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Domain combination pairs in Paenibacillus terrae HPL-003

All pairs of domain combinations at the superfamily level are listed here.
The identification of domain pairs does not account for the possibility of non-contiguous domains. Inserted, or interlaced, domains are seen as having a simple pair ordering.

  • For a list of unique full length architectures for this genome click here (can be slow).
Adjacent domain pairs graph

Graph of adjacent domain pairs.


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Domain combination pairs

762 domain combination pairs.
Click on a column heading to sort that column, or the 'View' button to see domain architetures for that domain pair combination.

Superfamily (N) Superfamily (C) Number of occurrances Number unique
Homeodomain-like Homeodomain-like 4610
"Winged helix" DNA-binding domain Periplasmic binding protein-like II 341
Homodimeric domain of signal transducing histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 3313
P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases 3214
CheY-like C-terminal effector domain of the bipartite response regulators 282
HAMP domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 285
Homeodomain-like Tetracyclin repressor-like, C-terminal domain 282
lambda repressor-like DNA-binding domains Periplasmic binding protein-like I 261
Regulatory protein AraC Homeodomain-like 244
NAD(P)-binding Rossmann-fold domains Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 244
ABC transporter transmembrane region P-loop containing nucleoside triphosphate hydrolases 232
CheY-like Homeodomain-like 213
(Trans)glycosidases Glycosyl hydrolase domain 2011
Zn-dependent exopeptidases Bacterial exopeptidase dimerisation domain 181
Actin-like ATPase domain Actin-like ATPase domain 175
NAD(P)-binding Rossmann-fold domains 6-phosphogluconate dehydrogenase C-terminal domain-like 174
Sigma2 domain of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 164
PTS-regulatory domain, PRD PTS-regulatory domain, PRD 164
Glucose permease domain IIB Duplicated hybrid motif 152
Concanavalin A-like lectins/glucanases Arabinanase/levansucrase/invertase 135
Aminoacid dehydrogenase-like, N-terminal domain NAD(P)-binding Rossmann-fold domains 133
HAMP domain-like Homodimeric domain of signal transducing histidine kinase 123
Acetyl-CoA synthetase-like ACP-like 1211
Multidrug resistance efflux transporter EmrE Multidrug resistance efflux transporter EmrE 122
ACP-like CoA-dependent acyltransferases 1110
SacY-like RNA-binding domain PTS-regulatory domain, PRD 111
Galactose-binding domain-like (Trans)glycosidases 119
Acetyl-CoA synthetase-like CoA-dependent acyltransferases 1110
GroES-like NAD(P)-binding Rossmann-fold domains 111
Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) 106
Metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases 103
PYP-like sensor domain (PAS domain) ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 108
CoA-dependent acyltransferases CoA-dependent acyltransferases 109
P-loop containing nucleoside triphosphate hydrolases MOP-like 81
Acetyl-CoA synthetase-like Acetyl-CoA synthetase-like 87
ACP-like ACP-like 87
P-loop containing nucleoside triphosphate hydrolases Translation proteins 76
PTS-regulatory domain, PRD Phoshotransferase/anion transport protein 75
MalF N-terminal region-like MetI-like 71
Thiamin diphosphate-binding fold (THDP-binding) TK C-terminal domain-like 74
"Winged helix" DNA-binding domain NagB/RpiA/CoA transferase-like 71
NAD(P)-binding Rossmann-fold domains LDH C-terminal domain-like 72
Glutathione synthetase ATP-binding domain-like PreATP-grasp domain 74
Nucleotidylyl transferase Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 76
"Winged helix" DNA-binding domain GntR ligand-binding domain-like 61
Calcium ATPase, transduction domain A HAD-like 65
beta-Galactosidase/glucuronidase domain (Trans)glycosidases 64
PTS system IIB component-like Phoshotransferase/anion transport protein 65
Calcium ATPase, transduction domain A Calcium ATPase, transmembrane domain M 65
HAD-like Calcium ATPase, transmembrane domain M 65
Galactose-binding domain-like beta-Galactosidase/glucuronidase domain 64
Homodimeric domain of signal transducing histidine kinase CheY-like 65
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheY-like 65
Formate dehydrogenase/DMSO reductase, domains 1-3 ADC-like 63
HlyD-like secretion proteins HlyD-like secretion proteins 63
PYP-like sensor domain (PAS domain) Homodimeric domain of signal transducing histidine kinase 65
Formate/glycerate dehydrogenase catalytic domain-like NAD(P)-binding Rossmann-fold domains 62
cAMP-binding domain-like "Winged helix" DNA-binding domain 61
P-loop containing nucleoside triphosphate hydrolases Ribosomal protein S5 domain 2-like 66
(Trans)glycosidases Beta-D-glucan exohydrolase, C-terminal domain 63
"Winged helix" DNA-binding domain Chorismate lyase-like 51
FAD/NAD(P)-binding domain FAD-linked reductases, C-terminal domain 51
PTS-regulatory domain, PRD PTS system IIB component-like 54
Phospholipase D/nuclease Phospholipase D/nuclease 52
Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 51
"Winged helix" DNA-binding domain Dimeric alpha+beta barrel 51
MurD-like peptide ligases, catalytic domain MurD-like peptide ligases, peptide-binding domain 53
PLP-binding barrel Alanine racemase C-terminal domain-like 52
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Ribosomal protein S5 domain 2-like 54
"Winged helix" DNA-binding domain PLP-dependent transferases 51
Translation proteins EF-G C-terminal domain-like 54
Penicillin binding protein dimerisation domain beta-lactamase/transpeptidase-like 53
Cation efflux protein transmembrane domain-like Cation efflux protein cytoplasmic domain-like 51
Sensory domain-like Methyl-accepting chemotaxis protein (MCP) signaling domain 52
P-loop containing nucleoside triphosphate hydrolases EF-G C-terminal domain-like 54
Alpha-L RNA-binding motif Pseudouridine synthase 51
FAD/NAD(P)-binding domain FAD/NAD(P)-binding domain 53
EF-G C-terminal domain-like EF-G C-terminal domain-like 43
FAD/NAD(P)-binding domain FAD/NAD-linked reductases, dimerisation (C-terminal) domain 41
Nucleotide-diphospho-sugar transferases Trimeric LpxA-like enzymes 41
Metallo-dependent phosphatases 5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain 43
Lysozyme-like beta-lactamase/transpeptidase-like 44
"Winged helix" DNA-binding domain Actin-like ATPase domain 42
Thiamin diphosphate-binding fold (THDP-binding) DHS-like NAD/FAD-binding domain 41
Ribosomal protein S5 domain 2-like GHMP Kinase, C-terminal domain 41
Phosphohistidine domain Phosphoenolpyruvate/pyruvate domain 42
"Winged helix" DNA-binding domain GAF domain-like 41
Aspartate/glutamate racemase Aspartate/glutamate racemase 41
CBS-domain pair FAD-binding/transporter-associated domain-like 41
Fibronectin type III Fibronectin type III 44
Copper amine oxidase, domain N Copper amine oxidase, domain N 44
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB transmembrane domain 42
Glutathione synthetase ATP-binding domain-like Rudiment single hybrid motif 41
Arabinanase/levansucrase/invertase Galactose-binding domain-like 42
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 42
PreATP-grasp domain Rudiment single hybrid motif 41
Nucleic acid-binding proteins Class II aaRS and biotin synthetases 43
PDZ domain-like Trypsin-like serine proteases 43
Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain 42
P-loop containing nucleoside triphosphate hydrolases post-AAA+ oligomerization domain-like 42
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 42
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 42
Copper amine oxidase, domain N (Trans)glycosidases 43
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB transmembrane domain 42
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex CoA-dependent acyltransferases 32
Single hybrid motif CoA-dependent acyltransferases 32
NAD(P)-binding Rossmann-fold domains ACT-like 33
Nucleotide-diphospho-sugar transferases RmlC-like cupins 31
Thiolase-like Thiolase-like 31
Homeodomain-like SIS domain 31
Nucleic acid-binding proteins P-loop containing nucleoside triphosphate hydrolases 33
P-loop containing nucleoside triphosphate hydrolases "Winged helix" DNA-binding domain 33
6-phosphogluconate dehydrogenase C-terminal domain-like UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 31
P-loop containing nucleoside triphosphate hydrolases Class I glutamine amidotransferase-like 32
P-loop containing nucleoside triphosphate hydrolases ACT-like 31
(Trans)glycosidases Class I glutamine amidotransferase-like 31
Invasin/intimin cell-adhesion fragments Invasin/intimin cell-adhesion fragments 33
LuxS/MPP-like metallohydrolase LuxS/MPP-like metallohydrolase 31
FMN-linked oxidoreductases FAD/NAD(P)-binding domain 33
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphoenolpyruvate/pyruvate domain 31
Methylated DNA-protein cysteine methyltransferase domain Methylated DNA-protein cysteine methyltransferase, C-terminal domain 32
tRNA-binding arm Class II aaRS and biotin synthetases 31
Concanavalin A-like lectins/glucanases Concanavalin A-like lectins/glucanases 33
FabD/lysophospholipase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 31
Nitrite/Sulfite reductase N-terminal domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 32
ValRS/IleRS/LeuRS editing domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 33
RmlC-like cupins Homeodomain-like 31
PK beta-barrel domain-like Phosphoenolpyruvate/pyruvate domain 32
Class II aaRS and biotin synthetases Class II aaRS ABD-related 33
FAD/NAD(P)-binding domain Nitrite and sulphite reductase 4Fe-4S domain-like 32
HAMP domain-like PYP-like sensor domain (PAS domain) 32
Galactose-binding domain-like Fibronectin type III 33
ACT-like ACT-like 32
"Winged helix" DNA-binding domain CBS-domain pair 32
MetI-like Periplasmic binding protein-like II 32
beta-N-acetylhexosaminidase-like domain (Trans)glycosidases 33
Homeodomain-like "Helical backbone" metal receptor 32
Glycosyl hydrolase domain Galactose-binding domain-like 33
RuvA domain 2-like Nucleic acid-binding proteins 33
Nucleic acid-binding proteins Nucleic acid-binding proteins 33
DNA repair protein MutS, domain III P-loop containing nucleoside triphosphate hydrolases 33
Aldolase 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 31
Galactose-binding domain-like SGNH hydrolase 31
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 32
Fibronectin type III Carbohydrate-binding domain 33
Sensory domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 32
NAD(P)-binding Rossmann-fold domains UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 31
ValRS/IleRS/LeuRS editing domain Nucleotidylyl transferase 33
Ribosomal protein S5 domain 2-like EF-G C-terminal domain-like 33
Glycoside hydrolase/deacetylase Galactose mutarotase-like 33
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphohistidine domain 31
CheY-like CheY-like 33
FKBP-like Triger factor/SurA peptide-binding domain-like 33
Families 57/38 glycoside transferase middle domain Galactose mutarotase-like 33
lambda repressor-like DNA-binding domains RmlC-like cupins 31
Single hybrid motif Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 32
Outer membrane efflux proteins (OEP) HlyD-like secretion proteins 33
Glycoside hydrolase/deacetylase Families 57/38 glycoside transferase middle domain 33
Sensory domain-like PYP-like sensor domain (PAS domain) 32
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 32
Creatinase/prolidase N-terminal domain Creatinase/aminopeptidase 31
Translation proteins Ribosomal protein S5 domain 2-like 22
Class I glutamine amidotransferase-like LD-carboxypeptidase A C-terminal domain-like 21
"Winged helix" DNA-binding domain C-terminal domain of arginine repressor 21
Aminopeptidase/glucanase lid domain Zn-dependent exopeptidases 21
beta-Galactosidase/glucuronidase domain beta-Galactosidase/glucuronidase domain 22
(Trans)glycosidases Galactose mutarotase-like 22
PurM N-terminal domain-like PurM C-terminal domain-like 22
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 21
Copper amine oxidase, domain N Zn-dependent exopeptidases 21
MurE/MurF N-terminal domain MurD-like peptide ligases, peptide-binding domain 21
Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like 22
Phosphoenolpyruvate/pyruvate domain PK C-terminal domain-like 21
PYP-like sensor domain (PAS domain) PYP-like sensor domain (PAS domain) 22
Glutamine synthetase, N-terminal domain Glutamine synthetase/guanido kinase 21
CheY-like TPR-like 21
Sporulation response regulatory protein Spo0B ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 21
Serine metabolism enzymes domain ACT-like 22
N-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase 21
"Winged helix" DNA-binding domain PTS system IIB component-like 22
Phosphoglucomutase, first 3 domains Phosphoglucomutase, first 3 domains 22
Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 21
Subtilisin-like PA domain 22
NagB/RpiA/CoA transferase-like NagB/RpiA/CoA transferase-like 22
HMA, heavy metal-associated domain HAD-like 22
Ribosomal protein S5 domain 2-like Ribonuclease PH domain 2-like 22
HMA, heavy metal-associated domain Calcium ATPase, transmembrane domain M 22
C-terminal effector domain of the bipartite response regulators TPR-like 21
GAF domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 22
PIN domain-like 5' to 3' exonuclease, C-terminal subdomain 22
PLP-dependent transferases Ornithine decarboxylase C-terminal domain 21
HMA, heavy metal-associated domain Calcium ATPase, transduction domain A 22
Ribosomal protein S5 domain 2-like Type II DNA topoisomerase 21
NAD(P)-binding Rossmann-fold domains TrkA C-terminal domain-like 21
PPK N-terminal domain-like PHP14-like 21
Metal cation-transporting ATPase, ATP-binding domain N HAD-like 22
Concanavalin A-like lectins/glucanases Galactose-binding domain-like 22
P-loop containing nucleoside triphosphate hydrolases FtsH protease domain-like 22
(Trans)glycosidases Fibronectin type III 22
GreA transcript cleavage protein, N-terminal domain FKBP-like 21
Enolase N-terminal domain-like Enolase C-terminal domain-like 21
Concanavalin A-like lectins/glucanases Fibronectin type III 22
Translation proteins ThrRS/AlaRS common domain 22
PK beta-barrel domain-like PK C-terminal domain-like 21
Acetyl-CoA synthetase-like NAD(P)-binding Rossmann-fold domains 22
Nucleotide-diphospho-sugar transferases TPR-like 21
FMN-binding split barrel UbiD C-terminal domain-like 22
L30e-like alpha/beta knot 21
Bacterial adhesins Bacterial adhesins 22
Translation proteins SH3-like domain Nucleic acid-binding proteins 22
"Winged helix" DNA-binding domain Phoshotransferase/anion transport protein 22
Histidine-containing phosphotransfer domain, HPT domain Homodimeric domain of signal transducing histidine kinase 22
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Nucleotidylyl transferase 21
"Winged helix" DNA-binding domain Thioesterase/thiol ester dehydrase-isomerase 22
Galactose mutarotase-like Six-hairpin glycosidases 21
Calcium ATPase, transduction domain A Metal cation-transporting ATPase, ATP-binding domain N 22
MurCD N-terminal domain MurD-like peptide ligases, peptide-binding domain 21
(Trans)glycosidases Carbohydrate-binding domain 22
Phosphoglucomutase, first 3 domains Phosphoglucomutase, C-terminal domain 22
MurE/MurF N-terminal domain MurD-like peptide ligases, catalytic domain 21
Metal cation-transporting ATPase, ATP-binding domain N Calcium ATPase, transmembrane domain M 22
E set domains E set domains 22
Homeodomain-like Probable bacterial effector-binding domain 21
Galactose-binding domain-like CheY-like 21
(Trans)glycosidases (Trans)glycosidases 22
Carbamate kinase-like ACT-like 21
Fe,Mn superoxide dismutase (SOD), N-terminal domain Fe,Mn superoxide dismutase (SOD), C-terminal domain 22
CorA soluble domain-like Magnesium transport protein CorA, transmembrane region 21
MetI-like MetI-like 21
ACP-like NAD(P)-binding Rossmann-fold domains 22
Class II aaRS and biotin synthetases ThrRS/AlaRS common domain 22
MFS general substrate transporter MFS general substrate transporter 21
Nicotinate/Quinolinate PRTase N-terminal domain-like Nicotinate/Quinolinate PRTase C-terminal domain-like 21
beta-lactamase/transpeptidase-like Penicillin-binding protein 2x (pbp-2x), c-terminal domain 22
DPP6 N-terminal domain-like alpha/beta-Hydrolases 21
Glucocorticoid receptor-like (DNA-binding domain) P-loop containing nucleoside triphosphate hydrolases 22
"Winged helix" DNA-binding domain Periplasmic binding protein-like I 21
Histidine-containing phosphotransfer domain, HPT domain ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 22
Type II DNA topoisomerase GyrA/ParC C-terminal domain-like 22
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 21
Sensory domain-like Sporulation response regulatory protein Spo0B 21
N-terminal domain of alpha and beta subunits of F1 ATP synthase P-loop containing nucleoside triphosphate hydrolases 21
PPK N-terminal domain-like Phospholipase D/nuclease 21
R1 subunit of ribonucleotide reductase, N-terminal domain PFL-like glycyl radical enzymes 21
FAD/NAD(P)-binding domain Nitrite/Sulfite reductase N-terminal domain-like 21
beta-lactamase/transpeptidase-like Fibronectin type III 22
alpha/beta-Hydrolases Galactose-binding domain-like 22
PYP-like sensor domain (PAS domain) Sporulation response regulatory protein Spo0B 21
beta-lactamase/transpeptidase-like Penicillin-binding protein associated domain 21
Penicillin binding protein dimerisation domain Penicillin-binding protein 2x (pbp-2x), c-terminal domain 22
Galactose-binding domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 21
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Adenine nucleotide alpha hydrolases-like 21
"Winged helix" DNA-binding domain "Winged helix" DNA-binding domain 22
"Winged helix" DNA-binding domain PTS-regulatory domain, PRD 22
DNA ligase/mRNA capping enzyme, catalytic domain Nucleic acid-binding proteins 22
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 21
Glutathione synthetase ATP-binding domain-like Phosphohistidine domain 22
Galactose-binding domain-like Homodimeric domain of signal transducing histidine kinase 21
P-loop containing nucleoside triphosphate hydrolases C-terminal domain of alpha and beta subunits of F1 ATP synthase 21
Translation initiation factor IF3, N-terminal domain Translation initiation factor IF3, C-terminal domain 22
Putative DNA-binding domain S-adenosyl-L-methionine-dependent methyltransferases 21
Ada DNA repair protein, N-terminal domain (N-Ada 10) Homeodomain-like 21
Riboflavin synthase domain-like Ferredoxin reductase-like, C-terminal NADP-linked domain 22
TPR-like TPR-like 22
DNA/RNA polymerases Lesion bypass DNA polymerase (Y-family), little finger domain 21
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Type II DNA topoisomerase 21
P-loop containing nucleoside triphosphate hydrolases Hypothetical protein YjiA, C-terminal domain 21
Nudix "Winged helix" DNA-binding domain 21
PHP14-like Phospholipase D/nuclease 21
MurCD N-terminal domain MurD-like peptide ligases, catalytic domain 21
Lysozyme-like Fibronectin type III 22
(Trans)glycosidases E set domains 22
N-terminal domain of MutM-like DNA repair proteins S13-like H2TH domain 22
CheC-like Surface presentation of antigens (SPOA) 22
Galactose-binding domain-like Galactose-binding domain-like 11
Acyl-CoA dehydrogenase NM domain-like Acyl-CoA dehydrogenase C-terminal domain-like 11
Glutathione synthetase ATP-binding domain-like Succinyl-CoA synthetase domains 11
GIY-YIG endonuclease RuvA domain 2-like 11
PDZ domain-like PGBD-like 11
Nucleotidyltransferase Carbohydrate phosphatase 11
C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase Invasin/intimin cell-adhesion fragments 11
GroEL equatorial domain-like GroEL-intermediate domain like 11
4Fe-4S ferredoxins ADC-like 11
Eukaryotic type KH-domain (KH-domain type I) Nucleic acid-binding proteins 11
Ribosomal L11/L12e N-terminal domain Ribosomal protein L11, C-terminal domain 11
Translation proteins Initiation factor IF2/eIF5b, domain 3 11
CBS-domain pair Thioesterase/thiol ester dehydrase-isomerase 11
Glycosyl hydrolase domain Fibronectin type III 11
CheY-like Histidine-containing phosphotransfer domain, HPT domain 11
Beta-D-glucan exohydrolase, C-terminal domain Galactose-binding domain-like 11
Histidine-containing phosphotransfer domain, HPT domain CheW-like 11
Subtilisin-like E set domains 11
NAD(P)-binding Rossmann-fold domains Siroheme synthase middle domains-like 11
PIN domain-like P-loop containing nucleoside triphosphate hydrolases 11
PYP-like sensor domain (PAS domain) Methyl-accepting chemotaxis protein (MCP) signaling domain 11
ValRS/IleRS/LeuRS editing domain tRNA-binding arm 11
Copper amine oxidase, domain N Outer membrane efflux proteins (OEP) 11
Hsp33 domain HSP33 redox switch-like 11
LysM domain Duplicated hybrid motif 11
alpha/beta-Hydrolases SGNH hydrolase 11
DNA repair protein MutS, domain I P-loop containing nucleoside triphosphate hydrolases 11
Six-hairpin glycosidases Carbohydrate-binding domain 11
HprK N-terminal domain-like PEP carboxykinase-like 11
YjeF N-terminal domain-like Ribokinase-like 11
ParB/Sulfiredoxin S-adenosyl-L-methionine-dependent methyltransferases 11
RuvA domain 2-like RuvA domain 2-like 11
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 Eukaryotic type KH-domain (KH-domain type I) 11
CheY-like PP2C-like 11
Nucleotidylyl transferase An anticodon-binding domain of class I aminoacyl-tRNA synthetases 11
Double Clp-N motif P-loop containing nucleoside triphosphate hydrolases 11
Nucleotidylyl transferase Nucleic acid-binding proteins 11
2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain Alkaline phosphatase-like 11
RuvA domain 2-like DNA helicase RuvA subunit, C-terminal domain 11
(Trans)glycosidases Putative glucosidase YicI, C-terminal domain 11
Adenine nucleotide alpha hydrolases-like GMP synthetase C-terminal dimerisation domain 11
Invasin/intimin cell-adhesion fragments Copper amine oxidase, domain N 11
Galactose mutarotase-like Glycosyl hydrolase domain 11
Prokaryotic type I DNA topoisomerase Zinc beta-ribbon 11
Formate/glycerate dehydrogenase catalytic domain-like ACT-like 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Alpha subunit of glutamate synthase, C-terminal domain 11
Prokaryotic type KH domain (KH-domain type II) Ribosomal protein S3 C-terminal domain 11
4Fe-4S ferredoxins Formate dehydrogenase/DMSO reductase, domains 1-3 11
Subtilisin-like L domain-like 11
PUA domain-like Ribosomal protein S5 domain 2-like 11
Nucleic acid-binding proteins Prokaryotic type KH domain (KH-domain type II) 11
Glutamine synthetase/guanido kinase GatB/YqeY motif 11
dsRNA-binding domain-like Ribosomal protein S5 domain 2-like 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
Carbamoyl phosphate synthetase, large subunit connection domain Methylglyoxal synthase-like 11
Sensory domain-like HAMP domain-like 11
5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain LysM domain 11
Sigma2 domain of RNA polymerase sigma factors NTF2-like 11
"Winged helix" DNA-binding domain Iron-dependent repressor protein, dimerization domain 11
TGS-like Class II aaRS ABD-related 11
vWA-like vWA-like 11
HD-domain/PDEase-like Nucleotidyltransferase 11
HMA, heavy metal-associated domain HMA, heavy metal-associated domain 11
PA domain L domain-like 11
P-loop containing nucleoside triphosphate hydrolases RecA protein, C-terminal domain 11
Collagen-binding domain Carboxypeptidase regulatory domain-like 11
RuBisCO, large subunit, small (N-terminal) domain RuBisCo, C-terminal domain 11
Phage tail proteins Cysteine proteinases 11
"Winged helix" DNA-binding domain HRDC-like 11
FMN-linked oxidoreductases Nucleotide-binding domain 11
Class II aaRS and biotin synthetases Anticodon-binding domain of PheRS 11
Bacillus cereus metalloprotein-like Fe,Mn superoxide dismutase (SOD), C-terminal domain 11
Aldolase AFP III-like domain 11
RNase III domain-like dsRNA-binding domain-like 11
Metal cation-transporting ATPase, ATP-binding domain N Metal cation-transporting ATPase, ATP-binding domain N 11
alpha-helical ferredoxin Methylated DNA-protein cysteine methyltransferase, C-terminal domain 11
Class I glutamine amidotransferase-like E set domains 11
PDZ domain-like Ribosomal protein S5 domain 2-like 11
alpha-helical ferredoxin Nucleotide-binding domain 11
Nucleotidylyl transferase Ribosomal protein L25-like 11
"Winged helix" DNA-binding domain C-terminal domain of transcriptional repressors 11
FMN-linked oxidoreductases Alpha subunit of glutamate synthase, C-terminal domain 11
Prokaryotic type KH domain (KH-domain type II) Prokaryotic type KH domain (KH-domain type II) 11
PreATP-grasp domain Methylglyoxal synthase-like 11
Glycosyl hydrolase domain Starch-binding domain-like 11
gp5 N-terminal domain-like Cysteine proteinases 11
DNA-glycosylase Nudix 11
PurM C-terminal domain-like PurM C-terminal domain-like 11
all-alpha NTP pyrophosphatases all-alpha NTP pyrophosphatases 11
THUMP domain-like Adenine nucleotide alpha hydrolases-like 11
Rho N-terminal domain-like Nucleic acid-binding proteins 11
WD40 repeat-like Galactose-binding domain-like 11
MoeA N-terminal region -like MoeA C-terminal domain-like 11
PurM N-terminal domain-like PurM N-terminal domain-like 11
Oligoxyloglucan reducing end-specific cellobiohydrolase E set domains 11
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Pyrimidine nucleoside phosphorylase C-terminal domain 11
Periplasmic binding protein-like II ACT-like 11
CheY-like Methylesterase CheB, C-terminal domain 11
Barwin-like endoglucanases PHL pollen allergen 11
Ribosomal protein S5 domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
"Winged helix" DNA-binding domain Putative transcriptional regulator TM1602, C-terminal domain 11
Nucleic acid-binding proteins Putative DNA-binding domain 11
Heat shock protein 70kD (HSP70), peptide-binding domain Heat shock protein 70kD (HSP70), C-terminal subdomain 11
DeoB insert domain-like Alkaline phosphatase-like 11
Concanavalin A-like lectins/glucanases PKD domain 11
P-loop containing nucleoside triphosphate hydrolases Obg GTP-binding protein C-terminal domain 11
HSP40/DnaJ peptide-binding domain HSP40/DnaJ peptide-binding domain 11
P-loop containing nucleoside triphosphate hydrolases Signal peptide-binding domain 11
PYP-like sensor domain (PAS domain) Nucleotide cyclase 11
Glutathione synthetase ATP-binding domain-like Phosphoenolpyruvate/pyruvate domain 11
NTF2-like NTF2-like 11
L9 N-domain-like Ribosomal protein L9 C-domain 11
NagB/RpiA/CoA transferase-like alpha-helical ferredoxin 11
RuvA domain 2-like JAB1/MPN domain 11
Galactose-binding domain-like Carbohydrate-binding domain 11
GroEL equatorial domain-like GroEL apical domain-like 11
Insert subdomain of RNA polymerase alpha subunit RBP11-like subunits of RNA polymerase 11
HAMP domain-like HD-domain/PDEase-like 11
Formate/glycerate dehydrogenase catalytic domain-like Serine metabolism enzymes domain 11
Cobalamin (vitamin B12)-binding domain Methionine synthase activation domain-like 11
Carboxypeptidase regulatory domain-like Carboxypeptidase regulatory domain-like 11
P-loop containing nucleoside triphosphate hydrolases Pre-protein crosslinking domain of SecA 11
Tex N-terminal region-like Nucleic acid-binding proteins 11
ParB/Sulfiredoxin KorB DNA-binding domain-like 11
Acetyl-CoA synthetase-like alpha/beta-Hydrolases 11
Homo-oligomeric flavin-containing Cys decarboxylases, HFCD CoaB-like 11
FucI/AraA N-terminal and middle domains FucI/AraA C-terminal domain-like 11
ClpP/crotonase ClpP/crotonase 11
Zinc beta-ribbon DNA primase core 11
ACT-like Formyltransferase 11
CheY-binding domain of CheA Homodimeric domain of signal transducing histidine kinase 11
ACP-like alpha/beta-Hydrolases 11
Adenine nucleotide alpha hydrolases-like MesJ substrate recognition domain-like 11
TrmE connector domain P-loop containing nucleoside triphosphate hydrolases 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain ACT-like 11
Cobalamin (vitamin B12)-binding domain Radical SAM enzymes 11
Copper amine oxidase, domain N PKD domain 11
Oligoxyloglucan reducing end-specific cellobiohydrolase Oligoxyloglucan reducing end-specific cellobiohydrolase 11
DnaJ/Hsp40 cysteine-rich domain HSP40/DnaJ peptide-binding domain 11
Chemotaxis receptor methyltransferase CheR, N-terminal domain S-adenosyl-L-methionine-dependent methyltransferases 11
NagB/RpiA/CoA transferase-like D-ribose-5-phosphate isomerase (RpiA), lid domain 11
Glutathione synthetase ATP-binding domain-like Carbamoyl phosphate synthetase, large subunit connection domain 11
Nucleotidyltransferase TGS-like 11
Hypothetical protein SAV1430 ARM repeat 11
PrpR receptor domain-like Homeodomain-like 11
PA domain E set domains 11
AbrB/MazE/MraZ-like lambda repressor-like DNA-binding domains 11
Trigger factor ribosome-binding domain FKBP-like 11
P-loop containing nucleoside triphosphate hydrolases C-terminal UvrC-binding domain of UvrB 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) PRTase-like 11
MgtE N-terminal domain-like FliG 11
DNA clamp DNA clamp 11
Ribokinase-like Arabinanase/levansucrase/invertase 11
6-phosphogluconate dehydrogenase C-terminal domain-like ACT-like 11
Tetrapyrrole methylase all-alpha NTP pyrophosphatases 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain II 11
P-loop containing nucleoside triphosphate hydrolases TPR-like 11
CoA-dependent acyltransferases NAD(P)-binding Rossmann-fold domains 11
GAF domain-like Homodimeric domain of signal transducing histidine kinase 11
Alpha-L RNA-binding motif S-adenosyl-L-methionine-dependent methyltransferases 11
PheT/TilS domain Putative DNA-binding domain 11
Invasin/intimin cell-adhesion fragments E set domains 11
NAD(P)-binding Rossmann-fold domains Succinyl-CoA synthetase domains 11
Alkaline phosphatase-like Copper amine oxidase, domain N 11
GAF domain-like Nucleotide cyclase 11
Cna protein B-type domain Carboxypeptidase regulatory domain-like 11
Chorismate mutase II Aldolase 11
YojJ-like RuvA domain 2-like 11
Globin-like Riboflavin synthase domain-like 11
Invasin/intimin cell-adhesion fragments L domain-like 11
Riboflavin synthase domain-like Riboflavin synthase domain-like 11
Chaperone J-domain DnaJ/Hsp40 cysteine-rich domain 11
Class II aaRS and biotin synthetases Translation proteins 11
GIY-YIG endonuclease C-terminal UvrC-binding domain of UvrB 11
Cytochrome c oxidase subunit II-like, transmembrane region Cupredoxins 11
DNA repair protein MutS, domain III SMR domain-like 11
Carboxypeptidase regulatory domain-like PKD domain 11
Dihydropteroate synthetase-like Cobalamin (vitamin B12)-binding domain 11
RCC1/BLIP-II Copper amine oxidase, domain N 11
Ribonuclease PH domain 2-like Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 11
N-terminal domain of MutM-like DNA repair proteins Glucocorticoid receptor-like (DNA-binding domain) 11
PheT/TilS domain Anticodon-binding domain of PheRS 11
P-loop containing nucleoside triphosphate hydrolases Prokaryotic type KH domain (KH-domain type II) 11
Penicillin-binding protein 2x (pbp-2x), c-terminal domain Penicillin-binding protein 2x (pbp-2x), c-terminal domain 11
Subtilisin-like Fibronectin type III 11
Glutamyl tRNA-reductase catalytic, N-terminal domain Glutamyl tRNA-reductase dimerization domain 11
alpha-helical ferredoxin SCP-like 11
PUA domain-like alpha/beta knot 11
UbiD C-terminal domain-like UbiD C-terminal domain-like 11
Translation proteins PRC-barrel domain 11
Class II aaRS ABD-related C-terminal domain of ProRS 11
Glutathione synthetase ATP-binding domain-like Glutathione synthetase ATP-binding domain-like 11
Six-hairpin glycosidases Fibronectin type III 11
Thiolase-like CoA-dependent acyltransferases 11
TGS-like Class II aaRS and biotin synthetases 11
EspE N-terminal domain-like EspE N-terminal domain-like 11
Nucleic acid-binding proteins ArfGap/RecO-like zinc finger 11
Eukaryotic type KH-domain (KH-domain type I) HD-domain/PDEase-like 11
Mechanosensitive channel protein MscS (YggB), transmembrane region Sm-like ribonucleoproteins 11
2Fe-2S ferredoxin-like ADC-like 11
"Winged helix" DNA-binding domain LexA/Signal peptidase 11
Cytidine deaminase-like Dihydrofolate reductase-like 11
MoeA N-terminal region -like Molybdenum cofactor biosynthesis proteins 11
2Fe-2S ferredoxin-like 4Fe-4S ferredoxins 11
Class II aaRS and biotin synthetases C-terminal domain of ProRS 11
N-utilization substance G protein NusG, N-terminal domain Translation proteins SH3-like domain 11
CheY-binding domain of CheA CheW-like 11
Putative DNA-binding domain Probable bacterial effector-binding domain 11
DNA ligase/mRNA capping enzyme, catalytic domain BRCT domain 11
Homocysteine S-methyltransferase Dihydropteroate synthetase-like 11
2Fe-2S ferredoxin-like Formate dehydrogenase/DMSO reductase, domains 1-3 11
PDZ domain-like ClpP/crotonase 11
P-loop containing nucleoside triphosphate hydrolases Smc hinge domain 11
PUA domain-like Nucleotidylyl transferase 11
FAD/NAD(P)-binding domain HI0933 insert domain-like 11
PheT/TilS domain Class II aaRS and biotin synthetases 11
Acetyl-CoA synthetase-like Thiolase-like 11
Methylglyoxal synthase-like Cytidine deaminase-like 11
Nucleotidylyl transferase Alpha-L RNA-binding motif 11
LysM domain Barwin-like endoglucanases 11
Fe-S cluster assembly (FSCA) domain-like P-loop containing nucleoside triphosphate hydrolases 11
Homodimeric domain of signal transducing histidine kinase CheW-like 11
S-adenosylmethionine synthetase S-adenosylmethionine synthetase 11
C-terminal UvrC-binding domain of UvrB RuvA domain 2-like 11
Tex N-terminal region-like Ribonuclease H-like 11
Concanavalin A-like lectins/glucanases Carboxypeptidase regulatory domain-like 11
UBA-like Elongation factor Ts (EF-Ts), dimerisation domain 11
Ribosomal protein L6 Ribosomal protein L6 11
alpha-helical ferredoxin ARM repeat 11
P-loop containing nucleoside triphosphate hydrolases SMR domain-like 11
N-terminal domain of DnaB helicase P-loop containing nucleoside triphosphate hydrolases 11
Succinyl-CoA synthetase domains Succinyl-CoA synthetase domains 11
Obg GTP-binding protein N-terminal domain Obg GTP-binding protein C-terminal domain 11
Tubulin nucleotide-binding domain-like Tubulin C-terminal domain-like 11
Transcription factor NusA, N-terminal domain Prokaryotic type KH domain (KH-domain type II) 11
Aconitase iron-sulfur domain LeuD/IlvD-like 11
Cystatin/monellin Cystatin/monellin 11
S-adenosyl-L-methionine-dependent methyltransferases Putative methyltransferase TM0872, insert domain 11
Nucleotidyltransferase Poly A polymerase C-terminal region-like 11
Ribosomal protein S5 domain 2-like Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 11
Diaminopimelate epimerase-like Diaminopimelate epimerase-like 11
Tetrapyrrole methylase HemD-like 11
Class II aaRS and biotin synthetases Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) 11
Oligoxyloglucan reducing end-specific cellobiohydrolase Carbohydrate-binding domain 11
P-loop containing nucleoside triphosphate hydrolases EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 11
(Trans)glycosidases Starch-binding domain-like 11
DPP6 N-terminal domain-like Galactose-binding domain-like 11
Pectin lyase-like Pectin lyase-like 11
5' to 3' exonuclease, C-terminal subdomain Ribonuclease H-like 11
TGS-like ThrRS/AlaRS common domain 11
Phage tail proteins gp5 N-terminal domain-like 11
GAF domain-like C-terminal effector domain of the bipartite response regulators 11
Ribonuclease H-like P-loop containing nucleoside triphosphate hydrolases 11
Homocysteine S-methyltransferase Cobalamin (vitamin B12)-binding domain 11
P-loop containing nucleoside triphosphate hydrolases Helical scaffold and wing domains of SecA 11
lambda repressor-like DNA-binding domains SinR repressor dimerisation domain-like 11
Transcription factor NusA, N-terminal domain Nucleic acid-binding proteins 11
Nucleic acid-binding proteins S-adenosyl-L-methionine-dependent methyltransferases 11
P-loop containing nucleoside triphosphate hydrolases Homeodomain-like 11
P-loop containing nucleoside triphosphate hydrolases CBS-domain pair 11
NAD(P)-binding Rossmann-fold domains Serine metabolism enzymes domain 11
MoaD/ThiS Molybdopterin synthase subunit MoaE 11
Galactose mutarotase-like Putative glucosidase YicI, C-terminal domain 11
Acetyl-CoA synthetase-like PLP-dependent transferases 11
Ribokinase-like Concanavalin A-like lectins/glucanases 11
MesJ substrate recognition domain-like PheT/TilS domain 11
IlvD/EDD N-terminal domain-like LeuD/IlvD-like 11
PUA domain-like P-loop containing nucleoside triphosphate hydrolases 11
PA domain Invasin/intimin cell-adhesion fragments 11
Dihydropteroate synthetase-like Nitrite and sulphite reductase 4Fe-4S domain-like 11
Actin-like ATPase domain Heat shock protein 70kD (HSP70), C-terminal subdomain 11
Ribonuclease PH domain 2-like Ribonuclease PH domain 2-like 11
Sigma3 and sigma4 domains of RNA polymerase sigma factors NagB/RpiA/CoA transferase-like 11
Nucleotide-binding domain FAD/NAD(P)-binding domain 11
Nucleotide-binding domain Nucleotide-binding domain 11
Class II aaRS and biotin synthetases SufE/NifU 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
Metalloproteases ("zincins"), catalytic domain Galactose-binding domain-like 11
HisI-like all-alpha NTP pyrophosphatases 11
Sigma2 domain of RNA polymerase sigma factors C-terminal effector domain of the bipartite response regulators 11
Nucleotide-diphospho-sugar transferases S-adenosyl-L-methionine-dependent methyltransferases 11
CoA-transferase family III (CaiB/BaiF) CoA-transferase family III (CaiB/BaiF) 11
Nucleic acid-binding proteins DNA helicase RuvA subunit, C-terminal domain 11
Nucleic acid-binding proteins GAD domain-like 11
4'-phosphopantetheinyl transferase 4'-phosphopantetheinyl transferase 11
Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain Pyrimidine nucleoside phosphorylase C-terminal domain 11
Pre-protein crosslinking domain of SecA Helical scaffold and wing domains of SecA 11
FAD/NAD(P)-binding domain ISP domain 11
L domain-like E set domains 11
DNA ligase/mRNA capping enzyme, catalytic domain RuvA domain 2-like 11
2Fe-2S ferredoxin-like alpha-helical ferredoxin 11
Homocysteine S-methyltransferase Methionine synthase activation domain-like 11
beta-Galactosidase/glucuronidase domain Galactose mutarotase-like 11
Thiolase-like PLP-dependent transferases 11
NAD(P)-binding Rossmann-fold domains Glutamyl tRNA-reductase dimerization domain 11
Ribosomal protein S5 domain 2-like HSP90 C-terminal domain 11
lambda repressor-like DNA-binding domains Tetracyclin repressor-like, C-terminal domain 11
P-loop containing nucleoside triphosphate hydrolases HRDC-like 11
Class II aaRS and biotin synthetases GAD domain-like 11
LysM domain LysM domain 11
Nucleic acid-binding proteins Anticodon-binding domain of PheRS 11
Galactose-binding domain-like Galactose mutarotase-like 11
PRC-barrel domain PRC-barrel domain 11
Globin-like Ferredoxin reductase-like, C-terminal NADP-linked domain 11
ARM repeat Methylated DNA-protein cysteine methyltransferase domain 11
ACP-like PLP-dependent transferases 11
Class I glutamine amidotransferase-like Adenine nucleotide alpha hydrolases-like 11
NusB-like S-adenosyl-L-methionine-dependent methyltransferases 11
LysM domain Zn-dependent exopeptidases 11
Obg GTP-binding protein N-terminal domain P-loop containing nucleoside triphosphate hydrolases 11
P-loop containing nucleoside triphosphate hydrolases Adenine nucleotide alpha hydrolases-like 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase DNA mismatch repair protein MutL 11
GAF domain-like GAF domain-like 11
Class I glutamine amidotransferase-like GMP synthetase C-terminal dimerisation domain 11
Insert subdomain of RNA polymerase alpha subunit C-terminal domain of RNA polymerase alpha subunit 11
Nucleotide-diphospho-sugar transferases Nucleotide-diphospho-sugar transferases 11
Tex N-terminal region-like RuvA domain 2-like 11
Nitrite/Sulfite reductase N-terminal domain-like Nitrite/Sulfite reductase N-terminal domain-like 11
HprK N-terminal domain-like CBS-domain pair 11
Ribonuclease H-like RuvA domain 2-like 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain III 11
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 Nucleic acid-binding proteins 11
Ribosomal protein S5 domain 2-like DNA mismatch repair protein MutL 11
EspE N-terminal domain-like Nucleotide-diphospho-sugar transferases 11
Acyl-CoA N-acyltransferases (Nat) SCP-like 11
CheY-binding domain of CheA ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
CoA-dependent acyltransferases alpha/beta-Hydrolases 11
Homocysteine S-methyltransferase FAD-linked oxidoreductase 11
Trigger factor ribosome-binding domain Triger factor/SurA peptide-binding domain-like 11
Tetrapyrrole methylase Nitrite and sulphite reductase 4Fe-4S domain-like 11
UROD/MetE-like UROD/MetE-like 11
S13-like H2TH domain Glucocorticoid receptor-like (DNA-binding domain) 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) FMN-linked oxidoreductases 11
PHP domain-like RuvA domain 2-like 11
GAF domain-like CheY-like 11
alpha-helical ferredoxin Methylated DNA-protein cysteine methyltransferase domain 11
Methionine synthase domain Cobalamin (vitamin B12)-binding domain 11
Terpenoid cyclases/Protein prenyltransferases Terpenoid cyclases/Protein prenyltransferases 11
Fibronectin type III PKD domain 11
"Winged helix" DNA-binding domain NAD(P)-binding Rossmann-fold domains 11
Ribonuclease H-like Nucleic acid-binding proteins 11
Subtilisin-like Invasin/intimin cell-adhesion fragments 11
Concanavalin A-like lectins/glucanases Glycosyl hydrolase domain 11
Homocysteine S-methyltransferase Methionine synthase domain 11
Nucleotidylyl transferase Riboflavin kinase-like 11
PUA domain-like S-adenosyl-L-methionine-dependent methyltransferases 11
ALDH-like Dehydroquinate synthase-like 11
RBP11-like subunits of RNA polymerase C-terminal domain of RNA polymerase alpha subunit 11
GIY-YIG endonuclease P-loop containing nucleoside triphosphate hydrolases 11
CheY-like "Winged helix" DNA-binding domain 11
PreATP-grasp domain PreATP-grasp domain 11
PKD domain PKD domain 11
Terpenoid synthases Terpenoid synthases 11
Rho N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 11
Radical SAM enzymes Nitrogenase accessory factor-like 11
NAD(P)-binding Rossmann-fold domains 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
Glycosyl hydrolases family 6, cellulases Fibronectin type III 11
CbiG N-terminal domain-like CobE/GbiG C-terminal domain-like 11
Ribonuclease PH domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
HD-domain/PDEase-like ACT-like 11
PIN domain-like Ribonuclease H-like 11
PreATP-grasp domain Carbamoyl phosphate synthetase, large subunit connection domain 11
ARM repeat Methylated DNA-protein cysteine methyltransferase, C-terminal domain 11
PIN domain-like DNA/RNA polymerases 11
ClpP/crotonase PGBD-like 11
CarD-like TRCF domain-like 11
Nucleotide-diphospho-sugar transferases UDP-Glycosyltransferase/glycogen phosphorylase 11
Methionine synthase domain Methionine synthase activation domain-like 11
E set domains Glycosyl hydrolase domain 11
Glycosyl hydrolase domain Putative glucosidase YicI, C-terminal domain 11
Adenine nucleotide alpha hydrolases-like PheT/TilS domain 11
Acyl-CoA N-acyltransferases (Nat) Nucleotidylyl transferase 11
Thioredoxin-like Six-hairpin glycosidases 11
P-loop containing nucleoside triphosphate hydrolases Restriction endonuclease-like 11
WD40 repeat-like Copper amine oxidase, domain N 11
HprK N-terminal domain-like Thioesterase/thiol ester dehydrase-isomerase 11
Rhodanese/Cell cycle control phosphatase Rhodanese/Cell cycle control phosphatase 11
Copper amine oxidase, domain N vWA-like 11
ThrRS/AlaRS common domain Class II aaRS ABD-related 11
ABC transporter involved in vitamin B12 uptake, BtuC ABC transporter involved in vitamin B12 uptake, BtuC 11
"Winged helix" DNA-binding domain HprK N-terminal domain-like 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) Translation proteins 11
Arabinanase/levansucrase/invertase Ricin B-like lectins 11
DNA repair protein MutS, domain II DNA repair protein MutS, domain III 11
Putative DNA-binding domain Class II aaRS and biotin synthetases 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) ThrRS/AlaRS common domain 11
Sensory domain-like Homodimeric domain of signal transducing histidine kinase 11
(Trans)glycosidases Anthrax protective antigen 11
P-loop containing nucleoside triphosphate hydrolases CarD-like 11
"Winged helix" DNA-binding domain Class II aaRS and biotin synthetases 11
P-loop containing nucleoside triphosphate hydrolases TrpR-like 11
L domain-like L domain-like 11
Nucleotidylyl transferase tRNA-binding arm 11
TPR-like SMI1/KNR4-like 11
YajQ-like YajQ-like 11
Nucleic acid-binding proteins PheT/TilS domain 11
Thiamin pyrophosphokinase, catalytic domain Thiamin pyrophosphokinase, substrate-binding domain 11
Glycoside hydrolase/deacetylase Galactose-binding domain-like 11
Sec-C motif TPR-like 11
Putative DNA-binding domain Anticodon-binding domain of PheRS 11
Actin-like ATPase domain HD-domain/PDEase-like 11
FAD-binding/transporter-associated domain-like Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases tRNA-binding arm 11
Sigma3 and sigma4 domains of RNA polymerase sigma factors NTF2-like 11
Subtilisin-like Concanavalin A-like lectins/glucanases 11
Bacillus cereus metalloprotein-like Fe,Mn superoxide dismutase (SOD), N-terminal domain 11
S-adenosyl-L-methionine-dependent methyltransferases S-adenosyl-L-methionine-dependent methyltransferases 11
E set domains Starch-binding domain-like 11
Peptide methionine sulfoxide reductase Mss4-like 11
Nucleic acid-binding proteins BRCT domain 11
Dihydropteroate synthetase-like Methionine synthase activation domain-like 11
Ribosomal protein L7/12, oligomerisation (N-terminal) domain ClpS-like 11
CBS-domain pair Methyl-accepting chemotaxis protein (MCP) signaling domain 11
Copper amine oxidase, domain N NTF2-like 11
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 11
Subtilisin-like Carboxypeptidase regulatory domain-like 11
Glycosyl hydrolase domain Carbohydrate-binding domain 11
Subtilisin-like PKD domain 11
TGS-like ACT-like 11
Regulatory protein AraC "Helical backbone" metal receptor 11
Adenine nucleotide alpha hydrolases-like Argininosuccinate synthetase, C-terminal domain 11
FliG FliG 11
Ribonuclease H-like DNA/RNA polymerases 11
Dihydropteroate synthetase-like Methionine synthase domain 11
Class II aaRS and biotin synthetases C-terminal domain of transcriptional repressors 11
Ribosomal protein S5 domain 2-like Nucleic acid-binding proteins 11
AraD/HMP-PK domain-like NAD(P)-binding Rossmann-fold domains 11
Zinc beta-ribbon Prokaryotic SH3-related domain 11
Molybdenum cofactor biosynthesis proteins MoeA C-terminal domain-like 11
P-loop containing nucleoside triphosphate hydrolases Initiation factor IF2/eIF5b, domain 3 11
"Winged helix" DNA-binding domain PRTase-like 11
ACP-like Thiolase-like 11
Bacterial adhesins Cna protein B-type domain 11
Tetrapyrrole methylase S-adenosyl-L-methionine-dependent methyltransferases 11
Folate-binding domain Aminomethyltransferase beta-barrel domain 11
HD-domain/PDEase-like TGS-like 11
Ribonuclease PH domain 2-like Nucleic acid-binding proteins 11
lambda repressor-like DNA-binding domains Homeodomain-like 11
DNA repair protein MutS, domain II P-loop containing nucleoside triphosphate hydrolases 11
Histidine-containing phosphotransfer domain, HPT domain CheY-binding domain of CheA 11
SMI1/KNR4-like ARM repeat 11
RuvA domain 2-like BRCT domain 11
Metallo-hydrolase/oxidoreductase Flavoproteins 11
Nitrite and sulphite reductase 4Fe-4S domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) SIS domain 11
Molybdenum cofactor biosynthesis proteins CinA-like 11
Epsilon subunit of F1F0-ATP synthase N-terminal domain Epsilon subunit of F1F0-ATP synthase C-terminal domain 11
FMN-linked oxidoreductases Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 11
Periplasmic binding protein-like II Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain 11
Chaperone J-domain HSP40/DnaJ peptide-binding domain 11
MFS general substrate transporter PYP-like sensor domain (PAS domain) 11
DnaK suppressor protein DksA, alpha-hairpin domain Glucocorticoid receptor-like (DNA-binding domain) 11
5' to 3' exonuclease, C-terminal subdomain DNA/RNA polymerases 11
Fibronectin type III Copper amine oxidase, domain N 11
P-loop containing nucleoside triphosphate hydrolases TGS-like 11
Glutamyl tRNA-reductase catalytic, N-terminal domain NAD(P)-binding Rossmann-fold domains 11
E set domains Carbohydrate-binding domain 11
Protein kinase-like (PK-like) P-loop containing nucleoside triphosphate hydrolases 11
Actin-like ATPase domain Heat shock protein 70kD (HSP70), peptide-binding domain 11
Fibronectin type III Carboxypeptidase regulatory domain-like 11
Nucleotidyltransferase ACT-like 11
PLP-dependent transferases CoA-dependent acyltransferases 11
Glutathione synthetase ATP-binding domain-like Methylglyoxal synthase-like 11
Metallo-dependent phosphatases LysM domain 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase HSP90 C-terminal domain 11
Coiled-coil domain of nucleotide exchange factor GrpE Head domain of nucleotide exchange factor GrpE 11
Carbamoyl phosphate synthetase, small subunit N-terminal domain Class I glutamine amidotransferase-like 11
Glycosyl hydrolases family 6, cellulases Carbohydrate-binding domain 11
Single hybrid motif Single hybrid motif 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases Nucleic acid-binding proteins 11
Translation proteins EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 11
Copper amine oxidase, domain N Cysteine proteinases 11
Nucleotide cyclase HD-domain/PDEase-like 11
PHP domain-like AF1531-like 11
Concanavalin A-like lectins/glucanases Pectin lyase-like 11
Translation proteins Translation proteins 11
NEAT domain-like NEAT domain-like 11
GroEL-intermediate domain like GroEL apical domain-like 11
Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 4Fe-4S ferredoxins 11
Nucleotide cyclase EAL domain-like 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheW-like 11
YhbC-like, N-terminal domain YhbC-like, C-terminal domain 11
P-loop containing nucleoside triphosphate hydrolases TRCF domain-like 11
PrpR receptor domain-like P-loop containing nucleoside triphosphate hydrolases 11
CBS-domain pair Inosine monophosphate dehydrogenase (IMPDH) 11
Periplasmic binding protein-like II Periplasmic binding protein-like II 11
Concanavalin A-like lectins/glucanases (Trans)glycosidases 11
Pectin lyase-like TNF-like 11

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