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Domain combination pairs in Burkholderia gladioli BSR3

All pairs of domain combinations at the superfamily level are listed here.
The identification of domain pairs does not account for the possibility of non-contiguous domains. Inserted, or interlaced, domains are seen as having a simple pair ordering.

  • For a list of unique full length architectures for this genome click here (can be slow).
Adjacent domain pairs graph

Graph of adjacent domain pairs.


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Domain combination pairs

865 domain combination pairs.
Click on a column heading to sort that column, or the 'View' button to see domain architetures for that domain pair combination.

Superfamily (N) Superfamily (C) Number of occurrances Number unique
"Winged helix" DNA-binding domain Periplasmic binding protein-like II 2162
Homodimeric domain of signal transducing histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 5724
Homeodomain-like Homeodomain-like 509
P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases 4717
Homeodomain-like Tetracyclin repressor-like, C-terminal domain 413
CheY-like C-terminal effector domain of the bipartite response regulators 385
NAD(P)-binding Rossmann-fold domains GroES-like 334
NAD(P)-binding Rossmann-fold domains 6-phosphogluconate dehydrogenase C-terminal domain-like 306
"Winged helix" DNA-binding domain GntR ligand-binding domain-like 263
Acyl-CoA dehydrogenase NM domain-like Acyl-CoA dehydrogenase C-terminal domain-like 233
"Winged helix" DNA-binding domain GAF domain-like 231
Multidrug resistance efflux transporter EmrE Multidrug resistance efflux transporter EmrE 222
Thioredoxin-like GST C-terminal domain-like 221
Sigma2 domain of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 225
Thiolase-like Thiolase-like 217
P-loop containing nucleoside triphosphate hydrolases Homeodomain-like 2110
"Winged helix" DNA-binding domain Dimeric alpha+beta barrel 201
Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) 208
Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain 197
Composite domain of metallo-dependent hydrolases Metallo-dependent hydrolases 198
Actin-like ATPase domain Actin-like ATPase domain 196
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 186
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 186
CoA-dependent acyltransferases ACP-like 1818
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 186
FAD/NAD(P)-binding domain FAD-linked reductases, C-terminal domain 185
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB transmembrane domain 186
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB transmembrane domain 186
ACP-like ACP-like 1717
NAD(P)-binding Rossmann-fold domains Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 174
"Winged helix" DNA-binding domain PLP-dependent transferases 173
Acetyl-CoA synthetase-like ACP-like 1717
CoA-dependent acyltransferases CoA-dependent acyltransferases 1717
lambda repressor-like DNA-binding domains Periplasmic binding protein-like I 161
CoA-dependent acyltransferases Acetyl-CoA synthetase-like 1616
Zn-dependent exopeptidases Bacterial exopeptidase dimerisation domain 151
ParB/Sulfiredoxin KorB DNA-binding domain-like 152
ABC transporter transmembrane region P-loop containing nucleoside triphosphate hydrolases 153
PYP-like sensor domain (PAS domain) ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 1513
CheY-like Homeodomain-like 146
CheY-like P-loop containing nucleoside triphosphate hydrolases 146
Class I glutamine amidotransferase-like Homeodomain-like 141
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheY-like 1411
Formate/glycerate dehydrogenase catalytic domain-like NAD(P)-binding Rossmann-fold domains 131
Phage tail proteins Phage tail proteins 136
Phage tail proteins gp5 N-terminal domain-like 136
Homodimeric domain of signal transducing histidine kinase CheY-like 1310
PYP-like sensor domain (PAS domain) Homodimeric domain of signal transducing histidine kinase 1312
P-loop containing nucleoside triphosphate hydrolases MOP-like 132
ACP-like Thiolase-like 1211
Riboflavin synthase domain-like Ferredoxin reductase-like, C-terminal NADP-linked domain 117
Cytochrome c Cytochrome c 118
RmlC-like cupins Homeodomain-like 113
Enolase N-terminal domain-like Enolase C-terminal domain-like 111
Aminoacid dehydrogenase-like, N-terminal domain NAD(P)-binding Rossmann-fold domains 112
Regulatory protein AraC Homeodomain-like 113
ACP-like NAD(P)-binding Rossmann-fold domains 1010
PreATP-grasp domain Glutathione synthetase ATP-binding domain-like 105
Thiolase-like NAD(P)-binding Rossmann-fold domains 1010
NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains 1010
lambda repressor-like DNA-binding domains RmlC-like cupins 101
Acetyl-CoA synthetase-like Acetyl-CoA synthetase-like 1010
FabD/lysophospholipase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 94
PYP-like sensor domain (PAS domain) PYP-like sensor domain (PAS domain) 98
Thiamin diphosphate-binding fold (THDP-binding) DHS-like NAD/FAD-binding domain 91
ISP domain Bet v1-like 91
P-loop containing nucleoside triphosphate hydrolases Translation proteins 95
FAD/NAD(P)-binding domain FAD/NAD-linked reductases, dimerisation (C-terminal) domain 94
HlyD-like secretion proteins HlyD-like secretion proteins 93
cAMP-binding domain-like "Winged helix" DNA-binding domain 93
FAD-binding/transporter-associated domain-like FAD-linked oxidases, C-terminal domain 94
Nucleotidylyl transferase Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 85
ACP-like S-adenosyl-L-methionine-dependent methyltransferases 88
Ferredoxin reductase-like, C-terminal NADP-linked domain 2Fe-2S ferredoxin-like 84
Nucleotide cyclase EAL domain-like 85
Glutathione synthetase ATP-binding domain-like Rudiment single hybrid motif 84
Homeodomain-like SIS domain 82
ACP-like alpha/beta-Hydrolases 88
Riboflavin synthase domain-like 2Fe-2S ferredoxin-like 84
gp5 N-terminal domain-like Phage fibre proteins 85
Phage tail proteins Phage fibre proteins 74
PreATP-grasp domain Rudiment single hybrid motif 73
Pheromone-binding domain of LuxR-like quorum-sensing transcription factors C-terminal effector domain of the bipartite response regulators 73
FAD/NAD(P)-binding domain FAD/NAD(P)-binding domain 75
HAMP domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 73
Formate dehydrogenase/DMSO reductase, domains 1-3 ADC-like 74
Thiolase-like S-adenosyl-L-methionine-dependent methyltransferases 77
(Trans)glycosidases Glycosyl hydrolase domain 77
CoA-dependent acyltransferases alpha/beta-Hydrolases 77
Adhesin YadA, collagen-binding domain Pili subunits 76
NAD(P)-binding Rossmann-fold domains S-adenosyl-L-methionine-dependent methyltransferases 77
Acetyl-CoA synthetase-like alpha/beta-Hydrolases 77
"Winged helix" DNA-binding domain Chorismate lyase-like 71
Adhesin YadA, collagen-binding domain Adhesin YadA, collagen-binding domain 76
E set domains (Trans)glycosidases 66
"Winged helix" DNA-binding domain NagB/RpiA/CoA transferase-like 61
IlvD/EDD N-terminal domain-like LeuD/IlvD-like 61
Triger factor/SurA peptide-binding domain-like FKBP-like 66
MurD-like peptide ligases, catalytic domain MurD-like peptide ligases, peptide-binding domain 63
HAMP domain-like Homodimeric domain of signal transducing histidine kinase 62
P-loop containing nucleoside triphosphate hydrolases Ribosomal protein S5 domain 2-like 65
TPR-like TPR-like 65
Thiamin diphosphate-binding fold (THDP-binding) TK C-terminal domain-like 63
PurM N-terminal domain-like PurM C-terminal domain-like 62
Lysozyme-like beta-lactamase/transpeptidase-like 63
Double Clp-N motif P-loop containing nucleoside triphosphate hydrolases 52
Calcium ATPase, transduction domain A Calcium ATPase, transmembrane domain M 54
FabD/lysophospholipase-like ACP-like 54
HAD-like Calcium ATPase, transmembrane domain M 54
PYP-like sensor domain (PAS domain) CheY-like 55
PYP-like sensor domain (PAS domain) Nucleotide cyclase 54
"Winged helix" DNA-binding domain "Winged helix" DNA-binding domain 54
Calcium ATPase, transduction domain A HAD-like 54
Thiolase-like FabD/lysophospholipase-like 54
Phospholipase D/nuclease Phospholipase D/nuclease 54
GAF domain-like Homodimeric domain of signal transducing histidine kinase 55
GAF domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 55
Alpha-L RNA-binding motif Pseudouridine synthase 53
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Ribosomal protein S5 domain 2-like 44
CoA-dependent acyltransferases S-adenosyl-L-methionine-dependent methyltransferases 44
P-loop containing nucleoside triphosphate hydrolases "Winged helix" DNA-binding domain 43
PLP-binding barrel Alanine racemase C-terminal domain-like 42
MetI-like MetI-like 41
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Histidine-containing phosphotransfer domain, HPT domain 44
ACT-like ACT-like 43
Mechanosensitive channel protein MscS (YggB), transmembrane region Mechanosensitive channel protein MscS (YggB), C-terminal domain 42
"Winged helix" DNA-binding domain S-adenosyl-L-methionine-dependent methyltransferases 43
Phosphohistidine domain Phosphoenolpyruvate/pyruvate domain 44
Translation proteins EF-G C-terminal domain-like 42
EF-G C-terminal domain-like EF-G C-terminal domain-like 42
NagB/RpiA/CoA transferase-like NagB/RpiA/CoA transferase-like 42
Homeodomain-like Ribonuclease H-like 42
Translation proteins EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 42
Nucleotide-diphospho-sugar transferases RmlC-like cupins 42
PapD-like Periplasmic chaperone C-domain 42
Adenine nucleotide alpha hydrolases-like Adenine nucleotide alpha hydrolases-like 41
2Fe-2S ferredoxin-like CO dehydrogenase ISP C-domain like 43
Mechanosensitive channel protein MscS (YggB), transmembrane region Sm-like ribonucleoproteins 42
P-loop containing nucleoside triphosphate hydrolases GAF domain-like 43
Penicillin binding protein dimerisation domain beta-lactamase/transpeptidase-like 42
PYP-like sensor domain (PAS domain) EAL domain-like 43
P-loop containing nucleoside triphosphate hydrolases EF-G C-terminal domain-like 42
P-loop containing nucleoside triphosphate hydrolases EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 42
Class II aaRS and biotin synthetases Class II aaRS ABD-related 43
Sm-like ribonucleoproteins Mechanosensitive channel protein MscS (YggB), C-terminal domain 42
LeuD/IlvD-like Aconitase iron-sulfur domain 42
Nitrite/Sulfite reductase N-terminal domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 42
PH0987 N-terminal domain-like Cyclophilin-like 42
DNA ligase/mRNA capping enzyme, catalytic domain Nucleic acid-binding proteins 44
Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like 42
(Trans)glycosidases Galactose-binding domain-like 44
TPR-like UDP-Glycosyltransferase/glycogen phosphorylase 42
alpha/beta-Hydrolases alpha/beta-Hydrolases 31
Nucleic acid-binding proteins RuvA domain 2-like 33
Nucleic acid-binding proteins P-loop containing nucleoside triphosphate hydrolases 33
PYP-like sensor domain (PAS domain) C-terminal effector domain of the bipartite response regulators 32
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphoenolpyruvate/pyruvate domain 33
Ribosomal protein S5 domain 2-like EF-G C-terminal domain-like 32
Probable ACP-binding domain of malonyl-CoA ACP transacylase NAD(P)-binding Rossmann-fold domains 33
Protease propeptides/inhibitors Subtilisin-like 32
CheY-like CheY-like 33
Galactose-binding domain-like beta-Galactosidase/glucuronidase domain 33
CoA-dependent acyltransferases Thiolase-like 33
Calcium ATPase, transduction domain A Metal cation-transporting ATPase, ATP-binding domain N 32
Aspartate receptor, ligand-binding domain Methyl-accepting chemotaxis protein (MCP) signaling domain 32
Metal cation-transporting ATPase, ATP-binding domain N Calcium ATPase, transmembrane domain M 32
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 33
Trypsin-like serine proteases PDZ domain-like 32
Acetyl-CoA synthetase-like S-adenosyl-L-methionine-dependent methyltransferases 33
Sensory domain-like Methyl-accepting chemotaxis protein (MCP) signaling domain 32
NAD(P)-binding Rossmann-fold domains Isocitrate/Isopropylmalate dehydrogenase-like 31
Folate-binding domain Aminomethyltransferase beta-barrel domain 33
Nitrite and sulphite reductase 4Fe-4S domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 31
PYP-like sensor domain (PAS domain) P-loop containing nucleoside triphosphate hydrolases 33
GroEL-intermediate domain like GroEL apical domain-like 31
MetI-like P-loop containing nucleoside triphosphate hydrolases 33
PDZ domain-like PDZ domain-like 32
FMN-linked oxidoreductases FAD/NAD(P)-binding domain 32
ThrRS/AlaRS common domain Class II aaRS and biotin synthetases 32
Nucleic acid-binding proteins Class II aaRS and biotin synthetases 33
Metal cation-transporting ATPase, ATP-binding domain N HAD-like 32
PYP-like sensor domain (PAS domain) Homeodomain-like 33
Probable ACP-binding domain of malonyl-CoA ACP transacylase ACP-like 33
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex CoA-dependent acyltransferases 33
FabD/lysophospholipase-like NAD(P)-binding Rossmann-fold domains 33
GroEL equatorial domain-like GroEL-intermediate domain like 31
Methylated DNA-protein cysteine methyltransferase domain Methylated DNA-protein cysteine methyltransferase, C-terminal domain 32
Aminoacid dehydrogenase-like, N-terminal domain Isocitrate/Isopropylmalate dehydrogenase-like 31
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 33
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 32
6-phosphogluconate dehydrogenase C-terminal domain-like ClpP/crotonase 32
Thiolase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 33
NAD(P)-binding Rossmann-fold domains ClpP/crotonase 32
Nucleotidyltransferase HD-domain/PDEase-like 32
6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 32
alpha/beta-Hydrolases Galactose-binding domain-like 32
Thioredoxin-like Thioredoxin-like 32
Translation proteins ThrRS/AlaRS common domain 32
MurCD N-terminal domain MurD-like peptide ligases, catalytic domain 31
MurCD N-terminal domain MurD-like peptide ligases, peptide-binding domain 31
Galactose-binding domain-like Galactose-binding domain-like 32
Pectin lyase-like Pectin lyase-like 33
Nucleic acid-binding proteins Nucleic acid-binding proteins 33
HD-domain/PDEase-like ACT-like 32
Cytochrome c oxidase subunit II-like, transmembrane region Cupredoxins 33
Acyl-CoA N-acyltransferases (Nat) NAD(P)-binding Rossmann-fold domains 33
ValRS/IleRS/LeuRS editing domain Nucleotidylyl transferase 32
GroEL equatorial domain-like GroEL apical domain-like 31
Adenine nucleotide alpha hydrolases-like DHS-like NAD/FAD-binding domain 31
Nitrite/Sulfite reductase N-terminal domain-like Nitrite/Sulfite reductase N-terminal domain-like 31
beta-Galactosidase/glucuronidase domain (Trans)glycosidases 33
E set domains Glycosyl hydrolase domain 33
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphohistidine domain 33
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 31
Single hybrid motif Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 33
P-loop containing nucleoside triphosphate hydrolases post-AAA+ oligomerization domain-like 32
ValRS/IleRS/LeuRS editing domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 32
Nucleotidyltransferase ACT-like 32
CBS-domain pair FAD-binding/transporter-associated domain-like 31
Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases 32
Single hybrid motif CoA-dependent acyltransferases 33
Fe,Mn superoxide dismutase (SOD), N-terminal domain Fe,Mn superoxide dismutase (SOD), C-terminal domain 32
CoA-dependent acyltransferases NAD(P)-binding Rossmann-fold domains 33
Aspartate/glutamate racemase Aspartate/glutamate racemase 32
CO dehydrogenase molybdoprotein N-domain-like Molybdenum cofactor-binding domain 32
P-loop containing nucleoside triphosphate hydrolases Class I glutamine amidotransferase-like 31
Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 32
GAF domain-like PYP-like sensor domain (PAS domain) 33
Acyl-CoA N-acyltransferases (Nat) Thiolase-like 33
Nqo1 middle domain-like Nqo1C-terminal domain-like 22
N-terminal domain of alpha and beta subunits of F1 ATP synthase P-loop containing nucleoside triphosphate hydrolases 21
HAMP domain-like PYP-like sensor domain (PAS domain) 22
Molybdenum cofactor-binding domain Molybdenum cofactor-binding domain 22
N-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase 21
HD-domain/PDEase-like TGS-like 21
ThrRS/AlaRS common domain Class II aaRS ABD-related 21
EspE N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 22
"Winged helix" DNA-binding domain NAD(P)-binding Rossmann-fold domains 22
CheY-like Histidine-containing phosphotransfer domain, HPT domain 22
P-loop containing nucleoside triphosphate hydrolases CBS-domain pair 21
YgfB-like Sec-C motif 21
FAD/NAD(P)-binding domain Folate-binding domain 22
Nqo1 FMN-binding domain-like Nqo1 middle domain-like 22
Nucleotide-binding domain FAD/NAD(P)-binding domain 21
NAD(P)-binding Rossmann-fold domains Succinyl-CoA synthetase domains 22
FabD/lysophospholipase-like S-adenosyl-L-methionine-dependent methyltransferases 22
Nqo1 FMN-binding domain-like Nqo1C-terminal domain-like 22
Adenine nucleotide alpha hydrolases-like Argininosuccinate synthetase, C-terminal domain 21
NAD(P)-binding Rossmann-fold domains LDH C-terminal domain-like 21
alpha-helical ferredoxin Nucleotide-binding domain 22
Thiolase-like GroES-like 22
GreA transcript cleavage protein, N-terminal domain FKBP-like 21
FMN-linked oxidoreductases Nucleotide-binding domain 21
beta-Galactosidase/glucuronidase domain beta-Galactosidase/glucuronidase domain 22
(Trans)glycosidases Carbohydrate binding domain 22
Aldolase post-HMGL domain-like 22
Acetyl-CoA synthetase-like Thiolase-like 22
HPr-like Phosphohistidine domain 22
CheW-like CheY-like 22
S-adenosyl-L-methionine-dependent methyltransferases TPR-like 22
Clc chloride channel CBS-domain pair 21
TGS-like Class II aaRS and biotin synthetases 21
2Fe-2S ferredoxin-like 4Fe-4S ferredoxins 22
HPr-like Phosphoenolpyruvate/pyruvate domain 22
Pectin lyase-like Autotransporter 22
CoA-transferase family III (CaiB/BaiF) CoA-transferase family III (CaiB/BaiF) 21
Thiolase-like PLP-dependent transferases 22
Rhodanese/Cell cycle control phosphatase Rhodanese/Cell cycle control phosphatase 22
Cupredoxins Cytochrome c 22
Ribosomal protein S5 domain 2-like Type II DNA topoisomerase 22
Thiamin diphosphate-binding fold (THDP-binding) Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 22
TGS-like ACT-like 21
Actin-like ATPase domain Heat shock protein 70kD (HSP70), C-terminal subdomain 22
Heat shock protein 70kD (HSP70), peptide-binding domain Heat shock protein 70kD (HSP70), C-terminal subdomain 22
Origin of replication-binding domain, RBD-like P-loop containing nucleoside triphosphate hydrolases 21
Translation proteins Ribosomal protein S5 domain 2-like 21
Type II DNA topoisomerase GyrA/ParC C-terminal domain-like 21
FAD-binding/transporter-associated domain-like alpha-helical ferredoxin 22
P-loop containing nucleoside triphosphate hydrolases C-terminal domain of alpha and beta subunits of F1 ATP synthase 21
HMA, heavy metal-associated domain Calcium ATPase, transmembrane domain M 22
Acetyl-CoA synthetase-like NAD(P)-binding Rossmann-fold domains 22
P-loop containing nucleoside triphosphate hydrolases Restriction endonuclease-like 22
Cytidine deaminase-like Dihydrofolate reductase-like 21
Glutamine synthetase, N-terminal domain Glutamine synthetase/guanido kinase 21
GAF domain-like Homeodomain-like 21
Nucleotidyltransferase TGS-like 21
TGS-like Class II aaRS ABD-related 21
ACT-like Formyltransferase 21
Acyl-CoA N-acyltransferases (Nat) PLP-dependent transferases 22
P-loop containing nucleoside triphosphate hydrolases ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 22
MoeA N-terminal region -like MoeA C-terminal domain-like 21
S-adenosyl-L-methionine-dependent methyltransferases GroES-like 22
FAD-linked oxidases, C-terminal domain alpha-helical ferredoxin 22
Glutathione synthetase ATP-binding domain-like Single hybrid motif 22
Acyl-CoA N-acyltransferases (Nat) ACP-like 22
FAD/NAD(P)-binding domain alpha/beta-Hydrolases 21
Nucleotidyltransferase Nucleotidyltransferase substrate binding subunit/domain 22
2Fe-2S ferredoxin-like Formate dehydrogenase/DMSO reductase, domains 1-3 22
P-loop containing nucleoside triphosphate hydrolases Homodimeric domain of signal transducing histidine kinase 22
Leukotriene A4 hydrolase N-terminal domain Metalloproteases ("zincins"), catalytic domain 21
Rudiment single hybrid motif Single hybrid motif 22
Nicotinate/Quinolinate PRTase N-terminal domain-like Nicotinate/Quinolinate PRTase C-terminal domain-like 21
Chemotaxis receptor methyltransferase CheR, N-terminal domain S-adenosyl-L-methionine-dependent methyltransferases 21
lambda repressor-like DNA-binding domains Cyanase C-terminal domain 21
DsbC/DsbG N-terminal domain-like Thioredoxin-like 22
Terpenoid cyclases/Protein prenyltransferases Terpenoid cyclases/Protein prenyltransferases 22
HPr-like Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain 22
C-terminal effector domain of the bipartite response regulators P-loop containing nucleoside triphosphate hydrolases 21
4'-phosphopantetheinyl transferase 4'-phosphopantetheinyl transferase 22
Molybdenum cofactor biosynthesis proteins MoeA C-terminal domain-like 21
GroES-like ACP-like 22
NAD(P)-binding Rossmann-fold domains UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 22
EAL domain-like Sensory domain-like 21
S-adenosyl-L-methionine-dependent methyltransferases alpha/beta-Hydrolases 22
Nucleotidyltransferase Poly A polymerase C-terminal region-like 21
TGS-like ThrRS/AlaRS common domain 21
lambda integrase-like, N-terminal domain DNA breaking-rejoining enzymes 22
CorA soluble domain-like Magnesium transport protein CorA, transmembrane region 21
PreATP-grasp domain Single hybrid motif 22
ACP-like Thioesterase/thiol ester dehydrase-isomerase 22
Resolvase-like Homeodomain-like 21
4Fe-4S ferredoxins Formate dehydrogenase/DMSO reductase, domains 1-3 22
Creatinase/prolidase N-terminal domain Creatinase/aminopeptidase 22
tRNA-binding arm Class II aaRS and biotin synthetases 21
2Fe-2S ferredoxin-like alpha-helical ferredoxin 21
Protein kinase-like (PK-like) P-loop containing nucleoside triphosphate hydrolases 22
Thioredoxin-like FAD/NAD(P)-binding domain 21
Nucleic acid-binding proteins Translation proteins SH3-like domain 22
HMA, heavy metal-associated domain HAD-like 22
GAF domain-like Nucleotide cyclase 22
P-loop containing nucleoside triphosphate hydrolases FtsH protease domain-like 21
Ribonuclease H-like DNA/RNA polymerases 22
FAD/NAD(P)-binding domain Aminomethyltransferase beta-barrel domain 22
Tryptophan synthase beta subunit-like PLP-dependent enzymes ACT-like 21
Thioesterase/thiol ester dehydrase-isomerase NAD(P)-binding Rossmann-fold domains 22
"Winged helix" DNA-binding domain Acyl-CoA N-acyltransferases (Nat) 22
L30e-like alpha/beta knot 21
Ribosomal protein S5 domain 2-like Ribonuclease PH domain 2-like 22
Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 22
Formyltransferase FMT C-terminal domain-like 21
Probable ACP-binding domain of malonyl-CoA ACP transacylase S-adenosyl-L-methionine-dependent methyltransferases 22
MoeA N-terminal region -like Molybdenum cofactor biosynthesis proteins 21
GAF domain-like CheY-like 22
beta-N-acetylhexosaminidase-like domain (Trans)glycosidases 22
Phosphoglucomutase, first 3 domains Phosphoglucomutase, C-terminal domain 21
Thiolase-like Thioesterase/thiol ester dehydrase-isomerase 22
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheW-like 22
CheY-like Methylesterase CheB, C-terminal domain 21
HMA, heavy metal-associated domain Calcium ATPase, transduction domain A 22
P-loop containing nucleoside triphosphate hydrolases Hypothetical protein YjiA, C-terminal domain 21
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Type II DNA topoisomerase 22
MurE/MurF N-terminal domain MurD-like peptide ligases, catalytic domain 21
Homodimeric domain of signal transducing histidine kinase Histidine-containing phosphotransfer domain, HPT domain 22
Phosphoglucomutase, first 3 domains Phosphoglucomutase, first 3 domains 21
Actin-like ATPase domain Heat shock protein 70kD (HSP70), peptide-binding domain 22
Thioesterase/thiol ester dehydrase-isomerase S-adenosyl-L-methionine-dependent methyltransferases 22
MurE/MurF N-terminal domain MurD-like peptide ligases, peptide-binding domain 21
Histidine-containing phosphotransfer domain, HPT domain CheW-like 22
6-phosphogluconate dehydrogenase C-terminal domain-like UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 22
FAD-binding/transporter-associated domain-like CO dehydrogenase flavoprotein C-terminal domain-like 22
PYP-like sensor domain (PAS domain) Methyl-accepting chemotaxis protein (MCP) signaling domain 21
FGAM synthase PurL, linker domain Class I glutamine amidotransferase-like 11
Ribonuclease PH domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
DNA breaking-rejoining enzymes Homeodomain-like 11
Transcription factor NusA, N-terminal domain Prokaryotic type KH domain (KH-domain type II) 11
Trigger factor ribosome-binding domain FKBP-like 11
FAD/NAD(P)-binding domain HI0933 insert domain-like 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) ThrRS/AlaRS common domain 11
Glutathione synthetase ATP-binding domain-like Cyclophilin-like 11
FGAM synthase PurL, linker domain PurM N-terminal domain-like 11
Subtilisin-like Pectin lyase-like 11
P-loop containing nucleoside triphosphate hydrolases TGS-like 11
Trypsin-like serine proteases Trypsin-like serine proteases 11
Protein kinase-like (PK-like) ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
HMA, heavy metal-associated domain HMA, heavy metal-associated domain 11
PIN domain-like 5' to 3' exonuclease, C-terminal subdomain 11
Class I glutamine amidotransferase-like Glycosyl hydrolase domain 11
Nucleotidyltransferase Nucleotidyltransferase 11
PIN domain-like Ribonuclease H-like 11
Phage fibre proteins alpha/beta-Hydrolases 11
FAD/NAD(P)-binding domain Nitrite/Sulfite reductase N-terminal domain-like 11
Dihydropteroate synthetase-like Methionine synthase activation domain-like 11
N-utilization substance G protein NusG, N-terminal domain Translation proteins SH3-like domain 11
P-loop containing nucleoside triphosphate hydrolases Hedgehog/intein (Hint) domain 11
Nucleic acid-binding proteins Prokaryotic type KH domain (KH-domain type II) 11
Transcription factor NusA, N-terminal domain Rad51 N-terminal domain-like 11
Glutamyl tRNA-reductase catalytic, N-terminal domain NAD(P)-binding Rossmann-fold domains 11
Fumarylacetoacetate hydrolase, FAH, N-terminal domain FAH 11
Formate dehydrogenase/DMSO reductase, domains 1-3 Riboflavin synthase domain-like 11
SIS domain CBS-domain pair 11
ADC-like Riboflavin synthase domain-like 11
Putative DNA-binding domain Translation proteins 11
PTS system IIB component-like PTS system IIB component-like 11
Phase 1 flagellin Phase 1 flagellin 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase HSP90 C-terminal domain 11
P-loop containing nucleoside triphosphate hydrolases Smc hinge domain 11
TolB, N-terminal domain Tricorn protease N-terminal domain 11
PLP-dependent transferases Ornithine decarboxylase C-terminal domain 11
Actin-like ATPase domain SIS domain 11
P-loop containing nucleoside triphosphate hydrolases CarD-like 11
Phoshotransferase/anion transport protein Phosphohistidine domain 11
P-loop containing nucleoside triphosphate hydrolases ARM repeat 11
ACP-like MbtH-like 11
EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain "Winged helix" DNA-binding domain 11
Class II aaRS and biotin synthetases GAD domain-like 11
Succinyl-CoA synthetase domains Succinyl-CoA synthetase domains 11
P-loop containing nucleoside triphosphate hydrolases Initiation factor IF2/eIF5b, domain 3 11
PreATP-grasp domain Cyclophilin-like 11
PurM C-terminal domain-like PurM C-terminal domain-like 11
Cryptochrome/photolyase, N-terminal domain Cryptochrome/photolyase FAD-binding domain 11
SirA-like UROD/MetE-like 11
Carbamate kinase-like PUA domain-like 11
Cyclophilin-like Cyclophilin-like 11
Glutathione synthetase ATP-binding domain-like Succinyl-CoA synthetase domains 11
CO dehydrogenase ISP C-domain like FAD-binding/transporter-associated domain-like 11
Actin-like ATPase domain HD-domain/PDEase-like 11
Rho N-terminal domain-like Nucleic acid-binding proteins 11
Rudiment single hybrid motif Cyclophilin-like 11
Transmembrane di-heme cytochromes a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 11
Cytochrome c OmpA-like 11
Sigma2 domain of RNA polymerase sigma factors NTF2-like 11
DNA ligase/mRNA capping enzyme, catalytic domain RuvA domain 2-like 11
N-terminal domain of DnaB helicase P-loop containing nucleoside triphosphate hydrolases 11
Prokaryotic type KH domain (KH-domain type II) Ribosomal protein S3 C-terminal domain 11
Cytochrome c oxidase subunit I-like Cytochrome c oxidase subunit III-like 11
TrmE connector domain P-loop containing nucleoside triphosphate hydrolases 11
DAK1/DegV-like DhaL-like 11
Acetyl-CoA synthetase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 11
DNA repair protein MutS, domain I P-loop containing nucleoside triphosphate hydrolases 11
Galactose mutarotase-like (Trans)glycosidases 11
PYP-like sensor domain (PAS domain) PP2C-like 11
DNA repair protein MutS, domain III P-loop containing nucleoside triphosphate hydrolases 11
FabD/lysophospholipase-like CoA-dependent acyltransferases 11
Nucleic acid-binding proteins PheT/TilS domain 11
Tex N-terminal region-like RuvA domain 2-like 11
N-terminal domain of MutM-like DNA repair proteins Glucocorticoid receptor-like (DNA-binding domain) 11
Prokaryotic type KH domain (KH-domain type II) Prokaryotic type KH domain (KH-domain type II) 11
Ribosomal protein S5 domain 2-like GHMP Kinase, C-terminal domain 11
YWTD domain Calcium-dependent phosphotriesterase 11
L9 N-domain-like Ribosomal protein L9 C-domain 11
Chorismate mutase II Periplasmic binding protein-like II 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Nucleotidylyl transferase 11
YjeF N-terminal domain-like Ribokinase-like 11
C-terminal effector domain of the bipartite response regulators C-terminal effector domain of the bipartite response regulators 11
Dihydropteroate synthetase-like Cobalamin (vitamin B12)-binding domain 11
P-loop containing nucleoside triphosphate hydrolases Homing endonucleases 11
FAD-linked oxidoreductase ALDH-like 11
"Winged helix" DNA-binding domain Thioesterase/thiol ester dehydrase-isomerase 11
Carbohydrate-binding domain E set domains 11
LigB-like LigA subunit of an aromatic-ring-opening dioxygenase LigAB 11
Ada DNA repair protein, N-terminal domain (N-Ada 10) Homeodomain-like 11
Eukaryotic type KH-domain (KH-domain type I) Nucleic acid-binding proteins 11
Nucleotide-diphospho-sugar transferases PilZ domain-like 11
HSP40/DnaJ peptide-binding domain HSP40/DnaJ peptide-binding domain 11
Homodimeric domain of signal transducing histidine kinase Homodimeric domain of signal transducing histidine kinase 11
C-terminal UvrC-binding domain of UvrB RuvA domain 2-like 11
Class II aaRS and biotin synthetases Translation proteins 11
dsRNA-binding domain-like Ribosomal protein S5 domain 2-like 11
PrpR receptor domain-like Homeodomain-like 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Nucleic acid-binding proteins 11
HD-domain/PDEase-like C-terminal effector domain of the bipartite response regulators 11
Chaperone J-domain DnaJ/Hsp40 cysteine-rich domain 11
(Trans)glycosidases Beta-D-glucan exohydrolase, C-terminal domain 11
Thioesterase/thiol ester dehydrase-isomerase Thioesterase/thiol ester dehydrase-isomerase 11
FAD-linked reductases, C-terminal domain Folate-binding domain 11
PheT/TilS domain Class II aaRS and biotin synthetases 11
N-terminal domain of bifunctional PutA protein FAD-linked oxidoreductase 11
5' to 3' exonuclease, C-terminal subdomain Ribonuclease H-like 11
Galactose-binding domain-like Immunoglobulin 11
LysM domain Duplicated hybrid motif 11
TrkA C-terminal domain-like TrkA C-terminal domain-like 11
P-loop containing nucleoside triphosphate hydrolases HRDC-like 11
Nucleic acid-binding proteins BRCT domain 11
P-loop containing nucleoside triphosphate hydrolases Prokaryotic type KH domain (KH-domain type II) 11
Periplasmic binding protein-like II Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain 11
Translation proteins "Winged helix" DNA-binding domain 11
FMN-binding split barrel UbiD C-terminal domain-like 11
P-loop containing nucleoside triphosphate hydrolases TRCF domain-like 11
Glutathione synthetase ATP-binding domain-like Phosphohistidine domain 11
UDP-Glycosyltransferase/glycogen phosphorylase UDP-Glycosyltransferase/glycogen phosphorylase 11
PurM N-terminal domain-like Class I glutamine amidotransferase-like 11
Putative DNA-binding domain GAF domain-like 11
DNA ligase/mRNA capping enzyme, catalytic domain BRCT domain 11
beta-Galactosidase/glucuronidase domain Immunoglobulin 11
Glutathione synthetase ATP-binding domain-like Phosphoenolpyruvate/pyruvate domain 11
Thioredoxin-like TPR-like 11
CheY-binding domain of CheA ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain ACT-like 11
MFS general substrate transporter Glycerol-3-phosphate (1)-acyltransferase 11
Peptidase/esterase 'gauge' domain alpha/beta-Hydrolases 11
Adenine nucleotide alpha hydrolases-like GMP synthetase C-terminal dimerisation domain 11
Lysozyme-like LysM domain 11
Putative DNA-binding domain Anticodon-binding domain of PheRS 11
Sensory domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Adenine nucleotide alpha hydrolases-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Flavoproteins Ferredoxin reductase-like, C-terminal NADP-linked domain 11
Heme-dependent peroxidases Heme-dependent peroxidases 11
Putative DNA-binding domain P-loop containing nucleoside triphosphate hydrolases 11
Ribbon-helix-helix FAD-linked oxidoreductase 11
NusB-like S-adenosyl-L-methionine-dependent methyltransferases 11
Pre-protein crosslinking domain of SecA Helical scaffold and wing domains of SecA 11
Translation proteins PRC-barrel domain 11
Pili subunits GspK insert domain-like 11
Class I glutamine amidotransferase-like GMP synthetase C-terminal dimerisation domain 11
Insert subdomain of RNA polymerase alpha subunit RBP11-like subunits of RNA polymerase 11
S-adenosyl-L-methionine-dependent methyltransferases S-adenosyl-L-methionine-dependent methyltransferases 11
CheY-binding domain of CheA CheW-like 11
Nucleotidylyl transferase Riboflavin kinase-like 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Nucleotidylyl transferase 11
Nucleic acid-binding proteins S-adenosyl-L-methionine-dependent methyltransferases 11
Nucleotidylyl transferase Nudix 11
TATA-box binding protein-like DNA-glycosylase 11
Phosphoenolpyruvate/pyruvate domain PK C-terminal domain-like 11
E set domains E set domains 11
Radical SAM enzymes RuvA domain 2-like 11
PLP-dependent transferases PLP-dependent transferases 11
Acid phosphatase/Vanadium-dependent haloperoxidase Pectin lyase-like 11
Sensory domain-like Homodimeric domain of signal transducing histidine kinase 11
Oxidoreductase molybdopterin-binding domain E set domains 11
FMN-dependent nitroreductase-like FMN-dependent nitroreductase-like 11
S-adenosyl-L-methionine-dependent methyltransferases Putative methyltransferase TM0872, insert domain 11
ADC-like Ferredoxin reductase-like, C-terminal NADP-linked domain 11
Phoshotransferase/anion transport protein Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain 11
NAD(P)-binding Rossmann-fold domains ACT-like 11
E set domains Carbohydrate binding domain 11
ARM repeat ARM repeat 11
PPK N-terminal domain-like Phospholipase D/nuclease 11
5' to 3' exonuclease, C-terminal subdomain DNA/RNA polymerases 11
ADC synthase D-aminoacid aminotransferase-like PLP-dependent enzymes 11
HAMP domain-like EAL domain-like 11
NAD(P)-binding Rossmann-fold domains 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
P-loop containing nucleoside triphosphate hydrolases Adenine nucleotide alpha hydrolases-like 11
FliG FliG 11
PH0987 N-terminal domain-like Single hybrid motif 11
Translation proteins Initiation factor IF2/eIF5b, domain 3 11
Protein prenylyltransferase TPR-like 11
Xylose isomerase-like Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 11
PK beta-barrel domain-like PK C-terminal domain-like 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
GIY-YIG endonuclease C-terminal UvrC-binding domain of UvrB 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
Glutathione synthetase ATP-binding domain-like Methylglyoxal synthase-like 11
Duplicated hybrid motif Phosphoenolpyruvate/pyruvate domain 11
RBP11-like subunits of RNA polymerase C-terminal domain of RNA polymerase alpha subunit 11
PPK N-terminal domain-like PHP14-like 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase DNA mismatch repair protein MutL 11
Nucleic acid-binding proteins GAD domain-like 11
Tubulin nucleotide-binding domain-like Tubulin C-terminal domain-like 11
P-loop containing nucleoside triphosphate hydrolases Helical scaffold and wing domains of SecA 11
N-terminal domain of bifunctional PutA protein ALDH-like 11
Ada DNA repair protein, N-terminal domain (N-Ada 10) Methylated DNA-protein cysteine methyltransferase domain 11
DeoB insert domain-like Alkaline phosphatase-like 11
EAL domain-like HD-domain/PDEase-like 11
Calcium-dependent phosphotriesterase NHL repeat 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain II 11
Adenine nucleotide alpha hydrolases-like Homodimeric domain of signal transducing histidine kinase 11
YrdC/RibB RibA-like 11
CheC-like Surface presentation of antigens (SPOA) 11
3-carboxy-cis,cis-mucoante lactonizing enzyme YVTN repeat-like/Quinoprotein amine dehydrogenase 11
Tex N-terminal region-like Ribonuclease H-like 11
Urease metallochaperone UreE, N-terminal domain Urease metallochaperone UreE, C-terminal domain 11
Molybdenum cofactor-binding domain Cytochrome c 11
CheY-like Nucleotide cyclase 11
DNA repair protein MutS, domain II P-loop containing nucleoside triphosphate hydrolases 11
Rad51 N-terminal domain-like Rad51 N-terminal domain-like 11
Class I glutamine amidotransferase-like Adenine nucleotide alpha hydrolases-like 11
Ribosomal protein S5 domain 2-like HSP90 C-terminal domain 11
Carbohydrate binding domain Lysozyme-like 11
NAD(P)-binding Rossmann-fold domains TrkA C-terminal domain-like 11
PheT/TilS domain Putative DNA-binding domain 11
ACP-like Tautomerase/MIF 11
Sm-like ribonucleoproteins cAMP-binding domain-like 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Adenine nucleotide alpha hydrolases-like 11
Nucleotidyltransferase substrate binding subunit/domain ACT-like 11
MFS general substrate transporter Carbon-nitrogen hydrolase 11
Translation proteins Translation proteins 11
S-adenosyl-L-methionine-dependent methyltransferases Nucleotide-diphospho-sugar transferases 11
ACP-like PLP-dependent transferases 11
Acetyl-CoA synthetase-like Tautomerase/MIF 11
Probable ACP-binding domain of malonyl-CoA ACP transacylase GroES-like 11
RuvA domain 2-like MCP/YpsA-like 11
Glycosyl hydrolase domain Protein kinase-like (PK-like) 11
HAMP domain-like Nucleotide cyclase 11
Homeodomain-like Methylated DNA-protein cysteine methyltransferase, C-terminal domain 11
CbiG N-terminal domain-like Tetrapyrrole methylase 11
Putative DNA-binding domain Citrate synthase 11
Chaperone J-domain HSP40/DnaJ peptide-binding domain 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
(Trans)glycosidases Protein kinase-like (PK-like) 11
Cation efflux protein transmembrane domain-like Cation efflux protein cytoplasmic domain-like 11
Purple acid phosphatase, N-terminal domain Metallo-dependent phosphatases 11
S-adenosylmethionine synthetase S-adenosylmethionine synthetase 11
Nucleic acid-binding proteins Anticodon-binding domain of PheRS 11
CheY-binding domain of CheA Homodimeric domain of signal transducing histidine kinase 11
Glycosyl hydrolase domain Galactose-binding domain-like 11
Formate dehydrogenase/DMSO reductase, domains 1-3 Ferredoxin reductase-like, C-terminal NADP-linked domain 11
Nucleic acid-binding proteins Rad51 N-terminal domain-like 11
GAF domain-like GAF domain-like 11
FabD/lysophospholipase-like GroES-like 11
ABC transporter transmembrane region CheY-like 11
"Winged helix" DNA-binding domain LexA/Signal peptidase 11
L domain-like Protein kinase-like (PK-like) 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Galactose-binding domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Domain of the SRP/SRP receptor G-proteins P-loop containing nucleoside triphosphate hydrolases 11
Tricorn protease domain 2 alpha/beta-Hydrolases 11
Histidine-containing phosphotransfer domain, HPT domain CheY-binding domain of CheA 11
FGAM synthase PurL, linker domain PurM C-terminal domain-like 11
S13-like H2TH domain Glucocorticoid receptor-like (DNA-binding domain) 11
E set domains Chitinase insertion domain 11
NAD(P)-binding Rossmann-fold domains PLP-dependent transferases 11
NagB/RpiA/CoA transferase-like alpha-helical ferredoxin 11
ValRS/IleRS/LeuRS editing domain tRNA-binding arm 11
GIY-YIG endonuclease RuvA domain 2-like 11
PIN domain-like DNA/RNA polymerases 11
Globin-like Riboflavin synthase domain-like 11
DNA clamp DNA clamp 11
PurS-like PurM C-terminal domain-like 11
MesJ substrate recognition domain-like PheT/TilS domain 11
Acetyl-CoA synthetase-like FabD/lysophospholipase-like 11
PreATP-grasp domain Methylglyoxal synthase-like 11
Nucleotide-diphospho-sugar transferases Trimeric LpxA-like enzymes 11
2Fe-2S ferredoxin-like ADC-like 11
Cobalamin (vitamin B12)-binding domain Methionine synthase activation domain-like 11
(Trans)glycosidases Chitinase insertion domain 11
Adenine nucleotide alpha hydrolases-like MesJ substrate recognition domain-like 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) Translation proteins 11
P-loop containing nucleoside triphosphate hydrolases C-terminal UvrC-binding domain of UvrB 11
PreATP-grasp domain PreATP-grasp domain 11
RuvA domain 2-like RuvA domain 2-like 11
Methionine synthase domain Cobalamin (vitamin B12)-binding domain 11
CO dehydrogenase ISP C-domain like CO dehydrogenase flavoprotein C-terminal domain-like 11
FMN-linked oxidoreductases Alpha subunit of glutamate synthase, C-terminal domain 11
NAD-binding domain of HMG-CoA reductase Substrate-binding domain of HMG-CoA reductase 11
Ribbon-helix-helix N-terminal domain of bifunctional PutA protein 11
RuvA domain 2-like BRCT domain 11
P-loop containing nucleoside triphosphate hydrolases TrpR-like 11
Glutamine synthetase/guanido kinase GatB/YqeY motif 11
Zinc beta-ribbon DNA primase core 11
Insert subdomain of RNA polymerase alpha subunit C-terminal domain of RNA polymerase alpha subunit 11
P-loop containing nucleoside triphosphate hydrolases RecA protein, C-terminal domain 11
Duplicated hybrid motif Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain 11
Cupredoxins OmpA-like 11
Fe-S cluster assembly (FSCA) domain-like P-loop containing nucleoside triphosphate hydrolases 11
Methylglyoxal synthase-like Cytidine deaminase-like 11
Actin-like ATPase domain Homeodomain-like 11
PUA domain-like alpha/beta knot 11
FMN-binding split barrel 2Fe-2S ferredoxin-like 11
Metalloproteases ("zincins"), catalytic domain PDZ domain-like 11
Peptidase/esterase 'gauge' domain Nitrous oxide reductase, N-terminal domain 11
Metallo-dependent phosphatases 5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain 11
Immunoglobulin Immunoglobulin 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Alpha subunit of glutamate synthase, C-terminal domain 11
Riboflavin synthase domain-like Riboflavin synthase domain-like 11
Ribosomal protein L6 Ribosomal protein L6 11
Glucocorticoid receptor-like (DNA-binding domain) P-loop containing nucleoside triphosphate hydrolases 11
Coiled-coil domain of nucleotide exchange factor GrpE Head domain of nucleotide exchange factor GrpE 11
Nucleic acid-binding proteins Putative DNA-binding domain 11
Class I glutamine amidotransferase-like LD-carboxypeptidase A C-terminal domain-like 11
CoA-dependent acyltransferases MbtH-like 11
Phoshotransferase/anion transport protein Phosphoenolpyruvate/pyruvate domain 11
N-terminal domain of MutM-like DNA repair proteins S13-like H2TH domain 11
Nucleotide-diphospho-sugar transferases UDP-Glycosyltransferase/glycogen phosphorylase 11
Diaminopimelate epimerase-like Diaminopimelate epimerase-like 11
Thiol:disulfide interchange protein DsbD, N-terminal domain (DsbD-alpha) Thioredoxin-like 11
Pseudouridine synthase PUA domain-like 11
Nucleotidylyl transferase An anticodon-binding domain of class I aminoacyl-tRNA synthetases 11
Elongation factor Ts (EF-Ts), dimerisation domain Elongation factor Ts (EF-Ts), dimerisation domain 11
Chaperone J-domain Cysteine proteinases 11
Duplicated hybrid motif Phosphohistidine domain 11
DNA-glycosylase Nudix 11
Phage tail proteins alpha/beta-Hydrolases 11
YbaK/ProRS associated domain Class II aaRS ABD-related 11
Tropomyosin P-loop containing nucleoside triphosphate hydrolases 11
PUA domain-like P-loop containing nucleoside triphosphate hydrolases 11
Methionine synthase domain Methionine synthase activation domain-like 11
Trigger factor ribosome-binding domain Triger factor/SurA peptide-binding domain-like 11
Hsp33 domain HSP33 redox switch-like 11
Acyl-CoA N-acyltransferases (Nat) Thioesterase/thiol ester dehydrase-isomerase 11
Ribosomal protein S5 domain 2-like DNA mismatch repair protein MutL 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases tRNA-binding arm 11
PurS-like FGAM synthase PurL, linker domain 11
P-loop containing nucleoside triphosphate hydrolases Signal peptide-binding domain 11
MFS general substrate transporter MFS general substrate transporter 11
PurS-like PurM N-terminal domain-like 11
Ribonuclease H-like RuvA domain 2-like 11
FKBP-like FKBP-like 11
P-loop containing nucleoside triphosphate hydrolases Pre-protein crosslinking domain of SecA 11
Ribosomal protein L7/12, oligomerisation (N-terminal) domain ClpS-like 11
Glutathione synthetase ATP-binding domain-like Glutathione synthetase ATP-binding domain-like 11
Nucleotidyltransferase substrate binding subunit/domain Nucleotidyltransferase substrate binding subunit/domain 11
NAD(P)-binding Rossmann-fold domains Glutamyl tRNA-reductase dimerization domain 11
Heme-dependent catalase-like Class I glutamine amidotransferase-like 11
Nucleotide-binding domain Nucleotide-binding domain 11
Rudiment single hybrid motif PH0987 N-terminal domain-like 11
Formate dehydrogenase/DMSO reductase, domains 1-3 Flavoproteins 11
Carbon-nitrogen hydrolase Adenine nucleotide alpha hydrolases-like 11
CBS-domain pair Nucleotide cyclase 11
2Fe-2S ferredoxin-like CO dehydrogenase flavoprotein C-terminal domain-like 11
YajQ-like YajQ-like 11
EAL domain-like CBS-domain pair 11
FAD-binding/transporter-associated domain-like Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain 11
FAD-linked reductases, C-terminal domain Aminomethyltransferase beta-barrel domain 11
UBA-like Elongation factor Ts (EF-Ts), dimerisation domain 11
MOSC N-terminal domain-like PK beta-barrel domain-like 11
(Trans)glycosidases Class I glutamine amidotransferase-like 11
Dihydropteroate synthetase-like Methionine synthase domain 11
Adenine nucleotide alpha hydrolases-like GAF domain-like 11
DNA repair protein MutS, domain II DNA repair protein MutS, domain III 11
Carbohydrate-binding domain (Trans)glycosidases 11
(Trans)glycosidases Immunoglobulin 11
CheY-like EAL domain-like 11
Carbamate kinase-like ACT-like 11
Tex N-terminal region-like Nucleic acid-binding proteins 11
Periplasmic binding protein-like II ACT-like 11
Nucleotidylyl transferase Nucleic acid-binding proteins 11
Acyl-CoA N-acyltransferases (Nat) S-adenosyl-L-methionine-dependent methyltransferases 11
PLP-dependent transferases (Phosphotyrosine protein) phosphatases II 11
Probable ACP-binding domain of malonyl-CoA ACP transacylase CoA-dependent acyltransferases 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases Nucleic acid-binding proteins 11
Ribonuclease H-like Nucleic acid-binding proteins 11
Class II aaRS and biotin synthetases Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) 11
DnaK suppressor protein DksA, alpha-hairpin domain Glucocorticoid receptor-like (DNA-binding domain) 11
Obg GTP-binding protein N-terminal domain P-loop containing nucleoside triphosphate hydrolases 11
RuvA domain 2-like DNA helicase RuvA subunit, C-terminal domain 11
beta-N-acetylhexosaminidase-like domain E set domains 11
PurS-like Class I glutamine amidotransferase-like 11
2Fe-2S ferredoxin-like FAD-binding/transporter-associated domain-like 11
Hedgehog/intein (Hint) domain Homing endonucleases 11
YhbC-like, N-terminal domain YhbC-like, C-terminal domain 11
GroES-like GroES-like 11
Carbamoyl phosphate synthetase, small subunit N-terminal domain Class I glutamine amidotransferase-like 11
Aconitase B, N-terminal domain LeuD/IlvD-like 11
Cytochrome c oxidase subunit II-like, transmembrane region Cytochrome c 11
alpha/beta-Hydrolases Tautomerase/MIF 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) PRTase-like 11
Ribbon-helix-helix ALDH-like 11
Nucleotidylyl transferase Alpha-L RNA-binding motif 11
RNase III domain-like dsRNA-binding domain-like 11
DNA topoisomerase I domain DNA breaking-rejoining enzymes 11
Prokaryotic type KH domain (KH-domain type II) Rad51 N-terminal domain-like 11
TPR-like Carbohydrate-binding domain 11
WD40 repeat-like Calcium-dependent phosphotriesterase 11
SMAD/FHA domain P-loop containing nucleoside triphosphate hydrolases 11
Alkaline phosphatase-like Concanavalin A-like lectins/glucanases 11
Nucleic acid-binding proteins DNA helicase RuvA subunit, C-terminal domain 11
Bacterial muramidases Lysozyme-like 11
DnaJ/Hsp40 cysteine-rich domain HSP40/DnaJ peptide-binding domain 11
HprK N-terminal domain-like PEP carboxykinase-like 11
Macro domain-like Zn-dependent exopeptidases 11
R1 subunit of ribonucleotide reductase, N-terminal domain PFL-like glycyl radical enzymes 11
PHP14-like Phospholipase D/nuclease 11
Nucleotidyltransferase substrate binding subunit/domain HD-domain/PDEase-like 11
Sigma3 and sigma4 domains of RNA polymerase sigma factors NTF2-like 11
Succinyl-CoA synthetase domains Acyl-CoA N-acyltransferases (Nat) 11
PEP carboxykinase N-terminal domain PEP carboxykinase-like 11
PrpR receptor domain-like P-loop containing nucleoside triphosphate hydrolases 11
Rho N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 11
Ribonuclease PH domain 2-like Nucleic acid-binding proteins 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) FMN-linked oxidoreductases 11
Chaperone J-domain HSC20 (HSCB), C-terminal oligomerisation domain 11
PheT/TilS domain Anticodon-binding domain of PheRS 11
Transcription factor NusA, N-terminal domain Nucleic acid-binding proteins 11
"Winged helix" DNA-binding domain ACP-like 11
N-terminal domain of DnaB helicase Hedgehog/intein (Hint) domain 11
ABC transporter involved in vitamin B12 uptake, BtuC ABC transporter involved in vitamin B12 uptake, BtuC 11
Phosphoenolpyruvate/pyruvate domain Nucleotide-diphospho-sugar transferases 11
DNA/RNA polymerases Lesion bypass DNA polymerase (Y-family), little finger domain 11
Glutathione synthetase ATP-binding domain-like Carbamoyl phosphate synthetase, large subunit connection domain 11
Duplicated hybrid motif HPr-like 11
PIN domain-like P-loop containing nucleoside triphosphate hydrolases 11
FAD/NAD(P)-binding domain 4Fe-4S ferredoxins 11
4Fe-4S ferredoxins ADC-like 11
Ribosomal protein S5 domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
Protein kinase-like (PK-like) Homodimeric domain of signal transducing histidine kinase 11
Glutathione synthetase ATP-binding domain-like L-aspartase-like 11
PDZ domain-like ClpP/crotonase 11
Glutathione synthetase ATP-binding domain-like PH0987 N-terminal domain-like 11
Nucleotidylyl transferase Ribosomal protein L25-like 11
Galactose mutarotase-like Glycosyl hydrolase domain 11
Cytochrome c oxidase subunit II-like, transmembrane region OmpA-like 11
FMN-binding split barrel Riboflavin synthase domain-like 11
Chitinase insertion domain Carbohydrate binding domain 11
Translation initiation factor IF3, N-terminal domain Translation initiation factor IF3, C-terminal domain 11
PreATP-grasp domain PH0987 N-terminal domain-like 11
Aldolase 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 11
HemD-like HemD-like 11
Class II aaRS and biotin synthetases C-terminal domain of transcriptional repressors 11
PreATP-grasp domain Carbamoyl phosphate synthetase, large subunit connection domain 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) SIS domain 11
PUA domain-like Ribosomal protein S5 domain 2-like 11
Tetrapyrrole methylase S-adenosyl-L-methionine-dependent methyltransferases 11
WD40 repeat-like WD40 repeat-like 11
PurM N-terminal domain-like PurM N-terminal domain-like 11
PrpR receptor domain-like PYP-like sensor domain (PAS domain) 11
Class II aaRS and biotin synthetases YbaK/ProRS associated domain 11
Flavoproteins Riboflavin synthase domain-like 11
Carbamate kinase-like Acyl-CoA N-acyltransferases (Nat) 11
Glucose permease domain IIB Glucose permease domain IIB 11
Putative DNA-binding domain Initiation factor IF2/eIF5b, domain 3 11
Carbamoyl phosphate synthetase, large subunit connection domain Methylglyoxal synthase-like 11
Chorismate mutase II ACT-like 11
FAD/NAD(P)-binding domain Nitrite and sulphite reductase 4Fe-4S domain-like 11
Acetyl-CoA synthetase-like MbtH-like 11
PK beta-barrel domain-like Phosphoenolpyruvate/pyruvate domain 11
PUA domain-like S-adenosyl-L-methionine-dependent methyltransferases 11
N-terminal domain of DnaB helicase Homing endonucleases 11
Class II aaRS and biotin synthetases Anticodon-binding domain of PheRS 11
2Fe-2S ferredoxin-like 2Fe-2S ferredoxin-like 11
cAMP-binding domain-like NAD(P)-binding Rossmann-fold domains 11
Glutamyl tRNA-reductase catalytic, N-terminal domain Glutamyl tRNA-reductase dimerization domain 11
NagB/RpiA/CoA transferase-like D-ribose-5-phosphate isomerase (RpiA), lid domain 11
Globin-like Ferredoxin reductase-like, C-terminal NADP-linked domain 11
Aconitase B, N-terminal domain Aconitase iron-sulfur domain 11
HAMP domain-like Histidine-containing phosphotransfer domain, HPT domain 11
"Winged helix" DNA-binding domain Thiolase-like 11
Cupredoxins Cupredoxins 11
PurM C-terminal domain-like Class I glutamine amidotransferase-like 11
Protein kinase-like (PK-like) GAF domain-like 11
GroES-like Thioesterase/thiol ester dehydrase-isomerase 11
N-acetylmuramoyl-L-alanine amidase-like PGBD-like 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain III 11
Homodimeric domain of signal transducing histidine kinase CheW-like 11
ClpP/crotonase ClpP/crotonase 11
Nucleotide-diphospho-sugar transferases Nucleotide-diphospho-sugar transferases 11
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Pyrimidine nucleoside phosphorylase C-terminal domain 11
FAD/NAD-linked reductases, dimerisation (C-terminal) domain FabD/lysophospholipase-like 11
Periplasmic binding protein-like I Homeodomain-like 11
P-loop containing nucleoside triphosphate hydrolases ACT-like 11
Ada DNA repair protein, N-terminal domain (N-Ada 10) Methylated DNA-protein cysteine methyltransferase, C-terminal domain 11
PRC-barrel domain PRC-barrel domain 11
FAD/NAD(P)-binding domain FabD/lysophospholipase-like 11
Ribosomal protein S5 domain 2-like Nucleic acid-binding proteins 11
MOP-like MOP-like 11
DinB/YfiT-like putative metalloenzymes C-type lectin-like 11
Homo-oligomeric flavin-containing Cys decarboxylases, HFCD CoaB-like 11
Nucleic acid-binding proteins ArfGap/RecO-like zinc finger 11
Ribonuclease PH domain 2-like Ribonuclease PH domain 2-like 11
CBS-domain pair Inosine monophosphate dehydrogenase (IMPDH) 11
NagB/RpiA/CoA transferase-like 4Fe-4S ferredoxins 11
Putative DNA-binding domain Class II aaRS and biotin synthetases 11
Carbohydrate-binding domain beta-N-acetylhexosaminidase-like domain 11
FAD-linked reductases, C-terminal domain 4Fe-4S ferredoxins 11
Single hybrid motif FAD/NAD-linked reductases, dimerisation (C-terminal) domain 11
Cyclophilin-like Single hybrid motif 11
gp5 N-terminal domain-like alpha/beta-Hydrolases 11
Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain Pyrimidine nucleoside phosphorylase C-terminal domain 11
CarD-like TRCF domain-like 11
"Winged helix" DNA-binding domain Actin-like ATPase domain 11
ADC-like Flavoproteins 11
(Trans)glycosidases (Trans)glycosidases 11
Phoshotransferase/anion transport protein HPr-like 11
Single hybrid motif FAD/NAD(P)-binding domain 11
S-adenosyl-L-methionine-dependent methyltransferases UDP-Glycosyltransferase/glycogen phosphorylase 11
Adenine nucleotide alpha hydrolases-like PheT/TilS domain 11
Nucleotidylyl transferase tRNA-binding arm 11
SIS domain HAD-like 11
RuvA domain 2-like JAB1/MPN domain 11
Epsilon subunit of F1F0-ATP synthase N-terminal domain Epsilon subunit of F1F0-ATP synthase C-terminal domain 11
Homeodomain-like Methylated DNA-protein cysteine methyltransferase domain 11
Single hybrid motif Single hybrid motif 11
DPP6 N-terminal domain-like alpha/beta-Hydrolases 11
FMN-binding split barrel Ferredoxin reductase-like, C-terminal NADP-linked domain 11
FMN-linked oxidoreductases 4Fe-4S ferredoxins 11
Ribosomal L11/L12e N-terminal domain Ribosomal protein L11, C-terminal domain 11

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