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Domain combination pairs in Ruegeria sp. TM1040

All pairs of domain combinations at the superfamily level are listed here.
The identification of domain pairs does not account for the possibility of non-contiguous domains. Inserted, or interlaced, domains are seen as having a simple pair ordering.

  • For a list of unique full length architectures for this genome click here (can be slow).
Adjacent domain pairs graph

Graph of adjacent domain pairs.


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Domain combination pairs

687 domain combination pairs.
Click on a column heading to sort that column, or the 'View' button to see domain architetures for that domain pair combination.

Superfamily (N) Superfamily (C) Number of occurrances Number unique
"Winged helix" DNA-binding domain Periplasmic binding protein-like II 521
Homodimeric domain of signal transducing histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 3620
P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases 2811
Multidrug resistance efflux transporter EmrE Multidrug resistance efflux transporter EmrE 253
FAD/NAD(P)-binding domain FAD-linked reductases, C-terminal domain 196
NAD(P)-binding Rossmann-fold domains Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 194
"Winged helix" DNA-binding domain Dimeric alpha+beta barrel 191
P-loop containing nucleoside triphosphate hydrolases MOP-like 181
NAD(P)-binding Rossmann-fold domains 6-phosphogluconate dehydrogenase C-terminal domain-like 174
Homeodomain-like Tetracyclin repressor-like, C-terminal domain 161
PYP-like sensor domain (PAS domain) ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 1612
Composite domain of metallo-dependent hydrolases Metallo-dependent hydrolases 156
Thioredoxin-like GST C-terminal domain-like 151
PYP-like sensor domain (PAS domain) Homodimeric domain of signal transducing histidine kinase 1511
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheY-like 139
"Winged helix" DNA-binding domain GntR ligand-binding domain-like 121
Zn-dependent exopeptidases Bacterial exopeptidase dimerisation domain 121
Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) 126
Actin-like ATPase domain Actin-like ATPase domain 124
ABC transporter transmembrane region P-loop containing nucleoside triphosphate hydrolases 114
Folate-binding domain Aminomethyltransferase beta-barrel domain 113
Homodimeric domain of signal transducing histidine kinase CheY-like 117
PreATP-grasp domain Glutathione synthetase ATP-binding domain-like 105
CheY-like C-terminal effector domain of the bipartite response regulators 101
HAMP domain-like Methyl-accepting chemotaxis protein (MCP) signaling domain 102
Homeodomain-like Homeodomain-like 93
Acyl-CoA dehydrogenase NM domain-like Acyl-CoA dehydrogenase C-terminal domain-like 93
GroES-like NAD(P)-binding Rossmann-fold domains 93
Thiolase-like Thiolase-like 91
Sigma2 domain of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 94
FAD/NAD(P)-binding domain Folate-binding domain 82
"Winged helix" DNA-binding domain GAF domain-like 81
FAD/NAD(P)-binding domain Aminomethyltransferase beta-barrel domain 82
Class I glutamine amidotransferase-like Homeodomain-like 72
FAD/NAD(P)-binding domain FAD/NAD-linked reductases, dimerisation (C-terminal) domain 73
Glutathione synthetase ATP-binding domain-like Rudiment single hybrid motif 73
beta-Roll beta-Roll 76
PYP-like sensor domain (PAS domain) CheY-like 75
PreATP-grasp domain Rudiment single hybrid motif 73
Formate/glycerate dehydrogenase catalytic domain-like NAD(P)-binding Rossmann-fold domains 73
lambda repressor-like DNA-binding domains Periplasmic binding protein-like I 61
Enolase N-terminal domain-like Enolase C-terminal domain-like 61
Aminoacid dehydrogenase-like, N-terminal domain NAD(P)-binding Rossmann-fold domains 62
Nucleotide cyclase EAL domain-like 65
Nucleotidylyl transferase Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 66
P-loop containing nucleoside triphosphate hydrolases Translation proteins 65
lambda repressor-like DNA-binding domains RmlC-like cupins 62
Creatinase/prolidase N-terminal domain Creatinase/aminopeptidase 62
CheY-like P-loop containing nucleoside triphosphate hydrolases 63
Thiamin diphosphate-binding fold (THDP-binding) DHS-like NAD/FAD-binding domain 61
FAD-binding/transporter-associated domain-like FAD-linked oxidases, C-terminal domain 62
Chemotaxis receptor methyltransferase CheR, N-terminal domain S-adenosyl-L-methionine-dependent methyltransferases 54
MurD-like peptide ligases, catalytic domain MurD-like peptide ligases, peptide-binding domain 53
FAD-linked reductases, C-terminal domain Aminomethyltransferase beta-barrel domain 51
P-loop containing nucleoside triphosphate hydrolases Homeodomain-like 52
2Fe-2S ferredoxin-like CO dehydrogenase ISP C-domain like 52
MetI-like MetI-like 52
FAD-linked reductases, C-terminal domain Folate-binding domain 51
Cytochrome c Cytochrome c 54
"Winged helix" DNA-binding domain Chorismate lyase-like 51
Riboflavin synthase domain-like Ferredoxin reductase-like, C-terminal NADP-linked domain 54
CheY-like Homeodomain-like 52
Thiamin diphosphate-binding fold (THDP-binding) TK C-terminal domain-like 54
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB transmembrane domain 44
Sm-like ribonucleoproteins Mechanosensitive channel protein MscS (YggB), C-terminal domain 43
Nucleic acid-binding proteins Nucleic acid-binding proteins 44
HAMP domain-like Homodimeric domain of signal transducing histidine kinase 44
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 44
Ferredoxin reductase-like, C-terminal NADP-linked domain 2Fe-2S ferredoxin-like 43
Homeodomain-like SIS domain 41
Sensory domain-like Homodimeric domain of signal transducing histidine kinase 43
HAMP domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 44
Glutamine synthetase, N-terminal domain Glutamine synthetase/guanido kinase 41
Riboflavin synthase domain-like 2Fe-2S ferredoxin-like 43
Pheromone-binding domain of LuxR-like quorum-sensing transcription factors C-terminal effector domain of the bipartite response regulators 41
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 44
Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain 44
Sensory domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 43
FKBP-like Triger factor/SurA peptide-binding domain-like 43
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB transmembrane domain 44
Mechanosensitive channel protein MscS (YggB), transmembrane region Mechanosensitive channel protein MscS (YggB), C-terminal domain 43
PYP-like sensor domain (PAS domain) PYP-like sensor domain (PAS domain) 44
Ribosomal protein S5 domain 2-like P-loop containing nucleoside triphosphate hydrolases 44
CO dehydrogenase molybdoprotein N-domain-like Molybdenum cofactor-binding domain 41
Mechanosensitive channel protein MscS (YggB), transmembrane region Sm-like ribonucleoproteins 43
beta-Roll Hedgehog/intein (Hint) domain 44
P-loop containing nucleoside triphosphate hydrolases EF-G C-terminal domain-like 44
Class II aaRS and biotin synthetases Class II aaRS ABD-related 33
"Winged helix" DNA-binding domain PLP-dependent transferases 31
ValRS/IleRS/LeuRS editing domain Nucleotidylyl transferase 33
IlvD/EDD N-terminal domain-like LeuD/IlvD-like 31
PDZ domain-like PDZ domain-like 33
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Ribosomal protein S5 domain 2-like 33
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 33
Lysozyme-like beta-lactamase/transpeptidase-like 33
Glutathione synthetase ATP-binding domain-like Single hybrid motif 32
Rudiment single hybrid motif Single hybrid motif 32
CheY-like CheY-like 32
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex CoA-dependent acyltransferases 32
Formate dehydrogenase/DMSO reductase, domains 1-3 ADC-like 32
Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like 32
Translation proteins EF-G C-terminal domain-like 33
EF-G C-terminal domain-like EF-G C-terminal domain-like 33
Nucleotidylyl transferase An anticodon-binding domain of class I aminoacyl-tRNA synthetases 31
FMN-linked oxidoreductases FAD/NAD(P)-binding domain 33
"Winged helix" DNA-binding domain NagB/RpiA/CoA transferase-like 31
PurM N-terminal domain-like PurM C-terminal domain-like 33
"Winged helix" DNA-binding domain Actin-like ATPase domain 31
LuxS/MPP-like metallohydrolase LuxS/MPP-like metallohydrolase 32
Alpha-L RNA-binding motif Pseudouridine synthase 32
Single hybrid motif Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 32
PreATP-grasp domain Single hybrid motif 32
P-loop containing nucleoside triphosphate hydrolases Class I glutamine amidotransferase-like 31
(Trans)glycosidases Glycosyl hydrolase domain 32
TrkA C-terminal domain-like TrkA C-terminal domain-like 32
FAD-binding/transporter-associated domain-like CO dehydrogenase flavoprotein C-terminal domain-like 32
PLP-binding barrel Alanine racemase C-terminal domain-like 31
HAMP domain-like PYP-like sensor domain (PAS domain) 33
Methylesterase CheB, C-terminal domain Chemotaxis receptor methyltransferase CheR, N-terminal domain 33
lambda repressor-like DNA-binding domains LexA/Signal peptidase 31
Methylesterase CheB, C-terminal domain S-adenosyl-L-methionine-dependent methyltransferases 33
Nucleic acid-binding proteins RuvA domain 2-like 33
Metallo-dependent phosphatases 5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain 32
Lysozyme-like PGBD-like 32
ValRS/IleRS/LeuRS editing domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 33
ACT-like ACT-like 33
Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases 32
P-loop containing nucleoside triphosphate hydrolases "Winged helix" DNA-binding domain 33
cAMP-binding domain-like "Winged helix" DNA-binding domain 31
Single hybrid motif CoA-dependent acyltransferases 32
HMA, heavy metal-associated domain Calcium ATPase, transmembrane domain M 22
GroES-like GroES-like 21
Translation proteins EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 21
Glucocorticoid receptor-like (DNA-binding domain) P-loop containing nucleoside triphosphate hydrolases 22
ISP domain Bet v1-like 21
FabD/lysophospholipase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 22
PYP-like sensor domain (PAS domain) GAF domain-like 22
Nucleotidyltransferase ACT-like 22
Nqo1 middle domain-like Nqo1C-terminal domain-like 22
ClpP/crotonase ClpP/crotonase 21
GAF domain-like Homodimeric domain of signal transducing histidine kinase 22
Nicotinate/Quinolinate PRTase N-terminal domain-like Nicotinate/Quinolinate PRTase C-terminal domain-like 21
Homeodomain-like Methylated DNA-protein cysteine methyltransferase domain 22
P-loop containing nucleoside triphosphate hydrolases EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 21
Molybdenum cofactor biosynthesis proteins MoeA C-terminal domain-like 21
Penicillin binding protein dimerisation domain beta-lactamase/transpeptidase-like 22
Globin-like Methyl-accepting chemotaxis protein (MCP) signaling domain 21
ClpP/crotonase 6-phosphogluconate dehydrogenase C-terminal domain-like 21
Nitrite/Sulfite reductase N-terminal domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 22
Aldolase 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 21
HAMP domain-like CheY-like 22
Fe-S cluster assembly (FSCA) domain-like P-loop containing nucleoside triphosphate hydrolases 21
HAMP domain-like Nucleotide cyclase 22
Sensory domain-like PYP-like sensor domain (PAS domain) 21
Nqo1 FMN-binding domain-like Nqo1C-terminal domain-like 22
MurCD N-terminal domain MurD-like peptide ligases, peptide-binding domain 21
"Winged helix" DNA-binding domain "Winged helix" DNA-binding domain 21
HMA, heavy metal-associated domain Calcium ATPase, transduction domain A 22
Aminoacid dehydrogenase-like, N-terminal domain Isocitrate/Isopropylmalate dehydrogenase-like 21
Histidine-containing phosphotransfer domain, HPT domain Homodimeric domain of signal transducing histidine kinase 22
FAD/NAD(P)-binding domain HI0933 insert domain-like 21
MurE/MurF N-terminal domain MurD-like peptide ligases, catalytic domain 21
HMA, heavy metal-associated domain HAD-like 22
Molybdenum cofactor-binding domain Molybdenum cofactor-binding domain 21
Chemotaxis receptor methyltransferase CheR, N-terminal domain PYP-like sensor domain (PAS domain) 22
LeuD/IlvD-like Aconitase iron-sulfur domain 22
Thioesterase/thiol ester dehydrase-isomerase Thioesterase/thiol ester dehydrase-isomerase 21
CBS-domain pair FAD-binding/transporter-associated domain-like 21
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 21
Translation proteins SH3-like domain Nucleic acid-binding proteins 22
Thiamin diphosphate-binding fold (THDP-binding) Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 22
NAD(P)-binding Rossmann-fold domains Isocitrate/Isopropylmalate dehydrogenase-like 21
NAD(P)-binding Rossmann-fold domains UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 21
Rhodanese/Cell cycle control phosphatase Rhodanese/Cell cycle control phosphatase 22
NAD(P)-binding Rossmann-fold domains Succinyl-CoA synthetase domains 22
Methionine synthase domain Cobalamin (vitamin B12)-binding domain 22
MoeA N-terminal region -like Molybdenum cofactor biosynthesis proteins 21
PYP-like sensor domain (PAS domain) Methyl-accepting chemotaxis protein (MCP) signaling domain 22
MoeA N-terminal region -like MoeA C-terminal domain-like 21
CO dehydrogenase ISP C-domain like FAD-binding/transporter-associated domain-like 21
NAD(P)-binding Rossmann-fold domains ACT-like 22
Ribosomal protein S5 domain 2-like Type II DNA topoisomerase 22
Globin-like SpoIIaa-like 21
Periplasmic binding protein-like II Homodimeric domain of signal transducing histidine kinase 22
N-terminal domain of alpha and beta subunits of F1 ATP synthase P-loop containing nucleoside triphosphate hydrolases 21
Glutathione synthetase ATP-binding domain-like Phosphohistidine domain 22
Nqo1 FMN-binding domain-like Nqo1 middle domain-like 22
Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 21
MurCD N-terminal domain MurD-like peptide ligases, catalytic domain 21
Double Clp-N motif P-loop containing nucleoside triphosphate hydrolases 22
P-loop containing nucleoside triphosphate hydrolases C-terminal domain of alpha and beta subunits of F1 ATP synthase 21
Phosphohistidine domain Phosphoenolpyruvate/pyruvate domain 22
Formyltransferase FMT C-terminal domain-like 22
Periplasmic binding protein-like II ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 22
Glutathione synthetase ATP-binding domain-like Succinyl-CoA synthetase domains 22
Homeodomain-like Methylated DNA-protein cysteine methyltransferase, C-terminal domain 22
2Fe-2S ferredoxin-like alpha-helical ferredoxin 22
CO dehydrogenase ISP C-domain like CO dehydrogenase flavoprotein C-terminal domain-like 21
Nucleotidyltransferase Nucleotidyltransferase substrate binding subunit/domain 22
2Fe-2S ferredoxin-like FAD-binding/transporter-associated domain-like 21
Nucleic acid-binding proteins Class II aaRS and biotin synthetases 22
Phosphoglucomutase, first 3 domains Phosphoglucomutase, first 3 domains 21
Trypsin-like serine proteases PDZ domain-like 22
P-loop containing nucleoside triphosphate hydrolases cAMP-binding domain-like 22
Cobalamin (vitamin B12)-dependent enzymes Cobalamin (vitamin B12)-binding domain 21
HAD-like Calcium ATPase, transmembrane domain M 22
2Fe-2S ferredoxin-like CO dehydrogenase flavoprotein C-terminal domain-like 21
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 22
Type II DNA topoisomerase GyrA/ParC C-terminal domain-like 22
Carbamate kinase-like ACT-like 22
PH0987 N-terminal domain-like Cyclophilin-like 21
NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains 22
Histidine-containing phosphotransfer domain, HPT domain ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 22
6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 21
Nucleotidyltransferase Poly A polymerase C-terminal region-like 22
6-phosphogluconate dehydrogenase C-terminal domain-like UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 21
GAF domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 22
DNA methylase specificity domain DNA methylase specificity domain 21
Calcium ATPase, transduction domain A Calcium ATPase, transmembrane domain M 22
PYP-like sensor domain (PAS domain) C-terminal effector domain of the bipartite response regulators 21
Nucleic acid-binding proteins P-loop containing nucleoside triphosphate hydrolases 22
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Type II DNA topoisomerase 22
Methylesterase CheB, C-terminal domain PYP-like sensor domain (PAS domain) 22
lambda integrase-like, N-terminal domain DNA breaking-rejoining enzymes 21
PUA domain-like P-loop containing nucleoside triphosphate hydrolases 22
Ribosomal protein S5 domain 2-like Ribonuclease PH domain 2-like 22
Class II aaRS and biotin synthetases ThrRS/AlaRS common domain 22
4Fe-4S ferredoxins 2Fe-2S ferredoxin-like 22
tRNA-binding arm Class II aaRS and biotin synthetases 21
MurE/MurF N-terminal domain MurD-like peptide ligases, peptide-binding domain 21
P-loop containing nucleoside triphosphate hydrolases post-AAA+ oligomerization domain-like 22
Phosphoglucomutase, first 3 domains Phosphoglucomutase, C-terminal domain 21
ParB/Sulfiredoxin KorB DNA-binding domain-like 21
alpha-helical ferredoxin Nucleotide-binding domain 21
N-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase 21
ABC transporter transmembrane region cAMP-binding domain-like 22
2Fe-2S ferredoxin-like Formate dehydrogenase/DMSO reductase, domains 1-3 22
Calcium ATPase, transduction domain A HAD-like 22
Cytochrome c oxidase subunit II-like, transmembrane region Cupredoxins 22
ClpP/crotonase NAD(P)-binding Rossmann-fold domains 21
HlyD-like secretion proteins HlyD-like secretion proteins 22
Methylated DNA-protein cysteine methyltransferase domain Methylated DNA-protein cysteine methyltransferase, C-terminal domain 22
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 21
S-adenosyl-L-methionine-dependent methyltransferases PYP-like sensor domain (PAS domain) 22
FAD/NAD(P)-binding domain FAD/NAD(P)-binding domain 22
Tex N-terminal region-like Nucleic acid-binding proteins 11
NAD(P)-binding Rossmann-fold domains alpha/beta-Hydrolases 11
FMT C-terminal domain-like ACP-like 11
P-loop containing nucleoside triphosphate hydrolases Restriction endonuclease-like 11
FMT C-terminal domain-like Acetyl-CoA synthetase-like 11
PIN domain-like DNA/RNA polymerases 11
P-loop containing nucleoside triphosphate hydrolases TRCF domain-like 11
Chelatase Chelatase 11
Tex N-terminal region-like Ribonuclease H-like 11
RuvA domain 2-like BRCT domain 11
Ada DNA repair protein, N-terminal domain (N-Ada 10) Methylated DNA-protein cysteine methyltransferase domain 11
PYP-like sensor domain (PAS domain) Nucleotide cyclase 11
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphohistidine domain 11
Cation efflux protein transmembrane domain-like Cation efflux protein cytoplasmic domain-like 11
Galactose-binding domain-like beta-Roll 11
N-terminal domain of MutM-like DNA repair proteins Glucocorticoid receptor-like (DNA-binding domain) 11
RBP11-like subunits of RNA polymerase C-terminal domain of RNA polymerase alpha subunit 11
Chemotaxis receptor methyltransferase CheR, N-terminal domain ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Class I glutamine amidotransferase-like Adenine nucleotide alpha hydrolases-like 11
Nucleic acid-binding proteins PheT/TilS domain 11
GAF domain-like GAF domain-like 11
TrmE connector domain P-loop containing nucleoside triphosphate hydrolases 11
Translation proteins PRC-barrel domain 11
Thioredoxin-like Nqo1 middle domain-like 11
Thiolase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 11
Chaperone J-domain HSP40/DnaJ peptide-binding domain 11
Ribonuclease PH domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
Aldolase Single hybrid motif 11
beta-Galactosidase/glucuronidase domain (Trans)glycosidases 11
CBS-domain pair Inosine monophosphate dehydrogenase (IMPDH) 11
Periplasmic binding protein-like II Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain 11
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 Eukaryotic type KH-domain (KH-domain type I) 11
AGR C 984p-like AGR C 984p-like 11
alpha/beta-Hydrolases OsmC-like 11
RNase III domain-like dsRNA-binding domain-like 11
Class I glutamine amidotransferase-like GMP synthetase C-terminal dimerisation domain 11
Nucleotidyltransferase Nucleotidyltransferase 11
Formyltransferase Acetyl-CoA synthetase-like 11
Aspartate/glutamate racemase Aspartate/glutamate racemase 11
PurM N-terminal domain-like PurM N-terminal domain-like 11
FliG FliG 11
ACP-like alpha/beta-Hydrolases 11
Ribonuclease H-like RuvA domain 2-like 11
Glutathione synthetase ATP-binding domain-like Aldolase 11
Glycoside hydrolase/deacetylase UraD-Like 11
C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase Caspase-like 11
L30e-like alpha/beta knot 11
DNA ligase/mRNA capping enzyme, catalytic domain BRCT domain 11
FMT C-terminal domain-like Bacterial luciferase-like 11
S13-like H2TH domain Glucocorticoid receptor-like (DNA-binding domain) 11
Nucleic acid-binding proteins BRCT domain 11
Class II aaRS and biotin synthetases Translation proteins 11
Nucleic acid-binding proteins DNA helicase RuvA subunit, C-terminal domain 11
Hypothetical protein SAV1430 Fe-S cluster assembly (FSCA) domain-like 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) FMN-linked oxidoreductases 11
Methionine synthase domain Methionine synthase activation domain-like 11
PheT/TilS domain Anticodon-binding domain of PheRS 11
Nucleic acid-binding proteins Rad51 N-terminal domain-like 11
CarD-like TRCF domain-like 11
Anthrax protective antigen Hedgehog/intein (Hint) domain 11
Ribosomal protein S5 domain 2-like Nucleic acid-binding proteins 11
Carbamoyl phosphate synthetase, small subunit N-terminal domain Class I glutamine amidotransferase-like 11
HMA, heavy metal-associated domain HMA, heavy metal-associated domain 11
(Trans)glycosidases Class I glutamine amidotransferase-like 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) PRTase-like 11
ALDH-like ALDH-like 11
Formate/glycerate dehydrogenase catalytic domain-like ACT-like 11
Subtilisin-like Galactose-binding domain-like 11
TPR-like OmpA-like 11
NagB/RpiA/CoA transferase-like D-ribose-5-phosphate isomerase (RpiA), lid domain 11
Subtilisin-like beta-Roll 11
FabD/lysophospholipase-like ACP-like 11
Trigger factor ribosome-binding domain Triger factor/SurA peptide-binding domain-like 11
PK beta-barrel domain-like Phosphoenolpyruvate/pyruvate domain 11
NAD(P)-binding Rossmann-fold domains TrkA C-terminal domain-like 11
Chemotaxis receptor methyltransferase CheR, N-terminal domain Homodimeric domain of signal transducing histidine kinase 11
Periplasmic binding protein-like II OmpA-like 11
Ammonium transporter EAL domain-like 11
Thiolase-like alpha/beta-Hydrolases 11
FAD/NAD(P)-binding domain PurM N-terminal domain-like 11
Prokaryotic type I DNA topoisomerase Zinc beta-ribbon 11
FabD/lysophospholipase-like alpha/beta-Hydrolases 11
DNA repair protein MutS, domain II P-loop containing nucleoside triphosphate hydrolases 11
Ribosomal protein S5 domain 2-like DNA mismatch repair protein MutL 11
Nucleotidylyl transferase Alpha-L RNA-binding motif 11
Phospholipase D/nuclease Phospholipase D/nuclease 11
DNA repair protein MutS, domain II DNA repair protein MutS, domain III 11
Insert subdomain of RNA polymerase alpha subunit RBP11-like subunits of RNA polymerase 11
Macro domain-like Zn-dependent exopeptidases 11
Nucleotidyltransferase substrate binding subunit/domain Poly A polymerase C-terminal region-like 11
Sigma2 domain of RNA polymerase sigma factors TPR-like 11
Methylglyoxal synthase-like Cytidine deaminase-like 11
PK beta-barrel domain-like PK C-terminal domain-like 11
PheT/TilS domain Class II aaRS and biotin synthetases 11
Putative DNA-binding domain Class II aaRS and biotin synthetases 11
Translation proteins Translation proteins 11
Thiolase-like NAD(P)-binding Rossmann-fold domains 11
alpha/beta-Hydrolases Galactose-binding domain-like 11
Galactose mutarotase-like Glycosyl hydrolase domain 11
FAD-linked reductases, C-terminal domain 4Fe-4S ferredoxins 11
GroEL equatorial domain-like GroEL-intermediate domain like 11
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphoenolpyruvate/pyruvate domain 11
Bacterial muramidases Lysozyme-like 11
EF-G C-terminal domain-like Ribosomal protein S5 domain 2-like 11
YVTN repeat-like/Quinoprotein amine dehydrogenase Calcium-dependent phosphotriesterase 11
DNA ligase/mRNA capping enzyme, catalytic domain Nucleic acid-binding proteins 11
Heat shock protein 70kD (HSP70), peptide-binding domain Heat shock protein 70kD (HSP70), C-terminal subdomain 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) ThrRS/AlaRS common domain 11
Translation proteins Initiation factor IF2/eIF5b, domain 3 11
Prokaryotic type KH domain (KH-domain type II) Prokaryotic type KH domain (KH-domain type II) 11
"Winged helix" DNA-binding domain Phosphotyrosine protein phosphatases I 11
Galactose-binding domain-like beta-Galactosidase/glucuronidase domain 11
TPR-like P-loop containing nucleoside triphosphate hydrolases 11
RuvA domain 2-like RuvA domain 2-like 11
Prokaryotic type KH domain (KH-domain type II) Ribosomal protein S3 C-terminal domain 11
DnaJ/Hsp40 cysteine-rich domain HSP40/DnaJ peptide-binding domain 11
Protein kinase-like (PK-like) PLP-dependent transferases 11
Heme-dependent peroxidases Heme-dependent peroxidases 11
Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain Pyrimidine nucleoside phosphorylase C-terminal domain 11
HAMP domain-like GAF domain-like 11
Adenine nucleotide alpha hydrolases-like Argininosuccinate synthetase, C-terminal domain 11
Serine metabolism enzymes domain ACT-like 11
TPR-like Quinoprotein alcohol dehydrogenase-like 11
Transmembrane di-heme cytochromes a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 11
YjeF N-terminal domain-like Ribokinase-like 11
GAF domain-like Phosphoenolpyruvate/pyruvate domain 11
Transcription factor NusA, N-terminal domain Prokaryotic type KH domain (KH-domain type II) 11
CheW-like CheW-like 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Alpha subunit of glutamate synthase, C-terminal domain 11
P-loop containing nucleoside triphosphate hydrolases Hypothetical protein YjiA, C-terminal domain 11
Riboflavin synthase domain-like Riboflavin synthase domain-like 11
MgtE N-terminal domain-like CBS-domain pair 11
Trigger factor ribosome-binding domain FKBP-like 11
Glutathione synthetase ATP-binding domain-like Methylglyoxal synthase-like 11
HD-domain/PDEase-like TGS-like 11
S-adenosylmethionine synthetase S-adenosylmethionine synthetase 11
2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain Alkaline phosphatase-like 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) SIS domain 11
Aldolase post-HMGL domain-like 11
Thioredoxin-like Nqo1 FMN-binding domain-like 11
DeoB insert domain-like Alkaline phosphatase-like 11
MetI-like P-loop containing nucleoside triphosphate hydrolases 11
Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 11
Diaminopimelate epimerase-like Diaminopimelate epimerase-like 11
NAD(P)-binding Rossmann-fold domains ACP-like 11
Glutamine synthetase/guanido kinase GatB/YqeY motif 11
Ribonuclease PH domain 2-like Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 11
Ribosomal protein S5 domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
TPR-like TPR-like 11
L21p-like Rad51 N-terminal domain-like 11
Translation proteins Ribosomal protein S5 domain 2-like 11
beta-Roll Anthrax protective antigen 11
NAD(P)-binding Rossmann-fold domains Thioesterase/thiol ester dehydrase-isomerase 11
GreA transcript cleavage protein, N-terminal domain FKBP-like 11
NAD(P)-binding Rossmann-fold domains Glutathione synthetase ATP-binding domain-like 11
DNA repair protein MutS, domain III P-loop containing nucleoside triphosphate hydrolases 11
Bacterial luciferase-like ACP-like 11
YegP-like YegP-like 11
Transcription factor NusA, N-terminal domain Nucleic acid-binding proteins 11
P-loop containing nucleoside triphosphate hydrolases Helical scaffold and wing domains of SecA 11
PLP-dependent transferases PLP-dependent transferases 11
P-loop containing nucleoside triphosphate hydrolases FtsH protease domain-like 11
P-loop containing nucleoside triphosphate hydrolases Smc hinge domain 11
FabD/lysophospholipase-like NAD(P)-binding Rossmann-fold domains 11
Histidine-containing phosphotransfer domain, HPT domain CheW-like 11
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Pyrimidine nucleoside phosphorylase C-terminal domain 11
Ribonuclease H-like DNA/RNA polymerases 11
Obg GTP-binding protein N-terminal domain P-loop containing nucleoside triphosphate hydrolases 11
HD-domain/PDEase-like ACT-like 11
Nucleotide-diphospho-sugar transferases IpsF-like 11
Poly A polymerase C-terminal region-like ACT-like 11
YlxR-like L30e-like 11
Sensory domain-like HAMP domain-like 11
S-adenosyl-L-methionine-dependent methyltransferases ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Ada DNA repair protein, N-terminal domain (N-Ada 10) Homeodomain-like 11
Transcription factor NusA, N-terminal domain Rad51 N-terminal domain-like 11
C-terminal effector domain of the bipartite response regulators alpha/beta-Hydrolases 11
dUTPase-like dUTPase-like 11
Domain of the SRP/SRP receptor G-proteins P-loop containing nucleoside triphosphate hydrolases 11
Periplasmic binding protein-like II Periplasmic binding protein-like II 11
Nucleic acid-binding proteins Anticodon-binding domain of PheRS 11
beta-N-acetylhexosaminidase-like domain (Trans)glycosidases 11
Thioredoxin-like Nqo1C-terminal domain-like 11
Cryptochrome/photolyase, N-terminal domain Cryptochrome/photolyase FAD-binding domain 11
UBA-like Elongation factor Ts (EF-Ts), dimerisation domain 11
Nucleotide-diphospho-sugar transferases RmlC-like cupins 11
NAD(P)-binding Rossmann-fold domains LDH C-terminal domain-like 11
PUA domain-like alpha/beta knot 11
Class II aaRS and biotin synthetases Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) 11
P-loop containing nucleoside triphosphate hydrolases Signal peptide-binding domain 11
Protein kinase-like (PK-like) Duplicated hybrid motif 11
DNA clamp DNA clamp 11
DNA/RNA polymerases Lesion bypass DNA polymerase (Y-family), little finger domain 11
Ribosomal protein L7/12, oligomerisation (N-terminal) domain ClpS-like 11
alpha-helical ferredoxin Formate dehydrogenase/DMSO reductase, domains 1-3 11
Translation initiation factor IF3, N-terminal domain Translation initiation factor IF3, C-terminal domain 11
dsRNA-binding domain-like Ribosomal protein S5 domain 2-like 11
Nucleotidyltransferase TGS-like 11
CheY-like PP2C-like 11
P-loop containing nucleoside triphosphate hydrolases C-terminal UvrC-binding domain of UvrB 11
Nitrite and sulphite reductase 4Fe-4S domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 11
OmpA-like C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase 11
"Winged helix" DNA-binding domain LexA/Signal peptidase 11
Dihydropteroate synthetase-like Cobalamin (vitamin B12)-binding domain 11
Methylesterase CheB, C-terminal domain ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
2Fe-2S ferredoxin-like ADC-like 11
4Fe-4S ferredoxins Formate dehydrogenase/DMSO reductase, domains 1-3 11
Nucleotidyltransferase substrate binding subunit/domain ACT-like 11
CheY-like Histidine-containing phosphotransfer domain, HPT domain 11
Fumarate reductase respiratory complex transmembrane subunits Nucleotide cyclase 11
HRDC-like HRDC-like 11
Putative DNA-binding domain Anticodon-binding domain of PheRS 11
GroEL equatorial domain-like GroEL apical domain-like 11
Adenine nucleotide alpha hydrolases-like GMP synthetase C-terminal dimerisation domain 11
Formyltransferase ACP-like 11
Nucleic acid-binding proteins Prokaryotic type KH domain (KH-domain type II) 11
6-phosphogluconate dehydrogenase C-terminal domain-like Thioesterase/thiol ester dehydrase-isomerase 11
Sensory domain-like Methyl-accepting chemotaxis protein (MCP) signaling domain 11
FMN-linked oxidoreductases Nucleotide-binding domain 11
Single hybrid motif Thiamin diphosphate-binding fold (THDP-binding) 11
Sigma3 and sigma4 domains of RNA polymerase sigma factors TPR-like 11
Actin-like ATPase domain HD-domain/PDEase-like 11
FAD/NAD(P)-binding domain PurM C-terminal domain-like 11
Cytidine deaminase-like Dihydrofolate reductase-like 11
TolB, N-terminal domain Tricorn protease N-terminal domain 11
TPR-like Caspase-like 11
Duplicated hybrid motif PLP-dependent transferases 11
5' to 3' exonuclease, C-terminal subdomain Ribonuclease H-like 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain ACT-like 11
YhbC-like, N-terminal domain YhbC-like, C-terminal domain 11
FMN-linked oxidoreductases 4Fe-4S ferredoxins 11
DNA repair protein MutS, domain I P-loop containing nucleoside triphosphate hydrolases 11
PIN domain-like Ribonuclease H-like 11
N-terminal domain of DnaB helicase P-loop containing nucleoside triphosphate hydrolases 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Nucleotidylyl transferase 11
Nucleotidylyl transferase tRNA-binding arm 11
Urease metallochaperone UreE, N-terminal domain Urease metallochaperone UreE, C-terminal domain 11
all-alpha NTP pyrophosphatases all-alpha NTP pyrophosphatases 11
P-loop containing nucleoside triphosphate hydrolases HRDC-like 11
DNA-glycosylase Nudix 11
Class II aaRS and biotin synthetases GAD domain-like 11
FAD-binding/transporter-associated domain-like Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain 11
Single hybrid motif Single hybrid motif 11
TerB-like Chaperone J-domain 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
PRC-barrel domain PRC-barrel domain 11
Ammonium transporter Nucleotide cyclase 11
GAF domain-like Nucleotide cyclase 11
CoA-transferase family III (CaiB/BaiF) CoA-transferase family III (CaiB/BaiF) 11
P-loop containing nucleoside triphosphate hydrolases Initiation factor IF2/eIF5b, domain 3 11
ALDH-like Thioesterase/thiol ester dehydrase-isomerase 11
Aconitase B, N-terminal domain Aconitase iron-sulfur domain 11
TGS-like ThrRS/AlaRS common domain 11
NusB-like S-adenosyl-L-methionine-dependent methyltransferases 11
P-loop containing nucleoside triphosphate hydrolases RecA protein, C-terminal domain 11
Glutathione synthetase ATP-binding domain-like Glutathione synthetase ATP-binding domain-like 11
CheY-like Nucleotide cyclase 11
Carbamate kinase-like PUA domain-like 11
Chaperone J-domain DnaJ/Hsp40 cysteine-rich domain 11
5' to 3' exonuclease, C-terminal subdomain DNA/RNA polymerases 11
PDZ domain-like ClpP/crotonase 11
S-adenosyl-L-methionine-dependent methyltransferases Putative methyltransferase TM0872, insert domain 11
Carbon-nitrogen hydrolase Adenine nucleotide alpha hydrolases-like 11
Probable ACP-binding domain of malonyl-CoA ACP transacylase NAD(P)-binding Rossmann-fold domains 11
4Fe-4S ferredoxins Riboflavin synthase domain-like 11
PUA domain-like Ribosomal protein S5 domain 2-like 11
GIY-YIG endonuclease RuvA domain 2-like 11
Cobalamin (vitamin B12)-binding domain Methionine synthase activation domain-like 11
HD-domain/PDEase-like HD-domain/PDEase-like 11
Carbamoyl phosphate synthetase, large subunit connection domain Methylglyoxal synthase-like 11
Probable ACP-binding domain of malonyl-CoA ACP transacylase ACP-like 11
Ribosomal protein S5 domain 2-like Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 11
Ribosomal L11/L12e N-terminal domain Ribosomal protein L11, C-terminal domain 11
Actin-like ATPase domain Heat shock protein 70kD (HSP70), C-terminal subdomain 11
YebC-like PFL-like glycyl radical enzymes 11
R1 subunit of ribonucleotide reductase, N-terminal domain PFL-like glycyl radical enzymes 11
MgtE N-terminal domain-like MgtE membrane domain-like 11
GIY-YIG endonuclease C-terminal UvrC-binding domain of UvrB 11
Probable ACP-binding domain of malonyl-CoA ACP transacylase alpha/beta-Hydrolases 11
Ribonuclease H-like HRDC-like 11
Ada DNA repair protein, N-terminal domain (N-Ada 10) Methylated DNA-protein cysteine methyltransferase, C-terminal domain 11
HSP40/DnaJ peptide-binding domain HSP40/DnaJ peptide-binding domain 11
Acetyl-CoA synthetase-like ACP-like 11
TPR-like C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase 11
WD40 repeat-like Cytochrome c 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheW-like 11
Methylesterase CheB, C-terminal domain Homodimeric domain of signal transducing histidine kinase 11
ThrRS/AlaRS common domain Class II aaRS ABD-related 11
Hsp33 domain HSP33 redox switch-like 11
TGS-like Class II aaRS and biotin synthetases 11
OmpA-like Caspase-like 11
Nitrite/Sulfite reductase N-terminal domain-like Nitrite/Sulfite reductase N-terminal domain-like 11
Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 11
N-utilization substance G protein NusG, N-terminal domain Translation proteins SH3-like domain 11
Formyltransferase Bacterial luciferase-like 11
N-terminal domain of bifunctional PutA protein ALDH-like 11
VHL Hedgehog/intein (Hint) domain 11
Periplasmic binding protein-like II Voltage-gated potassium channels 11
Fe,Mn superoxide dismutase (SOD), N-terminal domain Fe,Mn superoxide dismutase (SOD), C-terminal domain 11
Rho N-terminal domain-like Nucleic acid-binding proteins 11
Rudiment single hybrid motif post-HMGL domain-like 11
FMN-linked oxidoreductases Alpha subunit of glutamate synthase, C-terminal domain 11
Nucleotidyltransferase substrate binding subunit/domain Nucleotidyltransferase substrate binding subunit/domain 11
GAF domain-like Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain 11
Class II aaRS and biotin synthetases Anticodon-binding domain of PheRS 11
GAF domain-like CheY-like 11
MFS general substrate transporter MFS general substrate transporter 11
Homodimeric domain of signal transducing histidine kinase CheW-like 11
4Fe-4S ferredoxins Ferredoxin reductase-like, C-terminal NADP-linked domain 11
PEP carboxykinase N-terminal domain PEP carboxykinase-like 11
PreATP-grasp domain PreATP-grasp domain 11
Zinc beta-ribbon Prokaryotic SH3-related domain 11
Fumarylacetoacetate hydrolase, FAH, N-terminal domain FAH 11
Tex N-terminal region-like RuvA domain 2-like 11
alpha-helical ferredoxin ADC-like 11
TGS-like Class II aaRS ABD-related 11
HAMP domain-like EAL domain-like 11
beta-Roll VHL 11
PheT/TilS domain Putative DNA-binding domain 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain III 11
Pre-protein crosslinking domain of SecA Helical scaffold and wing domains of SecA 11
Phosphoenolpyruvate/pyruvate domain PK C-terminal domain-like 11
Thioredoxin-like TPR-like 11
Rhodanese/Cell cycle control phosphatase Phosphohistidine domain 11
P-loop containing nucleoside triphosphate hydrolases TGS-like 11
Adenine nucleotide alpha hydrolases-like Adenine nucleotide alpha hydrolases-like 11
PreATP-grasp domain Methylglyoxal synthase-like 11
PreATP-grasp domain post-HMGL domain-like 11
PreATP-grasp domain Aldolase 11
cAMP-binding domain-like CBS-domain pair 11
post-HMGL domain-like Single hybrid motif 11
Fumarate reductase respiratory complex transmembrane subunits 2Fe-2S ferredoxin-like 11
C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase Quinoprotein alcohol dehydrogenase-like 11
Single hybrid motif TK C-terminal domain-like 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases tRNA-binding arm 11
Sigma3 and sigma4 domains of RNA polymerase sigma factors CheY-like 11
Ribonuclease PH domain 2-like Nucleic acid-binding proteins 11
Ribosomal protein L6 Ribosomal protein L6 11
DnaK suppressor protein DksA, alpha-hairpin domain Glucocorticoid receptor-like (DNA-binding domain) 11
Glutathione synthetase ATP-binding domain-like Carbamoyl phosphate synthetase, large subunit connection domain 11
NAD(P)-binding Rossmann-fold domains Serine metabolism enzymes domain 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
PurM C-terminal domain-like PurM C-terminal domain-like 11
Thiolase-like ACP-like 11
YrdC/RibB RibA-like 11
PGBD-like L,D-transpeptidase catalytic domain-like 11
Nucleotide-binding domain FAD/NAD(P)-binding domain 11
GroEL-intermediate domain like GroEL apical domain-like 11
Ribosomal protein S5 domain 2-like GHMP Kinase, C-terminal domain 11
Coiled-coil domain of nucleotide exchange factor GrpE Head domain of nucleotide exchange factor GrpE 11
OmpA-like Quinoprotein alcohol dehydrogenase-like 11
TGS-like ACT-like 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Nucleotidylyl transferase 11
TPR-like UDP-Glycosyltransferase/glycogen phosphorylase 11
FAD-linked oxidoreductase ALDH-like 11
PYP-like sensor domain (PAS domain) EAL domain-like 11
Sigma3 and sigma4 domains of RNA polymerase sigma factors NTF2-like 11
Tetrapyrrole methylase S-adenosyl-L-methionine-dependent methyltransferases 11
P-loop containing nucleoside triphosphate hydrolases CarD-like 11
"Winged helix" DNA-binding domain HRDC-like 11
Homeodomain-like Probable bacterial effector-binding domain 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) Translation proteins 11
RuvA domain 2-like JAB1/MPN domain 11
Glutathione synthetase ATP-binding domain-like post-HMGL domain-like 11
N-terminal domain of MutM-like DNA repair proteins S13-like H2TH domain 11
Homo-oligomeric flavin-containing Cys decarboxylases, HFCD CoaB-like 11
Leukotriene A4 hydrolase N-terminal domain Metalloproteases ("zincins"), catalytic domain 11
GAF domain-like Phosphohistidine domain 11
Actin-like ATPase domain Heat shock protein 70kD (HSP70), peptide-binding domain 11
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 Nucleic acid-binding proteins 11
Dihydropteroate synthetase-like Methionine synthase domain 11
Acetyl-CoA synthetase-like Bacterial luciferase-like 11
GAF domain-like Homeodomain-like 11
Glutathione synthetase ATP-binding domain-like Phosphoenolpyruvate/pyruvate domain 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase DNA mismatch repair protein MutL 11
FAD/NAD(P)-binding domain 4Fe-4S ferredoxins 11
Galactose mutarotase-like E set domains 11
Sigma3 and sigma4 domains of RNA polymerase sigma factors NagB/RpiA/CoA transferase-like 11
C-terminal UvrC-binding domain of UvrB RuvA domain 2-like 11
Thiolase-like FabD/lysophospholipase-like 11
HD-domain/PDEase-like Nucleotidyltransferase 11
Galactose mutarotase-like (Trans)glycosidases 11
Nucleic acid-binding proteins Putative DNA-binding domain 11
Nucleic acid-binding proteins GAD domain-like 11
Eukaryotic type KH-domain (KH-domain type I) Nucleic acid-binding proteins 11
PUA domain-like S-adenosyl-L-methionine-dependent methyltransferases 11
Thiamin pyrophosphokinase, catalytic domain Thiamin pyrophosphokinase, substrate-binding domain 11
Nucleotidylyl transferase Riboflavin kinase-like 11
Translation proteins ThrRS/AlaRS common domain 11
Acetyl-CoA synthetase-like Acetyl-CoA synthetase-like 11
Zinc beta-ribbon DNA primase core 11
Prokaryotic type KH domain (KH-domain type II) Rad51 N-terminal domain-like 11
L9 N-domain-like Ribosomal protein L9 C-domain 11
Cupredoxins Cupredoxins 11
Elongation factor Ts (EF-Ts), dimerisation domain Elongation factor Ts (EF-Ts), dimerisation domain 11
Tryptophan synthase beta subunit-like PLP-dependent enzymes ACT-like 11
Formate/glycerate dehydrogenase catalytic domain-like Serine metabolism enzymes domain 11
DNA ligase/mRNA capping enzyme, catalytic domain RuvA domain 2-like 11
Periplasmic binding protein-like II ACT-like 11
UDP-Glycosyltransferase/glycogen phosphorylase S-adenosyl-L-methionine-dependent methyltransferases 11
2Fe-2S ferredoxin-like Nucleotide cyclase 11
Ribonuclease H-like Nucleic acid-binding proteins 11
Quinoprotein alcohol dehydrogenase-like Caspase-like 11
PYP-like sensor domain (PAS domain) Histidine-containing phosphotransfer domain, HPT domain 11
Nucleic acid-binding proteins ArfGap/RecO-like zinc finger 11
Adenine nucleotide alpha hydrolases-like DHS-like NAD/FAD-binding domain 11
Folate-binding domain P-loop containing nucleoside triphosphate hydrolases 11
P-loop containing nucleoside triphosphate hydrolases TrpR-like 11
PreATP-grasp domain Carbamoyl phosphate synthetase, large subunit connection domain 11
Glycoside hydrolase/deacetylase Nucleotide-diphospho-sugar transferases 11
Rho N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 11
P-loop containing nucleoside triphosphate hydrolases Prokaryotic type KH domain (KH-domain type II) 11
Transmembrane di-heme cytochromes YceI-like 11
PIN domain-like 5' to 3' exonuclease, C-terminal subdomain 11
Sigma2 domain of RNA polymerase sigma factors NTF2-like 11
CBS-domain pair MgtE membrane domain-like 11
Dihydropteroate synthetase-like Nitrite and sulphite reductase 4Fe-4S domain-like 11
Ribonuclease PH domain 2-like Ribonuclease PH domain 2-like 11
Rudiment single hybrid motif Aldolase 11
Tubulin nucleotide-binding domain-like Tubulin C-terminal domain-like 11
Aconitase B, N-terminal domain LeuD/IlvD-like 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain II 11
N-terminal domain of bifunctional PutA protein FAD-linked oxidoreductase 11
Succinyl-CoA synthetase domains Succinyl-CoA synthetase domains 11
Nucleotidylyl transferase P-loop containing nucleoside triphosphate hydrolases 11
PUA domain-like Nucleotidylyl transferase 11
Rhodanese/Cell cycle control phosphatase Glutathione synthetase ATP-binding domain-like 11
RuvA domain 2-like DNA helicase RuvA subunit, C-terminal domain 11
S-adenosyl-L-methionine-dependent methyltransferases Homodimeric domain of signal transducing histidine kinase 11
Folate-binding domain TrmE connector domain 11
Galactose-binding domain-like (Trans)glycosidases 11
NAD(P)-binding Rossmann-fold domains 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
Dihydropteroate synthetase-like Methionine synthase activation domain-like 11
Acid proteases Glutathione synthetase ATP-binding domain-like 11
P-loop containing nucleoside triphosphate hydrolases Pre-protein crosslinking domain of SecA 11
Metallo-dependent hydrolases Metallo-dependent hydrolases 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
beta-lactamase/transpeptidase-like Penicillin-binding protein associated domain 11
Nucleotide-diphospho-sugar transferases Trimeric LpxA-like enzymes 11
Insert subdomain of RNA polymerase alpha subunit C-terminal domain of RNA polymerase alpha subunit 11
ValRS/IleRS/LeuRS editing domain tRNA-binding arm 11
PGBD-like Trypsin-like serine proteases 11

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