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Domain combination pairs in Nitrosococcus halophilus Nc4

All pairs of domain combinations at the superfamily level are listed here.
The identification of domain pairs does not account for the possibility of non-contiguous domains. Inserted, or interlaced, domains are seen as having a simple pair ordering.

  • For a list of unique full length architectures for this genome click here (can be slow).
Adjacent domain pairs graph

Graph of adjacent domain pairs.


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Domain combination pairs

719 domain combination pairs.
Click on a column heading to sort that column, or the 'View' button to see domain architetures for that domain pair combination.

Superfamily (N) Superfamily (C) Number of occurrances Number unique
P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases 2915
Homodimeric domain of signal transducing histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 2314
Actin-like ATPase domain Actin-like ATPase domain 145
P-loop containing nucleoside triphosphate hydrolases Homeodomain-like 144
PYP-like sensor domain (PAS domain) ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 1410
PYP-like sensor domain (PAS domain) Homodimeric domain of signal transducing histidine kinase 139
Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain 117
NAD(P)-binding Rossmann-fold domains 6-phosphogluconate dehydrogenase C-terminal domain-like 104
Nucleotide cyclase EAL domain-like 108
NAD(P)-binding Rossmann-fold domains Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 104
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 106
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 106
Aminoacid dehydrogenase-like, N-terminal domain NAD(P)-binding Rossmann-fold domains 103
PYP-like sensor domain (PAS domain) PYP-like sensor domain (PAS domain) 107
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB transmembrane domain 106
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 106
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB transmembrane domain 106
Calcium ATPase, transduction domain A HAD-like 98
Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) 97
P-loop containing nucleoside triphosphate hydrolases Translation proteins 95
CheY-like Homeodomain-like 92
CheY-like P-loop containing nucleoside triphosphate hydrolases 92
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheY-like 87
TPR-like TPR-like 85
Ribosomal protein S5 domain 2-like P-loop containing nucleoside triphosphate hydrolases 86
Cytochrome c Cytochrome c 86
(Trans)glycosidases Glycosyl hydrolase domain 86
Sigma2 domain of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 83
Thiamin diphosphate-binding fold (THDP-binding) TK C-terminal domain-like 85
HAD-like Calcium ATPase, transmembrane domain M 87
Calcium ATPase, transduction domain A Calcium ATPase, transmembrane domain M 87
P-loop containing nucleoside triphosphate hydrolases C-terminal domain of alpha and beta subunits of F1 ATP synthase 82
PYP-like sensor domain (PAS domain) CheY-like 86
PYP-like sensor domain (PAS domain) Nucleotide cyclase 75
PYP-like sensor domain (PAS domain) EAL domain-like 75
FAD-binding/transporter-associated domain-like FAD-linked oxidases, C-terminal domain 74
FAD/NAD(P)-binding domain FAD/NAD-linked reductases, dimerisation (C-terminal) domain 73
Cupredoxins Cupredoxins 75
Homeodomain-like Ribonuclease H-like 71
Homodimeric domain of signal transducing histidine kinase CheY-like 76
CheY-like C-terminal effector domain of the bipartite response regulators 72
PreATP-grasp domain Glutathione synthetase ATP-binding domain-like 63
N-terminal domain of alpha and beta subunits of F1 ATP synthase P-loop containing nucleoside triphosphate hydrolases 61
Riboflavin synthase domain-like Ferredoxin reductase-like, C-terminal NADP-linked domain 63
CheY-like Nucleotide cyclase 65
DNA methylase specificity domain DNA methylase specificity domain 63
TTHA1013/TTHA0281-like Ribbon-helix-helix 61
MurD-like peptide ligases, catalytic domain MurD-like peptide ligases, peptide-binding domain 63
N-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase 61
Formate/glycerate dehydrogenase catalytic domain-like NAD(P)-binding Rossmann-fold domains 63
Triger factor/SurA peptide-binding domain-like FKBP-like 65
Nucleotidylyl transferase Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 66
Single hybrid motif CoA-dependent acyltransferases 52
Thiolase-like Thiolase-like 51
Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 52
Formate dehydrogenase/DMSO reductase, domains 1-3 ADC-like 53
Translation proteins EF-G C-terminal domain-like 53
"Winged helix" DNA-binding domain Periplasmic binding protein-like II 51
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Ribosomal protein S5 domain 2-like 55
Single hybrid motif Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 52
P-loop containing nucleoside triphosphate hydrolases EF-G C-terminal domain-like 53
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex CoA-dependent acyltransferases 52
ABC transporter transmembrane region P-loop containing nucleoside triphosphate hydrolases 53
Trypsin-like serine proteases PDZ domain-like 54
PurM N-terminal domain-like PurM C-terminal domain-like 52
4Fe-4S ferredoxins ADC-like 42
GAF domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 44
CBS-domain pair FAD-binding/transporter-associated domain-like 41
Phospholipase D/nuclease Phospholipase D/nuclease 44
EF-G C-terminal domain-like EF-G C-terminal domain-like 42
E set domains (Trans)glycosidases 43
Calcium ATPase, transduction domain A Metal cation-transporting ATPase, ATP-binding domain N 43
EAL domain-like CheY-like 43
Putative DNA-binding domain Resolvase-like 41
4Fe-4S ferredoxins Formate dehydrogenase/DMSO reductase, domains 1-3 42
P-loop containing nucleoside triphosphate hydrolases post-AAA+ oligomerization domain-like 42
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Adenine nucleotide alpha hydrolases-like 41
Phosphohistidine domain Phosphoenolpyruvate/pyruvate domain 43
Metal cation-transporting ATPase, ATP-binding domain N HAD-like 43
Adenine nucleotide alpha hydrolases-like Adenine nucleotide alpha hydrolases-like 41
Metal cation-transporting ATPase, ATP-binding domain N Calcium ATPase, transmembrane domain M 43
GAF domain-like PYP-like sensor domain (PAS domain) 43
Zn-dependent exopeptidases Bacterial exopeptidase dimerisation domain 41
PLP-binding barrel Alanine racemase C-terminal domain-like 43
NAD(P)-binding Rossmann-fold domains TrkA C-terminal domain-like 33
MurCD N-terminal domain MurD-like peptide ligases, catalytic domain 31
Nucleic acid-binding proteins Class II aaRS and biotin synthetases 33
Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like 32
P-loop containing nucleoside triphosphate hydrolases EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 31
NAD(P)-binding Rossmann-fold domains Succinyl-CoA synthetase domains 32
GroES-like NAD(P)-binding Rossmann-fold domains 31
Folate-binding domain Aminomethyltransferase beta-barrel domain 32
Class II aaRS and biotin synthetases Class II aaRS ABD-related 33
HD-domain/PDEase-like ACT-like 32
Composite domain of metallo-dependent hydrolases Metallo-dependent hydrolases 32
Phosphoglucomutase, first 3 domains Phosphoglucomutase, C-terminal domain 32
Succinyl-CoA synthetase domains Glutathione synthetase ATP-binding domain-like 32
Alpha-L RNA-binding motif Pseudouridine synthase 31
ACT-like ACT-like 32
CBS-domain pair MgtE membrane domain-like 31
Glutathione synthetase ATP-binding domain-like Rudiment single hybrid motif 31
PDZ domain-like PDZ domain-like 33
Nucleotidyltransferase ACT-like 32
2Fe-2S ferredoxin-like 4Fe-4S ferredoxins 31
Calcium ATPase, transduction domain A LysM domain 32
Nucleotide-diphospho-sugar transferases Trimeric LpxA-like enzymes 31
ValRS/IleRS/LeuRS editing domain Nucleotidylyl transferase 33
Nqo1 FMN-binding domain-like Nqo1 middle domain-like 32
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphohistidine domain 32
E set domains Glycosyl hydrolase domain 32
Nucleic acid-binding proteins RuvA domain 2-like 33
MgtE N-terminal domain-like MgtE membrane domain-like 31
HAD-like LysM domain 32
Nucleic acid-binding proteins Nucleic acid-binding proteins 33
Nqo1 middle domain-like Nqo1C-terminal domain-like 32
MgtE N-terminal domain-like CBS-domain pair 31
Calcium ATPase, transmembrane domain M LysM domain 32
Translation proteins EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 31
GAF domain-like Homodimeric domain of signal transducing histidine kinase 33
Nqo1 FMN-binding domain-like Nqo1C-terminal domain-like 32
Homeodomain-like Tetracyclin repressor-like, C-terminal domain 31
PreATP-grasp domain Rudiment single hybrid motif 31
Acetyl-CoA synthetase-like ACP-like 33
2Fe-2S ferredoxin-like Formate dehydrogenase/DMSO reductase, domains 1-3 31
DNA repair protein MutS, domain III P-loop containing nucleoside triphosphate hydrolases 33
Nucleotide-diphospho-sugar transferases S-adenosyl-L-methionine-dependent methyltransferases 33
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphoenolpyruvate/pyruvate domain 32
Nucleotidyltransferase HD-domain/PDEase-like 32
MurCD N-terminal domain MurD-like peptide ligases, peptide-binding domain 31
LuxS/MPP-like metallohydrolase LuxS/MPP-like metallohydrolase 32
ValRS/IleRS/LeuRS editing domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 33
Rhodanese/Cell cycle control phosphatase Rhodanese/Cell cycle control phosphatase 32
P-loop containing nucleoside triphosphate hydrolases "Winged helix" DNA-binding domain 32
2Fe-2S ferredoxin-like ADC-like 31
Phosphoglucomutase, first 3 domains Phosphoglucomutase, first 3 domains 32
Thiamin diphosphate-binding fold (THDP-binding) DHS-like NAD/FAD-binding domain 21
Ribosomal protein S5 domain 2-like Ribonuclease PH domain 2-like 22
HAMP domain-like Homodimeric domain of signal transducing histidine kinase 22
NAD(P)-binding Rossmann-fold domains Acyl-CoA N-acyltransferases (Nat) 21
Cytochrome c oxidase subunit II-like, transmembrane region Cupredoxins 21
PK beta-barrel domain-like Phosphoenolpyruvate/pyruvate domain 22
Acyl-CoA dehydrogenase NM domain-like Acyl-CoA dehydrogenase C-terminal domain-like 21
S-adenosyl-L-methionine-dependent methyltransferases UDP-Glycosyltransferase/glycogen phosphorylase 22
Nucleotidylyl transferase An anticodon-binding domain of class I aminoacyl-tRNA synthetases 21
GAF domain-like EAL domain-like 21
Nucleotidyltransferase Poly A polymerase C-terminal region-like 22
FAD/NAD(P)-binding domain FAD-linked reductases, C-terminal domain 22
Carbamate kinase-like ACT-like 22
NAD(P)-binding Rossmann-fold domains Glutathione synthetase ATP-binding domain-like 21
NAD(P)-binding Rossmann-fold domains UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 21
CoA-dependent acyltransferases CoA-dependent acyltransferases 22
EspE N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 21
Galactose mutarotase-like Glycosyl hydrolase domain 22
TPR-like UDP-Glycosyltransferase/glycogen phosphorylase 22
Histidine-containing phosphotransfer domain, HPT domain CheY-like 22
Succinyl-CoA synthetase domains Acyl-CoA N-acyltransferases (Nat) 21
S-adenosyl-L-methionine-dependent methyltransferases Trm112p-like 22
Porins Porins 22
HD-domain/PDEase-like TGS-like 21
DNA repair protein MutS, domain II P-loop containing nucleoside triphosphate hydrolases 22
Type II DNA topoisomerase GyrA/ParC C-terminal domain-like 21
cAMP-binding domain-like "Winged helix" DNA-binding domain 21
CoA-dependent acyltransferases ACP-like 22
P-loop containing nucleoside triphosphate hydrolases Restriction endonuclease-like 22
Double Clp-N motif P-loop containing nucleoside triphosphate hydrolases 22
P-loop containing nucleoside triphosphate hydrolases FtsH protease domain-like 22
DNA repair protein MutS, domain I DNA repair protein MutS, domain II 22
MurE/MurF N-terminal domain MurD-like peptide ligases, catalytic domain 21
P-loop containing nucleoside triphosphate hydrolases Nucleotide-diphospho-sugar transferases 22
Histidine-containing phosphotransfer domain, HPT domain ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 22
Ribosomal protein S5 domain 2-like DNA mismatch repair protein MutL 22
FAD-linked oxidases, C-terminal domain alpha-helical ferredoxin 22
Metalloproteases ("zincins"), catalytic domain PDZ domain-like 22
Nucleotidyltransferase Nucleotidyltransferase substrate binding subunit/domain 22
HSP40/DnaJ peptide-binding domain HSP40/DnaJ peptide-binding domain 22
6-phosphogluconate dehydrogenase C-terminal domain-like UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 21
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 22
Metal cation-transporting ATPase, ATP-binding domain N LysM domain 21
NAD(P)-binding Rossmann-fold domains ACT-like 22
Chemotaxis receptor methyltransferase CheR, N-terminal domain S-adenosyl-L-methionine-dependent methyltransferases 22
Glutathione synthetase ATP-binding domain-like Phosphohistidine domain 22
CoA-dependent acyltransferases Acetyl-CoA synthetase-like 22
tRNA-binding arm Class II aaRS and biotin synthetases 21
PYP-like sensor domain (PAS domain) PP2C-like 21
TrkA C-terminal domain-like TrkA C-terminal domain-like 22
DnaK suppressor protein DksA, alpha-hairpin domain Glucocorticoid receptor-like (DNA-binding domain) 21
MurE/MurF N-terminal domain MurD-like peptide ligases, peptide-binding domain 21
Mechanosensitive channel protein MscS (YggB), transmembrane region Sm-like ribonucleoproteins 22
DNA repair protein MutS, domain II DNA repair protein MutS, domain III 22
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Type II DNA topoisomerase 22
N-utilization substance G protein NusG, N-terminal domain Translation proteins SH3-like domain 21
GroEL equatorial domain-like GroEL apical domain-like 21
RuBisCO, large subunit, small (N-terminal) domain RuBisCo, C-terminal domain 21
ClpP/crotonase NAD(P)-binding Rossmann-fold domains 21
Nicotinate/Quinolinate PRTase N-terminal domain-like Nicotinate/Quinolinate PRTase C-terminal domain-like 21
Restriction endonuclease-like Zinc beta-ribbon 21
Phosphoenolpyruvate/pyruvate domain PK C-terminal domain-like 22
ThrRS/AlaRS common domain Class II aaRS and biotin synthetases 22
SMAD/FHA domain SMAD/FHA domain 22
NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains 22
Galactose mutarotase-like (Trans)glycosidases 22
Mechanosensitive channel protein MscS (YggB), transmembrane region Mechanosensitive channel protein MscS (YggB), C-terminal domain 22
Nucleic acid-binding proteins Translation proteins SH3-like domain 22
HCP-like TPR-like 22
Glutathione synthetase ATP-binding domain-like Acyl-CoA N-acyltransferases (Nat) 21
Nucleotide-diphospho-sugar transferases UDP-Glycosyltransferase/glycogen phosphorylase 22
Thioredoxin-like GST C-terminal domain-like 21
Hedgehog/intein (Hint) domain PFL-like glycyl radical enzymes 22
Actin-like ATPase domain Heat shock protein 70kD (HSP70), peptide-binding domain 22
HAMP domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 22
Succinyl-CoA synthetase domains Succinyl-CoA synthetase domains 21
FAD-binding/transporter-associated domain-like alpha-helical ferredoxin 22
HCP-like Caspase-like 22
Chaperone J-domain HSP40/DnaJ peptide-binding domain 22
DNA repair protein MutS, domain I P-loop containing nucleoside triphosphate hydrolases 22
GroEL-intermediate domain like GroEL apical domain-like 21
Hedgehog/intein (Hint) domain Homing endonucleases 22
Nucleotidyltransferase TGS-like 21
PFL-like glycyl radical enzymes Homing endonucleases 22
TGS-like ACT-like 21
Sm-like ribonucleoproteins Mechanosensitive channel protein MscS (YggB), C-terminal domain 22
Creatinase/prolidase N-terminal domain Creatinase/aminopeptidase 21
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 22
Ribokinase-like Nucleotidylyl transferase 21
Acetyl-CoA synthetase-like Glycerol-3-phosphate (1)-acyltransferase 22
Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 22
Translation proteins Ribosomal protein S5 domain 2-like 21
PFL-like glycyl radical enzymes PFL-like glycyl radical enzymes 22
S-adenosylmethionine synthetase S-adenosylmethionine synthetase 21
ClpP/crotonase 6-phosphogluconate dehydrogenase C-terminal domain-like 21
Ribosomal protein S5 domain 2-like Type II DNA topoisomerase 22
GAF domain-like GAF domain-like 21
PUA domain-like P-loop containing nucleoside triphosphate hydrolases 22
EF-G C-terminal domain-like Ribosomal protein S5 domain 2-like 21
GroEL equatorial domain-like GroEL-intermediate domain like 21
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase DNA mismatch repair protein MutL 22
Ribosome binding protein Y (YfiA homologue) Nucleic acid-binding proteins 21
DNA repair protein MutS, domain I DNA repair protein MutS, domain III 22
GAF domain-like Nucleotide cyclase 21
PK beta-barrel domain-like PK C-terminal domain-like 22
EAL domain-like HD-domain/PDEase-like 21
Nucleic acid-binding proteins P-loop containing nucleoside triphosphate hydrolases 22
LeuD/IlvD-like Aconitase iron-sulfur domain 22
6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 21
Cation efflux protein transmembrane domain-like Cation efflux protein cytoplasmic domain-like 21
Penicillin binding protein dimerisation domain beta-lactamase/transpeptidase-like 21
PUA domain-like Ribosomal protein S5 domain 2-like 22
P-loop containing nucleoside triphosphate hydrolases RecA protein, C-terminal domain 11
Nucleotidylyl transferase Alpha-L RNA-binding motif 11
Cobalamin (vitamin B12)-binding domain P-loop containing nucleoside triphosphate hydrolases 11
Ribosomal protein S5 domain 2-like HSP90 C-terminal domain 11
Aldolase Single hybrid motif 11
DnaJ/Hsp40 cysteine-rich domain HSP40/DnaJ peptide-binding domain 11
Translation proteins ThrRS/AlaRS common domain 11
Homodimeric domain of signal transducing histidine kinase Nucleotide cyclase 11
PRC-barrel domain PRC-barrel domain 11
NAD(P)-binding Rossmann-fold domains Siroheme synthase middle domains-like 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Alpha subunit of glutamate synthase, C-terminal domain 11
2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain Alkaline phosphatase-like 11
Aldolase AFP III-like domain 11
"Winged helix" DNA-binding domain "Winged helix" DNA-binding domain 11
Ribosomal protein S5 domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
Formate/glycerate dehydrogenase catalytic domain-like ACT-like 11
Histidine-containing phosphotransfer domain, HPT domain CheW-like 11
RuvA domain 2-like DNA helicase RuvA subunit, C-terminal domain 11
PurM C-terminal domain-like PurM C-terminal domain-like 11
Glutathione synthetase ATP-binding domain-like Glutathione synthetase ATP-binding domain-like 11
Rubredoxin-like Metallo-hydrolase/oxidoreductase 11
5' to 3' exonuclease, C-terminal subdomain DNA/RNA polymerases 11
EPT/RTPC-like EPT/RTPC-like 11
Class II aaRS and biotin synthetases Anticodon-binding domain of PheRS 11
GAF domain-like Phosphohistidine domain 11
Methylesterase CheB, C-terminal domain CheY-like 11
Methylesterase CheB, C-terminal domain PYP-like sensor domain (PAS domain) 11
Zinc beta-ribbon DNA primase DnaG, C-terminal domain 11
FMN-linked oxidoreductases Alpha subunit of glutamate synthase, C-terminal domain 11
Hedgehog/intein (Hint) domain Hedgehog/intein (Hint) domain 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
GreA transcript cleavage protein, N-terminal domain FKBP-like 11
Activating enzymes of the ubiquitin-like proteins FMN-dependent nitroreductase-like 11
Homocysteine S-methyltransferase Methionine synthase domain 11
S-adenosyl-L-methionine-dependent methyltransferases ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Adenine nucleotide alpha hydrolases-like MesJ substrate recognition domain-like 11
SMAD/FHA domain GAF domain-like 11
Calcium-dependent phosphotriesterase Carboxypeptidase regulatory domain-like 11
Aldolase post-HMGL domain-like 11
Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases 11
DNA ligase/mRNA capping enzyme, catalytic domain RuvA domain 2-like 11
WD40 repeat-like MetI-like 11
CheW-like CheY-like 11
MoeA N-terminal region -like Molybdenum cofactor biosynthesis proteins 11
Carbon-nitrogen hydrolase Adenine nucleotide alpha hydrolases-like 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases tRNA-binding arm 11
Class II aaRS and biotin synthetases Translation proteins 11
TSP type-3 repeat OmpA-like 11
Nucleic acid-binding proteins Rad51 N-terminal domain-like 11
alpha/beta-Hydrolases Galactose-binding domain-like 11
Ribonuclease H-like DNA/RNA polymerases 11
Nucleotidyltransferase substrate binding subunit/domain HD-domain/PDEase-like 11
Pre-protein crosslinking domain of SecA Helical scaffold and wing domains of SecA 11
Nucleotidylyl transferase tRNA-binding arm 11
Fe,Mn superoxide dismutase (SOD), N-terminal domain Fe,Mn superoxide dismutase (SOD), C-terminal domain 11
Tropomyosin Tropomyosin 11
Methylesterase CheB, C-terminal domain S-adenosyl-L-methionine-dependent methyltransferases 11
5' to 3' exonuclease, C-terminal subdomain Ribonuclease H-like 11
Class I glutamine amidotransferase-like Homeodomain-like 11
Formylmethanofuran:tetrahydromethanopterin formyltransferase Formylmethanofuran:tetrahydromethanopterin formyltransferase 11
PRTase-like PRTase-like 11
DPP6 N-terminal domain-like alpha/beta-Hydrolases 11
Chemotaxis receptor methyltransferase CheR, N-terminal domain CheY-like 11
Transcription factor NusA, N-terminal domain Prokaryotic type KH domain (KH-domain type II) 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) PRTase-like 11
Ribonuclease PH domain 2-like Nucleic acid-binding proteins 11
Thioredoxin-like Nqo1 FMN-binding domain-like 11
FAD/NAD(P)-binding domain Aminomethyltransferase beta-barrel domain 11
PreATP-grasp domain Methylglyoxal synthase-like 11
P-loop containing nucleoside triphosphate hydrolases Initiation factor IF2/eIF5b, domain 3 11
DNA ligase/mRNA capping enzyme, catalytic domain Nucleic acid-binding proteins 11
Elongation factor Ts (EF-Ts), dimerisation domain Elongation factor Ts (EF-Ts), dimerisation domain 11
HMA, heavy metal-associated domain HAD-like 11
Tryptophan synthase beta subunit-like PLP-dependent enzymes ACT-like 11
Aconitase B, N-terminal domain Aconitase iron-sulfur domain 11
Acetyl-CoA synthetase-like alpha/beta-Hydrolases 11
TerB-like Chaperone J-domain 11
ACP-like ACP-like 11
Nucleic acid-binding proteins Anticodon-binding domain of PheRS 11
Ribosomal L11/L12e N-terminal domain Ribosomal protein L11, C-terminal domain 11
PGBD-like C-type lectin-like 11
Thiol:disulfide interchange protein DsbD, N-terminal domain (DsbD-alpha) Thioredoxin-like 11
TGS-like ThrRS/AlaRS common domain 11
Chemotaxis receptor methyltransferase CheR, N-terminal domain ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
CheY-like CheY-like 11
P-loop containing nucleoside triphosphate hydrolases Acyl-CoA N-acyltransferases (Nat) 11
HAD-like Six-hairpin glycosidases 11
P-loop containing nucleoside triphosphate hydrolases S-adenosyl-L-methionine-dependent methyltransferases 11
RuvA domain 2-like RuvA domain 2-like 11
Barwin-like endoglucanases Sporulation related repeat 11
Adenine nucleotide alpha hydrolases-like PheT/TilS domain 11
Carbamate kinase-like PUA domain-like 11
MetI-like MetI-like 11
EreA/ChaN-like PDZ domain-like 11
YajQ-like YajQ-like 11
Translation proteins Initiation factor IF2/eIF5b, domain 3 11
Insert subdomain of RNA polymerase alpha subunit RBP11-like subunits of RNA polymerase 11
Ribosomal protein L6 Ribosomal protein L6 11
Obg GTP-binding protein N-terminal domain P-loop containing nucleoside triphosphate hydrolases 11
Carbamoyl phosphate synthetase, large subunit connection domain Methylglyoxal synthase-like 11
Carbamate kinase-like Acyl-CoA N-acyltransferases (Nat) 11
FAD-linked oxidoreductase ALDH-like 11
Prokaryotic type KH domain (KH-domain type II) Rad51 N-terminal domain-like 11
PurM N-terminal domain-like PurM N-terminal domain-like 11
Toll/Interleukin receptor TIR domain DEATH domain 11
Protein kinase-like (PK-like) P-loop containing nucleoside triphosphate hydrolases 11
Nucleotide-binding domain FAD-linked reductases, C-terminal domain 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases Nucleic acid-binding proteins 11
Chorismate mutase II Periplasmic binding protein-like II 11
PheT/TilS domain Putative DNA-binding domain 11
SMAD/FHA domain Homeodomain-like 11
HMA, heavy metal-associated domain Calcium ATPase, transmembrane domain M 11
cAMP-binding domain-like P-loop containing nucleoside triphosphate hydrolases 11
Class II aaRS and biotin synthetases Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) 11
Ribonuclease PH domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
Transcription factor NusA, N-terminal domain Nucleic acid-binding proteins 11
LysM domain LysM domain 11
FliG FliG 11
P-loop containing nucleoside triphosphate hydrolases CarD-like 11
S13-like H2TH domain Glucocorticoid receptor-like (DNA-binding domain) 11
UROD/MetE-like UROD/MetE-like 11
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex FAD/NAD(P)-binding domain 11
Lysozyme-like LysM domain 11
YhbC-like, N-terminal domain YhbC-like, C-terminal domain 11
Molybdenum cofactor biosynthesis proteins MoeA C-terminal domain-like 11
Dihydropteroate synthetase-like Methionine synthase activation domain-like 11
P-loop containing nucleoside triphosphate hydrolases lambda repressor-like DNA-binding domains 11
lambda repressor-like DNA-binding domains lambda repressor-like DNA-binding domains 11
Nitrite and sulphite reductase 4Fe-4S domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 11
(Trans)glycosidases Starch-binding domain-like 11
RBP11-like subunits of RNA polymerase C-terminal domain of RNA polymerase alpha subunit 11
Ribonuclease PH domain 2-like Ribonuclease PH domain 2-like 11
Thioredoxin-like Six-hairpin glycosidases 11
Metallo-hydrolase/oxidoreductase Rhodanese/Cell cycle control phosphatase 11
Homeodomain-like Homeodomain-like 11
Tex N-terminal region-like Ribonuclease H-like 11
Nucleotidylyl transferase Nucleic acid-binding proteins 11
Dihydropteroate synthetase-like Cobalamin (vitamin B12)-binding domain 11
S-adenosyl-L-methionine-dependent methyltransferases PYP-like sensor domain (PAS domain) 11
(Trans)glycosidases Protein kinase-like (PK-like) 11
GAF domain-like Phosphoenolpyruvate/pyruvate domain 11
Methylesterase CheB, C-terminal domain ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Putative DNA-binding domain Translation proteins 11
Glycosyl hydrolase domain Protein kinase-like (PK-like) 11
GAF domain-like Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain 11
HD-domain/PDEase-like Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
PPK N-terminal domain-like PHP14-like 11
Restriction endonuclease-like RuvA domain 2-like 11
Glutathione synthetase ATP-binding domain-like Carbamoyl phosphate synthetase, large subunit connection domain 11
Tex N-terminal region-like RuvA domain 2-like 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Nucleotidylyl transferase 11
MesJ substrate recognition domain-like PheT/TilS domain 11
Class I glutamine amidotransferase-like Adenine nucleotide alpha hydrolases-like 11
Nucleic acid-binding proteins PheT/TilS domain 11
Formyltransferase FMT C-terminal domain-like 11
EPT/RTPC-like RNA 3'-terminal phosphate cyclase, RPTC, insert domain 11
Homodimeric domain of signal transducing histidine kinase EAL domain-like 11
MoaD/ThiS Activating enzymes of the ubiquitin-like proteins 11
DNA polymerase beta, N-terminal domain-like Nucleotidyltransferase 11
Zn-dependent exopeptidases PDZ domain-like 11
Cryptochrome/photolyase, N-terminal domain Cryptochrome/photolyase FAD-binding domain 11
Tubulin nucleotide-binding domain-like Tubulin C-terminal domain-like 11
Carbamoyl phosphate synthetase, small subunit N-terminal domain Class I glutamine amidotransferase-like 11
Cytidine deaminase-like Dihydrofolate reductase-like 11
Thioredoxin-like Nqo1 middle domain-like 11
Class II aaRS and biotin synthetases C-terminal domain of transcriptional repressors 11
CheC-like Surface presentation of antigens (SPOA) 11
Aminopeptidase/glucanase lid domain Zn-dependent exopeptidases 11
PIN domain-like DNA/RNA polymerases 11
Nucleic acid-binding proteins GAD domain-like 11
Hsp33 domain HSP33 redox switch-like 11
R1 subunit of ribonucleotide reductase, N-terminal domain Hedgehog/intein (Hint) domain 11
Nudix Thiamin phosphate synthase 11
E set domains E set domains 11
Ribosomal protein S5 domain 2-like Nucleic acid-binding proteins 11
SMAD/FHA domain PP2C-like 11
Single hybrid motif FAD/NAD-linked reductases, dimerisation (C-terminal) domain 11
Zinc beta-ribbon DNA primase core 11
Cobalamin (vitamin B12)-binding domain Radical SAM enzymes 11
ClpP/crotonase ClpP/crotonase 11
Protein kinase-like (PK-like) PGBD-like 11
2Fe-2S ferredoxin-like alpha-helical ferredoxin 11
Ribosomal protein S5 domain 2-like GHMP Kinase, C-terminal domain 11
P-loop containing nucleoside triphosphate hydrolases MOP-like 11
Adenine nucleotide alpha hydrolases-like Argininosuccinate synthetase, C-terminal domain 11
Enolase N-terminal domain-like Enolase C-terminal domain-like 11
ValRS/IleRS/LeuRS editing domain tRNA-binding arm 11
Eukaryotic type KH-domain (KH-domain type I) Nucleic acid-binding proteins 11
dsRNA-binding domain-like Ribosomal protein S5 domain 2-like 11
CorA soluble domain-like Magnesium transport protein CorA, transmembrane region 11
Oxidoreductase molybdopterin-binding domain E set domains 11
Protein kinase-like (PK-like) C-type lectin-like 11
Translation initiation factor IF3, N-terminal domain Translation initiation factor IF3, C-terminal domain 11
Methylesterase CheB, C-terminal domain Chemotaxis receptor methyltransferase CheR, N-terminal domain 11
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 11
FMN-binding split barrel UbiD C-terminal domain-like 11
FAD/NAD(P)-binding domain FAD/NAD(P)-binding domain 11
Glutamyl tRNA-reductase catalytic, N-terminal domain Glutamyl tRNA-reductase dimerization domain 11
Methionine synthase domain Methionine synthase activation domain-like 11
Glutamine synthetase/guanido kinase CBS-domain pair 11
DNA methylase specificity domain GIY-YIG endonuclease 11
Glutathione synthetase ATP-binding domain-like Methylglyoxal synthase-like 11
Putative DNA-binding domain Anticodon-binding domain of PheRS 11
Metalloproteases ("zincins"), catalytic domain Zn-dependent exopeptidases 11
L9 N-domain-like Ribosomal protein L9 C-domain 11
Methylesterase CheB, C-terminal domain Homodimeric domain of signal transducing histidine kinase 11
PheT/TilS domain Class II aaRS and biotin synthetases 11
Aldolase TK C-terminal domain-like 11
P-loop containing nucleoside triphosphate hydrolases Helical scaffold and wing domains of SecA 11
Cupredoxins Cytochrome c 11
FGAM synthase PurL, linker domain PurM N-terminal domain-like 11
CheY-like GAF domain-like 11
Class I glutamine amidotransferase-like GMP synthetase C-terminal dimerisation domain 11
PIN domain-like Ribonuclease H-like 11
Galactose mutarotase-like Starch-binding domain-like 11
Putative DNA-binding domain P-loop containing nucleoside triphosphate hydrolases 11
Siroheme synthase middle domains-like Tetrapyrrole methylase 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) ThrRS/AlaRS common domain 11
P-loop containing nucleoside triphosphate hydrolases TRCF domain-like 11
Nucleic acid-binding proteins S-adenosyl-L-methionine-dependent methyltransferases 11
Galactose mutarotase-like Six-hairpin glycosidases 11
Ribonuclease H-like RuvA domain 2-like 11
"Winged helix" DNA-binding domain PLP-dependent transferases 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
Toll/Interleukin receptor TIR domain SMAD/FHA domain 11
L30e-like alpha/beta knot 11
NTF2-like Sec-C motif 11
Chelatase Chelatase 11
Calcium-dependent phosphotriesterase YVTN repeat-like/Quinoprotein amine dehydrogenase 11
vWA-like SMAD/FHA domain 11
Methylglyoxal synthase-like Cytidine deaminase-like 11
Nucleotidyltransferase PHP domain-like 11
Homocysteine S-methyltransferase Methionine synthase activation domain-like 11
Thioredoxin-like Nqo1C-terminal domain-like 11
NAD(P)-binding Rossmann-fold domains Glutamyl tRNA-reductase dimerization domain 11
Adenine nucleotide alpha hydrolases-like GMP synthetase C-terminal dimerisation domain 11
CBS-domain pair Inosine monophosphate dehydrogenase (IMPDH) 11
Prokaryotic type KH domain (KH-domain type II) Ribosomal protein S3 C-terminal domain 11
Rho N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 11
Glutathione synthetase ATP-binding domain-like Phosphoenolpyruvate/pyruvate domain 11
HAD-like Galactose mutarotase-like 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Nucleotide cyclase 11
Trigger factor ribosome-binding domain Triger factor/SurA peptide-binding domain-like 11
Ribosomal protein L7/12, oligomerisation (N-terminal) domain ClpS-like 11
Periplasmic binding protein-like II ACT-like 11
Bacterial fluorinating enzyme, N-terminal domain Bacterial fluorinating enzyme, C-terminal domain 11
Histidine-containing phosphotransfer domain, HPT domain Histidine-containing phosphotransfer domain, HPT domain 11
Cytochrome c oxidase subunit I-like Cytochrome c oxidase subunit III-like 11
Prim-pol domain P-loop containing nucleoside triphosphate hydrolases 11
Acetyl-CoA synthetase-like Acetyl-CoA synthetase-like 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase HSP90 C-terminal domain 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Nucleic acid-binding proteins 11
PheT/TilS domain Anticodon-binding domain of PheRS 11
YjeF N-terminal domain-like Ribokinase-like 11
Nucleic acid-binding proteins BRCT domain 11
P-loop containing nucleoside triphosphate hydrolases Class I glutamine amidotransferase-like 11
R1 subunit of ribonucleotide reductase, N-terminal domain Homing endonucleases 11
N-terminal domain of DnaB helicase P-loop containing nucleoside triphosphate hydrolases 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Nucleotidylyl transferase 11
CoA-dependent acyltransferases FAD/NAD-linked reductases, dimerisation (C-terminal) domain 11
Methylated DNA-protein cysteine methyltransferase domain Methylated DNA-protein cysteine methyltransferase, C-terminal domain 11
DNA polymerase beta, N-terminal domain-like PHP domain-like 11
Nucleic acid-binding proteins DNA helicase RuvA subunit, C-terminal domain 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) Translation proteins 11
P-loop containing nucleoside triphosphate hydrolases TrpR-like 11
ACP-like Glycerol-3-phosphate (1)-acyltransferase 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheW-like 11
FabD/lysophospholipase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 11
YbaK/ProRS associated domain Class II aaRS ABD-related 11
S-adenosyl-L-methionine-dependent methyltransferases CheY-like 11
CarD-like TRCF domain-like 11
P-loop containing nucleoside triphosphate hydrolases Smc hinge domain 11
Aminoacid dehydrogenase-like, N-terminal domain Isocitrate/Isopropylmalate dehydrogenase-like 11
Insert subdomain of RNA polymerase alpha subunit C-terminal domain of RNA polymerase alpha subunit 11
Glutamine synthetase/guanido kinase GatB/YqeY motif 11
PilZ domain-like Nucleotide cyclase 11
Homodimeric domain of signal transducing histidine kinase Histidine-containing phosphotransfer domain, HPT domain 11
PurS-like FGAM synthase PurL, linker domain 11
Carboxypeptidase regulatory domain-like YVTN repeat-like/Quinoprotein amine dehydrogenase 11
HD-domain/PDEase-like P-loop containing nucleoside triphosphate hydrolases 11
Rho N-terminal domain-like Nucleic acid-binding proteins 11
P-loop containing nucleoside triphosphate hydrolases UDP-Glycosyltransferase/glycogen phosphorylase 11
Chaperone J-domain DnaJ/Hsp40 cysteine-rich domain 11
GIY-YIG endonuclease C-terminal UvrC-binding domain of UvrB 11
P-loop containing nucleoside triphosphate hydrolases Signal peptide-binding domain 11
HMA, heavy metal-associated domain Calcium ATPase, transduction domain A 11
Pseudouridine synthase PUA domain-like 11
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex FAD/NAD-linked reductases, dimerisation (C-terminal) domain 11
HD-domain/PDEase-like CheY-like 11
HAD-like YcgL-like 11
PIN domain-like 5' to 3' exonuclease, C-terminal subdomain 11
Translation proteins Translation proteins 11
DNA primase core DNA primase DnaG, C-terminal domain 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) FMN-linked oxidoreductases 11
HMA, heavy metal-associated domain HMA, heavy metal-associated domain 11
Periplasmic binding protein-like II MetI-like 11
PPK N-terminal domain-like Phospholipase D/nuclease 11
P-loop containing nucleoside triphosphate hydrolases TPR-like 11
Terpenoid cyclases/Protein prenyltransferases Terpenoid cyclases/Protein prenyltransferases 11
Leukotriene A4 hydrolase N-terminal domain Metalloproteases ("zincins"), catalytic domain 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain ACT-like 11
S-adenosyl-L-methionine-dependent methyltransferases Putative methyltransferase TM0872, insert domain 11
Chemotaxis receptor methyltransferase CheR, N-terminal domain PYP-like sensor domain (PAS domain) 11
Tricorn protease N-terminal domain 3-carboxy-cis,cis-mucoante lactonizing enzyme 11
N-terminal domain of bifunctional PutA protein ALDH-like 11
P-loop containing nucleoside triphosphate hydrolases Hypothetical protein YjiA, C-terminal domain 11
Homocysteine S-methyltransferase Cobalamin (vitamin B12)-binding domain 11
Nucleotide-diphospho-sugar transferases RmlC-like cupins 11
Tex N-terminal region-like Nucleic acid-binding proteins 11
Nucleic acid-binding proteins Putative DNA-binding domain 11
Ferritin-like MCP/YpsA-like 11
Dihydropteroate synthetase-like Methionine synthase domain 11
Soluble quinoprotein glucose dehydrogenase Calcium-dependent phosphotriesterase 11
Chorismate mutase II ACT-like 11
P-loop containing nucleoside triphosphate hydrolases R3H domain 11
Aldolase 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 11
Acyl-CoA N-acyltransferases (Nat) Carbon-nitrogen hydrolase 11
Chemotaxis receptor methyltransferase CheR, N-terminal domain Homodimeric domain of signal transducing histidine kinase 11
Histidine-containing phosphotransfer domain, HPT domain Nucleotide cyclase 11
FAD/NAD(P)-binding domain HI0933 insert domain-like 11
PHP14-like Phospholipase D/nuclease 11
Nucleotide-binding domain Nucleotide-binding domain 11
RuvA domain 2-like BRCT domain 11
PurM C-terminal domain-like Class I glutamine amidotransferase-like 11
Cobalamin (vitamin B12)-binding domain Cobalamin (vitamin B12)-dependent enzymes 11
Trm112p-like Protein kinase-like (PK-like) 11
Coiled-coil domain of nucleotide exchange factor GrpE Head domain of nucleotide exchange factor GrpE 11
NusB-like S-adenosyl-L-methionine-dependent methyltransferases 11
Aconitase B, N-terminal domain LeuD/IlvD-like 11
HAD-like HAD-like 11
cAMP-binding domain-like cAMP-binding domain-like 11
Integrin alpha N-terminal domain PR-1-like 11
Glycoside hydrolase/deacetylase Families 57/38 glycoside transferase middle domain 11
"Winged helix" DNA-binding domain GAF domain-like 11
FGAM synthase PurL, linker domain PurM C-terminal domain-like 11
alpha-helical ferredoxin Nucleotide-binding domain 11
TrmE connector domain P-loop containing nucleoside triphosphate hydrolases 11
Nitrite/Sulfite reductase N-terminal domain-like Nitrite/Sulfite reductase N-terminal domain-like 11
DNase I-like Lamin A/C globular tail domain 11
Putative DNA-binding domain Cobalamin (vitamin B12)-binding domain 11
P-loop containing nucleoside triphosphate hydrolases Cobalamin (vitamin B12)-dependent enzymes 11
PRC-barrel domain EF-hand 11
P-loop containing nucleoside triphosphate hydrolases C-terminal UvrC-binding domain of UvrB 11
Nucleic acid-binding proteins Prokaryotic type KH domain (KH-domain type II) 11
C-terminal UvrC-binding domain of UvrB RuvA domain 2-like 11
Histidine-containing phosphotransfer domain, HPT domain EAL domain-like 11
DNA clamp DNA clamp 11
UBA-like Elongation factor Ts (EF-Ts), dimerisation domain 11
PreATP-grasp domain PreATP-grasp domain 11
IlvD/EDD N-terminal domain-like LeuD/IlvD-like 11
Aldolase Thiamin diphosphate-binding fold (THDP-binding) 11
Rhodanese/Cell cycle control phosphatase Activating enzymes of the ubiquitin-like proteins 11
Ribonuclease H-like Nucleic acid-binding proteins 11
Class II aaRS and biotin synthetases GAD domain-like 11
Methionine synthase domain Cobalamin (vitamin B12)-binding domain 11
beta-lactamase/transpeptidase-like Penicillin-binding protein associated domain 11
Glutamyl tRNA-reductase catalytic, N-terminal domain NAD(P)-binding Rossmann-fold domains 11
FMN-dependent nitroreductase-like FMN-dependent nitroreductase-like 11
P-loop containing nucleoside triphosphate hydrolases C-type lectin-like 11
DsbC/DsbG N-terminal domain-like Thioredoxin-like 11
PilZ domain-like EAL domain-like 11
YefM-like lambda repressor-like DNA-binding domains 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) SIS domain 11
RNase III domain-like dsRNA-binding domain-like 11
PreATP-grasp domain Carbamoyl phosphate synthetase, large subunit connection domain 11
NAD(P)-binding Rossmann-fold domains Isocitrate/Isopropylmalate dehydrogenase-like 11
Transcription factor NusA, N-terminal domain Rad51 N-terminal domain-like 11
"Winged helix" DNA-binding domain Nucleotidyltransferase 11
HD-domain/PDEase-like Nucleotide cyclase 11
N-terminal domain of MutM-like DNA repair proteins Glucocorticoid receptor-like (DNA-binding domain) 11
Acyl-CoA N-acyltransferases (Nat) Acyl-CoA N-acyltransferases (Nat) 11
PUA domain-like S-adenosyl-L-methionine-dependent methyltransferases 11
Nucleotide-binding domain Riboflavin synthase domain-like 11
NAD(P)-binding Rossmann-fold domains Tetrapyrrole methylase 11
Cupredoxins Nitrous oxide reductase, N-terminal domain 11
FAD-binding/transporter-associated domain-like Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain 11
TGS-like Class II aaRS ABD-related 11
DNA-glycosylase Nudix 11
PUA domain-like alpha/beta knot 11
CoA-dependent acyltransferases alpha/beta-Hydrolases 11
P-loop containing nucleoside triphosphate hydrolases Prokaryotic type KH domain (KH-domain type II) 11
post-HMGL domain-like Single hybrid motif 11
Nucleic acid-binding proteins ArfGap/RecO-like zinc finger 11
Actin-like ATPase domain HD-domain/PDEase-like 11
S-adenosyl-L-methionine-dependent methyltransferases Homodimeric domain of signal transducing histidine kinase 11
Nucleotidyltransferase substrate binding subunit/domain ACT-like 11
Domain of the SRP/SRP receptor G-proteins P-loop containing nucleoside triphosphate hydrolases 11
PurS-like Class I glutamine amidotransferase-like 11
ARM repeat Sec-C motif 11
RuvA domain 2-like JAB1/MPN domain 11
N-terminal domain of bifunctional PutA protein FAD-linked oxidoreductase 11
Nucleotidylyl transferase Riboflavin kinase-like 11
Class II aaRS and biotin synthetases YbaK/ProRS associated domain 11
N-terminal domain of MutM-like DNA repair proteins S13-like H2TH domain 11
Cobalamin (vitamin B12)-binding domain Methionine synthase activation domain-like 11
NagB/RpiA/CoA transferase-like D-ribose-5-phosphate isomerase (RpiA), lid domain 11
Acylphosphatase/BLUF domain-like YrdC/RibB 11
FAD-linked oxidases, C-terminal domain FAD-linked oxidases, C-terminal domain 11
Single hybrid motif FAD/NAD(P)-binding domain 11
Epsilon subunit of F1F0-ATP synthase N-terminal domain Epsilon subunit of F1F0-ATP synthase C-terminal domain 11
Homocysteine S-methyltransferase Dihydropteroate synthetase-like 11
Riboflavin synthase domain-like Riboflavin synthase domain-like 11
Phosphoenolpyruvate/pyruvate domain Nucleotide-diphospho-sugar transferases 11
ClpP/crotonase NfeD domain-like 11
Putative DNA-binding domain Initiation factor IF2/eIF5b, domain 3 11
Nitrite/Sulfite reductase N-terminal domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 11
Fe-S cluster assembly (FSCA) domain-like P-loop containing nucleoside triphosphate hydrolases 11
P-loop containing nucleoside triphosphate hydrolases TGS-like 11
ACP-like alpha/beta-Hydrolases 11
NAD(P)-binding Rossmann-fold domains LDH C-terminal domain-like 11
Nqo5-like HydB/Nqo4-like 11
Zn-dependent exopeptidases LysM domain 11
Carboxypeptidase regulatory domain-like Porins 11
Multidrug resistance efflux transporter EmrE Multidrug resistance efflux transporter EmrE 11
Prokaryotic type KH domain (KH-domain type II) Prokaryotic type KH domain (KH-domain type II) 11
Flavoproteins Ferredoxin reductase-like, C-terminal NADP-linked domain 11
PDZ domain-like ClpP/crotonase 11
MoaD/ThiS Rhodanese/Cell cycle control phosphatase 11
Homing endonucleases Homing endonucleases 11
HlyD-like secretion proteins HlyD-like secretion proteins 11
"Winged helix" DNA-binding domain S-adenosyl-L-methionine-dependent methyltransferases 11
PurS-like PurM C-terminal domain-like 11
P-loop containing nucleoside triphosphate hydrolases ARM repeat 11
Glycosyl hydrolase domain Starch-binding domain-like 11
Glucocorticoid receptor-like (DNA-binding domain) P-loop containing nucleoside triphosphate hydrolases 11
Periplasmic binding protein-like II Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain 11
MoeA N-terminal region -like MoeA C-terminal domain-like 11
R1 subunit of ribonucleotide reductase, N-terminal domain PFL-like glycyl radical enzymes 11
GAF domain-like PP2C-like 11
Glutamine synthetase, N-terminal domain Glutamine synthetase/guanido kinase 11
Nucleotidyltransferase Nucleotidyltransferase 11
Trigger factor ribosome-binding domain FKBP-like 11
FGAM synthase PurL, linker domain Class I glutamine amidotransferase-like 11
DNA ligase/mRNA capping enzyme, catalytic domain BRCT domain 11
NAD(P)-binding Rossmann-fold domains 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
Integrin alpha N-terminal domain Integrin alpha N-terminal domain 11
HAMP domain-like PYP-like sensor domain (PAS domain) 11
P-loop containing nucleoside triphosphate hydrolases Pre-protein crosslinking domain of SecA 11
YrdC/RibB RibA-like 11
Nitrous oxide reductase, N-terminal domain Nitrous oxide reductase, N-terminal domain 11
cAMP-binding domain-like ABC transporter transmembrane region 11
Homo-oligomeric flavin-containing Cys decarboxylases, HFCD CoaB-like 11
Putative DNA-binding domain Class II aaRS and biotin synthetases 11
PurM N-terminal domain-like Class I glutamine amidotransferase-like 11
Heat shock protein 70kD (HSP70), peptide-binding domain Heat shock protein 70kD (HSP70), C-terminal subdomain 11
Flavoproteins Riboflavin synthase domain-like 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase EAL domain-like 11
RuvA domain 2-like P-loop containing nucleoside triphosphate hydrolases 11
PurS-like PurM N-terminal domain-like 11
GIY-YIG endonuclease RuvA domain 2-like 11
Lysozyme-like beta-lactamase/transpeptidase-like 11
CoA-dependent acyltransferases FAD/NAD(P)-binding domain 11
Translation proteins PRC-barrel domain 11
TolB, N-terminal domain Tricorn protease N-terminal domain 11
UDP-Glycosyltransferase/glycogen phosphorylase Acyl-CoA N-acyltransferases (Nat) 11
FKBP-like FKBP-like 11
Transmembrane di-heme cytochromes a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 11
ThrRS/AlaRS common domain Class II aaRS ABD-related 11
Actin-like ATPase domain Heat shock protein 70kD (HSP70), C-terminal subdomain 11
S-adenosyl-L-methionine-dependent methyltransferases Protein kinase-like (PK-like) 11
Calcium-dependent phosphotriesterase Calcium-dependent phosphotriesterase 11
UDP-Glycosyltransferase/glycogen phosphorylase HAD-like 11
SMAD/FHA domain P-loop containing nucleoside triphosphate hydrolases 11
Nqo1 FMN-binding domain-like alpha-helical ferredoxin 11
TGS-like Class II aaRS and biotin synthetases 11
lambda integrase-like, N-terminal domain DNA breaking-rejoining enzymes 11
Nucleotidyltransferase substrate binding subunit/domain Nucleotidyltransferase substrate binding subunit/domain 11
Macro domain-like Zn-dependent exopeptidases 11
FAD/NAD(P)-binding domain Folate-binding domain 11
Rad51 N-terminal domain-like Rad51 N-terminal domain-like 11
Thioredoxin-like TPR-like 11

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