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Domain combination pairs in Enterobacter cloacae subsp. dissolvens SDM

All pairs of domain combinations at the superfamily level are listed here.
The identification of domain pairs does not account for the possibility of non-contiguous domains. Inserted, or interlaced, domains are seen as having a simple pair ordering.

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Adjacent domain pairs graph

Graph of adjacent domain pairs.


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Domain combination pairs

828 domain combination pairs.
Click on a column heading to sort that column, or the 'View' button to see domain architetures for that domain pair combination.

Superfamily (N) Superfamily (C) Number of occurrances Number unique
"Winged helix" DNA-binding domain Periplasmic binding protein-like II 742
P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases 3613
Homodimeric domain of signal transducing histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 2915
CheY-like C-terminal effector domain of the bipartite response regulators 261
NAD(P)-binding Rossmann-fold domains Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 245
lambda repressor-like DNA-binding domains Periplasmic binding protein-like I 241
Homeodomain-like Homeodomain-like 236
NAD(P)-binding Rossmann-fold domains 6-phosphogluconate dehydrogenase C-terminal domain-like 166
Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) 166
Actin-like ATPase domain Actin-like ATPase domain 165
Homeodomain-like Tetracyclin repressor-like, C-terminal domain 151
Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain 144
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB transmembrane domain 133
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 133
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB transmembrane domain 133
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 133
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 133
Multidrug resistance efflux transporter EmrE Multidrug resistance efflux transporter EmrE 133
Composite domain of metallo-dependent hydrolases Metallo-dependent hydrolases 125
ABC transporter transmembrane region P-loop containing nucleoside triphosphate hydrolases 122
GroES-like NAD(P)-binding Rossmann-fold domains 122
P-loop containing nucleoside triphosphate hydrolases MOP-like 121
Thiolase-like Thiolase-like 123
Formate dehydrogenase/DMSO reductase, domains 1-3 ADC-like 124
"Winged helix" DNA-binding domain GntR ligand-binding domain-like 122
Glutathione synthetase ATP-binding domain-like PreATP-grasp domain 116
Thioredoxin-like GST C-terminal domain-like 111
P-loop containing nucleoside triphosphate hydrolases Translation proteins 97
Aspartate receptor, ligand-binding domain Methyl-accepting chemotaxis protein (MCP) signaling domain 92
"Winged helix" DNA-binding domain NagB/RpiA/CoA transferase-like 91
Zn-dependent exopeptidases Bacterial exopeptidase dimerisation domain 91
Thiamin diphosphate-binding fold (THDP-binding) DHS-like NAD/FAD-binding domain 91
Homeodomain-like SIS domain 91
Riboflavin synthase domain-like Ferredoxin reductase-like, C-terminal NADP-linked domain 95
Sigma2 domain of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 93
Nucleotide cyclase EAL domain-like 93
Class I glutamine amidotransferase-like Homeodomain-like 82
Regulatory protein AraC Homeodomain-like 83
PapD-like Periplasmic chaperone C-domain 81
Enolase N-terminal domain-like Enolase C-terminal domain-like 71
RmlC-like cupins Homeodomain-like 72
Homodimeric domain of signal transducing histidine kinase CheY-like 77
HAMP domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 74
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheY-like 77
Thiamin diphosphate-binding fold (THDP-binding) TK C-terminal domain-like 74
P-loop containing nucleoside triphosphate hydrolases Homeodomain-like 65
Calcium ATPase, transduction domain A Calcium ATPase, transmembrane domain M 65
"Winged helix" DNA-binding domain PLP-dependent transferases 61
(Trans)glycosidases Glycosyl hydrolase domain 65
Calcium ATPase, transduction domain A HAD-like 65
MurD-like peptide ligases, catalytic domain MurD-like peptide ligases, peptide-binding domain 63
Nucleotidylyl transferase Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 66
ACT-like ACT-like 65
Aminoacid dehydrogenase-like, N-terminal domain NAD(P)-binding Rossmann-fold domains 63
PYP-like sensor domain (PAS domain) ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 66
"Winged helix" DNA-binding domain GAF domain-like 61
Formate/glycerate dehydrogenase catalytic domain-like NAD(P)-binding Rossmann-fold domains 63
Sm-like ribonucleoproteins Mechanosensitive channel protein MscS (YggB), C-terminal domain 63
Histidine-containing phosphotransfer domain, HPT domain ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 66
HAD-like Calcium ATPase, transmembrane domain M 65
P-loop containing nucleoside triphosphate hydrolases EF-G C-terminal domain-like 65
Alpha-L RNA-binding motif Pseudouridine synthase 51
"Winged helix" DNA-binding domain Dimeric alpha+beta barrel 51
PreATP-grasp domain Rudiment single hybrid motif 52
PurM N-terminal domain-like PurM C-terminal domain-like 52
Ferredoxin reductase-like, C-terminal NADP-linked domain 2Fe-2S ferredoxin-like 52
P-loop containing nucleoside triphosphate hydrolases "Winged helix" DNA-binding domain 54
lambda repressor-like DNA-binding domains RmlC-like cupins 51
Nucleic acid-binding proteins Nucleic acid-binding proteins 54
"Winged helix" DNA-binding domain Chorismate lyase-like 51
Histidine-containing phosphotransfer domain, HPT domain Homodimeric domain of signal transducing histidine kinase 55
HAMP domain-like Homodimeric domain of signal transducing histidine kinase 53
FAD/NAD(P)-binding domain FAD-linked reductases, C-terminal domain 52
P-loop containing nucleoside triphosphate hydrolases Ribosomal protein S5 domain 2-like 54
E set domains (Trans)glycosidases 54
Riboflavin synthase domain-like 2Fe-2S ferredoxin-like 52
Glutathione synthetase ATP-binding domain-like Rudiment single hybrid motif 52
CBS-domain pair FAD-binding/transporter-associated domain-like 51
MetI-like MetI-like 53
HlyD-like secretion proteins HlyD-like secretion proteins 42
P-loop containing nucleoside triphosphate hydrolases EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 43
P-loop containing nucleoside triphosphate hydrolases post-AAA+ oligomerization domain-like 42
FabD/lysophospholipase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 42
Translation proteins EF-G C-terminal domain-like 43
Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 42
PYP-like sensor domain (PAS domain) Homodimeric domain of signal transducing histidine kinase 44
NAD(P)-binding Rossmann-fold domains LDH C-terminal domain-like 42
Periplasmic binding protein-like II Periplasmic binding protein-like II 44
PLP-binding barrel Alanine racemase C-terminal domain-like 42
Phospholipase D/nuclease Phospholipase D/nuclease 43
Translation proteins EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 43
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 43
EF-G C-terminal domain-like EF-G C-terminal domain-like 43
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Ribosomal protein S5 domain 2-like 44
TrkA C-terminal domain-like TrkA C-terminal domain-like 42
FAD/NAD(P)-binding domain FAD/NAD-linked reductases, dimerisation (C-terminal) domain 41
Nucleic acid-binding proteins Class II aaRS and biotin synthetases 43
Mechanosensitive channel protein MscS (YggB), transmembrane region Sm-like ribonucleoproteins 42
Nucleic acid-binding proteins RuvA domain 2-like 44
PYP-like sensor domain (PAS domain) Nucleotide cyclase 43
Mechanosensitive channel protein MscS (YggB), transmembrane region Mechanosensitive channel protein MscS (YggB), C-terminal domain 42
6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 43
HD-domain/PDEase-like ACT-like 32
CheY-like Histidine-containing phosphotransfer domain, HPT domain 33
Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like 33
FMN-binding split barrel UbiD C-terminal domain-like 32
Nitrite/Sulfite reductase N-terminal domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 33
FAD/NAD(P)-binding domain FAD/NAD(P)-binding domain 33
Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 32
FKBP-like Triger factor/SurA peptide-binding domain-like 33
GAF domain-like Nucleotide cyclase 32
Nucleotidyltransferase ACT-like 32
IlvD/EDD N-terminal domain-like LeuD/IlvD-like 31
Lysozyme-like beta-lactamase/transpeptidase-like 32
Translation proteins SH3-like domain Nucleic acid-binding proteins 32
Periplasmic binding protein-like II ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 33
EF-G C-terminal domain-like Ribosomal protein S5 domain 2-like 32
Glutamine synthetase, N-terminal domain Glutamine synthetase/guanido kinase 31
Double Clp-N motif P-loop containing nucleoside triphosphate hydrolases 32
Phosphoglucomutase, first 3 domains Phosphoglucomutase, C-terminal domain 32
Folate-binding domain Aminomethyltransferase beta-barrel domain 31
P-loop containing nucleoside triphosphate hydrolases GAF domain-like 33
Galactose mutarotase-like (Trans)glycosidases 33
Calcium ATPase, transduction domain A Metal cation-transporting ATPase, ATP-binding domain N 32
Periplasmic binding protein-like II Homodimeric domain of signal transducing histidine kinase 33
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 32
PYP-like sensor domain (PAS domain) EAL domain-like 32
PLP-dependent transferases Ornithine decarboxylase C-terminal domain 32
NagB/RpiA/CoA transferase-like NagB/RpiA/CoA transferase-like 32
ValRS/IleRS/LeuRS editing domain Nucleotidylyl transferase 33
ValRS/IleRS/LeuRS editing domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 33
Class II aaRS and biotin synthetases Class II aaRS ABD-related 33
Penicillin binding protein dimerisation domain beta-lactamase/transpeptidase-like 31
DNA/RNA polymerases Lesion bypass DNA polymerase (Y-family), little finger domain 32
Trypsin-like serine proteases PDZ domain-like 33
Periplasmic binding protein-like II CheY-like 33
MurCD N-terminal domain MurD-like peptide ligases, catalytic domain 31
PDZ domain-like PDZ domain-like 33
Methylated DNA-protein cysteine methyltransferase domain Methylated DNA-protein cysteine methyltransferase, C-terminal domain 32
P-loop containing nucleoside triphosphate hydrolases CBS-domain pair 31
Nucleotidyltransferase HD-domain/PDEase-like 32
Phosphoglucomutase, first 3 domains Phosphoglucomutase, first 3 domains 32
Acyl-CoA dehydrogenase NM domain-like Acyl-CoA dehydrogenase C-terminal domain-like 32
MurCD N-terminal domain MurD-like peptide ligases, peptide-binding domain 31
Sensory domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 33
Metal cation-transporting ATPase, ATP-binding domain N Calcium ATPase, transmembrane domain M 32
Ribosomal protein S5 domain 2-like GHMP Kinase, C-terminal domain 31
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 33
beta-lactamase/transpeptidase-like Penicillin-binding protein associated domain 31
Metal cation-transporting ATPase, ATP-binding domain N HAD-like 32
Phosphoenolpyruvate/pyruvate domain PK C-terminal domain-like 32
HD-domain/PDEase-like TGS-like 21
N-terminal domain of alpha and beta subunits of F1 ATP synthase P-loop containing nucleoside triphosphate hydrolases 21
Formyltransferase FMT C-terminal domain-like 22
Carbamate kinase-like ACT-like 22
FAD/NAD(P)-binding domain Nitrite/Sulfite reductase N-terminal domain-like 22
CheY-binding domain of CheA Homodimeric domain of signal transducing histidine kinase 22
Cupredoxins Cupredoxins 21
gp5 N-terminal domain-like Phage fibre proteins 21
Translation proteins Ribosomal protein S5 domain 2-like 21
Chemotaxis receptor methyltransferase CheR, N-terminal domain S-adenosyl-L-methionine-dependent methyltransferases 21
DNA ligase/mRNA capping enzyme, catalytic domain RuvA domain 2-like 22
Homeodomain-like Methylated DNA-protein cysteine methyltransferase domain 21
Class II aaRS and biotin synthetases ThrRS/AlaRS common domain 22
AhpD-like AhpD-like 21
Carbamate kinase-like Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 22
Aldolase 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 22
Nucleotidyltransferase Nucleotidyltransferase substrate binding subunit/domain 22
2Fe-2S ferredoxin-like alpha-helical ferredoxin 21
Ribosomal protein S5 domain 2-like Type II DNA topoisomerase 22
CheC-like Surface presentation of antigens (SPOA) 21
Sensory domain-like Methyl-accepting chemotaxis protein (MCP) signaling domain 22
HAMP domain-like CheY-like 22
CheY-binding domain of CheA ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 22
Galactose mutarotase-like E set domains 22
ISP domain Bet v1-like 21
CheY-like P-loop containing nucleoside triphosphate hydrolases 21
GroES-like GroES-like 21
DNA ligase/mRNA capping enzyme, catalytic domain Nucleic acid-binding proteins 22
Nucleotidyltransferase TGS-like 21
MFS general substrate transporter MFS general substrate transporter 21
Nucleotide-diphospho-sugar transferases Trimeric LpxA-like enzymes 21
CoA-dependent acyltransferases CoA-dependent acyltransferases 22
Succinyl-CoA synthetase domains Glutathione synthetase ATP-binding domain-like 22
Ada DNA repair protein, N-terminal domain (N-Ada 10) Methylated DNA-protein cysteine methyltransferase, C-terminal domain 21
Siroheme synthase middle domains-like Tetrapyrrole methylase 21
Phosphohistidine domain Phosphoenolpyruvate/pyruvate domain 22
Carbamate kinase-like NAD(P)-binding Rossmann-fold domains 22
Homeodomain-like Methylated DNA-protein cysteine methyltransferase, C-terminal domain 21
Phage tail proteins Phage fibre proteins 21
PK beta-barrel domain-like PK C-terminal domain-like 21
FAD-binding/transporter-associated domain-like FAD-linked oxidases, C-terminal domain 22
MurE/MurF N-terminal domain MurD-like peptide ligases, catalytic domain 21
FAD/NAD(P)-binding domain Nitrite and sulphite reductase 4Fe-4S domain-like 22
Periplasmic binding protein-like II Histidine-containing phosphotransfer domain, HPT domain 22
"Winged helix" DNA-binding domain Actin-like ATPase domain 21
Aconitase iron-sulfur domain LeuD/IlvD-like 22
Galactose mutarotase-like Glycosyl hydrolase domain 22
PTS system IIB component-like Phoshotransferase/anion transport protein 22
NAD(P)-binding Rossmann-fold domains ACT-like 22
CheY-like Homeodomain-like 21
GAF domain-like Homeodomain-like 22
FMN-linked oxidoreductases FAD/NAD(P)-binding domain 22
Cation efflux protein transmembrane domain-like Cation efflux protein cytoplasmic domain-like 21
Nucleotidyltransferase Poly A polymerase C-terminal region-like 21
CheY-binding domain of CheA CheW-like 22
CBS-domain pair MgtE membrane domain-like 22
P-loop containing nucleoside triphosphate hydrolases ACT-like 21
Metallo-dependent phosphatases 5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain 22
CheY-like CheY-like 22
P-loop containing nucleoside triphosphate hydrolases PYP-like sensor domain (PAS domain) 22
R1 subunit of ribonucleotide reductase, N-terminal domain PFL-like glycyl radical enzymes 21
Ribosomal protein S5 domain 2-like Ribonuclease PH domain 2-like 22
Single hybrid motif Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 22
N-terminal domain of MutM-like DNA repair proteins S13-like H2TH domain 21
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex CoA-dependent acyltransferases 22
ClpP/crotonase 6-phosphogluconate dehydrogenase C-terminal domain-like 21
CorA soluble domain-like Magnesium transport protein CorA, transmembrane region 21
TPR-like TPR-like 22
Sensory domain-like PYP-like sensor domain (PAS domain) 22
CheY-like Methylesterase CheB, C-terminal domain 21
Type II DNA topoisomerase GyrA/ParC C-terminal domain-like 21
DsbC/DsbG N-terminal domain-like Thioredoxin-like 21
Fe,Mn superoxide dismutase (SOD), N-terminal domain Fe,Mn superoxide dismutase (SOD), C-terminal domain 21
Homodimeric domain of signal transducing histidine kinase CheW-like 22
NAD(P)-binding Rossmann-fold domains UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 21
(Trans)glycosidases Beta-D-glucan exohydrolase, C-terminal domain 21
Single hybrid motif CoA-dependent acyltransferases 22
Actin-like ATPase domain Heat shock protein 70kD (HSP70), peptide-binding domain 21
HMA, heavy metal-associated domain Calcium ATPase, transduction domain A 22
P-loop containing nucleoside triphosphate hydrolases C-terminal domain of alpha and beta subunits of F1 ATP synthase 21
GAF domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 22
Pectin lyase-like Autotransporter 22
PK beta-barrel domain-like Phosphoenolpyruvate/pyruvate domain 21
Succinyl-CoA synthetase domains Succinyl-CoA synthetase domains 22
Histidine-containing phosphotransfer domain, HPT domain CheY-binding domain of CheA 22
Aspartate/glutamate racemase Aspartate/glutamate racemase 21
Ada DNA repair protein, N-terminal domain (N-Ada 10) Methylated DNA-protein cysteine methyltransferase domain 21
P-loop containing nucleoside triphosphate hydrolases Glucocorticoid receptor-like (DNA-binding domain) 22
"Winged helix" DNA-binding domain C-terminal domain of arginine repressor 21
L30e-like alpha/beta knot 22
ACP-like CoA-dependent acyltransferases 22
Actin-like ATPase domain Heat shock protein 70kD (HSP70), C-terminal subdomain 21
HMA, heavy metal-associated domain Calcium ATPase, transmembrane domain M 22
CheY-like Ornithine decarboxylase C-terminal domain 21
Acylphosphatase/BLUF domain-like EAL domain-like 21
Zinc beta-ribbon Zinc beta-ribbon 22
Acetyl-CoA synthetase-like ACP-like 22
Glucose permease domain IIB Duplicated hybrid motif 22
Heat shock protein 70kD (HSP70), peptide-binding domain Heat shock protein 70kD (HSP70), C-terminal subdomain 21
N-terminal domain of MutM-like DNA repair proteins Glucocorticoid receptor-like (DNA-binding domain) 21
ClpP/crotonase NAD(P)-binding Rossmann-fold domains 21
"Winged helix" DNA-binding domain "Winged helix" DNA-binding domain 22
Rhodanese/Cell cycle control phosphatase Rhodanese/Cell cycle control phosphatase 22
tRNA-binding arm Class II aaRS and biotin synthetases 21
LuxS/MPP-like metallohydrolase LuxS/MPP-like metallohydrolase 22
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Type II DNA topoisomerase 22
Nucleic acid-binding proteins P-loop containing nucleoside triphosphate hydrolases 22
NAD(P)-binding Rossmann-fold domains Succinyl-CoA synthetase domains 22
6-phosphogluconate dehydrogenase C-terminal domain-like UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 21
HMA, heavy metal-associated domain HAD-like 22
GreA transcript cleavage protein, N-terminal domain FKBP-like 21
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheW-like 22
CheY-like PLP-dependent transferases 21
NAD(P)-binding Rossmann-fold domains Tetrapyrrole methylase 21
Integrin alpha N-terminal domain beta-Roll 22
Arabinanase/levansucrase/invertase Concanavalin A-like lectins/glucanases 21
Nqo5-like HydB/Nqo4-like 21
Actin-like ATPase domain HD-domain/PDEase-like 21
LysM domain L,D-transpeptidase catalytic domain-like 21
MalF N-terminal region-like MetI-like 22
S13-like H2TH domain Glucocorticoid receptor-like (DNA-binding domain) 21
H-NS histone-like proteins H-NS histone-like proteins 21
Phage tail proteins gp5 N-terminal domain-like 21
PIN domain-like 5' to 3' exonuclease, C-terminal subdomain 22
E set domains Glycosyl hydrolase domain 22
Nicotinate/Quinolinate PRTase N-terminal domain-like Nicotinate/Quinolinate PRTase C-terminal domain-like 21
Acyl-CoA N-acyltransferases (Nat) Nucleotidylyl transferase 21
TGS-like ACT-like 21
NAD(P)-binding Rossmann-fold domains Siroheme synthase middle domains-like 21
N-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase 21
Ribonuclease H-like DNA/RNA polymerases 22
cAMP-binding domain-like "Winged helix" DNA-binding domain 21
MurE/MurF N-terminal domain MurD-like peptide ligases, peptide-binding domain 21
PH0987 N-terminal domain-like Cyclophilin-like 22
Phage tail proteins Phage tail proteins 21
Acetyl-CoA synthetase-like CoA-dependent acyltransferases 22
Histidine-containing phosphotransfer domain, HPT domain CheW-like 22
P-loop containing nucleoside triphosphate hydrolases Restriction endonuclease-like 22
Ada DNA repair protein, N-terminal domain (N-Ada 10) Homeodomain-like 21
FliG FliG 21
Glutamyl tRNA-reductase catalytic, N-terminal domain NAD(P)-binding Rossmann-fold domains 11
S-adenosyl-L-methionine-dependent methyltransferases Putative methyltransferase TM0872, insert domain 11
TrkA C-terminal domain-like FAD-binding/transporter-associated domain-like 11
Homo-oligomeric flavin-containing Cys decarboxylases, HFCD CoaB-like 11
GIY-YIG endonuclease RuvA domain 2-like 11
"Winged helix" DNA-binding domain Phoshotransferase/anion transport protein 11
Formate/glycerate dehydrogenase catalytic domain-like ACT-like 11
DNA repair protein MutS, domain II P-loop containing nucleoside triphosphate hydrolases 11
Insert subdomain of RNA polymerase alpha subunit RBP11-like subunits of RNA polymerase 11
NAD(P)-binding Rossmann-fold domains 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
Homeodomain-like Probable bacterial effector-binding domain 11
"Winged helix" DNA-binding domain PTS system IIB component-like 11
Globin-like Ferredoxin reductase-like, C-terminal NADP-linked domain 11
P-loop containing nucleoside triphosphate hydrolases Helical scaffold and wing domains of SecA 11
Zinc beta-ribbon DNA primase DnaG, C-terminal domain 11
Molybdenum cofactor biosynthesis proteins MoeA C-terminal domain-like 11
Adenine nucleotide alpha hydrolases-like PheT/TilS domain 11
PreATP-grasp domain Single hybrid motif 11
Nucleotidylyl transferase Alpha-L RNA-binding motif 11
(Trans)glycosidases Class I glutamine amidotransferase-like 11
Putative DNA-binding domain Class II aaRS and biotin synthetases 11
FMN-linked oxidoreductases Nucleotide-binding domain 11
ABC transporter involved in vitamin B12 uptake, BtuC ABC transporter involved in vitamin B12 uptake, BtuC 11
SacY-like RNA-binding domain PTS-regulatory domain, PRD 11
P-loop containing nucleoside triphosphate hydrolases HprK N-terminal domain-like 11
Nucleic acid-binding proteins Prokaryotic type KH domain (KH-domain type II) 11
Ribulose-phoshate binding barrel Ribulose-phoshate binding barrel 11
beta-N-acetylhexosaminidase-like domain (Trans)glycosidases 11
Ribonuclease PH domain 2-like Nucleic acid-binding proteins 11
Ribbon-helix-helix Replication modulator SeqA, C-terminal DNA-binding domain 11
N-terminal domain of bifunctional PutA protein FAD-linked oxidoreductase 11
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphohistidine domain 11
P-loop containing nucleoside triphosphate hydrolases FtsH protease domain-like 11
FAD/NAD(P)-binding domain HI0933 insert domain-like 11
all-alpha NTP pyrophosphatases all-alpha NTP pyrophosphatases 11
Methionine synthase domain Methionine synthase activation domain-like 11
E set domains Chitinase insertion domain 11
Adenine nucleotide alpha hydrolases-like MesJ substrate recognition domain-like 11
4Fe-4S ferredoxins Formate dehydrogenase/DMSO reductase, domains 1-3 11
NAD(P)-binding Rossmann-fold domains TrkA C-terminal domain-like 11
Pheromone-binding domain of LuxR-like quorum-sensing transcription factors C-terminal effector domain of the bipartite response regulators 11
HMA, heavy metal-associated domain HMA, heavy metal-associated domain 11
FAD-binding/transporter-associated domain-like alpha-helical ferredoxin 11
Dihydropteroate synthetase-like Methionine synthase domain 11
FMN-linked oxidoreductases Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 11
Leukotriene A4 hydrolase N-terminal domain Metalloproteases ("zincins"), catalytic domain 11
PYP-like sensor domain (PAS domain) Sporulation response regulatory protein Spo0B 11
4Fe-4S ferredoxins ADC-like 11
Adenine nucleotide alpha hydrolases-like Adenine nucleotide alpha hydrolases-like 11
RNase III domain-like dsRNA-binding domain-like 11
Ribonuclease PH domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
Ribbon-helix-helix N-terminal domain of bifunctional PutA protein 11
Coiled-coil domain of nucleotide exchange factor GrpE Head domain of nucleotide exchange factor GrpE 11
Pseudouridine synthase PUA domain-like 11
Nucleotidylyl transferase Riboflavin kinase-like 11
Single hybrid motif Single hybrid motif 11
HAD-like Ribosomal protein S5 domain 2-like 11
Ribosomal protein L6 Ribosomal protein L6 11
Rudiment single hybrid motif Cyclophilin-like 11
Domain of the SRP/SRP receptor G-proteins P-loop containing nucleoside triphosphate hydrolases 11
Homeodomain-like Ribonuclease H-like 11
Glutathione synthetase ATP-binding domain-like Single hybrid motif 11
S-adenosylmethionine synthetase S-adenosylmethionine synthetase 11
Putative DNA-binding domain Initiation factor IF2/eIF5b, domain 3 11
Glutathione synthetase ATP-binding domain-like Phosphoenolpyruvate/pyruvate domain 11
DNA primase core DNA primase DnaG, C-terminal domain 11
Peptidase/esterase 'gauge' domain alpha/beta-Hydrolases 11
Metallo-hydrolase/oxidoreductase Flavoproteins 11
PYP-like sensor domain (PAS domain) Methyl-accepting chemotaxis protein (MCP) signaling domain 11
GroEL-intermediate domain like GroEL apical domain-like 11
Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases 11
Sensory domain-like Nucleotide cyclase 11
Class II aaRS and biotin synthetases Anticodon-binding domain of PheRS 11
Macro domain-like Zn-dependent exopeptidases 11
TPR-like C-terminal effector domain of the bipartite response regulators 11
Transcription factor NusA, N-terminal domain Nucleic acid-binding proteins 11
ALDH-like Thioesterase/thiol ester dehydrase-isomerase 11
E set domains PKD domain 11
P-loop containing nucleoside triphosphate hydrolases TrpR-like 11
Aminoacid dehydrogenase-like, N-terminal domain Isocitrate/Isopropylmalate dehydrogenase-like 11
Nucleic acid-binding proteins PheT/TilS domain 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Nucleotidylyl transferase 11
Nucleotidyltransferase substrate binding subunit/domain Nucleotidyltransferase substrate binding subunit/domain 11
EAL domain-like HD-domain/PDEase-like 11
P-loop containing nucleoside triphosphate hydrolases RecA protein, C-terminal domain 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
Cytidine deaminase-like Cytidine deaminase-like 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases Nucleic acid-binding proteins 11
Tex N-terminal region-like Ribonuclease H-like 11
YrdC/RibB Actin-like ATPase domain 11
PurM N-terminal domain-like Class I glutamine amidotransferase-like 11
Thioredoxin-like Thioredoxin-like 11
GroEL equatorial domain-like GroEL-intermediate domain like 11
4Fe-4S ferredoxins Radical SAM enzymes 11
P-loop containing nucleoside triphosphate hydrolases Signal peptide-binding domain 11
MOSC N-terminal domain-like 2Fe-2S ferredoxin-like 11
Riboflavin synthase domain-like Riboflavin synthase domain-like 11
FabD/lysophospholipase-like CoA-dependent acyltransferases 11
Nitrite/Sulfite reductase N-terminal domain-like ISP domain 11
Flavoproteins Ferredoxin reductase-like, C-terminal NADP-linked domain 11
Translation proteins "Winged helix" DNA-binding domain 11
FAH FAH 11
2Fe-2S ferredoxin-like ADC-like 11
PGBD-like L,D-transpeptidase catalytic domain-like 11
ACP-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 11
Nucleic acid-binding proteins GAD domain-like 11
Nucleotidyltransferase substrate binding subunit/domain ACT-like 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) PRTase-like 11
2Fe-2S ferredoxin-like Formate dehydrogenase/DMSO reductase, domains 1-3 11
HesB-like domain Fe-S cluster assembly (FSCA) domain-like 11
Cysteine proteinases Glutathione synthetase ATP-binding domain-like 11
Urease metallochaperone UreE, N-terminal domain Urease metallochaperone UreE, C-terminal domain 11
Ribosomal L11/L12e N-terminal domain Ribosomal protein L11, C-terminal domain 11
P-loop containing nucleoside triphosphate hydrolases Hypothetical protein YjiA, C-terminal domain 11
NAD(P)-binding Rossmann-fold domains Glutathione synthetase ATP-binding domain-like 11
PPK N-terminal domain-like PHP14-like 11
Zinc beta-ribbon DNA primase core 11
Carbamate kinase-like PUA domain-like 11
DnaK suppressor protein DksA, alpha-hairpin domain Glucocorticoid receptor-like (DNA-binding domain) 11
Amine oxidase N-terminal region Amine oxidase catalytic domain 11
Galactose mutarotase-like Putative glucosidase YicI, C-terminal domain 11
Putative DNA-binding domain P-loop containing nucleoside triphosphate hydrolases 11
Tex N-terminal region-like Nucleic acid-binding proteins 11
Class II aaRS and biotin synthetases Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) 11
Globin-like Riboflavin synthase domain-like 11
Aconitase B, N-terminal domain LeuD/IlvD-like 11
Creatinase/prolidase N-terminal domain Creatinase/aminopeptidase 11
Putative DNA-binding domain Translation proteins 11
FAD-linked oxidases, C-terminal domain alpha-helical ferredoxin 11
Class II aaRS and biotin synthetases YbaK/ProRS associated domain 11
(Trans)glycosidases PKD domain 11
PTS-regulatory domain, PRD PTS system IIB component-like 11
NusB-like S-adenosyl-L-methionine-dependent methyltransferases 11
Thiolase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 11
Barwin-like endoglucanases Sporulation related repeat 11
Acylphosphatase/BLUF domain-like YrdC/RibB 11
HAMP domain-like Histidine-containing phosphotransfer domain, HPT domain 11
RuvA domain 2-like BRCT domain 11
Ribosomal protein S5 domain 2-like Nucleic acid-binding proteins 11
Class I glutamine amidotransferase-like Adenine nucleotide alpha hydrolases-like 11
PurS-like FGAM synthase PurL, linker domain 11
NTF2-like Sec-C motif 11
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphoenolpyruvate/pyruvate domain 11
Glutamyl tRNA-reductase catalytic, N-terminal domain Glutamyl tRNA-reductase dimerization domain 11
Probable ACP-binding domain of malonyl-CoA ACP transacylase PLP-dependent transferases 11
TGS-like Class II aaRS and biotin synthetases 11
PheT/TilS domain Anticodon-binding domain of PheRS 11
DNA repair protein MutS, domain I P-loop containing nucleoside triphosphate hydrolases 11
MOP-like MOP-like 11
PK beta-barrel domain-like 2Fe-2S ferredoxin-like 11
Class I glutamine amidotransferase-like LD-carboxypeptidase A C-terminal domain-like 11
P-loop containing nucleoside triphosphate hydrolases Isocitrate/Isopropylmalate dehydrogenase-like 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) SIS domain 11
Periplasmic binding protein-like II ACT-like 11
Chaperone J-domain DnaJ/Hsp40 cysteine-rich domain 11
Ribokinase-like Nucleotidylyl transferase 11
Integrin alpha N-terminal domain Integrin alpha N-terminal domain 11
Protein kinase-like (PK-like) PYP-like sensor domain (PAS domain) 11
Translation proteins Initiation factor IF2/eIF5b, domain 3 11
Copper amine oxidase, domain N Amine oxidase catalytic domain 11
"Winged helix" DNA-binding domain MukF C-terminal domain-like 11
"Winged helix" DNA-binding domain Acyl-CoA N-acyltransferases (Nat) 11
Methylglyoxal synthase-like Cytidine deaminase-like 11
Nqo1 FMN-binding domain-like Nqo1C-terminal domain-like 11
(Trans)glycosidases Chitinase insertion domain 11
5' to 3' exonuclease, C-terminal subdomain Ribonuclease H-like 11
"Winged helix" DNA-binding domain C-terminal domain of transcriptional repressors 11
Nucleic acid-binding proteins Anticodon-binding domain of PheRS 11
PTS system IIB component-like PTS system IIB component-like 11
Protein kinase-like (PK-like) GAF domain-like 11
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Pyrimidine nucleoside phosphorylase C-terminal domain 11
N-utilization substance G protein NusG, N-terminal domain Translation proteins SH3-like domain 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Nucleic acid-binding proteins 11
CoA-dependent acyltransferases alpha/beta-Hydrolases 11
FAD/NAD(P)-binding domain ISP domain 11
Rhodanese/Cell cycle control phosphatase P-loop containing nucleoside triphosphate hydrolases 11
Band 7/SPFH domain Band 7/SPFH domain 11
Flavoproteins Rubredoxin-like 11
4Fe-4S ferredoxins Iron-sulfur subunit of formate dehydrogenase N, transmembrane anchor 11
Transcription factor NusA, N-terminal domain Rad51 N-terminal domain-like 11
Trigger factor ribosome-binding domain FKBP-like 11
ACP-like Thiolase-like 11
CheW-like CheY-like 11
Galactose-binding domain-like Galactose mutarotase-like 11
P-loop containing nucleoside triphosphate hydrolases Acyl-CoA N-acyltransferases (Nat) 11
N-terminal domain of bifunctional PutA protein ALDH-like 11
GIY-YIG endonuclease C-terminal UvrC-binding domain of UvrB 11
TK C-terminal domain-like 4Fe-4S ferredoxins 11
Glutathione synthetase ATP-binding domain-like PH0987 N-terminal domain-like 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase DNA mismatch repair protein MutL 11
GAF domain-like PYP-like sensor domain (PAS domain) 11
Bacterial muramidases Lysozyme-like 11
TolB, N-terminal domain Tricorn protease N-terminal domain 11
ACP-like ACP-like 11
S-adenosyl-L-methionine-dependent methyltransferases S-adenosyl-L-methionine-dependent methyltransferases 11
Class II aaRS and biotin synthetases C-terminal domain of transcriptional repressors 11
2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain Alkaline phosphatase-like 11
Periplasmic binding protein-like I Homeodomain-like 11
Glycerol-3-phosphate (1)-acyltransferase Acyl-CoA N-acyltransferases (Nat) 11
P-loop containing nucleoside triphosphate hydrolases CarD-like 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain II 11
PurM N-terminal domain-like PurM N-terminal domain-like 11
NAD(P)-binding Rossmann-fold domains Isocitrate/Isopropylmalate dehydrogenase-like 11
beta-Galactosidase/glucuronidase domain (Trans)glycosidases 11
P-loop containing nucleoside triphosphate hydrolases C-terminal effector domain of the bipartite response regulators 11
DeoB insert domain-like Alkaline phosphatase-like 11
HRDC-like HRDC-like 11
PurS-like Class I glutamine amidotransferase-like 11
Nucleotidylyl transferase P-loop containing nucleoside triphosphate hydrolases 11
Protein kinase-like (PK-like) P-loop containing nucleoside triphosphate hydrolases 11
Ribonuclease PH domain 2-like Ribonuclease PH domain 2-like 11
Ribonuclease H-like RuvA domain 2-like 11
Translation proteins Translation proteins 11
Epsilon subunit of F1F0-ATP synthase N-terminal domain Epsilon subunit of F1F0-ATP synthase C-terminal domain 11
alpha-helical ferredoxin Nucleotide-binding domain 11
Pili subunits Pili subunits 11
HisI-like all-alpha NTP pyrophosphatases 11
P-loop containing nucleoside triphosphate hydrolases TGS-like 11
HIT-like HIT-like 11
Pre-protein crosslinking domain of SecA Helical scaffold and wing domains of SecA 11
Prokaryotic type I DNA topoisomerase Zinc beta-ribbon 11
Rad51 N-terminal domain-like Rad51 N-terminal domain-like 11
Nucleotidylyl transferase An anticodon-binding domain of class I aminoacyl-tRNA synthetases 11
Cryptochrome/photolyase, N-terminal domain Cryptochrome/photolyase FAD-binding domain 11
"Winged helix" DNA-binding domain Class II aaRS and biotin synthetases 11
DnaJ/Hsp40 cysteine-rich domain HSP40/DnaJ peptide-binding domain 11
Eukaryotic type KH-domain (KH-domain type I) Nucleic acid-binding proteins 11
P-loop containing nucleoside triphosphate hydrolases TPR-like 11
Obg GTP-binding protein N-terminal domain P-loop containing nucleoside triphosphate hydrolases 11
Rudiment single hybrid motif Single hybrid motif 11
P-loop containing nucleoside triphosphate hydrolases Class I glutamine amidotransferase-like 11
Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain Pyrimidine nucleoside phosphorylase C-terminal domain 11
Carbamate kinase-like Acyl-CoA N-acyltransferases (Nat) 11
Glutathione synthetase ATP-binding domain-like Glutathione synthetase ATP-binding domain-like 11
Insert subdomain of RNA polymerase alpha subunit C-terminal domain of RNA polymerase alpha subunit 11
MgtE N-terminal domain-like MgtE membrane domain-like 11
Nucleotide-binding domain FAD/NAD(P)-binding domain 11
Rho N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 11
Thiolase-like FabD/lysophospholipase-like 11
Tryptophan synthase beta subunit-like PLP-dependent enzymes CBS-domain pair 11
Cytochrome c oxidase subunit II-like, transmembrane region Cupredoxins 11
"Winged helix" DNA-binding domain PTS-regulatory domain, PRD 11
GspK insert domain-like GspK insert domain-like 11
PTS system fructose IIA component-like PTS IIb component 11
PPK N-terminal domain-like Phospholipase D/nuclease 11
dsRNA-binding domain-like Ribosomal protein S5 domain 2-like 11
DAK1/DegV-like DhaL-like 11
Nucleic acid-binding proteins DNA helicase RuvA subunit, C-terminal domain 11
PH0987 N-terminal domain-like Single hybrid motif 11
GroEL equatorial domain-like GroEL apical domain-like 11
ClpP/crotonase ClpP/crotonase 11
TGS-like Class II aaRS ABD-related 11
Glutathione synthetase ATP-binding domain-like Carbamoyl phosphate synthetase, large subunit connection domain 11
HD-domain/PDEase-like HD-domain/PDEase-like 11
Dihydropteroate synthetase-like Methionine synthase activation domain-like 11
NAD(P)-binding Rossmann-fold domains Acyl-CoA N-acyltransferases (Nat) 11
Class I glutamine amidotransferase-like Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 11
Galactose-binding domain-like (Trans)glycosidases 11
Thioredoxin-like TPR-like 11
SIS domain CBS-domain pair 11
P-loop containing nucleoside triphosphate hydrolases Homodimeric domain of signal transducing histidine kinase 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Adenine nucleotide alpha hydrolases-like 11
Translation proteins PRC-barrel domain 11
Dimeric alpha+beta barrel Dimeric alpha+beta barrel 11
HprK N-terminal domain-like Isocitrate/Isopropylmalate dehydrogenase-like 11
Ribosomal protein S5 domain 2-like HSP90 C-terminal domain 11
ALDH-like Dehydroquinate synthase-like 11
FMN-linked oxidoreductases Alpha subunit of glutamate synthase, C-terminal domain 11
PTS-regulatory domain, PRD Phoshotransferase/anion transport protein 11
Zinc beta-ribbon P-loop containing nucleoside triphosphate hydrolases 11
MOSC N-terminal domain-like PK beta-barrel domain-like 11
LysM domain LysM domain 11
PYP-like sensor domain (PAS domain) PYP-like sensor domain (PAS domain) 11
YgfB-like Sec-C motif 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
P-loop containing nucleoside triphosphate hydrolases Pre-protein crosslinking domain of SecA 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) ThrRS/AlaRS common domain 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Nucleotidylyl transferase 11
PreATP-grasp domain Carbamoyl phosphate synthetase, large subunit connection domain 11
Chorismate mutase II Periplasmic binding protein-like II 11
Ribosomal protein S5 domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
2Fe-2S ferredoxin-like 4Fe-4S ferredoxins 11
Chitinase insertion domain Carbohydrate binding domain 11
lambda repressor-like DNA-binding domains Nucleotidylyl transferase 11
Protein kinase-like (PK-like) Homodimeric domain of signal transducing histidine kinase 11
Chorismate mutase II 6-phosphogluconate dehydrogenase C-terminal domain-like 11
Chorismate mutase II NAD(P)-binding Rossmann-fold domains 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase HSP90 C-terminal domain 11
TGS-like ThrRS/AlaRS common domain 11
Nitrite/Sulfite reductase N-terminal domain-like Nitrite/Sulfite reductase N-terminal domain-like 11
lambda repressor-like DNA-binding domains P-loop containing nucleoside triphosphate hydrolases 11
HSP40/DnaJ peptide-binding domain HSP40/DnaJ peptide-binding domain 11
Prokaryotic type KH domain (KH-domain type II) Prokaryotic type KH domain (KH-domain type II) 11
Tropomyosin Porins 11
Thiamin diphosphate-binding fold (THDP-binding) 4Fe-4S ferredoxins 11
Adenine nucleotide alpha hydrolases-like Rhodanese/Cell cycle control phosphatase 11
ThrRS/AlaRS common domain Class II aaRS ABD-related 11
RBP11-like subunits of RNA polymerase C-terminal domain of RNA polymerase alpha subunit 11
Elongation factor Ts (EF-Ts), dimerisation domain Elongation factor Ts (EF-Ts), dimerisation domain 11
Adenine nucleotide alpha hydrolases-like GMP synthetase C-terminal dimerisation domain 11
Ribonuclease H-like Nucleic acid-binding proteins 11
FucI/AraA N-terminal and middle domains FucI/AraA C-terminal domain-like 11
MoeA N-terminal region -like MoeA C-terminal domain-like 11
Class II aaRS and biotin synthetases GAD domain-like 11
PurM C-terminal domain-like PurM C-terminal domain-like 11
(Trans)glycosidases Putative glucosidase YicI, C-terminal domain 11
FKBP-like FKBP-like 11
Homocysteine S-methyltransferase Dihydropteroate synthetase-like 11
Acyl-CoA N-acyltransferases (Nat) Thioesterase/thiol ester dehydrase-isomerase 11
E set domains Integrin alpha N-terminal domain 11
Acetyl-CoA synthetase-like alpha/beta-Hydrolases 11
PurM C-terminal domain-like Class I glutamine amidotransferase-like 11
Rho N-terminal domain-like Nucleic acid-binding proteins 11
Ribbon-helix-helix FAD-linked oxidoreductase 11
Nucleotide-diphospho-sugar transferases PilZ domain-like 11
lambda integrase-like, N-terminal domain DNA breaking-rejoining enzymes 11
CBS-domain pair Inosine monophosphate dehydrogenase (IMPDH) 11
Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 4Fe-4S ferredoxins 11
N-acetylmuramoyl-L-alanine amidase-like PGBD-like 11
FMT C-terminal domain-like NAD(P)-binding Rossmann-fold domains 11
E set domains Carbohydrate binding domain 11
PEP carboxykinase N-terminal domain PEP carboxykinase-like 11
Glutathione synthetase ATP-binding domain-like Acyl-CoA N-acyltransferases (Nat) 11
PUA domain-like S-adenosyl-L-methionine-dependent methyltransferases 11
Ribosomal protein L7/12, oligomerisation (N-terminal) domain ClpS-like 11
PHP14-like Phospholipase D/nuclease 11
E set domains beta-Roll 11
Acetyl-CoA synthetase-like FabD/lysophospholipase-like 11
Nucleic acid-binding proteins S-adenosyl-L-methionine-dependent methyltransferases 11
PUA domain-like P-loop containing nucleoside triphosphate hydrolases 11
Cobalamin (vitamin B12)-binding domain Methionine synthase activation domain-like 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain III 11
Homocysteine S-methyltransferase Cobalamin (vitamin B12)-binding domain 11
Putative DNA-binding domain Anticodon-binding domain of PheRS 11
S-adenosyl-L-methionine-dependent methyltransferases TPR-like 11
Aldolase post-HMGL domain-like 11
Cysteine proteinases PreATP-grasp domain 11
Fic-like "Winged helix" DNA-binding domain 11
Adenine nucleotide alpha hydrolases-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Glycosyl hydrolase domain Putative glucosidase YicI, C-terminal domain 11
EspE N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 11
PIN domain-like Ribonuclease H-like 11
NagB/RpiA/CoA transferase-like D-ribose-5-phosphate isomerase (RpiA), lid domain 11
Nucleotidylyl transferase Ribosomal protein L25-like 11
4Fe-4S ferredoxins Nucleotide-binding domain 11
Phoshotransferase/anion transport protein HPr-like 11
Nucleic acid-binding proteins ArfGap/RecO-like zinc finger 11
Copper amine oxidase, domain N Amine oxidase N-terminal region 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
FabD/lysophospholipase-like PLP-dependent transferases 11
PIN domain-like DNA/RNA polymerases 11
UBA-like Elongation factor Ts (EF-Ts), dimerisation domain 11
Thioredoxin-like FAD/NAD(P)-binding domain 11
ACT-like Formyltransferase 11
"Winged helix" DNA-binding domain Iron-dependent repressor protein, dimerization domain 11
"Winged helix" DNA-binding domain LexA/Signal peptidase 11
FAD-linked oxidoreductase ALDH-like 11
Periplasmic binding protein-like II Lysozyme-like 11
Tubulin nucleotide-binding domain-like Tubulin C-terminal domain-like 11
FGAM synthase PurL, linker domain PurM C-terminal domain-like 11
E set domains E set domains 11
SIS domain UBA-like 11
P-loop containing nucleoside triphosphate hydrolases HRDC-like 11
Acetyl-CoA synthetase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 11
Prokaryotic type KH domain (KH-domain type II) Rad51 N-terminal domain-like 11
NAD(P)-binding Rossmann-fold domains Bet v1-like 11
PYP-like sensor domain (PAS domain) Homeodomain-like 11
FGAM synthase PurL, linker domain Class I glutamine amidotransferase-like 11
Thiamin diphosphate-binding fold (THDP-binding) Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 11
Adenine nucleotide alpha hydrolases-like Argininosuccinate synthetase, C-terminal domain 11
PDZ domain-like ClpP/crotonase 11
Homocysteine S-methyltransferase Methionine synthase activation domain-like 11
Class I glutamine amidotransferase-like Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain 11
Zinc beta-ribbon Prokaryotic SH3-related domain 11
MFS general substrate transporter Nucleotide-diphospho-sugar transferases 11
Chaperone J-domain HSC20 (HSCB), C-terminal oligomerisation domain 11
YjeF N-terminal domain-like Ribokinase-like 11
YhbC-like, N-terminal domain YhbC-like, C-terminal domain 11
Diaminopimelate epimerase-like Diaminopimelate epimerase-like 11
Zinc beta-ribbon "Winged helix" DNA-binding domain 11
OMPA-like OmpA-like 11
GAF domain-like GAF domain-like 11
YajQ-like YajQ-like 11
PLP-dependent transferases CoA-dependent acyltransferases 11
Chitinase insertion domain PKD domain 11
Protein kinase-like (PK-like) ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
P-loop containing nucleoside triphosphate hydrolases Prokaryotic type KH domain (KH-domain type II) 11
Isochorismatase-like hydrolases ACP-like 11
ACT-like Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 11
Nucleotidylyl transferase Nucleic acid-binding proteins 11
Carbamoyl phosphate synthetase, small subunit N-terminal domain Class I glutamine amidotransferase-like 11
Trigger factor ribosome-binding domain Triger factor/SurA peptide-binding domain-like 11
Globin-like Nucleotide cyclase 11
MFS general substrate transporter Proline/betaine transporter ProP, C-terminal cytoplasmic domain 11
Chorismate mutase II ACT-like 11
Transcription factor NusA, N-terminal domain Prokaryotic type KH domain (KH-domain type II) 11
Thiol:disulfide interchange protein DsbD, N-terminal domain (DsbD-alpha) Thioredoxin-like 11
CarD-like TRCF domain-like 11
Periplasmic binding protein-like II GlnB-like 11
PKD domain Carbohydrate binding domain 11
Glycerol-3-phosphate (1)-acyltransferase Acetyl-CoA synthetase-like 11
PreATP-grasp domain PH0987 N-terminal domain-like 11
Single hybrid motif HlyD-like secretion proteins 11
ACP-like PLP-dependent transferases 11
Homocysteine S-methyltransferase Methionine synthase domain 11
Glutathione synthetase ATP-binding domain-like Cyclophilin-like 11
P-loop containing nucleoside triphosphate hydrolases ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
beta-Galactosidase/glucuronidase domain Galactose mutarotase-like 11
P-loop containing nucleoside triphosphate hydrolases Initiation factor IF2/eIF5b, domain 3 11
Nitrite and sulphite reductase 4Fe-4S domain-like ISP domain 11
DNA clamp DNA clamp 11
beta-Galactosidase/glucuronidase domain beta-Galactosidase/glucuronidase domain 11
Adenine nucleotide alpha hydrolases-like Homodimeric domain of signal transducing histidine kinase 11
Tryptophan synthase beta subunit-like PLP-dependent enzymes ACT-like 11
(Trans)glycosidases Carbohydrate binding domain 11
ValRS/IleRS/LeuRS editing domain tRNA-binding arm 11
Hsp33 domain HSP33 redox switch-like 11
Invasin/intimin cell-adhesion fragments Invasin/intimin cell-adhesion fragments 11
PheT/TilS domain Class II aaRS and biotin synthetases 11
Nucleotidyltransferase Nucleotidyltransferase 11
C-terminal UvrC-binding domain of UvrB RuvA domain 2-like 11
GAF domain-like Homodimeric domain of signal transducing histidine kinase 11
PYP-like sensor domain (PAS domain) Histidine-containing phosphotransfer domain, HPT domain 11
Formyltransferase NAD(P)-binding Rossmann-fold domains 11
Nucleic acid-binding proteins Putative DNA-binding domain 11
PYP-like sensor domain (PAS domain) CheY-like 11
Heme-dependent catalase-like Class I glutamine amidotransferase-like 11
Translation proteins ThrRS/AlaRS common domain 11
Carbamoyl phosphate synthetase, large subunit connection domain Methylglyoxal synthase-like 11
Metallo-hydrolase/oxidoreductase Rubredoxin-like 11
Nucleotide-diphospho-sugar transferases RmlC-like cupins 11
FAD-binding/transporter-associated domain-like Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain 11
NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains 11
ACP-like FabD/lysophospholipase-like 11
RuvA domain 2-like RuvA domain 2-like 11
"Winged helix" DNA-binding domain MOP-like 11
Aspartate carbamoyltransferase, Regulatory-chain, N-terminal domain Aspartate carbamoyltransferase, Regulatory-chain, C-terminal domain 11
Glutathione synthetase ATP-binding domain-like Methylglyoxal synthase-like 11
Chaperone J-domain HSP40/DnaJ peptide-binding domain 11
NAD(P)-binding Rossmann-fold domains Glutamyl tRNA-reductase dimerization domain 11
Nudix Nudix 11
Phoshotransferase/anion transport protein Phoshotransferase/anion transport protein 11
P-loop containing nucleoside triphosphate hydrolases C-terminal UvrC-binding domain of UvrB 11
PUA domain-like Ribosomal protein S5 domain 2-like 11
Nucleotidylyl transferase tRNA-binding arm 11
PreATP-grasp domain PreATP-grasp domain 11
post-HMGL domain-like 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 11
4'-phosphopantetheinyl transferase 4'-phosphopantetheinyl transferase 11
YbaK/ProRS associated domain Class II aaRS ABD-related 11
Nqo1 FMN-binding domain-like alpha-helical ferredoxin 11
MesJ substrate recognition domain-like PheT/TilS domain 11
Nqo1 FMN-binding domain-like Nqo1 middle domain-like 11
ACP-like alpha/beta-Hydrolases 11
Class II aaRS and biotin synthetases Translation proteins 11
Aconitase B, N-terminal domain Aconitase iron-sulfur domain 11
Dihydropteroate synthetase-like Nitrite and sulphite reductase 4Fe-4S domain-like 11
Tex N-terminal region-like RuvA domain 2-like 11
PreATP-grasp domain Cyclophilin-like 11
PUA domain-like alpha/beta knot 11
Nucleotidyltransferase substrate binding subunit/domain HD-domain/PDEase-like 11
5' to 3' exonuclease, C-terminal subdomain DNA/RNA polymerases 11
Nucleic acid-binding proteins Rad51 N-terminal domain-like 11
HAMP domain-like GAF domain-like 11
Rudiment single hybrid motif PH0987 N-terminal domain-like 11
Periplasmic binding protein-like II PYP-like sensor domain (PAS domain) 11
Pili subunits GspK insert domain-like 11
PTS-regulatory domain, PRD PTS-regulatory domain, PRD 11
DNA ligase/mRNA capping enzyme, catalytic domain BRCT domain 11
Acylphosphatase/BLUF domain-like Actin-like ATPase domain 11
PurS-like PurM N-terminal domain-like 11
Ribosomal protein S5 domain 2-like DNA mismatch repair protein MutL 11
THUMP domain-like Adenine nucleotide alpha hydrolases-like 11
Ribbon-helix-helix ALDH-like 11
Lysozyme-like PKD domain 11
Methionine synthase domain Cobalamin (vitamin B12)-binding domain 11
Class I glutamine amidotransferase-like GMP synthetase C-terminal dimerisation domain 11
P-loop containing nucleoside triphosphate hydrolases Zn-binding ribosomal proteins 11
TK C-terminal domain-like Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 11
TATA-box binding protein-like DNA-glycosylase 11
alpha/beta-Hydrolases beta-Roll 11
YegP-like YegP-like 11
PheT/TilS domain Putative DNA-binding domain 11
Carbohydrate binding domain Carbohydrate binding domain 11
MgtE N-terminal domain-like CBS-domain pair 11
C-terminal effector domain of the bipartite response regulators EAL domain-like 11
Ribonuclease H-like HRDC-like 11
PLP-dependent transferases PLP-dependent transferases 11
DNA-glycosylase Nudix 11
UROD/MetE-like UROD/MetE-like 11
Dihydropteroate synthetase-like Cobalamin (vitamin B12)-binding domain 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases tRNA-binding arm 11
THUMP domain-like Rhodanese/Cell cycle control phosphatase 11
Translation initiation factor IF3, N-terminal domain Translation initiation factor IF3, C-terminal domain 11
MoeA N-terminal region -like Molybdenum cofactor biosynthesis proteins 11
Calcium-dependent phosphotriesterase Tricorn protease N-terminal domain 11
HAMP domain-like Nucleotide cyclase 11
N-terminal domain of DnaB helicase P-loop containing nucleoside triphosphate hydrolases 11
FGAM synthase PurL, linker domain PurM N-terminal domain-like 11
Glutathione synthetase ATP-binding domain-like Phosphohistidine domain 11
YdgH-like YdgH-like 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) FMN-linked oxidoreductases 11
Heme-dependent peroxidases Heme-dependent peroxidases 11
Cyclophilin-like Cyclophilin-like 11
TrmE connector domain P-loop containing nucleoside triphosphate hydrolases 11
Thiolase-like CoA-dependent acyltransferases 11
Succinyl-CoA synthetase domains Acyl-CoA N-acyltransferases (Nat) 11
Amine oxidase N-terminal region Amine oxidase N-terminal region 11
Sensory domain-like Sporulation response regulatory protein Spo0B 11
Galactose mutarotase-like Six-hairpin glycosidases 11
Galactose-binding domain-like beta-Galactosidase/glucuronidase domain 11
Nqo1 middle domain-like Nqo1C-terminal domain-like 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) Translation proteins 11
Nitrite and sulphite reductase 4Fe-4S domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 11
DNA repair protein MutS, domain III P-loop containing nucleoside triphosphate hydrolases 11
Cytidine deaminase-like Dihydrofolate reductase-like 11
E set domains alpha/beta-Hydrolases 11
P-loop containing nucleoside triphosphate hydrolases TRCF domain-like 11
Thioesterase/thiol ester dehydrase-isomerase Thioesterase/thiol ester dehydrase-isomerase 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Alpha subunit of glutamate synthase, C-terminal domain 11
RuvA domain 2-like DNA helicase RuvA subunit, C-terminal domain 11
PurS-like PurM C-terminal domain-like 11
Probable ACP-binding domain of malonyl-CoA ACP transacylase CoA-dependent acyltransferases 11
EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain "Winged helix" DNA-binding domain 11
DNA repair protein MutS, domain II DNA repair protein MutS, domain III 11
L9 N-domain-like Ribosomal protein L9 C-domain 11
MFS general substrate transporter PilZ domain-like 11
Prokaryotic type KH domain (KH-domain type II) Ribosomal protein S3 C-terminal domain 11
Sporulation response regulatory protein Spo0B ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Cyclophilin-like Single hybrid motif 11
Lysozyme-like LysM domain 11
Thiolase-like PLP-dependent transferases 11
Nucleic acid-binding proteins BRCT domain 11
Class II aaRS and biotin synthetases SufE/NifU 11
Flavoproteins Riboflavin synthase domain-like 11
Acetyl-CoA synthetase-like PLP-dependent transferases 11
PreATP-grasp domain Methylglyoxal synthase-like 11
Acetyl-CoA synthetase-like Thiolase-like 11

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