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Domain combination pairs in Mycoplasma crocodyli MP145

All pairs of domain combinations at the superfamily level are listed here.
The identification of domain pairs does not account for the possibility of non-contiguous domains. Inserted, or interlaced, domains are seen as having a simple pair ordering.

  • For a list of unique full length architectures for this genome click here (can be slow).
Adjacent domain pairs graph

Graph of adjacent domain pairs.


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Domain combination pairs

199 domain combination pairs.
Click on a column heading to sort that column, or the 'View' button to see domain architetures for that domain pair combination.

Superfamily (N) Superfamily (C) Number of occurrances Number unique
P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases 74
ABC transporter transmembrane region P-loop containing nucleoside triphosphate hydrolases 61
Galactose-binding domain-like Galactose-binding domain-like 65
Nucleotidylyl transferase Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 55
Homeodomain-like SIS domain 41
Actin-like ATPase domain Actin-like ATPase domain 41
beta-N-acetylhexosaminidase-like domain (Trans)glycosidases 32
N-terminal domain of alpha and beta subunits of F1 ATP synthase P-loop containing nucleoside triphosphate hydrolases 31
Nucleic acid-binding proteins Class II aaRS and biotin synthetases 32
P-loop containing nucleoside triphosphate hydrolases C-terminal domain of alpha and beta subunits of F1 ATP synthase 31
Class II aaRS and biotin synthetases Class II aaRS ABD-related 33
Alpha-L RNA-binding motif Pseudouridine synthase 31
P-loop containing nucleoside triphosphate hydrolases Translation proteins 33
N-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase 31
Galactose-binding domain-like beta-N-acetylhexosaminidase-like domain 32
Galactose-binding domain-like (Trans)glycosidases 32
P-loop containing nucleoside triphosphate hydrolases MOP-like 32
Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) 22
Formate/glycerate dehydrogenase catalytic domain-like NAD(P)-binding Rossmann-fold domains 21
ValRS/IleRS/LeuRS editing domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 22
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Type II DNA topoisomerase 21
Ribosomal protein S5 domain 2-like Type II DNA topoisomerase 21
P-loop containing nucleoside triphosphate hydrolases Ribosomal protein S5 domain 2-like 22
Thiamin diphosphate-binding fold (THDP-binding) TK C-terminal domain-like 22
Nucleic acid-binding proteins Nucleic acid-binding proteins 22
Translation proteins SH3-like domain Nucleic acid-binding proteins 22
tRNA-binding arm Class II aaRS and biotin synthetases 21
ThrRS/AlaRS common domain Class II aaRS and biotin synthetases 22
Domain of the SRP/SRP receptor G-proteins P-loop containing nucleoside triphosphate hydrolases 22
Type II DNA topoisomerase GyrA/ParC C-terminal domain-like 22
RuvA domain 2-like Nucleic acid-binding proteins 22
Aminopeptidase/glucanase lid domain Zn-dependent exopeptidases 21
FAD/NAD(P)-binding domain FAD/NAD-linked reductases, dimerisation (C-terminal) domain 22
L30e-like alpha/beta knot 21
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Ribosomal protein S5 domain 2-like 21
ValRS/IleRS/LeuRS editing domain Nucleotidylyl transferase 22
P-loop containing nucleoside triphosphate hydrolases post-AAA+ oligomerization domain-like 22
Glucose permease domain IIB Duplicated hybrid motif 22
FKBP-like Coiled-coil domain of nucleotide exchange factor GrpE 11
Ribosomal L11/L12e N-terminal domain Ribosomal protein L11, C-terminal domain 11
Putative DNA-binding domain Class II aaRS and biotin synthetases 11
MgtE N-terminal domain-like CBS-domain pair 11
NAD(P)-binding Rossmann-fold domains 6-phosphogluconate dehydrogenase C-terminal domain-like 11
P-loop containing nucleoside triphosphate hydrolases Obg GTP-binding protein C-terminal domain 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) Translation proteins 11
Phosphoglucomutase, first 3 domains Phosphoglucomutase, C-terminal domain 11
Class II aaRS and biotin synthetases C-terminal domain of ProRS 11
Composite domain of metallo-dependent hydrolases Metallo-dependent hydrolases 11
PheT/TilS domain Putative DNA-binding domain 11
Single hybrid motif FAD/NAD(P)-binding domain 11
Class II aaRS and biotin synthetases Translation proteins 11
L9 N-domain-like Ribosomal protein L9 C-domain 11
DNA ligase/mRNA capping enzyme, catalytic domain BRCT domain 11
Trigger factor ribosome-binding domain Triger factor/SurA peptide-binding domain-like 11
PIN domain-like 5' to 3' exonuclease, C-terminal subdomain 11
DeoB insert domain-like Alkaline phosphatase-like 11
GreA transcript cleavage protein, N-terminal domain FKBP-like 11
Formyltransferase FMT C-terminal domain-like 11
Metal cation-transporting ATPase, ATP-binding domain N HAD-like 11
DnaJ/Hsp40 cysteine-rich domain HSP40/DnaJ peptide-binding domain 11
Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain 11
DNA clamp DNA clamp 11
P-loop containing nucleoside triphosphate hydrolases Helical scaffold and wing domains of SecA 11
P-loop containing nucleoside triphosphate hydrolases Prokaryotic type KH domain (KH-domain type II) 11
Nucleotidylyl transferase HD-domain/PDEase-like 11
Translation proteins EF-G C-terminal domain-like 11
Phosphoglucomutase, first 3 domains Phosphoglucomutase, first 3 domains 11
Enolase N-terminal domain-like Enolase C-terminal domain-like 11
S-adenosylmethionine synthetase S-adenosylmethionine synthetase 11
PK beta-barrel domain-like PK C-terminal domain-like 11
DNA/RNA polymerases Lesion bypass DNA polymerase (Y-family), little finger domain 11
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Pyrimidine nucleoside phosphorylase C-terminal domain 11
ThrRS/AlaRS common domain Class II aaRS ABD-related 11
S13-like H2TH domain Glucocorticoid receptor-like (DNA-binding domain) 11
HSP40/DnaJ peptide-binding domain HSP40/DnaJ peptide-binding domain 11
Ribosomal protein L7/12, oligomerisation (N-terminal) domain ClpS-like 11
(Trans)glycosidases Hyaluronidase post-catalytic domain-like 11
N-utilization substance G protein NusG, N-terminal domain Translation proteins SH3-like domain 11
Nucleic acid-binding proteins BRCT domain 11
Domain of the SRP/SRP receptor G-proteins Signal peptide-binding domain 11
P-loop containing nucleoside triphosphate hydrolases Pre-protein crosslinking domain of SecA 11
P-loop containing nucleoside triphosphate hydrolases TrpR-like 11
Calcium ATPase, transduction domain A Metal cation-transporting ATPase, ATP-binding domain N 11
Translation proteins ThrRS/AlaRS common domain 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Nucleotidylyl transferase 11
P-loop containing nucleoside triphosphate hydrolases Signal peptide-binding domain 11
P-loop containing nucleoside triphosphate hydrolases FtsH protease domain-like 11
2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain Alkaline phosphatase-like 11
Translation initiation factor IF3, N-terminal domain Translation initiation factor IF3, C-terminal domain 11
Phospholipase D/nuclease Phospholipase D/nuclease 11
Ribonuclease H-like RuvA domain 2-like 11
P-loop containing nucleoside triphosphate hydrolases EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 11
P-loop containing nucleoside triphosphate hydrolases Initiation factor IF2/eIF5b, domain 3 11
"Winged helix" DNA-binding domain GAF domain-like 11
Calcium ATPase, transduction domain A Calcium ATPase, transmembrane domain M 11
P-loop containing nucleoside triphosphate hydrolases Glucocorticoid receptor-like (DNA-binding domain) 11
Phosphoenolpyruvate/pyruvate domain PK C-terminal domain-like 11
Tubulin nucleotide-binding domain-like Tubulin C-terminal domain-like 11
RuvA domain 2-like RuvA domain 2-like 11
Zinc beta-ribbon DNA primase core 11
Nicotinate/Quinolinate PRTase N-terminal domain-like Nicotinate/Quinolinate PRTase C-terminal domain-like 11
Prokaryotic type KH domain (KH-domain type II) Ribosomal protein S3 C-terminal domain 11
Insert subdomain of RNA polymerase alpha subunit RBP11-like subunits of RNA polymerase 11
THUMP domain-like Adenine nucleotide alpha hydrolases-like 11
Pre-protein crosslinking domain of SecA Helical scaffold and wing domains of SecA 11
Chaperone J-domain HSP40/DnaJ peptide-binding domain 11
Aminoacid dehydrogenase-like, N-terminal domain NAD(P)-binding Rossmann-fold domains 11
Translation proteins EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 11
Obg GTP-binding protein N-terminal domain P-loop containing nucleoside triphosphate hydrolases 11
Nucleic acid-binding proteins S-adenosyl-L-methionine-dependent methyltransferases 11
dsRNA-binding domain-like Ribosomal protein S5 domain 2-like 11
Translation proteins Ribosomal protein S5 domain 2-like 11
Sigma2 domain of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 11
Prokaryotic type KH domain (KH-domain type II) Prokaryotic type KH domain (KH-domain type II) 11
Nucleic acid-binding proteins Putative DNA-binding domain 11
Class II aaRS and biotin synthetases SufE/NifU 11
Phosphohistidine domain Phosphoenolpyruvate/pyruvate domain 11
MgtE N-terminal domain-like MgtE membrane domain-like 11
Protein kinase-like (PK-like) Protein kinase-like (PK-like) 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) ThrRS/AlaRS common domain 11
Translation proteins Translation proteins 11
Nucleotidylyl transferase tRNA-binding arm 11
CBS-domain pair MgtE membrane domain-like 11
UBA-like Elongation factor Ts (EF-Ts), dimerisation domain 11
P-loop containing nucleoside triphosphate hydrolases "Winged helix" DNA-binding domain 11
Tex N-terminal region-like RuvA domain 2-like 11
NAD(P)-binding Rossmann-fold domains Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 11
FKBP-like Triger factor/SurA peptide-binding domain-like 11
Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain Pyrimidine nucleoside phosphorylase C-terminal domain 11
Chaperone J-domain DnaJ/Hsp40 cysteine-rich domain 11
RNase III domain-like dsRNA-binding domain-like 11
PheT/TilS domain Class II aaRS and biotin synthetases 11
Nucleotide-binding domain FAD-linked reductases, C-terminal domain 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphohistidine domain 11
N-terminal domain of DnaB helicase P-loop containing nucleoside triphosphate hydrolases 11
DNA ligase/mRNA capping enzyme, catalytic domain RuvA domain 2-like 11
Metallo-dependent phosphatases 5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain 11
lambda repressor-like DNA-binding domains Periplasmic binding protein-like I 11
Class II aaRS ABD-related C-terminal domain of ProRS 11
Metal cation-transporting ATPase, ATP-binding domain N Calcium ATPase, transmembrane domain M 11
Tex N-terminal region-like Ribonuclease H-like 11
Trigger factor ribosome-binding domain FKBP-like 11
Coiled-coil domain of nucleotide exchange factor GrpE Head domain of nucleotide exchange factor GrpE 11
ValRS/IleRS/LeuRS editing domain tRNA-binding arm 11
Translation proteins Initiation factor IF2/eIF5b, domain 3 11
Hyaluronidase post-catalytic domain-like Galactose-binding domain-like 11
N-terminal domain of MutM-like DNA repair proteins S13-like H2TH domain 11
Single hybrid motif FAD/NAD-linked reductases, dimerisation (C-terminal) domain 11
Galactose mutarotase-like Six-hairpin glycosidases 11
P-loop containing nucleoside triphosphate hydrolases Class I glutamine amidotransferase-like 11
PK beta-barrel domain-like Phosphoenolpyruvate/pyruvate domain 11
Nucleotidylyl transferase Alpha-L RNA-binding motif 11
FKBP-like Head domain of nucleotide exchange factor GrpE 11
Elongation factor Ts (EF-Ts), dimerisation domain Elongation factor Ts (EF-Ts), dimerisation domain 11
beta-N-acetylhexosaminidase-like domain Hyaluronidase post-catalytic domain-like 11
P-loop containing nucleoside triphosphate hydrolases C-terminal UvrC-binding domain of UvrB 11
"Winged helix" DNA-binding domain "Winged helix" DNA-binding domain 11
MetI-like MetI-like 11
N-terminal domain of MutM-like DNA repair proteins Glucocorticoid receptor-like (DNA-binding domain) 11
Ribonuclease H-like Nucleic acid-binding proteins 11
Glutamine synthetase/guanido kinase GatB/YqeY motif 11
Nucleotide-diphospho-sugar transferases Calcium ATPase, transmembrane domain M 11
Tex N-terminal region-like Nucleic acid-binding proteins 11
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphoenolpyruvate/pyruvate domain 11
RBP11-like subunits of RNA polymerase C-terminal domain of RNA polymerase alpha subunit 11
MalF N-terminal region-like MetI-like 11
HAD-like Calcium ATPase, transmembrane domain M 11
Obg GTP-binding protein N-terminal domain Obg GTP-binding protein C-terminal domain 11
HprK N-terminal domain-like PEP carboxykinase-like 11
Insert subdomain of RNA polymerase alpha subunit C-terminal domain of RNA polymerase alpha subunit 11
E set domains (Trans)glycosidases 11
Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 11
EF-G C-terminal domain-like EF-G C-terminal domain-like 11
DNA methylase specificity domain DNA methylase specificity domain 11
Ribosomal protein L6 Ribosomal protein L6 11
Nucleic acid-binding proteins PheT/TilS domain 11
GroES-like NAD(P)-binding Rossmann-fold domains 11
NAD(P)-binding Rossmann-fold domains TrkA C-terminal domain-like 11
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex CoA-dependent acyltransferases 11
EF-G C-terminal domain-like Ribosomal protein S5 domain 2-like 11
R1 subunit of ribonucleotide reductase, N-terminal domain PFL-like glycyl radical enzymes 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases tRNA-binding arm 11
P-loop containing nucleoside triphosphate hydrolases EF-G C-terminal domain-like 11
P-loop containing nucleoside triphosphate hydrolases Smc hinge domain 11
S-adenosyl-L-methionine-dependent methyltransferases Putative methyltransferase TM0872, insert domain 11
Restriction endonuclease-like Restriction endonuclease-like 11
Nucleotidylyl transferase An anticodon-binding domain of class I aminoacyl-tRNA synthetases 11
RuvA domain 2-like BRCT domain 11
Transcription factor NusA, N-terminal domain Prokaryotic type KH domain (KH-domain type II) 11
P-loop containing nucleoside triphosphate hydrolases RecA protein, C-terminal domain 11
Class II aaRS and biotin synthetases Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) 11
Calcium ATPase, transduction domain A HAD-like 11
Chondroitin AC/alginate lyase Galactose mutarotase-like 11
GIY-YIG endonuclease RuvA domain 2-like 11
Macro domain-like Zn-dependent exopeptidases 11
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 11
P-loop containing nucleoside triphosphate hydrolases TGS-like 11
DNA ligase/mRNA capping enzyme, catalytic domain Nucleic acid-binding proteins 11

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