SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.


Domain combination pairs in Pichia pastoris GS115

All pairs of domain combinations at the superfamily level are listed here.
The identification of domain pairs does not account for the possibility of non-contiguous domains. Inserted, or interlaced, domains are seen as having a simple pair ordering.

  • For a list of unique full length architectures for this genome click here (can be slow).
Adjacent domain pairs graph

Graph of adjacent domain pairs.


Add or remove domain pairs

The links below permit the addition or removal of specific sets of domain combination pairs.


Jump to [ Top of page · Add/remove domain pairs · Domain combination pairs ]

Add or remove genomes

Change the list of genome two-letter codes in the 'Include genomes' box to include domain-pairs from those genomes.
Change the list of genomes in the 'Exclude genomes' box to exclude domain-pairs from those genomes.
List of all two-letter genome codes.

Add or remove genomes:
Include genomes:
Exclude genomes:


Jump to [ Top of page · Add/remove domain pairs · Add/remove genomes ]

Domain combination pairs

927 domain combination pairs.
Click on a column heading to sort that column, or the 'View' button to see domain architetures for that domain pair combination.

Superfamily (N) Superfamily (C) Number of occurrances Number unique
P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases 7432
Actin-like ATPase domain Actin-like ATPase domain 3010
RNA-binding domain, RBD RNA-binding domain, RBD 1812
ARM repeat ARM repeat 1711
Calcium ATPase, transduction domain A Calcium ATPase, transmembrane domain M 135
TPR-like TPR-like 1310
GroES-like NAD(P)-binding Rossmann-fold domains 133
Calcium ATPase, transmembrane domain M HAD-like 135
Calcium ATPase, transduction domain A HAD-like 135
FAD/NAD(P)-binding domain FAD/NAD(P)-binding domain 125
P-loop containing nucleoside triphosphate hydrolases Translation proteins 129
Metal cation-transporting ATPase, ATP-binding domain N Calcium ATPase, transmembrane domain M 113
ABC transporter transmembrane region P-loop containing nucleoside triphosphate hydrolases 113
Metal cation-transporting ATPase, ATP-binding domain N HAD-like 113
Calcium ATPase, transduction domain A Metal cation-transporting ATPase, ATP-binding domain N 113
Homeodomain-like Homeodomain-like 107
GroEL-intermediate domain like GroEL apical domain-like 92
Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) 94
Ypt/Rab-GAP domain of gyp1p Ypt/Rab-GAP domain of gyp1p 95
Nucleotidylyl transferase Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 97
GroEL equatorial domain-like GroEL-intermediate domain like 92
FAD/NAD(P)-binding domain FAD-linked reductases, C-terminal domain 94
GroEL equatorial domain-like GroEL apical domain-like 92
WD40 repeat-like WD40 repeat-like 96
Riboflavin synthase domain-like Ferredoxin reductase-like, C-terminal NADP-linked domain 86
beta-beta-alpha zinc fingers beta-beta-alpha zinc fingers 86
PreATP-grasp domain Glutathione synthetase ATP-binding domain-like 88
NAD(P)-binding Rossmann-fold domains Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 84
Actin-like ATPase domain Heat shock protein 70kD (HSP70), peptide-binding domain 73
NAD(P)-binding Rossmann-fold domains 6-phosphogluconate dehydrogenase C-terminal domain-like 73
Cyclin-like Cyclin-like 75
Nucleic acid-binding proteins P-loop containing nucleoside triphosphate hydrolases 72
Thioredoxin-like GST C-terminal domain-like 72
LuxS/MPP-like metallohydrolase LuxS/MPP-like metallohydrolase 74
ABC transporter transmembrane region ABC transporter transmembrane region 72
Protein kinase-like (PK-like) ARM repeat 77
Formate/glycerate dehydrogenase catalytic domain-like NAD(P)-binding Rossmann-fold domains 63
Aminoacid dehydrogenase-like, N-terminal domain NAD(P)-binding Rossmann-fold domains 66
Translation proteins EF-G C-terminal domain-like 65
P-loop containing nucleoside triphosphate hydrolases post-AAA+ oligomerization domain-like 63
P-loop containing nucleoside triphosphate hydrolases Ribosomal protein S5 domain 2-like 65
P-loop containing nucleoside triphosphate hydrolases EF-G C-terminal domain-like 65
EF-G C-terminal domain-like EF-G C-terminal domain-like 65
Nucleic acid-binding proteins Class II aaRS and biotin synthetases 63
Class II aaRS and biotin synthetases Class II aaRS ABD-related 65
Actin-like ATPase domain Heat shock protein 70kD (HSP70), C-terminal subdomain 62
Thiamin diphosphate-binding fold (THDP-binding) DHS-like NAD/FAD-binding domain 51
ValRS/IleRS/LeuRS editing domain Nucleotidylyl transferase 53
L domain-like L domain-like 54
ValRS/IleRS/LeuRS editing domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 53
Thiolase-like Thiolase-like 52
Heat shock protein 70kD (HSP70), peptide-binding domain Heat shock protein 70kD (HSP70), C-terminal subdomain 51
Glutathione synthetase ATP-binding domain-like Rudiment single hybrid motif 55
HSP40/DnaJ peptide-binding domain HSP40/DnaJ peptide-binding domain 54
PreATP-grasp domain Rudiment single hybrid motif 55
Leukotriene A4 hydrolase N-terminal domain Metalloproteases ("zincins"), catalytic domain 53
SNARE-like Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor 53
TK C-terminal domain-like Thiamin diphosphate-binding fold (THDP-binding) 54
CRAL/TRIO N-terminal domain CRAL/TRIO domain 53
Chaperone J-domain HSP40/DnaJ peptide-binding domain 54
Ribonuclease H-like DNA/RNA polymerases 52
BAR/IMD domain-like SH3-domain 43
Creatinase/prolidase N-terminal domain Creatinase/aminopeptidase 44
L domain-like RING/U-box 44
"Winged helix" DNA-binding domain "Winged helix" DNA-binding domain 44
Translation proteins Ribosomal protein S5 domain 2-like 43
DNA repair protein MutS, domain III P-loop containing nucleoside triphosphate hydrolases 44
Translation proteins EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 42
MFS general substrate transporter MFS general substrate transporter 42
P-loop containing nucleoside triphosphate hydrolases TGS-like 41
Zn-finger domain of Sec23/24 Helical domain of Sec23/24 42
EF-G C-terminal domain-like Ribosomal protein S5 domain 2-like 43
SH3-domain SH3-domain 44
beta-sandwich domain of Sec23/24 Helical domain of Sec23/24 42
CCCH zinc finger CCCH zinc finger 43
Helical domain of Sec23/24 C-terminal, gelsolin-like domain of Sec23/24 42
alpha-ketoacid dehydrogenase kinase, N-terminal domain ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 43
Thioredoxin-like Thioredoxin-like 43
Zn-finger domain of Sec23/24 C-terminal, gelsolin-like domain of Sec23/24 42
Tubulin nucleotide-binding domain-like Tubulin C-terminal domain-like 41
Ribosomal protein S5 domain 2-like Ribonuclease PH domain 2-like 41
Ubiquitin-like UBA-like 44
Zn-finger domain of Sec23/24 vWA-like 42
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Ribosomal protein S5 domain 2-like 44
Cullin homology domain "Winged helix" DNA-binding domain 42
Chaperone J-domain DnaJ/Hsp40 cysteine-rich domain 43
P-loop containing nucleoside triphosphate hydrolases EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 42
P-loop containing nucleoside triphosphate hydrolases Phosphoglycerate mutase-like 43
PA domain Zn-dependent exopeptidases 43
Nucleic acid-binding proteins Translation proteins SH3-like domain 43
beta-sandwich domain of Sec23/24 C-terminal, gelsolin-like domain of Sec23/24 42
P-loop containing nucleoside triphosphate hydrolases RING/U-box 41
vWA-like C-terminal, gelsolin-like domain of Sec23/24 42
DnaJ/Hsp40 cysteine-rich domain HSP40/DnaJ peptide-binding domain 43
Aconitase iron-sulfur domain LeuD/IlvD-like 41
P-loop containing nucleoside triphosphate hydrolases Smc hinge domain 42
vWA-like Helical domain of Sec23/24 42
Thioesterase/thiol ester dehydrase-isomerase Thioesterase/thiol ester dehydrase-isomerase 44
Nucleic acid-binding proteins Nucleic acid-binding proteins 44
CorA soluble domain-like Magnesium transport protein CorA, transmembrane region 42
Multidrug resistance efflux transporter EmrE Multidrug resistance efflux transporter EmrE 42
beta-sandwich domain of Sec23/24 vWA-like 42
beta-sandwich domain of Sec23/24 Zn-finger domain of Sec23/24 42
Quinoprotein alcohol dehydrogenase-like WD40 repeat-like 32
HCP-like HCP-like 32
Cullin repeat-like Cullin homology domain 31
Phosphoglucomutase, first 3 domains Phosphoglucomutase, C-terminal domain 33
CoA-dependent acyltransferases CoA-dependent acyltransferases 33
P-loop containing nucleoside triphosphate hydrolases "Winged helix" DNA-binding domain 33
Ribosomal protein L6 Ribosomal protein L6 31
N-terminal domain of alpha and beta subunits of F1 ATP synthase P-loop containing nucleoside triphosphate hydrolases 33
Thioredoxin-like Ubiquitin-like 33
ENTH/VHS domain GAT-like domain 33
Amine oxidase N-terminal region Amine oxidase catalytic domain 32
ARM repeat WD40 repeat-like 33
PreATP-grasp domain Single hybrid motif 33
C2 domain (Calcium/lipid-binding domain, CaLB) Protein kinase-like (PK-like) 33
PriA/YqbF domain GINS helical bundle-like 32
PIN domain-like 5' to 3' exonuclease, C-terminal subdomain 33
Ribosomal protein S5 domain 2-like GHMP Kinase, C-terminal domain 31
ARM repeat P-loop containing nucleoside triphosphate hydrolases 33
Cdc48 domain 2-like P-loop containing nucleoside triphosphate hydrolases 33
t-snare proteins SNARE fusion complex 32
N-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase 33
Rudiment single hybrid motif Single hybrid motif 33
Phosphoglucomutase, first 3 domains Phosphoglucomutase, first 3 domains 33
RING/U-box RING/U-box 33
P-loop containing nucleoside triphosphate hydrolases FtsH protease domain-like 31
EF-hand EF-hand 33
Zn-dependent exopeptidases Transferrin receptor-like dimerisation domain 32
Sec63 N-terminal domain-like E set domains 33
PA domain Transferrin receptor-like dimerisation domain 32
BAR/IMD domain-like GTPase activation domain, GAP 33
FYVE/PHD zinc finger Clavaminate synthase-like 33
P-loop containing nucleoside triphosphate hydrolases Bromodomain 33
Glutathione synthetase ATP-binding domain-like Single hybrid motif 33
ADC-like P-loop containing nucleoside triphosphate hydrolases 33
CBS-domain pair CBS-domain pair 33
Phospholipase D/nuclease Phospholipase D/nuclease 33
ARM repeat Clathrin adaptor appendage domain 32
DNA repair protein MutS, domain I DNA repair protein MutS, domain III 33
cAMP-binding domain-like cAMP-binding domain-like 33
DNA ligase/mRNA capping enzyme, catalytic domain Nucleic acid-binding proteins 33
Bromodomain Bromodomain 33
Amine oxidase N-terminal region Amine oxidase N-terminal region 32
P-loop containing nucleoside triphosphate hydrolases C-terminal domain of alpha and beta subunits of F1 ATP synthase 33
FYVE/PHD zinc finger FYVE/PHD zinc finger 33
C2 domain (Calcium/lipid-binding domain, CaLB) C2 domain (Calcium/lipid-binding domain, CaLB) 33
Cullin repeat-like "Winged helix" DNA-binding domain 31
RING/U-box Cysteine proteinases 33
ADC-like Cdc48 domain 2-like 33
DNA repair protein MutS, domain I P-loop containing nucleoside triphosphate hydrolases 33
Enolase N-terminal domain-like Enolase C-terminal domain-like 31
R1 subunit of ribonucleotide reductase, N-terminal domain PFL-like glycyl radical enzymes 21
NagB/RpiA/CoA transferase-like D-ribose-5-phosphate isomerase (RpiA), lid domain 21
P-loop containing nucleoside triphosphate hydrolases Initiation factor IF2/eIF5b, domain 3 22
DNA/RNA polymerases Lesion bypass DNA polymerase (Y-family), little finger domain 22
Eukaryotic type KH-domain (KH-domain type I) Eukaryotic type KH-domain (KH-domain type I) 22
vWA-like SPOC domain-like 22
DNA repair protein MutS, domain I DNA repair protein MutS, domain II 22
Ribosomal L11/L12e N-terminal domain Ribosomal protein L11, C-terminal domain 21
PurM N-terminal domain-like PurM C-terminal domain-like 22
"Winged helix" DNA-binding domain E set domains 22
Translation initiation factor 2 beta, aIF2beta, N-terminal domain Zinc-binding domain of translation initiation factor 2 beta 22
Rhodanese/Cell cycle control phosphatase (Phosphotyrosine protein) phosphatases II 21
P-loop containing nucleoside triphosphate hydrolases HAND domain of the nucleosome remodeling ATPase ISWI 22
Zn-dependent exopeptidases Bacterial exopeptidase dimerisation domain 22
tRNA-binding arm Class II aaRS and biotin synthetases 21
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 22
Cap-Gly domain Ubiquitin-like 22
HMA, heavy metal-associated domain HMA, heavy metal-associated domain 22
PUA domain-like P-loop containing nucleoside triphosphate hydrolases 22
Insert subdomain of RNA polymerase alpha subunit RBP11-like subunits of RNA polymerase 22
P-loop containing nucleoside triphosphate hydrolases E set domains 22
Rhodanese/Cell cycle control phosphatase Cysteine proteinases 22
FAD/NAD(P)-binding domain FAD/NAD-linked reductases, dimerisation (C-terminal) domain 22
UBA-like UBC-like 22
Single hybrid motif CoA-dependent acyltransferases 22
Glutathione synthetase ATP-binding domain-like Glutathione synthetase ATP-binding domain-like 22
SH3-domain Ras GEF 22
P-loop containing nucleoside triphosphate hydrolases Homeodomain-like 22
PreATP-grasp domain PreATP-grasp domain 22
Tetrahydrobiopterin biosynthesis enzymes-like Tetrahydrobiopterin biosynthesis enzymes-like 22
Cellulose-binding domain Cellulose-binding domain 22
Carbamoyl phosphate synthetase, small subunit N-terminal domain Class I glutamine amidotransferase-like 22
Class I glutamine amidotransferase-like Ribulose-phoshate binding barrel 21
P-loop containing nucleoside triphosphate hydrolases NAD(P)-binding Rossmann-fold domains 22
DNA repair protein MutS, domain II P-loop containing nucleoside triphosphate hydrolases 22
ARM repeat Subdomain of clathrin and coatomer appendage domain 21
DBL homology domain (DH-domain) PH domain-like 22
Initiation factor IF2/eIF5b, domain 3 Translation proteins 22
NAD(P)-binding Rossmann-fold domains LDH C-terminal domain-like 21
N-terminal, heterodimerisation domain of RBP7 (RpoE) Nucleic acid-binding proteins 21
HMA, heavy metal-associated domain HAD-like 22
Homodimeric domain of signal transducing histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 22
SMAD/FHA domain "Winged helix" DNA-binding domain 22
F-box domain WD40 repeat-like 22
Sec63 N-terminal domain-like Sec63 N-terminal domain-like 22
Glutathione synthetase ATP-binding domain-like Carbamoyl phosphate synthetase, large subunit connection domain 22
F-box domain RNI-like 22
Aminopeptidase/glucanase lid domain Zn-dependent exopeptidases 21
RNase III domain-like dsRNA-binding domain-like 22
ThrRS/AlaRS common domain Class II aaRS and biotin synthetases 22
Protein kinase-like (PK-like) KA1-like 22
Flavoproteins Ferredoxin reductase-like, C-terminal NADP-linked domain 22
Nucleotide-binding domain FAD-linked reductases, C-terminal domain 21
Nucleotidylyl transferase Ribosomal protein L25-like 22
Restriction endonuclease-like RuvA domain 2-like 21
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase DNA mismatch repair protein MutL 22
Cupredoxins Cupredoxins 21
Translation proteins ThrRS/AlaRS common domain 22
PreATP-grasp domain Carbamoyl phosphate synthetase, large subunit connection domain 22
"Winged helix" DNA-binding domain Sec63 N-terminal domain-like 22
HMA, heavy metal-associated domain Calcium ATPase, transmembrane domain M 22
Glutathione synthetase ATP-binding domain-like Methylglyoxal synthase-like 22
WW domain FF domain 22
Carbamoyl phosphate synthetase, large subunit connection domain Methylglyoxal synthase-like 22
Hypothetical protein SAV1430 Fe-S cluster assembly (FSCA) domain-like 22
Nucleic acid-binding proteins Eukaryotic type KH-domain (KH-domain type I) 22
SNARE-like SNARE fusion complex 21
P-loop containing nucleoside triphosphate hydrolases Sec63 N-terminal domain-like 22
FAD-binding/transporter-associated domain-like FAD-linked oxidases, C-terminal domain 21
Single hybrid motif Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 22
Cyclophilin-like TPR-like 21
Flavoproteins Riboflavin synthase domain-like 22
Translational machinery components L30e-like 22
DNA repair protein MutS, domain II DNA repair protein MutS, domain III 22
HAND domain of the nucleosome remodeling ATPase ISWI Homeodomain-like 22
EF-hand Mitochondrial carrier 22
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheY-like 22
(Phosphotyrosine protein) phosphatases II (Phosphotyrosine protein) phosphatases II 22
Transcription factor IIA (TFIIA), alpha-helical domain Transcription factor IIA (TFIIA), beta-barrel domain 22
ARM repeat Formin homology 2 domain (FH2 domain) 22
PRTase-like PRTase-like 22
Cation efflux protein transmembrane domain-like Cation efflux protein cytoplasmic domain-like 22
HMA, heavy metal-associated domain Calcium ATPase, transduction domain A 22
SMAD/FHA domain Protein kinase-like (PK-like) 22
Ankyrin repeat PLC-like phosphodiesterases 21
Metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases 22
DNA-binding domain of Mlu1-box binding protein MBP1 Ankyrin repeat 21
DPP6 N-terminal domain-like alpha/beta-Hydrolases 21
ARM repeat Hect, E3 ligase catalytic domain 21
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Adenine nucleotide alpha hydrolases-like 22
Ribokinase-like Heme oxygenase-like 21
Clathrin adaptor appendage domain Subdomain of clathrin and coatomer appendage domain 21
dsRNA-binding domain-like Ribosomal protein S5 domain 2-like 21
TPR-like "Winged helix" DNA-binding domain 21
P-loop containing nucleoside triphosphate hydrolases Aminoacid dehydrogenase-like, N-terminal domain 22
Phosphofructokinase Phosphofructokinase 22
Protease propeptides/inhibitors Subtilisin-like 21
Domain of the SRP/SRP receptor G-proteins P-loop containing nucleoside triphosphate hydrolases 22
PreATP-grasp domain Methylglyoxal synthase-like 22
Calponin-homology domain, CH-domain EF-hand 22
BRCT domain BRCT domain 22
MurD-like peptide ligases, catalytic domain MurD-like peptide ligases, peptide-binding domain 22
Fe,Mn superoxide dismutase (SOD), N-terminal domain Fe,Mn superoxide dismutase (SOD), C-terminal domain 22
WW domain WW domain 22
Homodimeric domain of signal transducing histidine kinase CheY-like 22
RING/U-box FYVE/PHD zinc finger 22
Creatinase/aminopeptidase "Winged helix" DNA-binding domain 22
BRCT domain Homeodomain-like 21
Nucleotidyltransferase PAP/OAS1 substrate-binding domain 22
Aldolase post-HMGL domain-like 22
Clc chloride channel CBS-domain pair 22
ACT-like ACT-like 22
Zinc beta-ribbon Cyclin-like 22
Nicotinate/Quinolinate PRTase N-terminal domain-like Nicotinate/Quinolinate PRTase C-terminal domain-like 21
Retrovirus zinc finger-like domains Retrovirus zinc finger-like domains 22
EF-hand C2 domain (Calcium/lipid-binding domain, CaLB) 11
(Trans)glycosidases Six-hairpin glycosidases 11
Rudiment single hybrid motif PH0987 N-terminal domain-like 11
DNA polymerase beta, N-terminal domain-like PsbU/PolX domain-like 11
HR1 repeat Cysteine-rich domain 11
SH3-domain PH domain-like 11
Pre-PUA domain PUA domain-like 11
Calponin-homology domain, CH-domain RGC domain-like 11
Globin-like Riboflavin synthase domain-like 11
RNA-binding domain, RBD beta-sandwich domain of Sec23/24 11
EF-hand PLC-like phosphodiesterases 11
Type II DNA topoisomerase Ribosomal protein L30p/L7e 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Type II DNA topoisomerase 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Nucleotidylyl transferase 11
Carbamate kinase-like Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) SIS domain 11
Glycoside hydrolase/deacetylase Galactose mutarotase-like 11
NAD(P)-binding Rossmann-fold domains ACT-like 11
Nucleotidyltransferase PAP/Archaeal CCA-adding enzyme, C-terminal domain 11
Protein kinase-like (PK-like) CheY-like 11
SET domain SET domain 11
NAD(P)-binding Rossmann-fold domains Thiolase-like 11
(Trans)glycosidases Glycosyl hydrolase domain 11
Chaperone J-domain E set domains 11
P-loop containing nucleoside triphosphate hydrolases PRTase-like 11
DNA clamp DNA clamp 11
Putative DNA-binding domain PheT/TilS domain 11
Rudiment single hybrid motif PurM N-terminal domain-like 11
Protein kinase-like (PK-like) Protein kinase-like (PK-like) 11
Ankyrin repeat POZ domain 11
ENTH/VHS domain RNA-binding domain, RBD 11
TPR-like RNI-like 11
Class I glutamine amidotransferase-like ADC synthase 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) FMN-linked oxidoreductases 11
SPOC domain-like SAP domain 11
Actin depolymerizing proteins Actin depolymerizing proteins 11
BAR/IMD domain-like PH domain-like 11
PreATP-grasp domain Cyclophilin-like 11
PreATP-grasp domain Metallo-dependent hydrolases 11
SNARE-like P-loop containing nucleoside triphosphate hydrolases 11
Carbamoyl phosphate synthetase, small subunit N-terminal domain Methylglyoxal synthase-like 11
BRCT domain DNA/RNA polymerases 11
Dom34/Pelota N-terminal domain-like Translational machinery components 11
RuvA domain 2-like Nucleic acid-binding proteins 11
Aldolase NAD(P)-binding Rossmann-fold domains 11
RNA-binding domain, RBD SET domain 11
Class I glutamine amidotransferase-like Adenine nucleotide alpha hydrolases-like 11
HR1 repeat HR1 repeat 11
Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain 11
ThrRS/AlaRS common domain Class II aaRS ABD-related 11
Alpha subunit of glutamate synthase, C-terminal domain alpha-helical ferredoxin 11
RNI-like Ubiquitin-like 11
UBA-like SMR domain-like 11
Class II aaRS and biotin synthetases Translation proteins 11
Dehydroquinate synthase-like Aminoacid dehydrogenase-like, N-terminal domain 11
TATA-box binding protein-like DNA-glycosylase 11
TRAF domain-like Cysteine proteinases 11
Glutathione synthetase ATP-binding domain-like Metallo-dependent hydrolases 11
Ubiquitin-like Acid proteases 11
Rudiment single hybrid motif N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) 11
Trypsin-like serine proteases Trypsin-like serine proteases 11
L domain-like PP2C-like 11
PX domain PH domain-like 11
PUA domain-like Ribosomal protein S5 domain 2-like 11
BAR/IMD domain-like "Winged helix" DNA-binding domain 11
Radical SAM enzymes Acyl-CoA N-acyltransferases (Nat) 11
Acyl-CoA N-acyltransferases (Nat) Acyl-CoA N-acyltransferases (Nat) 11
FabD/lysophospholipase-like NAD(P)-binding Rossmann-fold domains 11
FYSH domain Hypothetical protein AF0491, middle domain 11
Nitrite/Sulfite reductase N-terminal domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 11
Ribonuclease H-like Nucleic acid-binding proteins 11
Nucleotidylyl transferase Nucleotidylyl transferase 11
L domain-like RNI-like 11
ENTH/VHS domain Clathrin adaptor appendage domain 11
GST C-terminal domain-like Nucleotidylyl transferase 11
all-alpha NTP pyrophosphatases ALDH-like 11
Amidase signature (AS) enzymes Single hybrid motif 11
MIT domain P-loop containing nucleoside triphosphate hydrolases 11
PLP-binding barrel Alanine racemase C-terminal domain-like 11
Flavoproteins Nitrite and sulphite reductase 4Fe-4S domain-like 11
Methyl-accepting chemotaxis protein (MCP) signaling domain Methyl-accepting chemotaxis protein (MCP) signaling domain 11
TPR-like RNA-binding domain, RBD 11
Acid proteases UBA-like 11
FAS1 domain FAS1 domain 11
P-loop containing nucleoside triphosphate hydrolases Cytidine deaminase-like 11
Class II aaRS and biotin synthetases C-terminal domain of ProRS 11
DUSP-like Cysteine proteinases 11
ClpS-like "Winged helix" DNA-binding domain 11
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 11
dsRNA-binding domain-like UBA-like 11
FAD-binding/transporter-associated domain-like Molybdenum cofactor-binding domain 11
Dimerization-anchoring domain of cAMP-dependent PK regulatory subunit cAMP-binding domain-like 11
WD40 repeat-like DPP6 N-terminal domain-like 11
PurM N-terminal domain-like PurM N-terminal domain-like 11
HisI-like ALDH-like 11
Concanavalin A-like lectins/glucanases Concanavalin A-like lectins/glucanases 11
Carbamoyl phosphate synthetase, large subunit connection domain Aspartate/ornithine carbamoyltransferase 11
Tetrahydrobiopterin biosynthesis enzymes-like 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK 11
Activating enzymes of the ubiquitin-like proteins Activating enzymes of the ubiquitin-like proteins 11
alpha-helical ferredoxin Nucleotide-binding domain 11
L domain-like UBA-like 11
6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK Dihydropteroate synthetase-like 11
Carbamoyl phosphate synthetase, small subunit N-terminal domain PreATP-grasp domain 11
Ubiquitin-like Zn-binding ribosomal proteins 11
C2 domain (Calcium/lipid-binding domain, CaLB) ARM repeat 11
Acyl-CoA dehydrogenase C-terminal domain-like Acyl-CoA dehydrogenase C-terminal domain-like 11
Glutathione synthetase ATP-binding domain-like Phosphoglycerate mutase-like 11
Translation initiation factor 2 beta, aIF2beta, N-terminal domain ARM repeat 11
Metallo-dependent phosphatases 5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain 11
TPR-like HSP20-like chaperones 11
Histone-fold ARM repeat 11
PH domain-like WD40 repeat-like 11
L domain-like Nucleotide cyclase 11
2Fe-2S ferredoxin-like CO dehydrogenase ISP C-domain like 11
Ribosomal protein S5 domain 2-like HSP90 C-terminal domain 11
Amidase signature (AS) enzymes PreATP-grasp domain 11
FF domain FF domain 11
Rudiment single hybrid motif PurM C-terminal domain-like 11
WD40 repeat-like Calcium-dependent phosphotriesterase 11
Galactose mutarotase-like Six-hairpin glycosidases 11
ATP-dependent DNA ligase DNA-binding domain DNA ligase/mRNA capping enzyme, catalytic domain 11
Zinc beta-ribbon Zinc beta-ribbon 11
SWIB/MDM2 domain SWIB/MDM2 domain 11
FMN-linked oxidoreductases alpha-helical ferredoxin 11
Class I glutamine amidotransferase-like GMP synthetase C-terminal dimerisation domain 11
Glutathione synthetase ATP-binding domain-like Succinyl-CoA synthetase domains 11
SAP domain RING/U-box 11
EPT/RTPC-like P-loop containing nucleoside triphosphate hydrolases 11
Regulator of G-protein signaling, RGS PX domain 11
WD40 repeat-like Cysteine proteinases 11
Putative DNA-binding domain Class II aaRS and biotin synthetases 11
CoA-dependent acyltransferases ACP-like 11
HAD-like BRCT domain 11
Nucleotidyltransferase Poly A polymerase C-terminal region-like 11
Glutathione synthetase ATP-binding domain-like Aldolase 11
Putative DNA-binding domain Putative DNA-binding domain 11
F-box domain Quinoprotein alcohol dehydrogenase-like 11
RNA-binding domain, RBD DPP6 N-terminal domain-like 11
Carbon-nitrogen hydrolase Adenine nucleotide alpha hydrolases-like 11
Tricorn protease domain 2 WD40 repeat-like 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Ribosomal protein L30p/L7e 11
Nucleotidylyl transferase An anticodon-binding domain of class I aminoacyl-tRNA synthetases 11
Glutathione synthetase ATP-binding domain-like PurM N-terminal domain-like 11
P-loop containing nucleoside triphosphate hydrolases Hypothetical protein YjiA, C-terminal domain 11
Nitrite/Sulfite reductase N-terminal domain-like Nitrite/Sulfite reductase N-terminal domain-like 11
Cysteine proteinases UBA-like 11
Class II aaRS and biotin synthetases Anticodon-binding domain of PheRS 11
Cap-Gly domain RNI-like 11
Retrovirus zinc finger-like domains RING/U-box 11
Actin-like ATPase domain CV3147-like 11
UROD/MetE-like UROD/MetE-like 11
FabD/lysophospholipase-like Thiolase-like 11
FGAM synthase PurL, linker domain Class I glutamine amidotransferase-like 11
Methyl-accepting chemotaxis protein (MCP) signaling domain Homodimeric domain of signal transducing histidine kinase 11
Nucleic acid-binding proteins TPR-like 11
Inhibitor of apoptosis (IAP) repeat Inhibitor of apoptosis (IAP) repeat 11
P-loop containing nucleoside triphosphate hydrolases vWA-like 11
Carbamoyl phosphate synthetase, small subunit N-terminal domain Carbamoyl phosphate synthetase, large subunit connection domain 11
Nucleotide-diphospho-sugar transferases Trimeric LpxA-like enzymes 11
4Fe-4S ferredoxins Formate dehydrogenase/DMSO reductase, domains 1-3 11
VPS9 domain Ankyrin repeat 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
Dehydroquinate synthase-like P-loop containing nucleoside triphosphate hydrolases 11
Leucine zipper domain YAP1 redox domain 11
Carbamoyl phosphate synthetase, small subunit N-terminal domain Aspartate/ornithine carbamoyltransferase 11
HLH, helix-loop-helix DNA-binding domain beta-sandwich domain of Sec23/24 11
PurS-like Class I glutamine amidotransferase-like 11
Cysteine-rich domain Protein kinase-like (PK-like) 11
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 11
PAH2 domain PAH2 domain 11
BRCT domain Nucleotidyltransferase 11
NTF2-like UBA-like 11
HMA, heavy metal-associated domain Cu,Zn superoxide dismutase-like 11
RING/U-box Homeodomain-like 11
2Fe-2S ferredoxin-like Formate dehydrogenase/DMSO reductase, domains 1-3 11
Class I glutamine amidotransferase-like Aspartate/ornithine carbamoyltransferase 11
Cyclophilin-like Single hybrid motif 11
PH domain-like (Phosphotyrosine protein) phosphatases II 11
Methylglyoxal synthase-like Cytidine deaminase-like 11
Concanavalin A-like lectins/glucanases P-domain of calnexin/calreticulin 11
BRCT domain PsbU/PolX domain-like 11
RuvA domain 2-like RuvA domain 2-like 11
Chaperone J-domain HSC20 (HSCB), C-terminal oligomerisation domain 11
Dehydroquinate synthase-like NAD(P)-binding Rossmann-fold domains 11
DNA ligase/mRNA capping enzyme, catalytic domain BRCT domain 11
"Winged helix" DNA-binding domain Regulator of G-protein signaling, RGS 11
Domain of the SRP/SRP receptor G-proteins Signal peptide-binding domain 11
HAD-like HAD-like 11
Acyl-CoA N-acyltransferases (Nat) Bromodomain 11
N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 Translational machinery components 11
Nqo1 middle domain-like Nqo1C-terminal domain-like 11
SWIB/MDM2 domain eIF1-like 11
Terpenoid cyclases/Protein prenyltransferases Terpenoid cyclases/Protein prenyltransferases 11
Glutathione synthetase ATP-binding domain-like post-HMGL domain-like 11
CoA-dependent acyltransferases NAD(P)-binding Rossmann-fold domains 11
Concanavalin A-like lectins/glucanases PH domain-like 11
Nucleotidylyl transferase P-loop containing nucleoside triphosphate hydrolases 11
Class I glutamine amidotransferase-like Metallo-dependent hydrolases 11
Protein kinase-like (PK-like) Class II aaRS and biotin synthetases 11
Galactose mutarotase-like Glycosyl hydrolase domain 11
UBC-like Ribosomal protein S5 domain 2-like 11
NAD-binding domain of HMG-CoA reductase Substrate-binding domain of HMG-CoA reductase 11
Cyclophilin-like PH0987 N-terminal domain-like 11
post-HMGL domain-like 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 11
P-loop containing nucleoside triphosphate hydrolases SH3-domain 11
Staphylococcal nuclease Tudor/PWWP/MBT 11
CHY zinc finger-like Zinc hairpin stack 11
Single hybrid motif ClpP/crotonase 11
Concanavalin A-like lectins/glucanases WD40 repeat-like 11
Zn2/Cys6 DNA-binding domain Leucine zipper domain 11
S-adenosyl-L-methionine-dependent methyltransferases Galactose oxidase, central domain 11
vWA-like Cysteine-rich domain 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) alpha-helical ferredoxin 11
Metalloproteases ("zincins"), catalytic domain ARM repeat 11
BRCT domain post-AAA+ oligomerization domain-like 11
Flavoproteins Nitrite/Sulfite reductase N-terminal domain-like 11
Protein kinase-like (PK-like) Polo-box domain 11
Obg GTP-binding protein N-terminal domain P-loop containing nucleoside triphosphate hydrolases 11
Pseudouridine synthase Cytidine deaminase-like 11
FYVE/PHD zinc finger Homeodomain-like 11
Eukaryotic initiation factor 4f subunit eIF4g, eIF4e-binding domain ARM repeat 11
Glutamine synthetase/guanido kinase GatB/YqeY motif 11
SMAD/FHA domain SMAD/FHA domain 11
Dehydroquinate synthase-like Aldolase 11
DNA-binding domain of Mlu1-box binding protein MBP1 DNA-binding domain of Mlu1-box binding protein MBP1 11
YbaK/ProRS associated domain Class II aaRS ABD-related 11
Thioredoxin-like ERP29 C domain-like 11
Thioredoxin-like eEF1-gamma domain 11
E set domains AMPKBI-like 11
6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 11
FabD/lysophospholipase-like 4'-phosphopantetheinyl transferase 11
SNARE-like Domain of the SRP/SRP receptor G-proteins 11
Thiamin diphosphate-binding fold (THDP-binding) Nitrite/Sulfite reductase N-terminal domain-like 11
C2 domain (Calcium/lipid-binding domain, CaLB) Cysteine-rich domain 11
FGAM synthase PurL, linker domain PurM N-terminal domain-like 11
WW domain FKBP-like 11
L domain-like DNase I-like 11
Ubiquitin-like XPC-binding domain 11
UBC-like Endosomal sorting complex assembly domain 11
NAD(P)-binding Rossmann-fold domains Thioesterase/thiol ester dehydrase-isomerase 11
FabD/lysophospholipase-like Thioesterase/thiol ester dehydrase-isomerase 11
PH domain-like BEACH domain 11
Aldolase Aminoacid dehydrogenase-like, N-terminal domain 11
P-loop containing nucleoside triphosphate hydrolases Microbial and mitochondrial ADK, insert "zinc finger" domain 11
PIN domain-like Nucleic acid-binding proteins 11
SAM/Pointed domain PH domain-like 11
RING/U-box Quinoprotein alcohol dehydrogenase-like 11
Chaperone J-domain CSL zinc finger 11
YbaK/ProRS associated domain C-terminal domain of ProRS 11
TPR-like F-box domain 11
N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 L30e-like 11
Siroheme synthase middle domains-like Tetrapyrrole methylase 11
Chromo domain-like Acyl-CoA N-acyltransferases (Nat) 11
alpha/beta-Hydrolases WD40 repeat-like 11
F-box domain Clavaminate synthase-like 11
Nqo1 FMN-binding domain-like Nqo1 middle domain-like 11
ARID-like FYVE/PHD zinc finger 11
SET domain WW domain 11
Amidase signature (AS) enzymes Cyclophilin-like 11
Ypt/Rab-GAP domain of gyp1p EF-hand 11
Myosin S1 fragment, N-terminal domain P-loop containing nucleoside triphosphate hydrolases 11
UBC-like Class II aaRS and biotin synthetases 11
(Trans)glycosidases (Trans)glycosidases 11
Periplasmic binding protein-like II GlnB-like 11
Adenine nucleotide alpha hydrolases-like GMP synthetase C-terminal dimerisation domain 11
Quinoprotein alcohol dehydrogenase-like Protein kinase-like (PK-like) 11
UBA-like UBA-like 11
FabD/lysophospholipase-like Inosine monophosphate dehydrogenase (IMPDH) 11
TK C-terminal domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 11
PurM C-terminal domain-like PurM C-terminal domain-like 11
Tryptophan synthase beta subunit-like PLP-dependent enzymes ACT-like 11
PP2C-like Nucleotide cyclase 11
P-loop containing nucleoside triphosphate hydrolases Tropomyosin 11
FAD/NAD(P)-binding domain 4Fe-4S ferredoxins 11
BAH domain P-loop containing nucleoside triphosphate hydrolases 11
Ribonuclease H-like RNA-binding domain, RBD 11
RING/U-box TRAF domain-like 11
PurS-like FGAM synthase PurL, linker domain 11
PreATP-grasp domain PurM N-terminal domain-like 11
CO dehydrogenase ISP C-domain like FAD-binding/transporter-associated domain-like 11
Glutathione synthetase ATP-binding domain-like Aspartate/ornithine carbamoyltransferase 11
ENTH/VHS domain FYVE/PHD zinc finger 11
Inosine monophosphate dehydrogenase (IMPDH) Thioesterase/thiol ester dehydrase-isomerase 11
RNA-binding domain, RBD PABC (PABP) domain 11
PX domain BAR/IMD domain-like 11
Prokaryotic type KH domain (KH-domain type II) Ribosomal protein S3 C-terminal domain 11
CO dehydrogenase ISP C-domain like Molybdenum cofactor-binding domain 11
NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains 11
UBC-like Protein kinase-like (PK-like) 11
Thiolase-like 4'-phosphopantetheinyl transferase 11
Amidase signature (AS) enzymes Glutathione synthetase ATP-binding domain-like 11
CO dehydrogenase molybdoprotein N-domain-like Molybdenum cofactor-binding domain 11
UDP-Glycosyltransferase/glycogen phosphorylase UDP-Glycosyltransferase/glycogen phosphorylase 11
Nucleic acid-binding proteins eIF2alpha middle domain-like 11
Ran binding protein zinc finger-like Ran binding protein zinc finger-like 11
Ribonuclease H-like SH2 domain 11
UDP-Glycosyltransferase/glycogen phosphorylase HAD-like 11
Double Clp-N motif P-loop containing nucleoside triphosphate hydrolases 11
Globin-like Ferredoxin reductase-like, C-terminal NADP-linked domain 11
PUA domain-like SWIB/MDM2 domain 11
P-loop containing nucleoside triphosphate hydrolases HRDC-like 11
Glucocorticoid receptor-like (DNA-binding domain) Glucocorticoid receptor-like (DNA-binding domain) 11
4'-phosphopantetheinyl transferase 4'-phosphopantetheinyl transferase 11
Acyl-CoA dehydrogenase NM domain-like Acyl-CoA dehydrogenase C-terminal domain-like 11
Rudiment single hybrid motif Cyclophilin-like 11
BRCT domain P-loop containing nucleoside triphosphate hydrolases 11
BRCT domain Lesion bypass DNA polymerase (Y-family), little finger domain 11
Tryptophan synthase beta subunit-like PLP-dependent enzymes CBS-domain pair 11
PX domain GTPase activation domain, GAP 11
Carbamate kinase-like ACT-like 11
Eukaryotic RPB5 N-terminal domain RPB5-like RNA polymerase subunit 11
Ribonuclease H-like HRDC-like 11
Rudiment single hybrid motif post-HMGL domain-like 11
Carbamoyl phosphate synthetase, small subunit N-terminal domain Glutathione synthetase ATP-binding domain-like 11
2Fe-2S ferredoxin-like alpha-helical ferredoxin 11
Dom34/Pelota N-terminal domain-like L30e-like 11
CoA-dependent acyltransferases Acetyl-CoA synthetase-like 11
TGS-like ThrRS/AlaRS common domain 11
PurM C-terminal domain-like Class I glutamine amidotransferase-like 11
PUA domain-like eIF1-like 11
CO dehydrogenase flavoprotein C-terminal domain-like Molybdenum cofactor-binding domain 11
CCCH zinc finger FMN-linked oxidoreductases 11
SH3-domain CAD & PB1 domains 11
BEACH domain WD40 repeat-like 11
Galactose mutarotase-like Galactose-binding domain-like 11
Staphylococcal nuclease Staphylococcal nuclease 11
ACP-like NAD(P)-binding Rossmann-fold domains 11
Phosphoenolpyruvate/pyruvate domain PK C-terminal domain-like 11
Cyclophilin-like Cyclophilin-like 11
SMAD/FHA domain RING/U-box 11
Pyruvate-ferredoxin oxidoreductase, PFOR, domain III Riboflavin synthase domain-like 11
Ribonuclease H-like Ran binding protein zinc finger-like 11
L9 N-domain-like Ribonuclease H-like 11
Families 57/38 glycoside transferase middle domain Galactose mutarotase-like 11
Zn2/Cys6 DNA-binding domain PYP-like sensor domain (PAS domain) 11
Adenine nucleotide alpha hydrolases-like Argininosuccinate synthetase, C-terminal domain 11
Sec7 domain ARM repeat 11
Trypsin-like serine proteases PDZ domain-like 11
Alpha subunit of glutamate synthase, C-terminal domain Nucleotide-binding domain 11
Cytochrome c Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor 11
PH domain-like Oxysterol-binding protein-like 11
FYVE/PHD zinc finger Rabenosyn-5 Rab-binding domain-like 11
2Fe-2S ferredoxin-like CO dehydrogenase molybdoprotein N-domain-like 11
Tetrahydrobiopterin biosynthesis enzymes-like Dihydropteroate synthetase-like 11
CO dehydrogenase ISP C-domain like CO dehydrogenase molybdoprotein N-domain-like 11
"Winged helix" DNA-binding domain RNA-binding domain, RBD 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) PRTase-like 11
Cation efflux protein transmembrane domain-like Cation efflux protein transmembrane domain-like 11
Cysteine-rich domain Cysteine-rich domain 11
E set domains Ankyrin repeat 11
Adenine nucleotide alpha hydrolases-like YjgF-like 11
FAD-binding/transporter-associated domain-like CO dehydrogenase flavoprotein C-terminal domain-like 11
NSFL1 (p97 ATPase) cofactor p47, SEP domain Ubiquitin-like 11
Chaperone J-domain RNA-binding domain, RBD 11
PurS-like PurM C-terminal domain-like 11
Multiheme cytochromes beta-beta-alpha zinc fingers 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Alpha subunit of glutamate synthase, C-terminal domain 11
Ribosomal L27 protein-like Eukaryotic type KH-domain (KH-domain type I) 11
Sialidases Oligoxyloglucan reducing end-specific cellobiohydrolase 11
WD40 repeat-like C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase 11
Nucleic acid-binding proteins SH2 domain 11
SH3-domain Cysteine proteinases 11
PLC-like phosphodiesterases C2 domain (Calcium/lipid-binding domain, CaLB) 11
GST C-terminal domain-like eEF1-gamma domain 11
Glutathione synthetase ATP-binding domain-like PH0987 N-terminal domain-like 11
Elongation factor TFIIS domain 2 Zinc beta-ribbon 11
Acetyl-CoA synthetase-like ACP-like 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase HSP90 C-terminal domain 11
Zn2/Cys6 DNA-binding domain Zn2/Cys6 DNA-binding domain 11
Subtilisin-like Galactose-binding domain-like 11
Class II aaRS and biotin synthetases Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) 11
2Fe-2S ferredoxin-like 4Fe-4S ferredoxins 11
(Trans)glycosidases Chitinase insertion domain 11
UBC-like P-loop containing nucleoside triphosphate hydrolases 11
Protein kinase-like (PK-like) WD40 repeat-like 11
PH domain-like BSD domain-like 11
Carbamate kinase-like PUA domain-like 11
Methyl-accepting chemotaxis protein (MCP) signaling domain CheY-like 11
Galactose-binding domain-like Galactose-binding domain-like 11
L30e-like alpha/beta knot 11
Aldolase 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 11
Ribonuclease H-like RuvA domain 2-like 11
Nucleotidylyl transferase tRNA-binding arm 11
TGS-like Class II aaRS and biotin synthetases 11
Ribosomal protein S5 domain 2-like Ribosomal protein L30p/L7e 11
UBA-like TPR-like 11
PreATP-grasp domain N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) 11
RuvA domain 2-like SH2 domain 11
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Phosphofructokinase 11
FAD-linked reductases, C-terminal domain 4Fe-4S ferredoxins 11
Voltage-gated potassium channels Voltage-gated potassium channels 11
Ribosomal protein L7/12, oligomerisation (N-terminal) domain ClpS-like 11
post-HMGL domain-like Single hybrid motif 11
NAD(P)-binding Rossmann-fold domains Siroheme synthase middle domains-like 11
Concanavalin A-like lectins/glucanases BEACH domain 11
Taf5 N-terminal domain-like WD40 repeat-like 11
NAD(P)-binding Rossmann-fold domains 4'-phosphopantetheinyl transferase 11
Class I glutamine amidotransferase-like PreATP-grasp domain 11
Tex N-terminal region-like SH2 domain 11
DNA polymerase beta, N-terminal domain-like Nucleotidyltransferase 11
Class I glutamine amidotransferase-like Methylglyoxal synthase-like 11
Chromo domain-like Chromo domain-like 11
Calponin-homology domain, CH-domain EB1 dimerisation domain-like 11
Hypothetical protein c14orf129, hspc210 TPR-like 11
PurS-like PurM N-terminal domain-like 11
Ribonuclease H-like Ribonuclease H-like 11
FabD/lysophospholipase-like FabD/lysophospholipase-like 11
Transducin (alpha subunit), insertion domain P-loop containing nucleoside triphosphate hydrolases 11
Nqo1 FMN-binding domain-like Nqo1C-terminal domain-like 11
Release factor Peptidyl-tRNA hydrolase domain-like 11
2Fe-2S ferredoxin-like FAD-binding/transporter-associated domain-like 11
Lissencephaly-1 protein (Lis-1, PAF-AH alpha) N-terminal domain WD40 repeat-like 11
ARM repeat Rap/Ran-GAP 11
Clathrin heavy-chain terminal domain ARM repeat 11
SNARE fusion complex SNARE fusion complex 11
4Fe-4S ferredoxins P-loop containing nucleoside triphosphate hydrolases 11
alpha/beta-Hydrolases (Phosphotyrosine protein) phosphatases II 11
Rad51 N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 11
Adenine nucleotide alpha hydrolases-like DHS-like NAD/FAD-binding domain 11
EPT/RTPC-like Aminoacid dehydrogenase-like, N-terminal domain 11
YbaK/ProRS associated domain Class II aaRS and biotin synthetases 11
FGAM synthase PurL, linker domain PurM C-terminal domain-like 11
GroES-like GroES-like 11
Ubiquitin-like AN1-like Zinc finger 11
HR1 repeat Protein kinase-like (PK-like) 11
Ribosomal L27 protein-like Nucleic acid-binding proteins 11
GTPase activation domain, GAP RGC domain-like 11
CheY-like CheY-like 11
ATP-dependent DNA ligase DNA-binding domain Nucleic acid-binding proteins 11
Ribosomal protein S5 domain 2-like DNA mismatch repair protein MutL 11
PsbU/PolX domain-like Nucleotidyltransferase 11
Arp2/3 complex subunits Arp2/3 complex subunits 11
CHY zinc finger-like RING/U-box 11
GST C-terminal domain-like Nucleic acid-binding proteins 11
Supernatant protein factor (SPF), C-terminal domain PH domain-like 11
PreATP-grasp domain PH0987 N-terminal domain-like 11
TK C-terminal domain-like Flavoproteins 11
(Trans)glycosidases Beta-D-glucan exohydrolase, C-terminal domain 11
Supernatant protein factor (SPF), C-terminal domain Oxysterol-binding protein-like 11
L domain-like NTF2-like 11
Ubiquitin-like Ubiquitin-like 11
TRAF domain-like TRAF domain-like 11
Nucleotide-diphospho-sugar transferases ARM repeat 11
FYVE/PHD zinc finger Elongation factor TFIIS domain 2 11
Nucleic acid-binding proteins "Winged helix" DNA-binding domain 11
PK beta-barrel domain-like Phosphoenolpyruvate/pyruvate domain 11
"Winged helix" DNA-binding domain HRDC-like 11
FMN-linked oxidoreductases Alpha subunit of glutamate synthase, C-terminal domain 11
PH domain-like GTPase activation domain, GAP 11
Nucleic acid-binding proteins S-adenosyl-L-methionine-dependent methyltransferases 11
SurE-like Glutathione synthetase ATP-binding domain-like 11
PreATP-grasp domain PurM C-terminal domain-like 11
Tex N-terminal region-like Nucleic acid-binding proteins 11
POZ domain POZ domain 11
CO dehydrogenase ISP C-domain like CO dehydrogenase flavoprotein C-terminal domain-like 11
F-box domain RCC1/BLIP-II 11
Glutamine synthetase, N-terminal domain Glutamine synthetase/guanido kinase 11
VPS9 domain UBA-like 11
CCCH zinc finger RING/U-box 11
2Fe-2S ferredoxin-like Molybdenum cofactor-binding domain 11
Rhodanese/Cell cycle control phosphatase Rhodanese/Cell cycle control phosphatase 11
Trimeric LpxA-like enzymes ARM repeat 11
S-adenosylmethionine synthetase S-adenosylmethionine synthetase 11
PDZ domain-like PDZ domain-like 11
Carbamoyl phosphate synthetase, large subunit connection domain Metallo-dependent hydrolases 11
FMN-linked oxidoreductases Nucleotide-binding domain 11
PH0987 N-terminal domain-like Single hybrid motif 11
HR1 repeat C2 domain (Calcium/lipid-binding domain, CaLB) 11
Ras GEF Ras GEF 11
RNA-binding domain, RBD Ran binding protein zinc finger-like 11
PH domain-like CAD & PB1 domains 11
Nitrite and sulphite reductase 4Fe-4S domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 11
TK C-terminal domain-like Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 11
Dehydroquinate synthase-like EPT/RTPC-like 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Nucleotide-binding domain 11
Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 11
Class I glutamine amidotransferase-like Carbamoyl phosphate synthetase, large subunit connection domain 11
Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like 11
Rudiment single hybrid motif ClpP/crotonase 11
Starch-binding domain-like Galactose-binding domain-like 11
ENTH/VHS domain SH3-domain 11
PreATP-grasp domain post-HMGL domain-like 11
Endosomal sorting complex assembly domain VPS28 C-terminal domain-like 11
Aldolase Single hybrid motif 11
UBA-like XPC-binding domain 11
PheT/TilS domain Class II aaRS and biotin synthetases 11
Periplasmic binding protein-like II Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Nucleotidylyl transferase 11
PEP carboxykinase N-terminal domain PEP carboxykinase-like 11
Pseudouridine synthase PUA domain-like 11
PAP/OAS1 substrate-binding domain PAP/Archaeal CCA-adding enzyme, C-terminal domain 11
TK C-terminal domain-like Riboflavin synthase domain-like 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) ThrRS/AlaRS common domain 11
ClpS-like RING/U-box 11
P-loop containing nucleoside triphosphate hydrolases Aldolase 11
EF-hand UBA-like 11
CBS-domain pair CAD & PB1 domains 11
Carbamate kinase-like NAD(P)-binding Rossmann-fold domains 11
F1F0 ATP synthase subunit C F1F0 ATP synthase subunit C 11
Ras GEF GTPase activation domain, GAP 11
PurM N-terminal domain-like Class I glutamine amidotransferase-like 11
ISP transmembrane anchor ISP domain 11
eIF2alpha middle domain-like eIF-2-alpha, C-terminal domain 11
TGS-like Class II aaRS ABD-related 11
RibA-like RibA-like 11
POZ domain Skp1 dimerisation domain-like 11
PX domain CAD & PB1 domains 11
FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) Protein kinase-like (PK-like) 11
Metallo-dependent hydrolases Aspartate/ornithine carbamoyltransferase 11
Nucleotide-binding domain FAD/NAD(P)-binding domain 11
PreATP-grasp domain Aldolase 11
2Fe-2S ferredoxin-like CO dehydrogenase flavoprotein C-terminal domain-like 11
Chromo domain-like P-loop containing nucleoside triphosphate hydrolases 11
Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 Zinc beta-ribbon 11
Methylglyoxal synthase-like Metallo-dependent hydrolases 11
TPR-like Chaperone J-domain 11
ARM repeat FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) 11
Tex N-terminal region-like Ribonuclease H-like 11
P-loop containing nucleoside triphosphate hydrolases EF-hand 11
Leukotriene A4 hydrolase N-terminal domain ARM repeat 11
ENTH/VHS domain ENTH/VHS domain 11
"Winged helix" DNA-binding domain GTPase activation domain, GAP 11
SH3-domain SAM/Pointed domain 11
RING/U-box UBA-like 11
NagB/RpiA/CoA transferase-like NagB/RpiA/CoA transferase-like 11
GAT-like domain Clathrin adaptor appendage domain 11
Thiamin diphosphate-binding fold (THDP-binding) Flavoproteins 11
PreATP-grasp domain ClpP/crotonase 11
Carbamoyl phosphate synthetase, small subunit N-terminal domain Metallo-dependent hydrolases 11
ClpP/crotonase ClpP/crotonase 11
vWA-like SAP domain 11
NAD(P)-binding Rossmann-fold domains Succinyl-CoA synthetase domains 11
YjgF-like YjgF-like 11
Galactose mutarotase-like Starch-binding domain-like 11
PH domain-like UDP-Glycosyltransferase/glycogen phosphorylase 11
DAK1/DegV-like DhaL-like 11
Eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment DNA breaking-rejoining enzymes 11
Cysteine proteinases Calpain large subunit, middle domain (domain III) 11
"Winged helix" DNA-binding domain CheY-like 11
Chaperone J-domain Sec63 N-terminal domain-like 11
Cadherin-like Cadherin-like 11
Metallo-hydrolase/oxidoreductase Metallo-hydrolase/oxidoreductase 11
WD40 repeat-like Zn-dependent exopeptidases 11
PH domain-like Ran binding protein zinc finger-like 11
Methyl-accepting chemotaxis protein (MCP) signaling domain ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
mRNA decapping enzyme DcpS N-terminal domain HIT-like 11
SpoIIaa-like cAMP-binding domain-like 11
PX domain t-snare proteins 11
Fibronectin type III BRCT domain 11
Acetyl-CoA synthetase-like Acetyl-CoA synthetase-like 11
Translation proteins Translation proteins 11
P-loop containing nucleoside triphosphate hydrolases Signal peptide-binding domain 11
Ran binding protein zinc finger-like "Winged helix" DNA-binding domain 11
WW domain Hect, E3 ligase catalytic domain 11
Class I glutamine amidotransferase-like Glutathione synthetase ATP-binding domain-like 11
Oligoxyloglucan reducing end-specific cellobiohydrolase Oligoxyloglucan reducing end-specific cellobiohydrolase 11
PH domain-like PH domain-like 11
P-loop containing nucleoside triphosphate hydrolases Class I glutamine amidotransferase-like 11
CO dehydrogenase flavoprotein C-terminal domain-like CO dehydrogenase molybdoprotein N-domain-like 11
HisI-like all-alpha NTP pyrophosphatases 11
PreATP-grasp domain Aspartate/ornithine carbamoyltransferase 11
Formate/glycerate dehydrogenase catalytic domain-like ACT-like 11
TK C-terminal domain-like Ferredoxin reductase-like, C-terminal NADP-linked domain 11
Zinc-binding domain of translation initiation factor 2 beta ARM repeat 11
PH domain-like Protein kinase-like (PK-like) 11
EPT/RTPC-like Aldolase 11
DBL homology domain (DH-domain) CAD & PB1 domains 11
FYVE/PHD zinc finger SET domain 11
Thiamin phosphate synthase Ribokinase-like 11
"Winged helix" DNA-binding domain Protein kinase-like (PK-like) 11
Dcp2 domain-like Nudix 11
PLP-dependent transferases PLP-dependent transferases 11
HIT/MYND zinc finger-like SET domain 11
PH domain-like "Winged helix" DNA-binding domain 11
TPR-like Metallo-dependent phosphatases 11
Chaperone J-domain C-terminal domain of PLC-beta 11
UBA-like Chaperone J-domain 11
FAD-binding/transporter-associated domain-like CO dehydrogenase molybdoprotein N-domain-like 11
Tex N-terminal region-like RuvA domain 2-like 11
Metalloproteases ("zincins"), catalytic domain Mannose-binding lectins 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
TK C-terminal domain-like Nitrite/Sulfite reductase N-terminal domain-like 11
Glycerol-3-phosphate (1)-acyltransferase Glycerol-3-phosphate (1)-acyltransferase 11
Rudiment single hybrid motif Aldolase 11
cAMP-binding domain-like RNI-like 11
WD40 repeat-like Ribonuclease H-like 11
dsRNA-binding domain-like UBC-like 11
TATA-box binding protein-like TATA-box binding protein-like 11
RNA-binding domain, RBD P-loop containing nucleoside triphosphate hydrolases 11
dsRNA-binding domain-like P-loop containing nucleoside triphosphate hydrolases 11
PLP-dependent transferases MOSC N-terminal domain-like 11
Rap30/74 interaction domains "Winged helix" DNA-binding domain 11
PX domain SNARE fusion complex 11
Folate-binding domain Aminomethyltransferase beta-barrel domain 11
GST C-terminal domain-like eEF-1beta-like 11
Zinc hairpin stack RING/U-box 11
Surp module (SWAP domain) Surp module (SWAP domain) 11
Cellulose-binding domain Barwin-like endoglucanases 11
Glycoside hydrolase/deacetylase Families 57/38 glycoside transferase middle domain 11
Class II aaRS ABD-related C-terminal domain of ProRS 11
Thiamin pyrophosphokinase, catalytic domain Thiamin pyrophosphokinase, substrate-binding domain 11
C2 domain (Calcium/lipid-binding domain, CaLB) Hect, E3 ligase catalytic domain 11
Coiled-coil domain of nucleotide exchange factor GrpE Head domain of nucleotide exchange factor GrpE 11
Galactose mutarotase-like (Trans)glycosidases 11
Calponin-homology domain, CH-domain GTPase activation domain, GAP 11
Nucleotidylyl transferase Alpha-L RNA-binding motif 11
Eukaryotic type KH-domain (KH-domain type I) Retrovirus zinc finger-like domains 11
Amidase signature (AS) enzymes Rudiment single hybrid motif 11
Indigoidine synthase A-like Ribokinase-like 11
IlvD/EDD N-terminal domain-like LeuD/IlvD-like 11
Glutathione synthetase ATP-binding domain-like ClpP/crotonase 11
Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 Elongation factor TFIIS domain 2 11
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex CoA-dependent acyltransferases 11
Nucleic acid-binding proteins eIF-2-alpha, C-terminal domain 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
Glutathione synthetase ATP-binding domain-like N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) 11
C2 domain (Calcium/lipid-binding domain, CaLB) WW domain 11
ARID-like Clavaminate synthase-like 11
Cytochrome b5-like heme/steroid binding domain FMN-linked oxidoreductases 11
Soluble quinoprotein glucose dehydrogenase WD40 repeat-like 11
Class I glutamine amidotransferase-like Class II aaRS and biotin synthetases 11
HMA, heavy metal-associated domain Metal cation-transporting ATPase, ATP-binding domain N 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) Translation proteins 11
UBA-like Thioredoxin-like 11
SAM/Pointed domain Protein kinase-like (PK-like) 11
Amidase signature (AS) enzymes PH0987 N-terminal domain-like 11
EPT/RTPC-like NAD(P)-binding Rossmann-fold domains 11
SAM/Pointed domain Ubiquitin-like 11
cAMP-binding domain-like FabD/lysophospholipase-like 11
Ribosomal protein S5 domain 2-like Type II DNA topoisomerase 11
Pyruvate-ferredoxin oxidoreductase, PFOR, domain III Ferredoxin reductase-like, C-terminal NADP-linked domain 11
Riboflavin synthase domain-like Riboflavin synthase domain-like 11
PK beta-barrel domain-like PK C-terminal domain-like 11
Actin depolymerizing proteins SH3-domain 11
Chaperone J-domain beta-beta-alpha zinc fingers 11
ENTH/VHS domain I/LWEQ domain 11
Cysteine proteinases Ribonuclease H-like 11
GST C-terminal domain-like Ribosomal protein L25-like 11
SH3-domain PX domain 11
UBA-like P-loop containing nucleoside triphosphate hydrolases 11
Polo-box domain Polo-box domain 11
ValRS/IleRS/LeuRS editing domain tRNA-binding arm 11
Thiamin diphosphate-binding fold (THDP-binding) Nitrite and sulphite reductase 4Fe-4S domain-like 11
RING/U-box RNA-binding domain, RBD 11
Glutathione synthetase ATP-binding domain-like PurM C-terminal domain-like 11
N-terminal domain of adenylylcyclase associated protein, CAP C-terminal domain of adenylylcyclase associated protein 11
Methylglyoxal synthase-like Aspartate/ornithine carbamoyltransferase 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases tRNA-binding arm 11
Glutathione synthetase ATP-binding domain-like Cyclophilin-like 11
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 11
Acetyl-CoA synthetase-like NAD(P)-binding Rossmann-fold domains 11
beta-beta-alpha zinc fingers YjgF-like 11
PUA domain-like Nucleotidylyl transferase 11
Periplasmic binding protein-like II ACT-like 11
Cyclophilin-like RNA-binding domain, RBD 11
BRCT domain DNA polymerase beta, N-terminal domain-like 11
Activator of Hsp90 ATPase, Aha1 Bet v1-like 11
Ribulose-phoshate binding barrel Tryptophan synthase beta subunit-like PLP-dependent enzymes 11
Nucleic acid-binding proteins BRCT domain 11

Jump to [ Top of page · Add/remove domain pairs · Add/remove genomes · Domain combination pairs ]