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Domain combination pairs in Helicobacter acinonychis str. Sheeba

All pairs of domain combinations at the superfamily level are listed here.
The identification of domain pairs does not account for the possibility of non-contiguous domains. Inserted, or interlaced, domains are seen as having a simple pair ordering.

  • For a list of unique full length architectures for this genome click here (can be slow).
Adjacent domain pairs graph

Graph of adjacent domain pairs.


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Domain combination pairs

354 domain combination pairs.
Click on a column heading to sort that column, or the 'View' button to see domain architetures for that domain pair combination.

Superfamily (N) Superfamily (C) Number of occurrances Number unique
P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases 127
Actin-like ATPase domain Actin-like ATPase domain 74
Nucleotidylyl transferase Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 66
NAD(P)-binding Rossmann-fold domains Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 62
MurD-like peptide ligases, catalytic domain MurD-like peptide ligases, peptide-binding domain 53
P-loop containing nucleoside triphosphate hydrolases Translation proteins 54
Glutathione synthetase ATP-binding domain-like PreATP-grasp domain 54
Thiamin diphosphate-binding fold (THDP-binding) TK C-terminal domain-like 42
Composite domain of metallo-dependent hydrolases Metallo-dependent hydrolases 43
PLP-binding barrel Alanine racemase C-terminal domain-like 42
CheW-like CheY-like 42
Homodimeric domain of signal transducing histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 43
Ribosomal protein S5 domain 2-like P-loop containing nucleoside triphosphate hydrolases 44
NAD(P)-binding Rossmann-fold domains 6-phosphogluconate dehydrogenase C-terminal domain-like 31
Formate/glycerate dehydrogenase catalytic domain-like NAD(P)-binding Rossmann-fold domains 32
HMA, heavy metal-associated domain Calcium ATPase, transduction domain A 33
Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain 32
Calcium ATPase, transduction domain A HAD-like 33
Cytochrome c Cytochrome c 32
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB transmembrane domain 32
ValRS/IleRS/LeuRS editing domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 33
HMA, heavy metal-associated domain Calcium ATPase, transmembrane domain M 33
HMA, heavy metal-associated domain HAD-like 33
P-loop containing nucleoside triphosphate hydrolases EF-G C-terminal domain-like 32
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 32
Calcium ATPase, transduction domain A Calcium ATPase, transmembrane domain M 33
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 32
Translation proteins EF-G C-terminal domain-like 32
Calcium ATPase, transmembrane domain M HAD-like 33
Aminoacid dehydrogenase-like, N-terminal domain NAD(P)-binding Rossmann-fold domains 31
ValRS/IleRS/LeuRS editing domain Nucleotidylyl transferase 33
Class II aaRS and biotin synthetases Class II aaRS ABD-related 33
CheY-like C-terminal effector domain of the bipartite response regulators 31
Nucleic acid-binding proteins Class II aaRS and biotin synthetases 33
EF-G C-terminal domain-like EF-G C-terminal domain-like 32
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 32
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB transmembrane domain 32
Phospholipase D/nuclease Phospholipase D/nuclease 22
Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases 21
N-terminal domain of alpha and beta subunits of F1 ATP synthase P-loop containing nucleoside triphosphate hydrolases 21
Glutathione synthetase ATP-binding domain-like Rudiment single hybrid motif 21
Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like 22
Sm-like ribonucleoproteins Mechanosensitive channel protein MscS (YggB), C-terminal domain 22
HCP-like HCP-like 22
Thiolase-like Thiolase-like 21
LuxS/MPP-like metallohydrolase LuxS/MPP-like metallohydrolase 21
Zinc beta-ribbon DNA primase core 21
Mechanosensitive channel protein MscS (YggB), transmembrane region Mechanosensitive channel protein MscS (YggB), C-terminal domain 22
ABC transporter transmembrane region P-loop containing nucleoside triphosphate hydrolases 21
Translation proteins SH3-like domain Nucleic acid-binding proteins 22
Sigma2 domain of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 22
NAD(P)-binding Rossmann-fold domains ACT-like 22
Aldolase AFP III-like domain 21
CheC-like Surface presentation of antigens (SPOA) 22
Alpha-L RNA-binding motif Pseudouridine synthase 21
P-loop containing nucleoside triphosphate hydrolases "Winged helix" DNA-binding domain 22
Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) 21
Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 22
HSP40/DnaJ peptide-binding domain HSP40/DnaJ peptide-binding domain 22
Chaperone J-domain HSP40/DnaJ peptide-binding domain 22
PIN domain-like 5' to 3' exonuclease, C-terminal subdomain 22
Nucleotidylyl transferase An anticodon-binding domain of class I aminoacyl-tRNA synthetases 21
P-loop containing nucleoside triphosphate hydrolases C-terminal domain of alpha and beta subunits of F1 ATP synthase 21
Penicillin binding protein dimerisation domain beta-lactamase/transpeptidase-like 21
Nucleic acid-binding proteins RuvA domain 2-like 22
Phosphoglucomutase, first 3 domains Phosphoglucomutase, C-terminal domain 21
N-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase 21
DNA methylase specificity domain DNA methylase specificity domain 21
PreATP-grasp domain Rudiment single hybrid motif 21
Mechanosensitive channel protein MscS (YggB), transmembrane region Sm-like ribonucleoproteins 22
Double Clp-N motif P-loop containing nucleoside triphosphate hydrolases 21
Ribosomal protein S5 domain 2-like GHMP Kinase, C-terminal domain 21
Phosphoglucomutase, first 3 domains Phosphoglucomutase, first 3 domains 21
Class II aaRS and biotin synthetases ThrRS/AlaRS common domain 22
P-loop containing nucleoside triphosphate hydrolases Restriction endonuclease-like 22
P-loop containing nucleoside triphosphate hydrolases FtsH protease domain-like 21
Urease, gamma-subunit Urease, beta-subunit 21
PDZ domain-like PDZ domain-like 22
FAD-binding/transporter-associated domain-like FAD-linked oxidases, C-terminal domain 22
Nucleic acid-binding proteins Nucleic acid-binding proteins 22
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Ribosomal protein S5 domain 2-like 22
tRNA-binding arm Class II aaRS and biotin synthetases 21
Class II aaRS and biotin synthetases Anticodon-binding domain of PheRS 11
Nucleotide-diphospho-sugar transferases Trimeric LpxA-like enzymes 11
Glutamyl tRNA-reductase catalytic, N-terminal domain Glutamyl tRNA-reductase dimerization domain 11
Tubulin nucleotide-binding domain-like Tubulin C-terminal domain-like 11
ACT-like Formyltransferase 11
FMN-binding split barrel UbiD C-terminal domain-like 11
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 Eukaryotic type KH-domain (KH-domain type I) 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases tRNA-binding arm 11
Class II aaRS and biotin synthetases Translation proteins 11
FAD-linked oxidases, C-terminal domain alpha-helical ferredoxin 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases Nucleic acid-binding proteins 11
Nucleic acid-binding proteins DNA helicase RuvA subunit, C-terminal domain 11
FMN-binding split barrel FMN-binding split barrel 11
RNase III domain-like dsRNA-binding domain-like 11
Nucleotidylyl transferase Alpha-L RNA-binding motif 11
Calcium ATPase, transduction domain A Metal cation-transporting ATPase, ATP-binding domain N 11
Translation proteins Initiation factor IF2/eIF5b, domain 3 11
Fe,Mn superoxide dismutase (SOD), N-terminal domain Fe,Mn superoxide dismutase (SOD), C-terminal domain 11
HD-domain/PDEase-like Nucleotidyltransferase 11
PPK N-terminal domain-like PHP14-like 11
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 11
YjeF N-terminal domain-like Ribokinase-like 11
Periplasmic binding protein-like II Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain 11
Metal cation-transporting ATPase, ATP-binding domain N HAD-like 11
Creatinase/prolidase N-terminal domain Creatinase/aminopeptidase 11
DnaJ/Hsp40 cysteine-rich domain HSP40/DnaJ peptide-binding domain 11
4Fe-4S ferredoxins Formate dehydrogenase/DMSO reductase, domains 1-3 11
Ribonuclease H-like DNA/RNA polymerases 11
FAD-linked oxidoreductase ALDH-like 11
RBP11-like subunits of RNA polymerase C-terminal domain of RNA polymerase alpha subunit 11
Enolase N-terminal domain-like Enolase C-terminal domain-like 11
Ribosomal protein S5 domain 2-like Ribonuclease PH domain 2-like 11
Ribosomal protein S5 domain 2-like Type II DNA topoisomerase 11
Eukaryotic type KH-domain (KH-domain type I) HD-domain/PDEase-like 11
Restriction endonuclease-like S-adenosyl-L-methionine-dependent methyltransferases 11
Zn-dependent exopeptidases Bacterial exopeptidase dimerisation domain 11
N-utilization substance G protein NusG, N-terminal domain Translation proteins SH3-like domain 11
Calcium ATPase, transmembrane domain M Metal cation-transporting ATPase, ATP-binding domain N 11
PPK N-terminal domain-like Phospholipase D/nuclease 11
Fe-S cluster assembly (FSCA) domain-like P-loop containing nucleoside triphosphate hydrolases 11
Translation proteins PRC-barrel domain 11
beta and beta-prime subunits of DNA dependent RNA-polymerase beta and beta-prime subunits of DNA dependent RNA-polymerase 11
Nucleotide-diphospho-sugar transferases IpsF-like 11
YrdC/RibB RibA-like 11
Phosphohistidine domain Phosphoenolpyruvate/pyruvate domain 11
MurCD N-terminal domain MurD-like peptide ligases, catalytic domain 11
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 Nucleic acid-binding proteins 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase HSP90 C-terminal domain 11
PDZ domain-like ClpP/crotonase 11
Class I glutamine amidotransferase-like GMP synthetase C-terminal dimerisation domain 11
NAD(P)-binding Rossmann-fold domains TrkA C-terminal domain-like 11
P-loop containing nucleoside triphosphate hydrolases EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 11
2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain Alkaline phosphatase-like 11
CarD-like TRCF domain-like 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheW-like 11
Trigger factor ribosome-binding domain FKBP-like 11
Ribosomal protein S5 domain 2-like Nucleic acid-binding proteins 11
Nucleic acid-binding proteins Putative DNA-binding domain 11
Glutathione synthetase ATP-binding domain-like Phosphohistidine domain 11
GroEL equatorial domain-like GroEL apical domain-like 11
Fibronectin type III Fibronectin type III 11
Insert subdomain of RNA polymerase alpha subunit RBP11-like subunits of RNA polymerase 11
Insert subdomain of RNA polymerase alpha subunit C-terminal domain of RNA polymerase alpha subunit 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain ACT-like 11
Ribosomal protein S5 domain 2-like Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 11
Nucleotide-diphospho-sugar transferases RmlC-like cupins 11
2Fe-2S ferredoxin-like Formate dehydrogenase/DMSO reductase, domains 1-3 11
NAD(P)-binding Rossmann-fold domains Glutamyl tRNA-reductase dimerization domain 11
Ribonuclease PH domain 2-like Nucleic acid-binding proteins 11
IlvD/EDD N-terminal domain-like LeuD/IlvD-like 11
CheY-like P-loop containing nucleoside triphosphate hydrolases 11
RuvA domain 2-like BRCT domain 11
GIY-YIG endonuclease C-terminal UvrC-binding domain of UvrB 11
HD-domain/PDEase-like HD-domain/PDEase-like 11
Zinc beta-ribbon Zinc beta-ribbon 11
L9 N-domain-like Ribosomal protein L9 C-domain 11
PurM N-terminal domain-like PurM C-terminal domain-like 11
ADC synthase D-aminoacid aminotransferase-like PLP-dependent enzymes 11
N-terminal domain of DnaB helicase P-loop containing nucleoside triphosphate hydrolases 11
Flagellar hook protein flgE Flagellar hook protein flgE 11
Domain of the SRP/SRP receptor G-proteins Signal peptide-binding domain 11
Alpha-L RNA-binding motif S-adenosyl-L-methionine-dependent methyltransferases 11
Prokaryotic type KH domain (KH-domain type II) Ribosomal protein S3 C-terminal domain 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Type II DNA topoisomerase 11
Diaminopimelate epimerase-like Diaminopimelate epimerase-like 11
ValRS/IleRS/LeuRS editing domain tRNA-binding arm 11
UBA-like Elongation factor Ts (EF-Ts), dimerisation domain 11
L,D-transpeptidase catalytic domain-like NTF2-like 11
Bacterial fluorinating enzyme, N-terminal domain Bacterial fluorinating enzyme, C-terminal domain 11
CBS-domain pair Inosine monophosphate dehydrogenase (IMPDH) 11
Nucleotidylyl transferase Riboflavin kinase-like 11
Voltage-gated potassium channels NAD(P)-binding Rossmann-fold domains 11
GIY-YIG endonuclease RuvA domain 2-like 11
Nucleotidyltransferase TGS-like 11
Barwin-like endoglucanases Sporulation related repeat 11
Ribonuclease PH domain 2-like Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 11
Voltage-gated potassium channels TrkA C-terminal domain-like 11
Type II DNA topoisomerase GyrA/ParC C-terminal domain-like 11
Translation proteins Ribosomal protein S5 domain 2-like 11
Glutathione synthetase ATP-binding domain-like Methylglyoxal synthase-like 11
Ribosomal protein S5 domain 2-like HSP90 C-terminal domain 11
Glutathione synthetase ATP-binding domain-like Glutathione synthetase ATP-binding domain-like 11
P-loop containing nucleoside triphosphate hydrolases C-terminal UvrC-binding domain of UvrB 11
Methylated DNA-protein cysteine methyltransferase domain Methylated DNA-protein cysteine methyltransferase, C-terminal domain 11
P-loop containing nucleoside triphosphate hydrolases S-adenosyl-L-methionine-dependent methyltransferases 11
Aconitase B, N-terminal domain LeuD/IlvD-like 11
Histidine-containing phosphotransfer domain, HPT domain CheY-like 11
HD-domain/PDEase-like TGS-like 11
Translation proteins Translation proteins 11
Glutamine synthetase/guanido kinase GatB/YqeY motif 11
DNA ligase/mRNA capping enzyme, catalytic domain RuvA domain 2-like 11
MetI-like Periplasmic binding protein-like II 11
P-loop containing nucleoside triphosphate hydrolases TrpR-like 11
Peptide methionine sulfoxide reductase Mss4-like 11
Riboflavin synthase domain-like Riboflavin synthase domain-like 11
Carbamoyl phosphate synthetase, large subunit connection domain Methylglyoxal synthase-like 11
Pre-protein crosslinking domain of SecA Helical scaffold and wing domains of SecA 11
PreATP-grasp domain Carbamoyl phosphate synthetase, large subunit connection domain 11
Ribosomal protein L6 Ribosomal protein L6 11
P-loop containing nucleoside triphosphate hydrolases post-AAA+ oligomerization domain-like 11
NagB/RpiA/CoA transferase-like alpha-helical ferredoxin 11
Putative DNA-binding domain Class II aaRS and biotin synthetases 11
MurCD N-terminal domain MurD-like peptide ligases, peptide-binding domain 11
Domain of the SRP/SRP receptor G-proteins P-loop containing nucleoside triphosphate hydrolases 11
Ribulose-phoshate binding barrel Ribulose-phoshate binding barrel 11
LeuD/IlvD-like Aconitase iron-sulfur domain 11
Macro domain-like Zn-dependent exopeptidases 11
Nicotinate/Quinolinate PRTase N-terminal domain-like Nicotinate/Quinolinate PRTase C-terminal domain-like 11
Serine metabolism enzymes domain ACT-like 11
Nucleic acid-binding proteins BRCT domain 11
FKBP-like Triger factor/SurA peptide-binding domain-like 11
DNA ligase/mRNA capping enzyme, catalytic domain Nucleic acid-binding proteins 11
P-loop containing nucleoside triphosphate hydrolases TGS-like 11
Aspartate/glutamate racemase Aspartate/glutamate racemase 11
S-adenosyl-L-methionine-dependent methyltransferases Putative methyltransferase TM0872, insert domain 11
Actin-like ATPase domain Heat shock protein 70kD (HSP70), C-terminal subdomain 11
PIN domain-like Ribonuclease H-like 11
P-loop containing nucleoside triphosphate hydrolases TRCF domain-like 11
DNA clamp DNA clamp 11
R1 subunit of ribonucleotide reductase, N-terminal domain PFL-like glycyl radical enzymes 11
Glutathione synthetase ATP-binding domain-like Phosphoenolpyruvate/pyruvate domain 11
ParB/Sulfiredoxin KorB DNA-binding domain-like 11
ACT-like ACT-like 11
Class I glutamine amidotransferase-like Adenine nucleotide alpha hydrolases-like 11
P-loop containing nucleoside triphosphate hydrolases ACT-like 11
Translation initiation factor IF3, N-terminal domain Translation initiation factor IF3, C-terminal domain 11
Ribbon-helix-helix ACT-like 11
Lysozyme-like LysM domain 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
Nucleotidyltransferase Poly A polymerase C-terminal region-like 11
Formate/glycerate dehydrogenase catalytic domain-like Serine metabolism enzymes domain 11
Transcription factor NusA, N-terminal domain Prokaryotic type KH domain (KH-domain type II) 11
Transmembrane di-heme cytochromes a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 11
Heat shock protein 70kD (HSP70), peptide-binding domain Heat shock protein 70kD (HSP70), C-terminal subdomain 11
Nucleic acid-binding proteins GAD domain-like 11
Actin-like ATPase domain HD-domain/PDEase-like 11
CBS-domain pair FAD-binding/transporter-associated domain-like 11
Trigger factor ribosome-binding domain Triger factor/SurA peptide-binding domain-like 11
Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 11
FAD-binding/transporter-associated domain-like alpha-helical ferredoxin 11
PHP14-like Phospholipase D/nuclease 11
UDP-Glycosyltransferase/glycogen phosphorylase Bacterial hemolysins 11
Ribonuclease PH domain 2-like Ribonuclease PH domain 2-like 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheY-like 11
P-loop containing nucleoside triphosphate hydrolases SMR domain-like 11
Coiled-coil domain of nucleotide exchange factor GrpE Head domain of nucleotide exchange factor GrpE 11
YbaK/ProRS associated domain Class II aaRS ABD-related 11
Transcription factor NusA, N-terminal domain Nucleic acid-binding proteins 11
Carbamate kinase-like ACT-like 11
P-loop containing nucleoside triphosphate hydrolases Signal peptide-binding domain 11
Ribokinase-like Nucleotidylyl transferase 11
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 11
5' to 3' exonuclease, C-terminal subdomain Ribonuclease H-like 11
Glutathione synthetase ATP-binding domain-like Carbamoyl phosphate synthetase, large subunit connection domain 11
Obg GTP-binding protein N-terminal domain P-loop containing nucleoside triphosphate hydrolases 11
FAD-binding/transporter-associated domain-like Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain 11
P-loop containing nucleoside triphosphate hydrolases Hypothetical protein YjiA, C-terminal domain 11
S-adenosylmethionine synthetase S-adenosylmethionine synthetase 11
HMA, heavy metal-associated domain Metal cation-transporting ATPase, ATP-binding domain N 11
PUA domain-like P-loop containing nucleoside triphosphate hydrolases 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Nucleotidylyl transferase 11
YhbC-like, N-terminal domain YhbC-like, C-terminal domain 11
Nucleic acid-binding proteins P-loop containing nucleoside triphosphate hydrolases 11
Glutamine synthetase, N-terminal domain Glutamine synthetase/guanido kinase 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) Translation proteins 11
dsRNA-binding domain-like Ribosomal protein S5 domain 2-like 11
GreA transcript cleavage protein, N-terminal domain FKBP-like 11
Eukaryotic type KH-domain (KH-domain type I) Nucleic acid-binding proteins 11
Rho N-terminal domain-like Nucleic acid-binding proteins 11
Translation proteins ThrRS/AlaRS common domain 11
Histidine-containing phosphotransfer domain, HPT domain CheW-like 11
FliG FliG 11
TPR-like TPR-like 11
PIN domain-like DNA/RNA polymerases 11
PreATP-grasp domain PreATP-grasp domain 11
Rho N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 11
Histidine-containing phosphotransfer domain, HPT domain ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Chaperone J-domain DnaJ/Hsp40 cysteine-rich domain 11
HlyD-like secretion proteins HlyD-like secretion proteins 11
Acylphosphatase/BLUF domain-like YrdC/RibB 11
P-loop containing nucleoside triphosphate hydrolases Pre-protein crosslinking domain of SecA 11
HAMP domain-like Homodimeric domain of signal transducing histidine kinase 11
Histidine-containing phosphotransfer domain, HPT domain Homodimeric domain of signal transducing histidine kinase 11
TolB, N-terminal domain Tricorn protease N-terminal domain 11
Urease metallochaperone UreE, N-terminal domain Urease metallochaperone UreE, C-terminal domain 11
Formyltransferase FMT C-terminal domain-like 11
Nucleotidylyl transferase Nucleic acid-binding proteins 11
P-loop containing nucleoside triphosphate hydrolases Prokaryotic type KH domain (KH-domain type II) 11
Enolase C-terminal domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) SIS domain 11
Class II aaRS and biotin synthetases YbaK/ProRS associated domain 11
FAD/NAD(P)-binding domain FAD-linked reductases, C-terminal domain 11
Ribosomal protein S5 domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
5' to 3' exonuclease, C-terminal subdomain DNA/RNA polymerases 11
Actin-like ATPase domain Heat shock protein 70kD (HSP70), peptide-binding domain 11
DNA ligase/mRNA capping enzyme, catalytic domain BRCT domain 11
Class II aaRS and biotin synthetases GAD domain-like 11
HAMP domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Homo-oligomeric flavin-containing Cys decarboxylases, HFCD CoaB-like 11
FabD/lysophospholipase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 11
NAD(P)-binding Rossmann-fold domains Serine metabolism enzymes domain 11
Nucleic acid-binding proteins Prokaryotic type KH domain (KH-domain type II) 11
Carbamoyl phosphate synthetase, small subunit N-terminal domain Class I glutamine amidotransferase-like 11
Multidrug resistance efflux transporter EmrE Multidrug resistance efflux transporter EmrE 11
DNA repair protein MutS, domain III SMR domain-like 11
Homodimeric domain of signal transducing histidine kinase CheY-like 11
P-loop containing nucleoside triphosphate hydrolases Initiation factor IF2/eIF5b, domain 3 11
Cytidine deaminase-like Dihydrofolate reductase-like 11
Outer membrane efflux proteins (OEP) HlyD-like secretion proteins 11
Nucleic acid-binding proteins Anticodon-binding domain of PheRS 11
Class II aaRS and biotin synthetases Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) 11
EF-G C-terminal domain-like Ribosomal protein S5 domain 2-like 11
P-loop containing nucleoside triphosphate hydrolases Class I glutamine amidotransferase-like 11
Trypsin-like serine proteases PDZ domain-like 11
Nucleotidylyl transferase tRNA-binding arm 11
Ribonuclease PH domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
SufE/NifU Fe-S cluster assembly (FSCA) domain-like 11
DNA repair protein MutS, domain III P-loop containing nucleoside triphosphate hydrolases 11
Formate/glycerate dehydrogenase catalytic domain-like ACT-like 11
P-loop containing nucleoside triphosphate hydrolases CarD-like 11
Aconitase B, N-terminal domain Aconitase iron-sulfur domain 11
L30e-like alpha/beta knot 11
P-loop containing nucleoside triphosphate hydrolases RecA protein, C-terminal domain 11
Metallo-dependent phosphatases 5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain 11
HCP-like TPR-like 11
Putative DNA-binding domain Anticodon-binding domain of PheRS 11
UbiD C-terminal domain-like UbiD C-terminal domain-like 11
DeoB insert domain-like Alkaline phosphatase-like 11
GroES-like NAD(P)-binding Rossmann-fold domains 11
PHP domain-like AF1531-like 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) ThrRS/AlaRS common domain 11
C-terminal UvrC-binding domain of UvrB RuvA domain 2-like 11
ThrRS/AlaRS common domain Class II aaRS ABD-related 11
PreATP-grasp domain Methylglyoxal synthase-like 11
2Fe-2S ferredoxin-like alpha-helical ferredoxin 11
RuvA domain 2-like DNA helicase RuvA subunit, C-terminal domain 11
Adenine nucleotide alpha hydrolases-like GMP synthetase C-terminal dimerisation domain 11
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 11
Ribosomal L11/L12e N-terminal domain Ribosomal protein L11, C-terminal domain 11
P-loop containing nucleoside triphosphate hydrolases Helical scaffold and wing domains of SecA 11
Lysozyme-like beta-lactamase/transpeptidase-like 11
Glutamyl tRNA-reductase catalytic, N-terminal domain NAD(P)-binding Rossmann-fold domains 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
Ribosomal protein L7/12, oligomerisation (N-terminal) domain ClpS-like 11
Translation proteins EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 11
Homodimeric domain of signal transducing histidine kinase CheW-like 11
CorA soluble domain-like Magnesium transport protein CorA, transmembrane region 11
GroEL equatorial domain-like GroEL equatorial domain-like 11
2Fe-2S ferredoxin-like 4Fe-4S ferredoxins 11
Prokaryotic type I DNA topoisomerase Zinc beta-ribbon 11
Acyl-CoA N-acyltransferases (Nat) Acyl-CoA N-acyltransferases (Nat) 11
PUA domain-like Ribosomal protein S5 domain 2-like 11

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