
Periplasmic binding protein-like II	Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain	1	1
Calponin-homology domain, CH-domain	WW domain	1	1
YVTN repeat-like/Quinoprotein amine dehydrogenase	WD40 repeat-like	1	1
L domain-like	PDZ domain-like	1	1
PA domain	Zn-dependent exopeptidases	1	1
L27 domain	P-loop containing nucleoside triphosphate hydrolases	1	1
Galactose-binding domain-like	Protein kinase-like (PK-like)	1	1
(Phosphotyrosine protein) phosphatases II	Nucleic acid-binding proteins	1	1
Actin-like ATPase domain	AF1104-like	1	1
WW domain	SMAD/FHA domain	1	1
Calponin-homology domain, CH-domain	SH2 domain	1	1
GST C-terminal domain-like	GST C-terminal domain-like	1	1
L9 N-domain-like	Ribonuclease H-like	1	1
Zn-dependent exopeptidases	Zn-dependent exopeptidases	1	1
P-loop containing nucleoside triphosphate hydrolases	Homeodomain-like	1	1
EGF/Laminin	ARM repeat	1	1
FAD/NAD(P)-binding domain	Ankyrin repeat	1	1
Metal cation-transporting ATPase, ATP-binding domain N	Metal cation-transporting ATPase, ATP-binding domain N	1	1
MIT domain	P-loop containing nucleoside triphosphate hydrolases	1	1
UBA-like	DNase I-like	1	1
E set domains	NHL repeat	1	1
Cullin homology domain	ARM repeat	1	1
Class I glutamine amidotransferase-like	Adenine nucleotide alpha hydrolases-like	1	1
Metalloproteases ("zincins"), catalytic domain	EGF/Laminin	1	1
Nucleic acid-binding proteins	eIF-2-alpha, C-terminal domain	1	1
TSP-1 type 1 repeat	Growth factor receptor domain	1	1
N-terminal nucleophile aminohydrolases (Ntn hydrolases)	Alpha subunit of glutamate synthase, C-terminal domain	1	1
Glucocorticoid receptor-like (DNA-binding domain)	Ribokinase-like	1	1
PX domain	Phospholipase D/nuclease	1	1
UDP-Glycosyltransferase/glycogen phosphorylase	UDP-Glycosyltransferase/glycogen phosphorylase	1	1
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex	CoA-dependent acyltransferases	1	1
ENTH/VHS domain	RNA-binding domain, RBD	1	1
HAD-like	HAD-like	1	1
WW domain	PH domain-like	1	1
PH domain-like	BSD domain-like	1	1
Regulator of G-protein signaling, RGS	PX domain	1	1
beta-beta-alpha zinc fingers	EGF/Laminin	1	1
Carbon-nitrogen hydrolase	HIT-like	1	1
ClpP/crotonase	Kelch motif	1	1
Periplasmic binding protein-like I	Protein kinase-like (PK-like)	1	1
N-terminal nucleophile aminohydrolases (Ntn hydrolases)	Thiamin diphosphate-binding fold (THDP-binding)	1	1
Tudor/PWWP/MBT	SET domain	1	1
Galactose-binding domain-like	EGF/Laminin	1	1
Immunoglobulin	Heme-dependent peroxidases	1	1
Metallo-hydrolase/oxidoreductase	UBC-like	1	1
Actin-like ATPase domain	SNARE fusion complex	1	1
GST C-terminal domain-like	Class II aaRS and biotin synthetases	1	1
PreATP-grasp domain	Rudiment single hybrid motif	1	1
Ribosomal protein L4	Ribosomal protein L4	1	1
EF-hand	Kelch motif	1	1
Dom34/Pelota N-terminal domain-like	Translational machinery components	1	1
Bet v1-like	MIT domain	1	1
Zinc-binding domain of translation initiation factor 2 beta	ARM repeat	1	1
DNA-binding domain	Bromodomain	1	1
Protein kinase-like (PK-like)	Histone-fold	1	1
Chaperone J-domain	ARM repeat	1	1
Ubiquitin-like	Ankyrin repeat	1	1
SAM/Pointed domain	GTPase activation domain, GAP	1	1
Translation proteins	Histone-fold	1	1
Polo-box domain	YVTN repeat-like/Quinoprotein amine dehydrogenase	1	1
beta-beta-alpha zinc fingers	Ribonuclease H-like	1	1
PAH2 domain	PAH2 domain	1	1
Thioredoxin-like	PUG domain-like	1	1
PX domain	RNI-like	1	1
Nucleotide-diphospho-sugar transferases	Seven-hairpin glycosidases	1	1
MIT domain	Cysteine proteinases	1	1
Ubiquitin-like	HAD-like	1	1
cAMP-binding domain-like	FabD/lysophospholipase-like	1	1
Ribonuclease H-like	HRDC-like	1	1
Tudor/PWWP/MBT	Ubiquitin-like	1	1
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain	Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain	1	1
P-loop containing nucleoside triphosphate hydrolases	Fzo-like conserved region	1	1
FF domain	SMAD/FHA domain	1	1
Radical SAM enzymes	LDL receptor-like module	1	1
PH domain-like	Trm112p-like	1	1
Trefoil	Glycosyl hydrolase domain	1	1
Tricorn protease domain 2	WD40 repeat-like	1	1
PH domain-like	Vasodilator-stimulated phosphoprotein, VASP, tetramerisation domain	1	1
Immunoglobulin	GFP-like	1	1
Cysteine-rich domain	NAD kinase/diacylglycerol kinase-like	1	1
CCCH zinc finger	ISP transmembrane anchor	1	1
FMN-linked oxidoreductases	4Fe-4S ferredoxins	1	1
Sema domain	E set domains	1	1
Rhodanese/Cell cycle control phosphatase	Cysteine proteinases	1	1
L domain-like	Actin depolymerizing proteins	1	1
PurM N-terminal domain-like	PurM C-terminal domain-like	1	1
PGBD-like	Metalloproteases ("zincins"), catalytic domain	1	1
SET domain	WW domain	1	1
L domain-like	Concanavalin A-like lectins/glucanases	1	1
Band 7/SPFH domain	PAZ domain	1	1
Protein kinase-like (PK-like)	Ypt/Rab-GAP domain of gyp1p	1	1
Kelch motif	Alpha-L RNA-binding motif	1	1
Galactose-binding domain-like	BRCT domain	1	1
Metalloproteases ("zincins"), catalytic domain	Hemopexin-like domain	1	1
L domain-like	P-loop containing nucleoside triphosphate hydrolases	1	1
PDZ domain-like	(Phosphotyrosine protein) phosphatases II	1	1
GroEL apical domain-like	SAICAR synthase-like	1	1
L domain-like	SAM/Pointed domain	1	1
Protein kinase-like (PK-like)	POZ domain	1	1
FYSH domain	Hypothetical protein AF0491, middle domain	1	1
Ribonuclease PH domain 2-like	Nop domain	1	1
PDZ domain-like	GTPase activation domain, GAP	1	1
FMN-linked oxidoreductases	Alpha subunit of glutamate synthase, C-terminal domain	1	1
Conserved domain common to transcription factors TFIIS, elongin A, CRSP70	Zinc beta-ribbon	1	1
Trimeric LpxA-like enzymes	ARM repeat	1	1
Chaperone J-domain	Sec63 N-terminal domain-like	1	1
PH domain-like	PLC-like phosphodiesterases	1	1
DEATH domain	P-loop containing nucleoside triphosphate hydrolases	1	1
eIF4e-like	Protein kinase-like (PK-like)	1	1
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase	Type II DNA topoisomerase	1	1
(Phosphotyrosine protein) phosphatases II	Chaperone J-domain	1	1
vWA-like	BRCA2 helical domain	1	1
Nqo1 middle domain-like	Nqo1C-terminal domain-like	1	1
BAR/IMD domain-like	Nucleotide-diphospho-sugar transferases	1	1
Eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment	Eukaryotic DNA topoisomerase I, dispensable insert domain	1	1
Ribosomal protein S5 domain 2-like	alpha/beta-Hydrolases	1	1
GAF domain-like	GAF domain-like	1	1
NAD(P)-binding Rossmann-fold domains	DHS-like NAD/FAD-binding domain	1	1
Metallo-dependent phosphatases	GroEL apical domain-like	1	1
Elongation factor Ts (EF-Ts), dimerisation domain	Elongation factor Ts (EF-Ts), dimerisation domain	1	1
RNA-binding domain, RBD	Ran binding protein zinc finger-like	1	1
Cytochrome c	Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor	1	1
DUSP-like	DUSP-like	1	1
Single hybrid motif	Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex	1	1
C-type lectin-like	Kringle-like	1	1
Cation efflux protein cytoplasmic domain-like	Homeodomain-like	1	1
N-terminal nucleophile aminohydrolases (Ntn hydrolases)	Metallo-dependent phosphatases	1	1
Chaperone J-domain	beta-beta-alpha zinc fingers	1	1
SNARE-like	P-loop containing nucleoside triphosphate hydrolases	1	1
vWA-like	GFP-like	1	1
Supernatant protein factor (SPF), C-terminal domain	Immunoglobulin	1	1
NAD(P)-binding Rossmann-fold domains	NAD(P)-binding Rossmann-fold domains	1	1
HAD-like	BRCT domain	1	1
WD40 repeat-like	UBC-like	1	1
FYVE/PHD zinc finger	Chromo domain-like	1	1
(Trans)glycosidases	Beta-D-glucan exohydrolase, C-terminal domain	1	1
Putative DNA-binding domain	Class II aaRS and biotin synthetases	1	1
ENTH/VHS domain	Clathrin adaptor appendage domain	1	1
Ribosomal protein L25-like	C-terminal domain of ProRS	1	1
Ubiquitin-like	The spindle assembly checkpoint protein mad2	1	1
Calpain large subunit, middle domain (domain III)	C2 domain (Calcium/lipid-binding domain, CaLB)	1	1
BEACH domain	FYVE/PHD zinc finger	1	1
CAD & PB1 domains	Cysteine-rich domain	1	1
P-loop containing nucleoside triphosphate hydrolases	Multidrug efflux transporter AcrB transmembrane domain	1	1
Macro domain-like	Zn-dependent exopeptidases	1	1
ENTH/VHS domain	Voltage-gated potassium channels	1	1
HMA, heavy metal-associated domain	HAD-like	1	1
Trefoil	Galactose mutarotase-like	1	1
Spectrin repeat	DBL homology domain (DH-domain)	1	1
Cullin homology domain	PH domain-like	1	1
WGR domain-like	Voltage-gated potassium channels	1	1
N-terminal domain of cbl (N-cbl)	SH2 domain	1	1
FYVE/PHD zinc finger	"Winged helix" DNA-binding domain	1	1
PDZ domain-like	WW domain	1	1
Supernatant protein factor (SPF), C-terminal domain	LDL receptor-like module	1	1
DNA clamp	DNA clamp	1	1
Concanavalin A-like lectins/glucanases	Putative isomerase YbhE	1	1
E set domains	Glycosyl hydrolase domain	1	1
Calponin-homology domain, CH-domain	Plakin repeat	1	1
RING/U-box	WWE domain	1	1
Glutathione synthetase ATP-binding domain-like	NAD(P)-binding Rossmann-fold domains	1	1
P-loop containing nucleoside triphosphate hydrolases	HRDC-like	1	1
WGR domain-like	Periplasmic binding protein-like I	1	1
UBA-like	UBA-like	1	1
Outer arm dynein light chain 1	Tropomyosin	1	1
TAZ domain	FYVE/PHD zinc finger	1	1
WD40 repeat-like	LanC-like	1	1
N-terminal nucleophile aminohydrolases (Ntn hydrolases)	Adenine nucleotide alpha hydrolases-like	1	1
Tex N-terminal region-like	Nucleic acid-binding proteins	1	1
DBL homology domain (DH-domain)	Fibronectin type III	1	1
beta-beta-alpha zinc fingers	WW domain	1	1
NAD-binding domain of HMG-CoA reductase	Substrate-binding domain of HMG-CoA reductase	1	1
YVTN repeat-like/Quinoprotein amine dehydrogenase	POZ domain	1	1
TPR-like	ARM repeat	1	1
TPR-like	Ribosomal protein S10	1	1
SET domain	Homeodomain-like	1	1
P-loop containing nucleoside triphosphate hydrolases	Signal peptide-binding domain	1	1
Protein kinase-like (PK-like)	NTF2-like	1	1
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase	DNA mismatch repair protein MutL	1	1
RNA-binding domain, RBD	PF0523-like	1	1
Plakin repeat	GAS2 domain-like	1	1
Kazal-type serine protease inhibitors	Kazal-type serine protease inhibitors	1	1
Trefoil	(Trans)glycosidases	1	1
Putative DNA-binding domain	Ran binding protein zinc finger-like	1	1
FAD/NAD(P)-binding domain	Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain	1	1
Actin depolymerizing proteins	VHP, Villin headpiece domain	1	1
Retrovirus zinc finger-like domains	ISP domain	1	1
RING/U-box	Immunoglobulin	1	1
TPR-like	Chaperone J-domain	1	1
Nucleotide cyclase	A DNA-binding domain in eukaryotic transcription factors	1	1
NTF2-like	UBA-like	1	1
Family A G protein-coupled receptor-like	Nucleotide-diphospho-sugar transferases	1	1
"Winged helix" DNA-binding domain	UDP-Glycosyltransferase/glycogen phosphorylase	1	1
RING/U-box	PX domain	1	1
Conserved domain common to transcription factors TFIIS, elongin A, CRSP70	Elongation factor TFIIS domain 2	1	1
TPR-like	Clavaminate synthase-like	1	1