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Domain combination pairs in Providencia stuartii MRSN 2154

All pairs of domain combinations at the superfamily level are listed here.
The identification of domain pairs does not account for the possibility of non-contiguous domains. Inserted, or interlaced, domains are seen as having a simple pair ordering.

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Adjacent domain pairs graph

Graph of adjacent domain pairs.


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Domain combination pairs

703 domain combination pairs.
Click on a column heading to sort that column, or the 'View' button to see domain architetures for that domain pair combination.

Superfamily (N) Superfamily (C) Number of occurrances Number unique
"Winged helix" DNA-binding domain Periplasmic binding protein-like II 361
P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases 3112
PapD-like Periplasmic chaperone C-domain 313
Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) 174
NAD(P)-binding Rossmann-fold domains Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 165
NAD(P)-binding Rossmann-fold domains 6-phosphogluconate dehydrogenase C-terminal domain-like 165
Actin-like ATPase domain Actin-like ATPase domain 166
Homodimeric domain of signal transducing histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 149
lambda repressor-like DNA-binding domains Periplasmic binding protein-like I 131
Thiamin diphosphate-binding fold (THDP-binding) DHS-like NAD/FAD-binding domain 121
Homeodomain-like Homeodomain-like 126
PreATP-grasp domain Glutathione synthetase ATP-binding domain-like 115
ABC transporter transmembrane region P-loop containing nucleoside triphosphate hydrolases 112
Multidrug resistance efflux transporter EmrE Multidrug resistance efflux transporter EmrE 112
Formate dehydrogenase/DMSO reductase, domains 1-3 ADC-like 104
CheY-like C-terminal effector domain of the bipartite response regulators 101
Thioredoxin-like GST C-terminal domain-like 91
Zn-dependent exopeptidases Bacterial exopeptidase dimerisation domain 81
Composite domain of metallo-dependent hydrolases Metallo-dependent hydrolases 84
Riboflavin synthase domain-like Ferredoxin reductase-like, C-terminal NADP-linked domain 85
Phage tail proteins gp5 N-terminal domain-like 73
"Winged helix" DNA-binding domain GntR ligand-binding domain-like 71
Formate/glycerate dehydrogenase catalytic domain-like NAD(P)-binding Rossmann-fold domains 73
Sigma2 domain of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 73
GroES-like NAD(P)-binding Rossmann-fold domains 72
Phage tail proteins Phage tail proteins 73
Homeodomain-like Tetracyclin repressor-like, C-terminal domain 71
FAD/NAD(P)-binding domain FAD-linked reductases, C-terminal domain 64
ACT-like ACT-like 65
Phage tail proteins Phage fibre proteins 62
P-loop containing nucleoside triphosphate hydrolases Translation proteins 66
gp5 N-terminal domain-like Phage fibre proteins 62
Nucleotidylyl transferase Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 66
RmlC-like cupins Homeodomain-like 62
PLP-binding barrel Alanine racemase C-terminal domain-like 63
MurD-like peptide ligases, catalytic domain MurD-like peptide ligases, peptide-binding domain 63
Nucleic acid-binding proteins Nucleic acid-binding proteins 54
Glutathione synthetase ATP-binding domain-like Rudiment single hybrid motif 52
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB transmembrane domain 52
P-loop containing nucleoside triphosphate hydrolases Homeodomain-like 54
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 52
"Winged helix" DNA-binding domain GAF domain-like 51
HAD-like Calcium ATPase, transmembrane domain M 55
Aminoacid dehydrogenase-like, N-terminal domain NAD(P)-binding Rossmann-fold domains 53
Homeodomain-like SIS domain 51
Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain 52
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 52
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 52
HlyD-like secretion proteins HlyD-like secretion proteins 52
Thiolase-like Thiolase-like 51
P-loop containing nucleoside triphosphate hydrolases MOP-like 51
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB transmembrane domain 52
Alpha-L RNA-binding motif Pseudouridine synthase 51
Calcium ATPase, transduction domain A Calcium ATPase, transmembrane domain M 55
PreATP-grasp domain Rudiment single hybrid motif 52
Calcium ATPase, transduction domain A HAD-like 55
Sm-like ribonucleoproteins Mechanosensitive channel protein MscS (YggB), C-terminal domain 42
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Ribosomal protein S5 domain 2-like 44
P-loop containing nucleoside triphosphate hydrolases EF-G C-terminal domain-like 44
PurM N-terminal domain-like PurM C-terminal domain-like 42
CBS-domain pair FAD-binding/transporter-associated domain-like 41
6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 42
P-loop containing nucleoside triphosphate hydrolases "Winged helix" DNA-binding domain 44
Riboflavin synthase domain-like 2Fe-2S ferredoxin-like 42
Mechanosensitive channel protein MscS (YggB), transmembrane region Sm-like ribonucleoproteins 42
"Winged helix" DNA-binding domain Chorismate lyase-like 41
Thiamin diphosphate-binding fold (THDP-binding) TK C-terminal domain-like 42
FAD/NAD(P)-binding domain FAD/NAD-linked reductases, dimerisation (C-terminal) domain 42
"Winged helix" DNA-binding domain Dimeric alpha+beta barrel 41
"Winged helix" DNA-binding domain NagB/RpiA/CoA transferase-like 41
Mechanosensitive channel protein MscS (YggB), transmembrane region Mechanosensitive channel protein MscS (YggB), C-terminal domain 42
lambda repressor-like DNA-binding domains LexA/Signal peptidase 41
6-phosphogluconate dehydrogenase C-terminal domain-like UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 41
P-loop containing nucleoside triphosphate hydrolases post-AAA+ oligomerization domain-like 42
Translation proteins EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 43
HCP-like HCP-like 43
NAD(P)-binding Rossmann-fold domains UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 41
PYP-like sensor domain (PAS domain) ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 44
Ferredoxin reductase-like, C-terminal NADP-linked domain 2Fe-2S ferredoxin-like 42
Aspartate receptor, ligand-binding domain Methyl-accepting chemotaxis protein (MCP) signaling domain 32
E set domains (Trans)glycosidases 33
P-loop containing nucleoside triphosphate hydrolases Ribosomal protein S5 domain 2-like 33
HD-domain/PDEase-like ACT-like 32
Triger factor/SurA peptide-binding domain-like FKBP-like 33
MurCD N-terminal domain MurD-like peptide ligases, peptide-binding domain 31
MurCD N-terminal domain MurD-like peptide ligases, catalytic domain 31
Nicotinate/Quinolinate PRTase N-terminal domain-like Nicotinate/Quinolinate PRTase C-terminal domain-like 31
Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 32
Phosphohistidine domain Phosphoenolpyruvate/pyruvate domain 33
Actin-like ATPase domain Heat shock protein 70kD (HSP70), peptide-binding domain 32
Acyl-CoA dehydrogenase NM domain-like Acyl-CoA dehydrogenase C-terminal domain-like 33
TrkA C-terminal domain-like TrkA C-terminal domain-like 32
Phosphoglucomutase, first 3 domains Phosphoglucomutase, first 3 domains 32
Phospholipase D/nuclease Phospholipase D/nuclease 33
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 32
Metallo-dependent phosphatases 5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain 32
"Winged helix" DNA-binding domain PLP-dependent transferases 31
Lysozyme-like beta-lactamase/transpeptidase-like 33
Nucleotidyltransferase ACT-like 32
Nucleic acid-binding proteins Translation proteins SH3-like domain 32
Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like 33
Phosphoglucomutase, first 3 domains Phosphoglucomutase, C-terminal domain 32
"Winged helix" DNA-binding domain Actin-like ATPase domain 33
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 32
Histidine-containing phosphotransfer domain, HPT domain ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 33
Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 32
Homeodomain-like Probable bacterial effector-binding domain 31
HMA, heavy metal-associated domain Calcium ATPase, transduction domain A 33
ValRS/IleRS/LeuRS editing domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 33
HMA, heavy metal-associated domain HAD-like 33
RuvA domain 2-like Nucleic acid-binding proteins 33
LuxS/MPP-like metallohydrolase LuxS/MPP-like metallohydrolase 32
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphohistidine domain 33
PYP-like sensor domain (PAS domain) Homodimeric domain of signal transducing histidine kinase 33
Double Clp-N motif P-loop containing nucleoside triphosphate hydrolases 32
HMA, heavy metal-associated domain Calcium ATPase, transmembrane domain M 33
Nucleic acid-binding proteins Class II aaRS and biotin synthetases 32
Enolase N-terminal domain-like Enolase C-terminal domain-like 31
ValRS/IleRS/LeuRS editing domain Nucleotidylyl transferase 33
Ribosomal protein S5 domain 2-like GHMP Kinase, C-terminal domain 31
P-loop containing nucleoside triphosphate hydrolases ACT-like 32
HD-domain/PDEase-like Nucleotidyltransferase 32
Class II aaRS and biotin synthetases Class II aaRS ABD-related 33
P-loop containing nucleoside triphosphate hydrolases Restriction endonuclease-like 22
Aminopeptidase/glucanase lid domain Zn-dependent exopeptidases 21
Histidine-containing phosphotransfer domain, HPT domain Homodimeric domain of signal transducing histidine kinase 22
CBS-domain pair MgtE membrane domain-like 22
GreA transcript cleavage protein, N-terminal domain FKBP-like 21
N-terminal domain of DnaB helicase P-loop containing nucleoside triphosphate hydrolases 21
ClpP/crotonase 6-phosphogluconate dehydrogenase C-terminal domain-like 21
Carbamate kinase-like Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 22
Single hybrid motif Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 22
Trypsin-like serine proteases PDZ domain-like 22
beta-N-acetylhexosaminidase-like domain (Trans)glycosidases 22
PIN domain-like 5' to 3' exonuclease, C-terminal subdomain 22
Ribosomal protein S5 domain 2-like Ribonuclease PH domain 2-like 22
DNA ligase/mRNA capping enzyme, catalytic domain Nucleic acid-binding proteins 22
FAD/NAD(P)-binding domain FAD/NAD(P)-binding domain 22
tRNA-binding arm Class II aaRS and biotin synthetases 21
EF-G C-terminal domain-like EF-G C-terminal domain-like 22
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphoenolpyruvate/pyruvate domain 22
Formyltransferase FMT C-terminal domain-like 22
HD-domain/PDEase-like TGS-like 21
HMA, heavy metal-associated domain HMA, heavy metal-associated domain 22
Ribonuclease H-like DNA/RNA polymerases 22
R1 subunit of ribonucleotide reductase, N-terminal domain PFL-like glycyl radical enzymes 21
Translation initiation factor IF3, N-terminal domain Translation initiation factor IF3, C-terminal domain 21
ClpP/crotonase NAD(P)-binding Rossmann-fold domains 21
Folate-binding domain Aminomethyltransferase beta-barrel domain 21
ThrRS/AlaRS common domain Class II aaRS and biotin synthetases 22
lambda integrase-like, N-terminal domain DNA breaking-rejoining enzymes 21
Methylated DNA-protein cysteine methyltransferase domain Methylated DNA-protein cysteine methyltransferase, C-terminal domain 22
N-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase 21
L30e-like alpha/beta knot 22
Carbamate kinase-like ACT-like 22
Creatinase/prolidase N-terminal domain Creatinase/aminopeptidase 21
Succinyl-CoA synthetase domains Succinyl-CoA synthetase domains 22
TGS-like ACT-like 21
Translation proteins ThrRS/AlaRS common domain 22
P-loop containing nucleoside triphosphate hydrolases EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 22
P-loop containing nucleoside triphosphate hydrolases C-terminal domain of alpha and beta subunits of F1 ATP synthase 21
Succinyl-CoA synthetase domains Glutathione synthetase ATP-binding domain-like 22
FAD-binding/transporter-associated domain-like FAD-linked oxidases, C-terminal domain 22
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheY-like 22
PLP-dependent transferases Ornithine decarboxylase C-terminal domain 22
2Fe-2S ferredoxin-like alpha-helical ferredoxin 21
beta-lactamase/transpeptidase-like Penicillin-binding protein associated domain 21
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 22
MurE/MurF N-terminal domain MurD-like peptide ligases, peptide-binding domain 21
Nucleotidyltransferase TGS-like 21
Homodimeric domain of signal transducing histidine kinase CheY-like 22
MurE/MurF N-terminal domain MurD-like peptide ligases, catalytic domain 21
Zinc beta-ribbon Zinc beta-ribbon 22
Aconitase iron-sulfur domain LeuD/IlvD-like 22
NAD(P)-binding Rossmann-fold domains Succinyl-CoA synthetase domains 22
Heat shock protein 70kD (HSP70), peptide-binding domain Heat shock protein 70kD (HSP70), C-terminal subdomain 21
Zinc beta-ribbon P-loop containing nucleoside triphosphate hydrolases 22
Ribosomal protein S5 domain 2-like Type II DNA topoisomerase 22
GAF domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 22
Nucleotidyltransferase Poly A polymerase C-terminal region-like 22
PDZ domain-like PDZ domain-like 22
Cupredoxins Cupredoxins 21
ACT-like NAD(P)-binding Rossmann-fold domains 22
PK beta-barrel domain-like PK C-terminal domain-like 21
Galactose mutarotase-like Six-hairpin glycosidases 22
CheY-like P-loop containing nucleoside triphosphate hydrolases 21
ISP domain Bet v1-like 21
PK beta-barrel domain-like Phosphoenolpyruvate/pyruvate domain 21
Zinc beta-ribbon DNA primase core 22
Aspartate/glutamate racemase Aspartate/glutamate racemase 21
cAMP-binding domain-like "Winged helix" DNA-binding domain 21
Penicillin binding protein dimerisation domain beta-lactamase/transpeptidase-like 21
Fe,Mn superoxide dismutase (SOD), N-terminal domain Fe,Mn superoxide dismutase (SOD), C-terminal domain 21
Actin-like ATPase domain Heat shock protein 70kD (HSP70), C-terminal subdomain 21
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Type II DNA topoisomerase 22
PYP-like sensor domain (PAS domain) Homeodomain-like 22
Nucleic acid-binding proteins P-loop containing nucleoside triphosphate hydrolases 22
N-acetylmuramoyl-L-alanine amidase-like PGBD-like 21
Ribosomal protein S5 domain 2-like EF-G C-terminal domain-like 21
Nucleotidyltransferase Nucleotidyltransferase substrate binding subunit/domain 22
IlvD/EDD N-terminal domain-like LeuD/IlvD-like 21
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex CoA-dependent acyltransferases 22
Glutathione synthetase ATP-binding domain-like Phosphohistidine domain 22
Single hybrid motif CoA-dependent acyltransferases 22
CheY-like Homeodomain-like 21
Nucleotide-diphospho-sugar transferases Trimeric LpxA-like enzymes 21
Phosphoenolpyruvate/pyruvate domain PK C-terminal domain-like 21
Glucocorticoid receptor-like (DNA-binding domain) P-loop containing nucleoside triphosphate hydrolases 22
Actin-like ATPase domain HD-domain/PDEase-like 21
Carbamate kinase-like NAD(P)-binding Rossmann-fold domains 22
Type II DNA topoisomerase GyrA/ParC C-terminal domain-like 21
Translation proteins EF-G C-terminal domain-like 22
HAMP domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 22
N-terminal domain of alpha and beta subunits of F1 ATP synthase P-loop containing nucleoside triphosphate hydrolases 21
TGS-like Class II aaRS ABD-related 11
Thioesterase/thiol ester dehydrase-isomerase Thioesterase/thiol ester dehydrase-isomerase 11
Glutamyl tRNA-reductase catalytic, N-terminal domain NAD(P)-binding Rossmann-fold domains 11
Nqo1 FMN-binding domain-like Nqo1C-terminal domain-like 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) FMN-linked oxidoreductases 11
THUMP domain-like Adenine nucleotide alpha hydrolases-like 11
P-loop containing nucleoside triphosphate hydrolases Prokaryotic type KH domain (KH-domain type II) 11
ALDH-like Thioesterase/thiol ester dehydrase-isomerase 11
TPR-like HCP-like 11
Epsilon subunit of F1F0-ATP synthase N-terminal domain Epsilon subunit of F1F0-ATP synthase C-terminal domain 11
2Fe-2S ferredoxin-like 4Fe-4S ferredoxins 11
N-utilization substance G protein NusG, N-terminal domain Translation proteins SH3-like domain 11
Translation proteins "Winged helix" DNA-binding domain 11
Glutathione synthetase ATP-binding domain-like Single hybrid motif 11
ALDH-like Dehydroquinate synthase-like 11
"Winged helix" DNA-binding domain C-terminal domain of transcriptional repressors 11
NAD(P)-binding Rossmann-fold domains LDH C-terminal domain-like 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Nucleotidylyl transferase 11
DNA ligase/mRNA capping enzyme, catalytic domain BRCT domain 11
Coiled-coil domain of nucleotide exchange factor GrpE Head domain of nucleotide exchange factor GrpE 11
Ribbon-helix-helix FAD-linked oxidoreductase 11
Class II aaRS and biotin synthetases SufE/NifU 11
PIN domain-like Ribonuclease H-like 11
P-loop containing nucleoside triphosphate hydrolases Phospholipase D/nuclease 11
YbaK/ProRS associated domain Class II aaRS ABD-related 11
Antibiotic binding domain of TipA-like multidrug resistance regulators Antibiotic binding domain of TipA-like multidrug resistance regulators 11
HIT-like HIT-like 11
HRDC-like HRDC-like 11
Nucleic acid-binding proteins PheT/TilS domain 11
PYP-like sensor domain (PAS domain) CheY-like 11
Nucleic acid-binding proteins DNA helicase RuvA subunit, C-terminal domain 11
GIY-YIG endonuclease RuvA domain 2-like 11
Translation proteins Initiation factor IF2/eIF5b, domain 3 11
GIY-YIG endonuclease C-terminal UvrC-binding domain of UvrB 11
FAD/NAD(P)-binding domain 4Fe-4S ferredoxins 11
Pseudouridine synthase PUA domain-like 11
NAD(P)-binding Rossmann-fold domains Acyl-CoA N-acyltransferases (Nat) 11
4Fe-4S ferredoxins Formate dehydrogenase/DMSO reductase, domains 1-3 11
GroEL equatorial domain-like GroEL apical domain-like 11
Periplasmic binding protein-like II GlnB-like 11
Transcription factor NusA, N-terminal domain Prokaryotic type KH domain (KH-domain type II) 11
PDZ domain-like ClpP/crotonase 11
HD-domain/PDEase-like P-loop containing nucleoside triphosphate hydrolases 11
C-terminal UvrC-binding domain of UvrB RuvA domain 2-like 11
RNase III domain-like dsRNA-binding domain-like 11
CheY-like PLP-dependent transferases 11
P-loop containing nucleoside triphosphate hydrolases TrpR-like 11
Leukotriene A4 hydrolase N-terminal domain Metalloproteases ("zincins"), catalytic domain 11
GAF domain-like Phosphoenolpyruvate/pyruvate domain 11
HAMP domain-like Homodimeric domain of signal transducing histidine kinase 11
Nucleotidylyl transferase tRNA-binding arm 11
GAF domain-like Homodimeric domain of signal transducing histidine kinase 11
UROD/MetE-like UROD/MetE-like 11
FMN-linked oxidoreductases FAD/NAD(P)-binding domain 11
S-adenosyl-L-methionine-dependent methyltransferases S-adenosyl-L-methionine-dependent methyltransferases 11
PPK N-terminal domain-like PHP14-like 11
DnaK suppressor protein DksA, alpha-hairpin domain Glucocorticoid receptor-like (DNA-binding domain) 11
HprK N-terminal domain-like Isocitrate/Isopropylmalate dehydrogenase-like 11
Ribbon-helix-helix ALDH-like 11
P-loop containing nucleoside triphosphate hydrolases Signal peptide-binding domain 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase DNA mismatch repair protein MutL 11
DNA repair protein MutS, domain III P-loop containing nucleoside triphosphate hydrolases 11
ValRS/IleRS/LeuRS editing domain tRNA-binding arm 11
Globin-like Ferredoxin reductase-like, C-terminal NADP-linked domain 11
FMT C-terminal domain-like NAD(P)-binding Rossmann-fold domains 11
Ada DNA repair protein, N-terminal domain (N-Ada 10) Homeodomain-like 11
Insert subdomain of RNA polymerase alpha subunit C-terminal domain of RNA polymerase alpha subunit 11
Chaperone J-domain HSP40/DnaJ peptide-binding domain 11
Dihydropteroate synthetase-like Methionine synthase domain 11
Nitrite/Sulfite reductase N-terminal domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 11
Nitrite/Sulfite reductase N-terminal domain-like Nitrite/Sulfite reductase N-terminal domain-like 11
His-Me finger endonucleases Ada DNA repair protein, N-terminal domain (N-Ada 10) 11
P-loop containing nucleoside triphosphate hydrolases FtsH protease domain-like 11
PEP carboxykinase N-terminal domain PEP carboxykinase-like 11
MFS general substrate transporter MFS general substrate transporter 11
FliG FliG 11
Zinc beta-ribbon "Winged helix" DNA-binding domain 11
Adenine nucleotide alpha hydrolases-like GMP synthetase C-terminal dimerisation domain 11
P-loop containing nucleoside triphosphate hydrolases HprK N-terminal domain-like 11
Glucose permease domain IIB Duplicated hybrid motif 11
Homeodomain-like Ribonuclease H-like 11
Nucleotide-binding domain FAD/NAD(P)-binding domain 11
Carbamoyl phosphate synthetase, large subunit connection domain Methylglyoxal synthase-like 11
Periplasmic binding protein-like II ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
S-adenosyl-L-methionine-dependent methyltransferases Putative methyltransferase TM0872, insert domain 11
Glycerol-3-phosphate (1)-acyltransferase Acetyl-CoA synthetase-like 11
HPr-like Phosphohistidine domain 11
TGS-like ThrRS/AlaRS common domain 11
S-adenosylmethionine synthetase S-adenosylmethionine synthetase 11
Globin-like Riboflavin synthase domain-like 11
Carbon-nitrogen hydrolase Carbon-nitrogen hydrolase 11
Class II aaRS and biotin synthetases YbaK/ProRS associated domain 11
PK beta-barrel domain-like 2Fe-2S ferredoxin-like 11
(Trans)glycosidases Chitinase insertion domain 11
Methionine synthase domain Methionine synthase activation domain-like 11
Siroheme synthase middle domains-like Tetrapyrrole methylase 11
Eukaryotic type KH-domain (KH-domain type I) Nucleic acid-binding proteins 11
Class I glutamine amidotransferase-like Adenine nucleotide alpha hydrolases-like 11
ACT-like Homeodomain-like 11
P-loop containing nucleoside triphosphate hydrolases TRCF domain-like 11
"Winged helix" DNA-binding domain MukF C-terminal domain-like 11
FKBP-like FKBP-like 11
Putative DNA-binding domain Translation proteins 11
Elongation factor Ts (EF-Ts), dimerisation domain Elongation factor Ts (EF-Ts), dimerisation domain 11
Calcium ATPase, transduction domain A Metal cation-transporting ATPase, ATP-binding domain N 11
Ribokinase-like Nucleotidylyl transferase 11
PreATP-grasp domain Methylglyoxal synthase-like 11
Class II aaRS and biotin synthetases C-terminal domain of transcriptional repressors 11
HesB-like domain Fe-S cluster assembly (FSCA) domain-like 11
Chorismate mutase II ACT-like 11
PUA domain-like alpha/beta knot 11
Homocysteine S-methyltransferase Dihydropteroate synthetase-like 11
Transcription factor NusA, N-terminal domain Rad51 N-terminal domain-like 11
TGS-like Class II aaRS and biotin synthetases 11
FAD-linked reductases, C-terminal domain 4Fe-4S ferredoxins 11
PLP-dependent transferases PLP-dependent transferases 11
Sensory domain-like Sporulation response regulatory protein Spo0B 11
Periplasmic binding protein-like II Lysozyme-like 11
lambda repressor-like DNA-binding domains Nucleotidylyl transferase 11
Rhodanese/Cell cycle control phosphatase P-loop containing nucleoside triphosphate hydrolases 11
Arabinanase/levansucrase/invertase Concanavalin A-like lectins/glucanases 11
Ribonuclease PH domain 2-like Ribonuclease PH domain 2-like 11
Carbamoyl phosphate synthetase, small subunit N-terminal domain Class I glutamine amidotransferase-like 11
Molybdenum cofactor biosynthesis proteins MoeA C-terminal domain-like 11
DNA/RNA polymerases Lesion bypass DNA polymerase (Y-family), little finger domain 11
Ribosomal protein S5 domain 2-like HSP90 C-terminal domain 11
Putative DNA-binding domain Anticodon-binding domain of PheRS 11
PYP-like sensor domain (PAS domain) Nucleotide cyclase 11
UBA-like Elongation factor Ts (EF-Ts), dimerisation domain 11
FMN-linked oxidoreductases Nucleotide-binding domain 11
Nqo1 FMN-binding domain-like alpha-helical ferredoxin 11
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 Nucleic acid-binding proteins 11
Periplasmic binding protein-like II Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) SIS domain 11
Trigger factor ribosome-binding domain FKBP-like 11
Thioredoxin-like Thioredoxin-like 11
CarD-like TRCF domain-like 11
Nucleic acid-binding proteins Prokaryotic type KH domain (KH-domain type II) 11
E set domains alpha/beta-Hydrolases 11
CBS-domain pair Inosine monophosphate dehydrogenase (IMPDH) 11
CheC-like Surface presentation of antigens (SPOA) 11
Lysozyme-like LysM domain 11
DNA-glycosylase Nudix 11
Rho N-terminal domain-like Nucleic acid-binding proteins 11
alpha-helical ferredoxin Nucleotide-binding domain 11
PurS-like PurM C-terminal domain-like 11
Nucleic acid-binding proteins ArfGap/RecO-like zinc finger 11
Ada DNA repair protein, N-terminal domain (N-Ada 10) Methylated DNA-protein cysteine methyltransferase domain 11
PYP-like sensor domain (PAS domain) Methyl-accepting chemotaxis protein (MCP) signaling domain 11
DNA repair protein MutS, domain II DNA repair protein MutS, domain III 11
P-loop containing nucleoside triphosphate hydrolases Initiation factor IF2/eIF5b, domain 3 11
Ribosomal protein S5 domain 2-like Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 11
E set domains E set domains 11
Glutamine synthetase, N-terminal domain Glutamine synthetase/guanido kinase 11
PTS-regulatory domain, PRD Phoshotransferase/anion transport protein 11
Peptidase/esterase 'gauge' domain alpha/beta-Hydrolases 11
DNA clamp DNA clamp 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) ThrRS/AlaRS common domain 11
NusB-like S-adenosyl-L-methionine-dependent methyltransferases 11
Macro domain-like Zn-dependent exopeptidases 11
GroES-like GroES-like 11
4Fe-4S ferredoxins 4Fe-4S ferredoxins 11
Nucleotidylyl transferase An anticodon-binding domain of class I aminoacyl-tRNA synthetases 11
NAD(P)-binding Rossmann-fold domains Glutathione synthetase ATP-binding domain-like 11
NAD(P)-binding Rossmann-fold domains Tetrapyrrole methylase 11
Nucleic acid-binding proteins Rad51 N-terminal domain-like 11
MOP-like MOP-like 11
Putative DNA-binding domain Initiation factor IF2/eIF5b, domain 3 11
Aspartate carbamoyltransferase, Regulatory-chain, N-terminal domain Aspartate carbamoyltransferase, Regulatory-chain, C-terminal domain 11
NAD(P)-binding Rossmann-fold domains 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
Nqo1 FMN-binding domain-like Nqo1 middle domain-like 11
Tryptophan synthase beta subunit-like PLP-dependent enzymes ACT-like 11
Glycerol-3-phosphate (1)-acyltransferase Acyl-CoA N-acyltransferases (Nat) 11
Cobalamin (vitamin B12)-binding domain Methionine synthase activation domain-like 11
Periplasmic chaperone C-domain FimD N-terminal domain-like 11
Translation proteins PRC-barrel domain 11
PTS system IIB component-like Phoshotransferase/anion transport protein 11
Pre-protein crosslinking domain of SecA Helical scaffold and wing domains of SecA 11
PUA domain-like P-loop containing nucleoside triphosphate hydrolases 11
Tubulin nucleotide-binding domain-like Tubulin C-terminal domain-like 11
Zinc beta-ribbon Prokaryotic SH3-related domain 11
Fibronectin type III Fibronectin type III 11
PurS-like PurM N-terminal domain-like 11
P-loop containing nucleoside triphosphate hydrolases TGS-like 11
P-loop containing nucleoside triphosphate hydrolases RecA protein, C-terminal domain 11
TPR-like TPR-like 11
Voltage-gated potassium channels NAD(P)-binding Rossmann-fold domains 11
H-NS histone-like proteins H-NS histone-like proteins 11
MgtE N-terminal domain-like MgtE membrane domain-like 11
Aconitase B, N-terminal domain Aconitase iron-sulfur domain 11
Flavoproteins Ferredoxin reductase-like, C-terminal NADP-linked domain 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Nucleic acid-binding proteins 11
Nucleotidylyl transferase Alpha-L RNA-binding motif 11
TrkA C-terminal domain-like FAD-binding/transporter-associated domain-like 11
HSP40/DnaJ peptide-binding domain HSP40/DnaJ peptide-binding domain 11
MetI-like MetI-like 11
"Winged helix" DNA-binding domain "Winged helix" DNA-binding domain 11
CheY-binding domain of CheA Homodimeric domain of signal transducing histidine kinase 11
Chaperone J-domain DnaJ/Hsp40 cysteine-rich domain 11
TolB, N-terminal domain Tricorn protease N-terminal domain 11
Prokaryotic type KH domain (KH-domain type II) Prokaryotic type KH domain (KH-domain type II) 11
Nitrite and sulphite reductase 4Fe-4S domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain II 11
Sensory domain-like PYP-like sensor domain (PAS domain) 11
Putative DNA-binding domain Class II aaRS and biotin synthetases 11
5' to 3' exonuclease, C-terminal subdomain Ribonuclease H-like 11
Homocysteine S-methyltransferase Methionine synthase domain 11
cAMP-binding domain-like CBS-domain pair 11
Rho N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 11
lambda repressor-like DNA-binding domains P-loop containing nucleoside triphosphate hydrolases 11
P-loop containing nucleoside triphosphate hydrolases Isocitrate/Isopropylmalate dehydrogenase-like 11
Ribosomal protein L6 Ribosomal protein L6 11
PurM N-terminal domain-like Class I glutamine amidotransferase-like 11
Rhodanese/Cell cycle control phosphatase Rhodanese/Cell cycle control phosphatase 11
Histidine-containing phosphotransfer domain, HPT domain CheW-like 11
PreATP-grasp domain Single hybrid motif 11
NagB/RpiA/CoA transferase-like NagB/RpiA/CoA transferase-like 11
DnaJ/Hsp40 cysteine-rich domain HSP40/DnaJ peptide-binding domain 11
Glutamyl tRNA-reductase catalytic, N-terminal domain Glutamyl tRNA-reductase dimerization domain 11
RuvA domain 2-like JAB1/MPN domain 11
Homocysteine S-methyltransferase Methionine synthase activation domain-like 11
NagB/RpiA/CoA transferase-like D-ribose-5-phosphate isomerase (RpiA), lid domain 11
Ribosomal protein S5 domain 2-like DNA mismatch repair protein MutL 11
Chaperone J-domain HSC20 (HSCB), C-terminal oligomerisation domain 11
Cytochrome c oxidase subunit II-like, transmembrane region Cupredoxins 11
2Fe-2S ferredoxin-like ADC-like 11
Prokaryotic type KH domain (KH-domain type II) Ribosomal protein S3 C-terminal domain 11
ThrRS/AlaRS common domain Class II aaRS ABD-related 11
FAD-binding/transporter-associated domain-like alpha-helical ferredoxin 11
CheY-binding domain of CheA ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Putative DNA-binding domain Antibiotic binding domain of TipA-like multidrug resistance regulators 11
Chemotaxis receptor methyltransferase CheR, N-terminal domain S-adenosyl-L-methionine-dependent methyltransferases 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Alpha subunit of glutamate synthase, C-terminal domain 11
E set domains Chitinase insertion domain 11
Glutathione synthetase ATP-binding domain-like Phosphoenolpyruvate/pyruvate domain 11
PrpR receptor domain-like Homeodomain-like 11
Nucleotidylyl transferase Ribosomal protein L25-like 11
Succinyl-CoA synthetase domains Acyl-CoA N-acyltransferases (Nat) 11
P-loop containing nucleoside triphosphate hydrolases Class I glutamine amidotransferase-like 11
5' to 3' exonuclease, C-terminal subdomain DNA/RNA polymerases 11
Caspase-like WD40 repeat-like 11
PurS-like Class I glutamine amidotransferase-like 11
Carbohydrate-binding domain beta-N-acetylhexosaminidase-like domain 11
MgtE N-terminal domain-like CBS-domain pair 11
Prokaryotic type KH domain (KH-domain type II) Rad51 N-terminal domain-like 11
P-loop containing nucleoside triphosphate hydrolases HRDC-like 11
Class II aaRS and biotin synthetases Anticodon-binding domain of PheRS 11
P-loop containing nucleoside triphosphate hydrolases Acyl-CoA N-acyltransferases (Nat) 11
YajQ-like YajQ-like 11
Ribbon-helix-helix Replication modulator SeqA, C-terminal DNA-binding domain 11
Nucleotidyltransferase substrate binding subunit/domain HD-domain/PDEase-like 11
Rad51 N-terminal domain-like Rad51 N-terminal domain-like 11
RuvA domain 2-like BRCT domain 11
HAD-like Ribosomal protein S5 domain 2-like 11
ACT-like PYP-like sensor domain (PAS domain) 11
NTF2-like Sec-C motif 11
Formyltransferase NAD(P)-binding Rossmann-fold domains 11
Methylglyoxal synthase-like Cytidine deaminase-like 11
Bacterial muramidases Lysozyme-like 11
Nucleotidyltransferase substrate binding subunit/domain ACT-like 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheW-like 11
NAD(P)-binding Rossmann-fold domains Isocitrate/Isopropylmalate dehydrogenase-like 11
"Winged helix" DNA-binding domain S-adenosyl-L-methionine-dependent methyltransferases 11
MFS general substrate transporter Proline/betaine transporter ProP, C-terminal cytoplasmic domain 11
4Fe-4S ferredoxins ADC-like 11
Nucleotidylyl transferase Nucleic acid-binding proteins 11
CorA soluble domain-like Magnesium transport protein CorA, transmembrane region 11
alpha/beta-Hydrolases S-adenosyl-L-methionine-dependent methyltransferases 11
Ribbon-helix-helix N-terminal domain of bifunctional PutA protein 11
lambda repressor-like DNA-binding domains PYP-like sensor domain (PAS domain) 11
Transcription factor NusA, N-terminal domain Nucleic acid-binding proteins 11
RBP11-like subunits of RNA polymerase C-terminal domain of RNA polymerase alpha subunit 11
Ribosomal protein S5 domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
P-loop containing nucleoside triphosphate hydrolases Zn-binding ribosomal proteins 11
Putative DNA-binding domain P-loop containing nucleoside triphosphate hydrolases 11
Carbamate kinase-like Acyl-CoA N-acyltransferases (Nat) 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
MOSC N-terminal domain-like PK beta-barrel domain-like 11
Homeodomain-like Methylated DNA-protein cysteine methyltransferase domain 11
Clavaminate synthase-like S-adenosyl-L-methionine-dependent methyltransferases 11
Carbohydrate-binding domain E set domains 11
Class I glutamine amidotransferase-like GMP synthetase C-terminal dimerisation domain 11
THUMP domain-like Rhodanese/Cell cycle control phosphatase 11
Trigger factor ribosome-binding domain Triger factor/SurA peptide-binding domain-like 11
Nucleotide-diphospho-sugar transferases PilZ domain-like 11
YhbC-like, N-terminal domain YhbC-like, C-terminal domain 11
YdgH-like YdgH-like 11
PheT/TilS domain Anticodon-binding domain of PheRS 11
Metal cation-transporting ATPase, ATP-binding domain N Calcium ATPase, transmembrane domain M 11
FGAM synthase PurL, linker domain PurM N-terminal domain-like 11
Aminoacid dehydrogenase-like, N-terminal domain Isocitrate/Isopropylmalate dehydrogenase-like 11
"Winged helix" DNA-binding domain Class II aaRS and biotin synthetases 11
Dihydropteroate synthetase-like Cobalamin (vitamin B12)-binding domain 11
YWTD domain YWTD domain 11
Bacterial adhesins Bacterial adhesins 11
Periplasmic binding protein-like II ACT-like 11
Nucleic acid-binding proteins S-adenosyl-L-methionine-dependent methyltransferases 11
FGAM synthase PurL, linker domain Class I glutamine amidotransferase-like 11
Glutathione synthetase ATP-binding domain-like Glutathione synthetase ATP-binding domain-like 11
PIN domain-like DNA/RNA polymerases 11
CheY-like CheY-like 11
TrmE connector domain P-loop containing nucleoside triphosphate hydrolases 11
Homocysteine S-methyltransferase Cobalamin (vitamin B12)-binding domain 11
EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain "Winged helix" DNA-binding domain 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Nucleotidylyl transferase 11
PYP-like sensor domain (PAS domain) P-loop containing nucleoside triphosphate hydrolases 11
PYP-like sensor domain (PAS domain) Histidine-containing phosphotransfer domain, HPT domain 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) Translation proteins 11
CheY-binding domain of CheA CheW-like 11
Chorismate mutase II 6-phosphogluconate dehydrogenase C-terminal domain-like 11
PH0987 N-terminal domain-like Cyclophilin-like 11
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 Eukaryotic type KH-domain (KH-domain type I) 11
Cytidine deaminase-like Dihydrofolate reductase-like 11
FabD/lysophospholipase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 11
DNA repair protein MutS, domain I P-loop containing nucleoside triphosphate hydrolases 11
Riboflavin synthase domain-like Riboflavin synthase domain-like 11
Glutathione synthetase ATP-binding domain-like Acyl-CoA N-acyltransferases (Nat) 11
Adenine nucleotide alpha hydrolases-like DHS-like NAD/FAD-binding domain 11
Sporulation response regulatory protein Spo0B ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
PurM N-terminal domain-like PurM N-terminal domain-like 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) PRTase-like 11
Nucleotidyltransferase PAP/OAS1 substrate-binding domain 11
Tex N-terminal region-like RuvA domain 2-like 11
P-loop containing nucleoside triphosphate hydrolases Pre-protein crosslinking domain of SecA 11
Nucleotidyltransferase Nucleotidyltransferase 11
PYP-like sensor domain (PAS domain) Sporulation response regulatory protein Spo0B 11
FGAM synthase PurL, linker domain PurM C-terminal domain-like 11
S13-like H2TH domain Glucocorticoid receptor-like (DNA-binding domain) 11
PurM C-terminal domain-like Class I glutamine amidotransferase-like 11
Nucleic acid-binding proteins Putative DNA-binding domain 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases Nucleic acid-binding proteins 11
Chorismate mutase II Periplasmic binding protein-like II 11
PPK N-terminal domain-like Phospholipase D/nuclease 11
N-terminal domain of MutM-like DNA repair proteins S13-like H2TH domain 11
Cryptochrome/photolyase, N-terminal domain Cryptochrome/photolyase FAD-binding domain 11
Zinc beta-ribbon DNA primase DnaG, C-terminal domain 11
HCP-like Sporulation related repeat 11
GroEL-intermediate domain like GroEL apical domain-like 11
GAF domain-like Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain 11
all-alpha NTP pyrophosphatases all-alpha NTP pyrophosphatases 11
AhpD-like AhpD-like 11
Enolase C-terminal domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 11
Homeodomain-like Methylated DNA-protein cysteine methyltransferase, C-terminal domain 11
Nqo5-like HydB/Nqo4-like 11
Cyclophilin-like Cyclophilin-like 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
Insert subdomain of RNA polymerase alpha subunit RBP11-like subunits of RNA polymerase 11
beta-N-acetylhexosaminidase-like domain E set domains 11
Thioredoxin-like TPR-like 11
DNA repair protein MutS, domain II P-loop containing nucleoside triphosphate hydrolases 11
P-loop containing nucleoside triphosphate hydrolases PRTase-like 11
Flavoproteins Riboflavin synthase domain-like 11
JAB1/MPN domain Cysteine proteinases 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain III 11
lambda repressor-like DNA-binding domains RmlC-like cupins 11
PTS system fructose IIA component-like PTS IIb component 11
HisI-like all-alpha NTP pyrophosphatases 11
(Trans)glycosidases Glycosyl hydrolase domain 11
MOSC N-terminal domain-like 2Fe-2S ferredoxin-like 11
Diaminopimelate epimerase-like Diaminopimelate epimerase-like 11
P-loop containing nucleoside triphosphate hydrolases C-terminal UvrC-binding domain of UvrB 11
DsbC/DsbG N-terminal domain-like Thioredoxin-like 11
Class II aaRS and biotin synthetases GAD domain-like 11
CheY-like Ornithine decarboxylase C-terminal domain 11
MetI-like P-loop containing nucleoside triphosphate hydrolases 11
Glutathione synthetase ATP-binding domain-like Methylglyoxal synthase-like 11
PTS system fructose IIA component-like HPr-like 11
Aconitase B, N-terminal domain LeuD/IlvD-like 11
Cation efflux protein transmembrane domain-like Cation efflux protein cytoplasmic domain-like 11
Tex N-terminal region-like Ribonuclease H-like 11
Cytidine deaminase-like Cytidine deaminase-like 11
Ribonuclease H-like RuvA domain 2-like 11
P-loop containing nucleoside triphosphate hydrolases Helical scaffold and wing domains of SecA 11
CheY-like Histidine-containing phosphotransfer domain, HPT domain 11
MoeA N-terminal region -like Molybdenum cofactor biosynthesis proteins 11
Nucleotide-diphospho-sugar transferases RmlC-like cupins 11
ACT-like Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 11
Adenine nucleotide alpha hydrolases-like Argininosuccinate synthetase, C-terminal domain 11
RuvA domain 2-like RuvA domain 2-like 11
GAF domain-like Phosphohistidine domain 11
FAD-binding/transporter-associated domain-like Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain 11
Ribonuclease PH domain 2-like Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 11
Domain of the SRP/SRP receptor G-proteins P-loop containing nucleoside triphosphate hydrolases 11
Adenine nucleotide alpha hydrolases-like Rhodanese/Cell cycle control phosphatase 11
"Winged helix" DNA-binding domain MOP-like 11
Sensory domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Single hybrid motif Single hybrid motif 11
RuvA domain 2-like DNA helicase RuvA subunit, C-terminal domain 11
PreATP-grasp domain Carbamoyl phosphate synthetase, large subunit connection domain 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases tRNA-binding arm 11
P-loop containing nucleoside triphosphate hydrolases Lysozyme-like 11
Nucleotidyltransferase substrate binding subunit/domain Nucleotidyltransferase substrate binding subunit/domain 11
Obg GTP-binding protein N-terminal domain P-loop containing nucleoside triphosphate hydrolases 11
PTS-regulatory domain, PRD PTS system IIB component-like 11
MoeA N-terminal region -like MoeA C-terminal domain-like 11
PGBD-like L,D-transpeptidase catalytic domain-like 11
Glutathione synthetase ATP-binding domain-like Carbamoyl phosphate synthetase, large subunit connection domain 11
Dihydropteroate synthetase-like Methionine synthase activation domain-like 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase HSP90 C-terminal domain 11
2Fe-2S ferredoxin-like Formate dehydrogenase/DMSO reductase, domains 1-3 11
Regulatory protein AraC Homeodomain-like 11
PTS system fructose IIA component-like Phosphohistidine domain 11
P-loop containing nucleoside triphosphate hydrolases beta-lactamase/transpeptidase-like 11
NAD(P)-binding Rossmann-fold domains TrkA C-terminal domain-like 11
Adenine nucleotide alpha hydrolases-like PheT/TilS domain 11
Carbon-nitrogen hydrolase Adenine nucleotide alpha hydrolases-like 11
NAD(P)-binding Rossmann-fold domains Glutamyl tRNA-reductase dimerization domain 11
LysM domain LysM domain 11
FAD/NAD(P)-binding domain HI0933 insert domain-like 11
PrpR receptor domain-like P-loop containing nucleoside triphosphate hydrolases 11
P-loop containing nucleoside triphosphate hydrolases Hypothetical protein YjiA, C-terminal domain 11
Ribosomal L11/L12e N-terminal domain Ribosomal protein L11, C-terminal domain 11
N-terminal domain of bifunctional PutA protein ALDH-like 11
ACT-like Formyltransferase 11
Ribonuclease PH domain 2-like Nucleic acid-binding proteins 11
NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains 11
Ribosomal protein L7/12, oligomerisation (N-terminal) domain ClpS-like 11
Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain Pyrimidine nucleoside phosphorylase C-terminal domain 11
Class II aaRS and biotin synthetases Translation proteins 11
alpha/beta-Hydrolases Ankyrin repeat 11
Methionine synthase domain Cobalamin (vitamin B12)-binding domain 11
Nucleic acid-binding proteins BRCT domain 11
PurM C-terminal domain-like PurM C-terminal domain-like 11
Formate/glycerate dehydrogenase catalytic domain-like ACT-like 11
P-loop containing nucleoside triphosphate hydrolases CBS-domain pair 11
N-terminal domain of MutM-like DNA repair proteins Glucocorticoid receptor-like (DNA-binding domain) 11
DNA ligase/mRNA capping enzyme, catalytic domain RuvA domain 2-like 11
Nucleotidylyl transferase Riboflavin kinase-like 11
N-terminal domain of bifunctional PutA protein FAD-linked oxidoreductase 11
OMPA-like OmpA-like 11
Histidine-containing phosphotransfer domain, HPT domain CheY-binding domain of CheA 11
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Pyrimidine nucleoside phosphorylase C-terminal domain 11
PapD-like FimD N-terminal domain-like 11
Thioredoxin-like FAD/NAD(P)-binding domain 11
Rudiment single hybrid motif Single hybrid motif 11
DNA primase core DNA primase DnaG, C-terminal domain 11
Molybdenum cofactor biosynthesis proteins CinA-like 11
CheY-like Methylesterase CheB, C-terminal domain 11
PUA domain-like Ribosomal protein S5 domain 2-like 11
FMN-linked oxidoreductases Alpha subunit of glutamate synthase, C-terminal domain 11
Carbohydrate-binding domain (Trans)glycosidases 11
PTS system fructose IIA component-like Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain 11
Carbamate kinase-like PUA domain-like 11
FAD-linked oxidoreductase ALDH-like 11
Hsp33 domain HSP33 redox switch-like 11
E set domains Glycosyl hydrolase domain 11
Homo-oligomeric flavin-containing Cys decarboxylases, HFCD CoaB-like 11
Ribonuclease H-like Nucleic acid-binding proteins 11
Adenine nucleotide alpha hydrolases-like MesJ substrate recognition domain-like 11
"Winged helix" DNA-binding domain LexA/Signal peptidase 11
HPr-like Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain 11
ClpP/crotonase ClpP/crotonase 11
Ribosomal protein S5 domain 2-like Nucleic acid-binding proteins 11
Nucleic acid-binding proteins Anticodon-binding domain of PheRS 11
MesJ substrate recognition domain-like PheT/TilS domain 11
Translation proteins Translation proteins 11
dsRNA-binding domain-like Ribosomal protein S5 domain 2-like 11
Adenine nucleotide alpha hydrolases-like Adenine nucleotide alpha hydrolases-like 11
PheT/TilS domain Putative DNA-binding domain 11
Prokaryotic type I DNA topoisomerase Zinc beta-ribbon 11
L9 N-domain-like Ribosomal protein L9 C-domain 11
Aldolase 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 11
Periplasmic binding protein-like II Homodimeric domain of signal transducing histidine kinase 11
Nqo1 middle domain-like Nqo1C-terminal domain-like 11
Band 7/SPFH domain Band 7/SPFH domain 11
FAD-linked oxidases, C-terminal domain alpha-helical ferredoxin 11
FMN-binding split barrel UbiD C-terminal domain-like 11
Acyl-CoA N-acyltransferases (Nat) Thioesterase/thiol ester dehydrase-isomerase 11
Ada DNA repair protein, N-terminal domain (N-Ada 10) Methylated DNA-protein cysteine methyltransferase, C-terminal domain 11
PHP14-like Phospholipase D/nuclease 11
GroEL equatorial domain-like GroEL-intermediate domain like 11
Metal cation-transporting ATPase, ATP-binding domain N HAD-like 11
P-loop containing nucleoside triphosphate hydrolases CarD-like 11
NAD(P)-binding Rossmann-fold domains Siroheme synthase middle domains-like 11
DNA primase core P-loop containing nucleoside triphosphate hydrolases 11
Ribonuclease H-like HRDC-like 11
Nucleotidylyl transferase P-loop containing nucleoside triphosphate hydrolases 11
Nudix Nudix 11
PreATP-grasp domain PreATP-grasp domain 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
"Winged helix" DNA-binding domain C-terminal domain of arginine repressor 11
Ribulose-phoshate binding barrel Ribulose-phoshate binding barrel 11
Homodimeric domain of signal transducing histidine kinase CheW-like 11
PurS-like FGAM synthase PurL, linker domain 11
Ribonuclease PH domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
Tex N-terminal region-like Nucleic acid-binding proteins 11
DeoB insert domain-like Alkaline phosphatase-like 11
PheT/TilS domain Class II aaRS and biotin synthetases 11
Class II aaRS and biotin synthetases Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) 11

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