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Domain combination pairs in Alteromonas sp. SN2

All pairs of domain combinations at the superfamily level are listed here.
The identification of domain pairs does not account for the possibility of non-contiguous domains. Inserted, or interlaced, domains are seen as having a simple pair ordering.

  • For a list of unique full length architectures for this genome click here (can be slow).
Adjacent domain pairs graph

Graph of adjacent domain pairs.


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Domain combination pairs

749 domain combination pairs.
Click on a column heading to sort that column, or the 'View' button to see domain architetures for that domain pair combination.

Superfamily (N) Superfamily (C) Number of occurrances Number unique
Homodimeric domain of signal transducing histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 5228
"Winged helix" DNA-binding domain Periplasmic binding protein-like II 371
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheY-like 2521
Nucleotide cyclase EAL domain-like 2512
Homodimeric domain of signal transducing histidine kinase CheY-like 2420
Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain 249
P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases 2114
CheY-like C-terminal effector domain of the bipartite response regulators 212
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 208
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB transmembrane domain 208
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB transmembrane domain 208
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 186
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 187
PYP-like sensor domain (PAS domain) Nucleotide cyclase 1810
Sigma2 domain of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 174
Thioredoxin-like GST C-terminal domain-like 152
NAD(P)-binding Rossmann-fold domains 6-phosphogluconate dehydrogenase C-terminal domain-like 146
Actin-like ATPase domain Actin-like ATPase domain 145
NAD(P)-binding Rossmann-fold domains Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 135
PYP-like sensor domain (PAS domain) PYP-like sensor domain (PAS domain) 1310
PYP-like sensor domain (PAS domain) Homodimeric domain of signal transducing histidine kinase 129
PYP-like sensor domain (PAS domain) EAL domain-like 127
TPR-like TPR-like 128
PYP-like sensor domain (PAS domain) ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 129
GroES-like NAD(P)-binding Rossmann-fold domains 112
P-loop containing nucleoside triphosphate hydrolases Homeodomain-like 114
Homeodomain-like Tetracyclin repressor-like, C-terminal domain 111
CheY-like PYP-like sensor domain (PAS domain) 108
Acyl-CoA dehydrogenase NM domain-like Acyl-CoA dehydrogenase C-terminal domain-like 103
lambda repressor-like DNA-binding domains Periplasmic binding protein-like I 101
CheY-like Homeodomain-like 92
ABC transporter transmembrane region P-loop containing nucleoside triphosphate hydrolases 92
P-loop containing nucleoside triphosphate hydrolases Translation proteins 96
ACT-like ACT-like 95
(Trans)glycosidases Glycosyl hydrolase domain 86
CheY-like P-loop containing nucleoside triphosphate hydrolases 81
Zn-dependent exopeptidases Bacterial exopeptidase dimerisation domain 82
Multidrug resistance efflux transporter EmrE Multidrug resistance efflux transporter EmrE 82
Composite domain of metallo-dependent hydrolases Metallo-dependent hydrolases 85
PreATP-grasp domain Glutathione synthetase ATP-binding domain-like 85
Homodimeric domain of signal transducing histidine kinase Histidine-containing phosphotransfer domain, HPT domain 75
Formate/glycerate dehydrogenase catalytic domain-like NAD(P)-binding Rossmann-fold domains 73
Sm-like ribonucleoproteins Mechanosensitive channel protein MscS (YggB), C-terminal domain 73
CheY-like CheY-like 75
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Histidine-containing phosphotransfer domain, HPT domain 75
MurD-like peptide ligases, catalytic domain MurD-like peptide ligases, peptide-binding domain 63
"Winged helix" DNA-binding domain GntR ligand-binding domain-like 61
Thiolase-like Thiolase-like 61
P-loop containing nucleoside triphosphate hydrolases EF-G C-terminal domain-like 64
Nucleotidylyl transferase Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 66
Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) 64
TPR-like CheY-like 65
CheY-like Nucleotide cyclase 65
Aminoacid dehydrogenase-like, N-terminal domain NAD(P)-binding Rossmann-fold domains 63
DPP6 N-terminal domain-like alpha/beta-Hydrolases 52
FAD/NAD(P)-binding domain FAD-linked reductases, C-terminal domain 52
Riboflavin synthase domain-like Ferredoxin reductase-like, C-terminal NADP-linked domain 54
E set domains Glycosyl hydrolase domain 53
CheY-like Histidine-containing phosphotransfer domain, HPT domain 54
TPR-like Nucleotide cyclase 53
Mechanosensitive channel protein MscS (YggB), transmembrane region Sm-like ribonucleoproteins 52
HAMP domain-like Homodimeric domain of signal transducing histidine kinase 53
Homeodomain-like Homeodomain-like 54
E set domains (Trans)glycosidases 53
PLP-binding barrel Alanine racemase C-terminal domain-like 53
P-loop containing nucleoside triphosphate hydrolases Ribosomal protein S5 domain 2-like 54
Mechanosensitive channel protein MscS (YggB), transmembrane region Mechanosensitive channel protein MscS (YggB), C-terminal domain 52
Translation proteins EF-G C-terminal domain-like 53
HAMP domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 53
Cytochrome c Cytochrome c 43
Nucleic acid-binding proteins Class II aaRS and biotin synthetases 43
Alpha-L RNA-binding motif Pseudouridine synthase 41
EF-G C-terminal domain-like EF-G C-terminal domain-like 42
PYP-like sensor domain (PAS domain) Methyl-accepting chemotaxis protein (MCP) signaling domain 43
N-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase 41
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Ribosomal protein S5 domain 2-like 44
Carboxypeptidase regulatory domain-like Porins 42
6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 42
Nucleic acid-binding proteins RuvA domain 2-like 44
P-loop containing nucleoside triphosphate hydrolases TPR-like 42
LeuD/IlvD-like Aconitase iron-sulfur domain 42
N-terminal domain of alpha and beta subunits of F1 ATP synthase P-loop containing nucleoside triphosphate hydrolases 41
FAD/NAD(P)-binding domain FAD/NAD-linked reductases, dimerisation (C-terminal) domain 42
PreATP-grasp domain Rudiment single hybrid motif 42
Thiamin diphosphate-binding fold (THDP-binding) TK C-terminal domain-like 43
Nucleic acid-binding proteins Nucleic acid-binding proteins 43
Glutathione synthetase ATP-binding domain-like Rudiment single hybrid motif 42
Leukotriene A4 hydrolase N-terminal domain Metalloproteases ("zincins"), catalytic domain 43
CheY-like HD-domain/PDEase-like 43
P-loop containing nucleoside triphosphate hydrolases C-terminal domain of alpha and beta subunits of F1 ATP synthase 41
Creatinase/prolidase N-terminal domain Creatinase/aminopeptidase 31
Phosphoglucomutase, first 3 domains Phosphoglucomutase, first 3 domains 32
ValRS/IleRS/LeuRS editing domain Nucleotidylyl transferase 33
ClpP/crotonase 6-phosphogluconate dehydrogenase C-terminal domain-like 31
Enolase N-terminal domain-like Enolase C-terminal domain-like 31
PurM N-terminal domain-like PurM C-terminal domain-like 32
PYP-like sensor domain (PAS domain) GAF domain-like 33
MetI-like MetI-like 32
Nucleic acid-binding proteins Translation proteins SH3-like domain 32
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex CoA-dependent acyltransferases 33
Nucleotidyltransferase ACT-like 32
2Fe-2S ferredoxin-like CO dehydrogenase ISP C-domain like 32
C-terminal effector domain of the bipartite response regulators TPR-like 32
EspE N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 33
HlyD-like secretion proteins HlyD-like secretion proteins 32
Calcium-dependent phosphotriesterase Calcium-dependent phosphotriesterase 33
ClpP/crotonase NAD(P)-binding Rossmann-fold domains 31
Single hybrid motif Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 33
GAF domain-like Homodimeric domain of signal transducing histidine kinase 33
Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 32
MurCD N-terminal domain MurD-like peptide ligases, peptide-binding domain 31
Calcium-dependent phosphotriesterase Nucleotide cyclase 33
Translation proteins EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 32
Phosphoglucomutase, first 3 domains Phosphoglucomutase, C-terminal domain 32
Nucleotidyltransferase HD-domain/PDEase-like 32
Cytochrome c oxidase subunit II-like, transmembrane region Cupredoxins 32
Single hybrid motif CoA-dependent acyltransferases 33
Class II aaRS and biotin synthetases Class II aaRS ABD-related 33
P-loop containing nucleoside triphosphate hydrolases MOP-like 31
GAF domain-like Nucleotide cyclase 33
"Winged helix" DNA-binding domain Dimeric alpha+beta barrel 31
Triger factor/SurA peptide-binding domain-like FKBP-like 33
Ribosomal protein S5 domain 2-like GHMP Kinase, C-terminal domain 31
P-loop containing nucleoside triphosphate hydrolases post-AAA+ oligomerization domain-like 32
P-loop containing nucleoside triphosphate hydrolases EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 32
GAF domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 33
P-loop containing nucleoside triphosphate hydrolases "Winged helix" DNA-binding domain 33
MurCD N-terminal domain MurD-like peptide ligases, catalytic domain 31
Nucleotide-diphospho-sugar transferases Trimeric LpxA-like enzymes 31
HD-domain/PDEase-like ACT-like 32
Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like 33
ValRS/IleRS/LeuRS editing domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 33
DNA ligase/mRNA capping enzyme, catalytic domain Nucleic acid-binding proteins 33
Ribosomal protein S5 domain 2-like EF-G C-terminal domain-like 32
Penicillin binding protein dimerisation domain beta-lactamase/transpeptidase-like 21
CheY-like CheC-like 21
PYP-like sensor domain (PAS domain) Homeodomain-like 22
Calcium-dependent phosphotriesterase PYP-like sensor domain (PAS domain) 22
Invasin/intimin cell-adhesion fragments Invasin/intimin cell-adhesion fragments 22
MgtE N-terminal domain-like MgtE membrane domain-like 21
TrkA C-terminal domain-like TrkA C-terminal domain-like 22
HMA, heavy metal-associated domain Calcium ATPase, transmembrane domain M 22
NAD(P)-binding Rossmann-fold domains ACT-like 22
Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 22
CheY-like EAL domain-like 22
Carbamate kinase-like PUA domain-like 21
ClpP/crotonase ClpP/crotonase 22
ISP domain Bet v1-like 22
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Type II DNA topoisomerase 22
FAD-linked oxidases, C-terminal domain alpha-helical ferredoxin 22
Chemotaxis receptor methyltransferase CheR, N-terminal domain S-adenosyl-L-methionine-dependent methyltransferases 22
HCP-like TPR-like 22
Homodimeric domain of signal transducing histidine kinase CheW-like 21
GAF domain-like CheY-like 22
CBS-domain pair MgtE membrane domain-like 21
Calcium ATPase, transduction domain A Calcium ATPase, transmembrane domain M 22
GAF domain-like EAL domain-like 22
2Fe-2S ferredoxin-like Riboflavin synthase domain-like 22
Cryptochrome/photolyase, N-terminal domain Cryptochrome/photolyase FAD-binding domain 21
Zinc beta-ribbon Zinc beta-ribbon 22
P-loop containing nucleoside triphosphate hydrolases Restriction endonuclease-like 22
Chaperone J-domain HSP40/DnaJ peptide-binding domain 22
PYP-like sensor domain (PAS domain) Histidine-containing phosphotransfer domain, HPT domain 22
Double Clp-N motif P-loop containing nucleoside triphosphate hydrolases 22
Aconitase B, N-terminal domain Aconitase iron-sulfur domain 21
Class II aaRS and biotin synthetases ThrRS/AlaRS common domain 22
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheW-like 21
Adenine nucleotide alpha hydrolases-like Adenine nucleotide alpha hydrolases-like 21
HAMP domain-like CheY-like 22
FMN-linked oxidoreductases Nucleotide-binding domain 21
Calcium ATPase, transduction domain A HAD-like 22
FMN-linked oxidoreductases FAD/NAD(P)-binding domain 21
Homeodomain-like SIS domain 21
Nucleic acid-binding proteins P-loop containing nucleoside triphosphate hydrolases 22
tRNA-binding arm Class II aaRS and biotin synthetases 21
Nucleotide-diphospho-sugar transferases RmlC-like cupins 21
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 21
Nucleotidyltransferase Poly A polymerase C-terminal region-like 22
TGS-like ACT-like 21
DNA methylase specificity domain DNA methylase specificity domain 22
Phosphohistidine domain Phosphoenolpyruvate/pyruvate domain 22
HSP40/DnaJ peptide-binding domain HSP40/DnaJ peptide-binding domain 22
Aconitase B, N-terminal domain LeuD/IlvD-like 21
Calcium-dependent phosphotriesterase EAL domain-like 22
"Winged helix" DNA-binding domain NagB/RpiA/CoA transferase-like 21
IlvD/EDD N-terminal domain-like LeuD/IlvD-like 21
Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases 22
Starch-binding domain-like Porins 21
Nucleotidyltransferase TGS-like 21
GAF domain-like GAF domain-like 22
Translation proteins Ribosomal protein S5 domain 2-like 21
Rhodanese/Cell cycle control phosphatase Rhodanese/Cell cycle control phosphatase 22
Glucocorticoid receptor-like (DNA-binding domain) P-loop containing nucleoside triphosphate hydrolases 22
EAL domain-like HD-domain/PDEase-like 21
HMA, heavy metal-associated domain HAD-like 22
CheY-like Methylesterase CheB, C-terminal domain 21
PDZ domain-like PDZ domain-like 22
Histidine-containing phosphotransfer domain, HPT domain CheW-like 21
Trypsin-like serine proteases PDZ domain-like 22
Sensory domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 22
Folate-binding domain Aminomethyltransferase beta-barrel domain 21
Zn-dependent exopeptidases Fibronectin type III 22
Nucleic acid-binding proteins BRCT domain 22
HMA, heavy metal-associated domain Calcium ATPase, transduction domain A 22
Ribonuclease H-like DNA/RNA polymerases 22
Ribosomal protein S5 domain 2-like Type II DNA topoisomerase 22
Actin-like ATPase domain HD-domain/PDEase-like 21
Heme-dependent peroxidases Heme-dependent peroxidases 21
C-terminal effector domain of the bipartite response regulators P-loop containing nucleoside triphosphate hydrolases 21
Type II DNA topoisomerase GyrA/ParC C-terminal domain-like 22
Cation efflux protein transmembrane domain-like Cation efflux protein cytoplasmic domain-like 21
Sialidases Oligoxyloglucan reducing end-specific cellobiohydrolase 22
Ribosomal protein S5 domain 2-like Ribonuclease PH domain 2-like 22
Phospholipase D/nuclease Phospholipase D/nuclease 22
Thiamin diphosphate-binding fold (THDP-binding) DHS-like NAD/FAD-binding domain 21
Sensory domain-like CheY-like 22
Sensory domain-like Methyl-accepting chemotaxis protein (MCP) signaling domain 21
2Fe-2S ferredoxin-like Ferredoxin reductase-like, C-terminal NADP-linked domain 22
HD-domain/PDEase-like TGS-like 21
Thioesterase/thiol ester dehydrase-isomerase Thioesterase/thiol ester dehydrase-isomerase 21
TSP type-3 repeat Integrin alpha N-terminal domain 22
Sensory domain-like Homodimeric domain of signal transducing histidine kinase 22
Cytochrome c oxidase subunit II-like, transmembrane region Cytochrome c 21
FAD-binding/transporter-associated domain-like CO dehydrogenase flavoprotein C-terminal domain-like 22
Concanavalin A-like lectins/glucanases Galactose-binding domain-like 22
Periplasmic binding protein-like II ACT-like 22
Nucleotidyltransferase Nucleotidyltransferase substrate binding subunit/domain 22
LuxS/MPP-like metallohydrolase LuxS/MPP-like metallohydrolase 21
Metalloproteases ("zincins"), catalytic domain ARM repeat 21
S-adenosyl-L-methionine-dependent methyltransferases S-adenosyl-L-methionine-dependent methyltransferases 22
Leukotriene A4 hydrolase N-terminal domain ARM repeat 21
Nitrite/Sulfite reductase N-terminal domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 22
FAD-binding/transporter-associated domain-like FAD-linked oxidases, C-terminal domain 22
MurE/MurF N-terminal domain MurD-like peptide ligases, peptide-binding domain 21
HAD-like Calcium ATPase, transmembrane domain M 22
MgtE N-terminal domain-like CBS-domain pair 21
Single hybrid motif Single hybrid motif 22
PYP-like sensor domain (PAS domain) P-loop containing nucleoside triphosphate hydrolases 22
Carbamate kinase-like ACT-like 22
FAD-binding/transporter-associated domain-like alpha-helical ferredoxin 22
Zn-dependent exopeptidases Class I glutamine amidotransferase-like 22
E set domains E set domains 22
"Winged helix" DNA-binding domain "Winged helix" DNA-binding domain 21
TPR-like Homodimeric domain of signal transducing histidine kinase 22
Galactose-binding domain-like Galactose-binding domain-like 22
L30e-like alpha/beta knot 21
TPR-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 22
cAMP-binding domain-like "Winged helix" DNA-binding domain 21
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 22
GreA transcript cleavage protein, N-terminal domain FKBP-like 21
Formate dehydrogenase/DMSO reductase, domains 1-3 ADC-like 22
Class I glutamine amidotransferase-like Homeodomain-like 21
MurE/MurF N-terminal domain MurD-like peptide ligases, catalytic domain 21
NAD(P)-binding Rossmann-fold domains TrkA C-terminal domain-like 22
TerB-like Chaperone J-domain 22
Cupredoxins Cytochrome c 21
CBS-domain pair FAD-binding/transporter-associated domain-like 21
PA domain Zn-dependent exopeptidases 21
RuvA domain 2-like BRCT domain 22
Nucleotide-binding domain FAD/NAD(P)-binding domain 21
CheW-like CheY-like 21
Galactose mutarotase-like (Trans)glycosidases 22
Tubulin nucleotide-binding domain-like Tubulin C-terminal domain-like 22
Pectin lyase-like Pectin lyase-like 22
CO dehydrogenase molybdoprotein N-domain-like Molybdenum cofactor-binding domain 21
Lysozyme-like beta-lactamase/transpeptidase-like 22
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 22
PurM N-terminal domain-like Class I glutamine amidotransferase-like 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain II 11
Pectin lyase-like TSP type-3 repeat 11
Eukaryotic type KH-domain (KH-domain type I) P-loop containing nucleoside triphosphate hydrolases 11
Lysozyme-like LysM domain 11
Restriction endonuclease-like Zinc beta-ribbon 11
DNA ligase/mRNA capping enzyme, catalytic domain RuvA domain 2-like 11
lambda repressor-like DNA-binding domains RmlC-like cupins 11
Ribosomal protein S5 domain 2-like Nucleic acid-binding proteins 11
Pili subunits GspK insert domain-like 11
TPR-like LysM domain 11
CarD-like TRCF domain-like 11
Starch-binding domain-like E set domains 11
Tex N-terminal region-like Nucleic acid-binding proteins 11
N-terminal domain of MutM-like DNA repair proteins S13-like H2TH domain 11
Thiol:disulfide interchange protein DsbD, N-terminal domain (DsbD-alpha) Thioredoxin-like 11
GspK insert domain-like GspK insert domain-like 11
HAMP domain-like EAL domain-like 11
PurS-like FGAM synthase PurL, linker domain 11
Nucleotidylyl transferase An anticodon-binding domain of class I aminoacyl-tRNA synthetases 11
"Winged helix" DNA-binding domain HRDC-like 11
YajQ-like YajQ-like 11
Radical SAM enzymes RuvA domain 2-like 11
PurM N-terminal domain-like PurM N-terminal domain-like 11
RmlC-like cupins Homeodomain-like 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase DNA mismatch repair protein MutL 11
PEP carboxykinase N-terminal domain PEP carboxykinase-like 11
Tricorn protease N-terminal domain alpha/beta-Hydrolases 11
Glutamyl tRNA-reductase catalytic, N-terminal domain NAD(P)-binding Rossmann-fold domains 11
PUA domain-like alpha/beta knot 11
P-loop containing nucleoside triphosphate hydrolases RecA protein, C-terminal domain 11
Periplasmic binding protein-like II Nucleotide cyclase 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) Translation proteins 11
Kelch motif Integrin alpha N-terminal domain 11
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 Eukaryotic type KH-domain (KH-domain type I) 11
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 Nucleic acid-binding proteins 11
Nucleotidyltransferase substrate binding subunit/domain Nucleotidyltransferase substrate binding subunit/domain 11
CBD9-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Tryptophan synthase beta subunit-like PLP-dependent enzymes ACT-like 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) FMN-linked oxidoreductases 11
N-utilization substance G protein NusG, N-terminal domain Translation proteins SH3-like domain 11
PurS-like Class I glutamine amidotransferase-like 11
Homodimeric domain of signal transducing histidine kinase Homeodomain-like 11
PUA domain-like P-loop containing nucleoside triphosphate hydrolases 11
Glutathione synthetase ATP-binding domain-like Methylglyoxal synthase-like 11
Methylated DNA-protein cysteine methyltransferase domain Methylated DNA-protein cysteine methyltransferase, C-terminal domain 11
Domain of the SRP/SRP receptor G-proteins P-loop containing nucleoside triphosphate hydrolases 11
Galactose-binding domain-like (Trans)glycosidases 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) ThrRS/AlaRS common domain 11
NagB/RpiA/CoA transferase-like NagB/RpiA/CoA transferase-like 11
Diaminopimelate epimerase-like Diaminopimelate epimerase-like 11
HRDC-like HRDC-like 11
Thermostable phytase (3-phytase) Thermostable phytase (3-phytase) 11
GIY-YIG endonuclease RuvA domain 2-like 11
Insert subdomain of RNA polymerase alpha subunit C-terminal domain of RNA polymerase alpha subunit 11
R1 subunit of ribonucleotide reductase, N-terminal domain PFL-like glycyl radical enzymes 11
beta-Galactosidase/glucuronidase domain Galactose mutarotase-like 11
S-adenosyl-L-methionine-dependent methyltransferases Putative methyltransferase TM0872, insert domain 11
2Fe-2S ferredoxin-like alpha-helical ferredoxin 11
Prokaryotic type I DNA topoisomerase Zinc beta-ribbon 11
Heme-dependent catalase-like Class I glutamine amidotransferase-like 11
YjeF N-terminal domain-like Ribokinase-like 11
L9 N-domain-like Ribosomal protein L9 C-domain 11
HesB-like domain Fe-S cluster assembly (FSCA) domain-like 11
PH0987 N-terminal domain-like Cyclophilin-like 11
Ribonuclease PH domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
Ribbon-helix-helix Replication modulator SeqA, C-terminal DNA-binding domain 11
GroEL equatorial domain-like GroEL apical domain-like 11
Homo-oligomeric flavin-containing Cys decarboxylases, HFCD CoaB-like 11
Pectin lyase-like Integrin alpha N-terminal domain 11
Quinoprotein alcohol dehydrogenase-like Homodimeric domain of signal transducing histidine kinase 11
FGAM synthase PurL, linker domain PurM N-terminal domain-like 11
Translation initiation factor IF3, N-terminal domain Translation initiation factor IF3, C-terminal domain 11
HisI-like all-alpha NTP pyrophosphatases 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Homeodomain-like 11
Glutathione synthetase ATP-binding domain-like Succinyl-CoA synthetase domains 11
Zinc beta-ribbon DNA primase DnaG, C-terminal domain 11
RuvA domain 2-like JAB1/MPN domain 11
HAMP domain-like Nucleotide cyclase 11
Nucleic acid-binding proteins ArfGap/RecO-like zinc finger 11
Nucleotidylyl transferase Nucleic acid-binding proteins 11
Quinoprotein alcohol dehydrogenase-like Homeodomain-like 11
PurS-like PurM C-terminal domain-like 11
Galactose-binding domain-like Galactose mutarotase-like 11
P-loop containing nucleoside triphosphate hydrolases TGS-like 11
Nucleotide-diphospho-sugar transferases Protein kinase-like (PK-like) 11
NAD(P)-binding Rossmann-fold domains LDH C-terminal domain-like 11
NagB/RpiA/CoA transferase-like Acyl-CoA N-acyltransferases (Nat) 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Nucleotidylyl transferase 11
P-loop containing nucleoside triphosphate hydrolases HRDC-like 11
NAD-binding domain of HMG-CoA reductase Substrate-binding domain of HMG-CoA reductase 11
Class II aaRS and biotin synthetases Translation proteins 11
Resolvase-like Homeodomain-like 11
SMAD/FHA domain P-loop containing nucleoside triphosphate hydrolases 11
YbaK/ProRS associated domain Class II aaRS ABD-related 11
Putative DNA-binding domain Translation proteins 11
P-loop containing nucleoside triphosphate hydrolases Signal peptide-binding domain 11
Quinoprotein alcohol dehydrogenase-like CheY-like 11
Class II aaRS and biotin synthetases C-terminal domain of transcriptional repressors 11
PPK N-terminal domain-like PHP14-like 11
Periplasmic binding protein-like II GlnB-like 11
PRC-barrel domain PRC-barrel domain 11
DPP6 N-terminal domain-like Composite domain of metallo-dependent hydrolases 11
CBD9-like Homodimeric domain of signal transducing histidine kinase 11
Ribonuclease PH domain 2-like Nucleic acid-binding proteins 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Nucleotidylyl transferase 11
PIN domain-like 5' to 3' exonuclease, C-terminal subdomain 11
Nicotinate/Quinolinate PRTase N-terminal domain-like Nicotinate/Quinolinate PRTase C-terminal domain-like 11
PP2C-like Protein kinase-like (PK-like) 11
Chorismate mutase II Periplasmic binding protein-like II 11
DsbC/DsbG N-terminal domain-like Thioredoxin-like 11
TolB, N-terminal domain Tricorn protease N-terminal domain 11
Sensory domain-like PYP-like sensor domain (PAS domain) 11
P-loop containing nucleoside triphosphate hydrolases Isocitrate/Isopropylmalate dehydrogenase-like 11
vWA-like TPR-like 11
Translation proteins Translation proteins 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Alpha subunit of glutamate synthase, C-terminal domain 11
HIT-like HIT-like 11
Lysozyme-like PGBD-like 11
Nucleotidyltransferase substrate binding subunit/domain ACT-like 11
beta-lactamase/transpeptidase-like Penicillin-binding protein associated domain 11
Rad51 N-terminal domain-like Rad51 N-terminal domain-like 11
Zn-dependent exopeptidases LysM domain 11
PP2C-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Glutathione synthetase ATP-binding domain-like Phosphoenolpyruvate/pyruvate domain 11
P-loop containing nucleoside triphosphate hydrolases Class I glutamine amidotransferase-like 11
Methionine synthase domain Methionine synthase activation domain-like 11
"Winged helix" DNA-binding domain LexA/Signal peptidase 11
TGS-like ThrRS/AlaRS common domain 11
Homeodomain-like TATA-box binding protein-like 11
P-loop containing nucleoside triphosphate hydrolases Initiation factor IF2/eIF5b, domain 3 11
GroEL-intermediate domain like GroEL apical domain-like 11
Glycerol-3-phosphate (1)-acyltransferase Acyl-CoA N-acyltransferases (Nat) 11
HD-domain/PDEase-like Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
FKBP-like FKBP-like 11
GAF domain-like Phosphohistidine domain 11
Galactose mutarotase-like Glycosyl hydrolase domain 11
Galactose-binding domain-like beta-Galactosidase/glucuronidase domain 11
2Fe-2S ferredoxin-like FAD-binding/transporter-associated domain-like 11
Putative DNA-binding domain Anticodon-binding domain of PheRS 11
PLP-dependent transferases PLP-dependent transferases 11
Siroheme synthase middle domains-like Tetrapyrrole methylase 11
FliG FliG 11
CheC-like Surface presentation of antigens (SPOA) 11
P-loop containing nucleoside triphosphate hydrolases HprK N-terminal domain-like 11
Hsp33 domain HSP33 redox switch-like 11
Regulatory protein AraC Homeodomain-like 11
Periplasmic binding protein-like II Periplasmic binding protein-like II 11
Pre-protein crosslinking domain of SecA Helical scaffold and wing domains of SecA 11
ValRS/IleRS/LeuRS editing domain tRNA-binding arm 11
P-loop containing nucleoside triphosphate hydrolases Pre-protein crosslinking domain of SecA 11
Periplasmic binding protein-like II Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain 11
Ribosomal protein L6 Ribosomal protein L6 11
PilZ domain-like PilZ domain-like 11
"Winged helix" DNA-binding domain Actin-like ATPase domain 11
Chaperone J-domain DnaJ/Hsp40 cysteine-rich domain 11
Ada DNA repair protein, N-terminal domain (N-Ada 10) TATA-box binding protein-like 11
HAD-like Ribosomal protein S5 domain 2-like 11
PreATP-grasp domain PreATP-grasp domain 11
(Trans)glycosidases Beta-D-glucan exohydrolase, C-terminal domain 11
Nitrite/Sulfite reductase N-terminal domain-like Nitrite/Sulfite reductase N-terminal domain-like 11
NTF2-like Sec-C motif 11
Ribokinase-like Thiamin phosphate synthase 11
ACT-like P-loop containing nucleoside triphosphate hydrolases 11
Phospholipase D/nuclease LexA/Signal peptidase 11
Ribokinase-like Nucleotidylyl transferase 11
PPK N-terminal domain-like Phospholipase D/nuclease 11
Acetyl-CoA synthetase-like ACP-like 11
P-loop containing nucleoside triphosphate hydrolases Prokaryotic type KH domain (KH-domain type II) 11
Barwin-like endoglucanases Sporulation related repeat 11
Molybdenum cofactor biosynthesis proteins MoeA C-terminal domain-like 11
GAF domain-like Phosphoenolpyruvate/pyruvate domain 11
Trigger factor ribosome-binding domain FKBP-like 11
Class I glutamine amidotransferase-like Adenine nucleotide alpha hydrolases-like 11
Methylesterase CheB, C-terminal domain PYP-like sensor domain (PAS domain) 11
Glutathione synthetase ATP-binding domain-like Carbamoyl phosphate synthetase, large subunit connection domain 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
Starch-binding domain-like (Trans)glycosidases 11
cAMP-binding domain-like CBS-domain pair 11
Ribulose-phoshate binding barrel Ribulose-phoshate binding barrel 11
DNA-glycosylase Nudix 11
His-Me finger endonucleases Type I dockerin domain 11
Obg GTP-binding protein N-terminal domain P-loop containing nucleoside triphosphate hydrolases 11
Quinoprotein alcohol dehydrogenase-like Quinoprotein alcohol dehydrogenase-like 11
Dihydropteroate synthetase-like Methionine synthase domain 11
Carbamate kinase-like NAD(P)-binding Rossmann-fold domains 11
Flavoproteins Riboflavin synthase domain-like 11
Heat shock protein 70kD (HSP70), peptide-binding domain Heat shock protein 70kD (HSP70), C-terminal subdomain 11
DPP6 N-terminal domain-like Metallo-dependent hydrolases 11
Nucleic acid-binding proteins S-adenosyl-L-methionine-dependent methyltransferases 11
ParB/Sulfiredoxin KorB DNA-binding domain-like 11
ThrRS/AlaRS common domain Class II aaRS ABD-related 11
Glutamine synthetase, N-terminal domain Glutamine synthetase/guanido kinase 11
NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
lambda integrase-like, N-terminal domain DNA breaking-rejoining enzymes 11
P-loop containing nucleoside triphosphate hydrolases FtsH protease domain-like 11
Glutathione synthetase ATP-binding domain-like Glutathione synthetase ATP-binding domain-like 11
Nudix Nudix 11
FAD-binding/transporter-associated domain-like Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain 11
Protease propeptides/inhibitors Subtilisin-like 11
beta-Galactosidase/glucuronidase domain beta-Galactosidase/glucuronidase domain 11
Nucleic acid-binding proteins Putative DNA-binding domain 11
DNA primase core DNA primase DnaG, C-terminal domain 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Nucleic acid-binding proteins 11
Transcription factor NusA, N-terminal domain Prokaryotic type KH domain (KH-domain type II) 11
Putative DNA-binding domain Class II aaRS and biotin synthetases 11
beta-Galactosidase/glucuronidase domain (Trans)glycosidases 11
Voltage-gated potassium channels NAD(P)-binding Rossmann-fold domains 11
P-loop containing nucleoside triphosphate hydrolases TRCF domain-like 11
2Fe-2S ferredoxin-like CO dehydrogenase flavoprotein C-terminal domain-like 11
PurM C-terminal domain-like Class I glutamine amidotransferase-like 11
Ribosomal L11/L12e N-terminal domain Ribosomal protein L11, C-terminal domain 11
FMN-binding split barrel UbiD C-terminal domain-like 11
DNase I-like Type I dockerin domain 11
Ribonuclease H-like HRDC-like 11
6-phosphogluconate dehydrogenase C-terminal domain-like UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 11
Bacterial muramidases Lysozyme-like 11
N-terminal domain of MutM-like DNA repair proteins Glucocorticoid receptor-like (DNA-binding domain) 11
Adenine nucleotide alpha hydrolases-like PheT/TilS domain 11
Adenine nucleotide alpha hydrolases-like MesJ substrate recognition domain-like 11
ACT-like Formyltransferase 11
Tetrahydrobiopterin biosynthesis enzymes-like Tetrahydrobiopterin biosynthesis enzymes-like 11
vWA-like Type I dockerin domain 11
RuvA domain 2-like DNA helicase RuvA subunit, C-terminal domain 11
GIY-YIG endonuclease C-terminal UvrC-binding domain of UvrB 11
Ada DNA repair protein, N-terminal domain (N-Ada 10) Homeodomain-like 11
NAD(P)-binding Rossmann-fold domains 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
Metalloproteases ("zincins"), catalytic domain PDZ domain-like 11
alpha-helical ferredoxin Nucleotide-binding domain 11
Class I glutamine amidotransferase-like GMP synthetase C-terminal dimerisation domain 11
NAD(P)-binding Rossmann-fold domains Succinyl-CoA synthetase domains 11
NAD(P)-binding Rossmann-fold domains Siroheme synthase middle domains-like 11
beta-lactamase/transpeptidase-like TPR-like 11
Histidine-containing phosphotransfer domain, HPT domain HD-domain/PDEase-like 11
Transcription factor NusA, N-terminal domain Rad51 N-terminal domain-like 11
Nucleotidylyl transferase tRNA-binding arm 11
Dimeric alpha+beta barrel Dimeric alpha+beta barrel 11
Nucleic acid-binding proteins Rad51 N-terminal domain-like 11
Tex N-terminal region-like Ribonuclease H-like 11
(Phosphotyrosine protein) phosphatases II NAD kinase/diacylglycerol kinase-like 11
PreATP-grasp domain Carbamoyl phosphate synthetase, large subunit connection domain 11
Cytochrome c Rhodanese/Cell cycle control phosphatase 11
Enolase C-terminal domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 11
Thioredoxin-like Thioredoxin-like 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase HSP90 C-terminal domain 11
Prokaryotic type KH domain (KH-domain type II) Prokaryotic type KH domain (KH-domain type II) 11
Class II aaRS and biotin synthetases YbaK/ProRS associated domain 11
Molybdenum cofactor-binding domain Molybdenum cofactor-binding domain 11
Outer membrane efflux proteins (OEP) OmpA-like 11
S-adenosylmethionine synthetase S-adenosylmethionine synthetase 11
Rudiment single hybrid motif Single hybrid motif 11
Nucleic acid-binding proteins PheT/TilS domain 11
Phase 1 flagellin Phase 1 flagellin 11
N-terminal domain of DnaB helicase P-loop containing nucleoside triphosphate hydrolases 11
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphoenolpyruvate/pyruvate domain 11
Starch-binding domain-like Glycosyl hydrolase domain 11
FGAM synthase PurL, linker domain Class I glutamine amidotransferase-like 11
Methylesterase CheB, C-terminal domain EAL domain-like 11
DNA topoisomerase I domain DNA breaking-rejoining enzymes 11
Macro domain-like Zn-dependent exopeptidases 11
Acyl-CoA N-acyltransferases (Nat) Carbon-nitrogen hydrolase 11
Cysteine proteinases TPR-like 11
GAF domain-like EspE N-terminal domain-like 11
P-loop containing nucleoside triphosphate hydrolases TrpR-like 11
Chorismate mutase II 6-phosphogluconate dehydrogenase C-terminal domain-like 11
Cobalamin (vitamin B12)-binding domain Methionine synthase activation domain-like 11
FMN-linked oxidoreductases Alpha subunit of glutamate synthase, C-terminal domain 11
Aldolase post-HMGL domain-like 11
Dihydropteroate synthetase-like Cobalamin (vitamin B12)-binding domain 11
Carbamoyl phosphate synthetase, small subunit N-terminal domain Class I glutamine amidotransferase-like 11
FAD/NAD(P)-binding domain FAD/NAD(P)-binding domain 11
PUA domain-like S-adenosyl-L-methionine-dependent methyltransferases 11
Methylesterase CheB, C-terminal domain Nucleotide cyclase 11
PheT/TilS domain Putative DNA-binding domain 11
Translation proteins PRC-barrel domain 11
Nucleic acid-binding proteins Anticodon-binding domain of PheRS 11
lambda repressor-like DNA-binding domains Cyanase C-terminal domain 11
5' to 3' exonuclease, C-terminal subdomain Ribonuclease H-like 11
post-HMGL domain-like Single hybrid motif 11
ACT-like Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 11
Putative DNA-binding domain P-loop containing nucleoside triphosphate hydrolases 11
Class II aaRS and biotin synthetases Anticodon-binding domain of PheRS 11
TrmE connector domain P-loop containing nucleoside triphosphate hydrolases 11
PUA domain-like Ribosomal protein S5 domain 2-like 11
Eukaryotic type KH-domain (KH-domain type I) Nucleic acid-binding proteins 11
Chorismate mutase II NAD(P)-binding Rossmann-fold domains 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) SIS domain 11
S-adenosyl-L-methionine-dependent methyltransferases PYP-like sensor domain (PAS domain) 11
TSP type-3 repeat OmpA-like 11
FAD/NAD(P)-binding domain 4Fe-4S ferredoxins 11
TATA-box binding protein-like DNA-glycosylase 11
FabD/lysophospholipase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 11
Phospholipase D/nuclease P-loop containing nucleoside triphosphate hydrolases 11
"Winged helix" DNA-binding domain PLP-dependent transferases 11
Cytidine deaminase-like Dihydrofolate reductase-like 11
GroES-like GroES-like 11
PDZ domain-like ClpP/crotonase 11
NusB-like S-adenosyl-L-methionine-dependent methyltransferases 11
DnaJ/Hsp40 cysteine-rich domain HSP40/DnaJ peptide-binding domain 11
PK beta-barrel domain-like PK C-terminal domain-like 11
H-NS histone-like proteins H-NS histone-like proteins 11
Class II aaRS and biotin synthetases Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) 11
5' to 3' exonuclease, C-terminal subdomain DNA/RNA polymerases 11
Methionine synthase domain Cobalamin (vitamin B12)-binding domain 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases Nucleic acid-binding proteins 11
GAF domain-like Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain 11
Glutathione synthetase ATP-binding domain-like Phosphohistidine domain 11
C-type lectin-like S-adenosyl-L-methionine-dependent methyltransferases 11
FGAM synthase PurL, linker domain PurM C-terminal domain-like 11
Nucleotidyltransferase substrate binding subunit/domain HD-domain/PDEase-like 11
Translation proteins Initiation factor IF2/eIF5b, domain 3 11
FAD/NAD(P)-binding domain HI0933 insert domain-like 11
Aldolase Single hybrid motif 11
YhbC-like, N-terminal domain YhbC-like, C-terminal domain 11
Methylglyoxal synthase-like Cytidine deaminase-like 11
Carbamate kinase-like Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 11
NAD(P)-binding Rossmann-fold domains Tetrapyrrole methylase 11
Nucleic acid-binding proteins GAD domain-like 11
PIN domain-like DNA/RNA polymerases 11
Oxidoreductase molybdopterin-binding domain E set domains 11
Aspartate/glutamate racemase Aspartate/glutamate racemase 11
"Winged helix" DNA-binding domain C-terminal domain of transcriptional repressors 11
Ribosomal protein S5 domain 2-like Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 11
all-alpha NTP pyrophosphatases all-alpha NTP pyrophosphatases 11
Actin-like ATPase domain Heat shock protein 70kD (HSP70), peptide-binding domain 11
Glutamyl tRNA-reductase catalytic, N-terminal domain Glutamyl tRNA-reductase dimerization domain 11
C-terminal UvrC-binding domain of UvrB RuvA domain 2-like 11
FAD/NAD(P)-binding domain Nitrite and sulphite reductase 4Fe-4S domain-like 11
Formate/glycerate dehydrogenase catalytic domain-like ACT-like 11
"Winged helix" DNA-binding domain Chorismate lyase-like 11
Homeodomain-like Ribonuclease H-like 11
Nucleic acid-binding proteins DNA helicase RuvA subunit, C-terminal domain 11
Invasin/intimin cell-adhesion fragments 3-carboxy-cis,cis-mucoante lactonizing enzyme 11
Nucleotidylyl transferase Alpha-L RNA-binding motif 11
dsRNA-binding domain-like Ribosomal protein S5 domain 2-like 11
Ribonuclease H-like Nucleic acid-binding proteins 11
Nucleotidylyl transferase Riboflavin kinase-like 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases tRNA-binding arm 11
Prokaryotic type KH domain (KH-domain type II) Rad51 N-terminal domain-like 11
Tex N-terminal region-like RuvA domain 2-like 11
P-loop containing nucleoside triphosphate hydrolases C-terminal UvrC-binding domain of UvrB 11
Quinoprotein alcohol dehydrogenase-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Metallo-hydrolase/oxidoreductase Rhodanese/Cell cycle control phosphatase 11
Sialidases Sialidases 11
TGS-like Class II aaRS ABD-related 11
HprK N-terminal domain-like Isocitrate/Isopropylmalate dehydrogenase-like 11
Ada DNA repair protein, N-terminal domain (N-Ada 10) DNA-glycosylase 11
Zinc beta-ribbon DNA primase core 11
TGS-like Class II aaRS and biotin synthetases 11
Methylesterase CheB, C-terminal domain S-adenosyl-L-methionine-dependent methyltransferases 11
Glutathione synthetase ATP-binding domain-like Single hybrid motif 11
Nqo1 FMN-binding domain-like alpha-helical ferredoxin 11
Riboflavin synthase domain-like Riboflavin synthase domain-like 11
P-loop containing nucleoside triphosphate hydrolases Tropomyosin 11
RuvA domain 2-like RuvA domain 2-like 11
Adenine nucleotide alpha hydrolases-like Argininosuccinate synthetase, C-terminal domain 11
Homeodomain-like Probable bacterial effector-binding domain 11
Elongation factor Ts (EF-Ts), dimerisation domain Elongation factor Ts (EF-Ts), dimerisation domain 11
Invasin/intimin cell-adhesion fragments TSP type-3 repeat 11
PIN domain-like Ribonuclease H-like 11
Trypsin-like serine proteases SMAD/FHA domain 11
Ribonuclease PH domain 2-like Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 11
Ribonuclease H-like RuvA domain 2-like 11
His-Me finger endonucleases DNase I-like 11
PIN domain-like P-loop containing nucleoside triphosphate hydrolases 11
S13-like H2TH domain Glucocorticoid receptor-like (DNA-binding domain) 11
Periplasmic binding protein-like II Lysozyme-like 11
Chemotaxis receptor methyltransferase CheR, N-terminal domain PYP-like sensor domain (PAS domain) 11
Class II aaRS and biotin synthetases GAD domain-like 11
N-terminal domain of bifunctional PutA protein FAD-linked oxidoreductase 11
Metalloproteases ("zincins"), catalytic domain SMAD/FHA domain 11
Ribosomal protein L7/12, oligomerisation (N-terminal) domain ClpS-like 11
Carbamate kinase-like Acyl-CoA N-acyltransferases (Nat) 11
Concanavalin A-like lectins/glucanases BT0923-like 11
Coiled-coil domain of nucleotide exchange factor GrpE Head domain of nucleotide exchange factor GrpE 11
Ribosomal protein S5 domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
CorA soluble domain-like Magnesium transport protein CorA, transmembrane region 11
MFS general substrate transporter MFS general substrate transporter 11
Putative DNA-binding domain Initiation factor IF2/eIF5b, domain 3 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain III 11
Thioredoxin-like FAD/NAD(P)-binding domain 11
PreATP-grasp domain Single hybrid motif 11
PurM C-terminal domain-like PurM C-terminal domain-like 11
Ribosomal protein S5 domain 2-like HSP90 C-terminal domain 11
Cupredoxins Cupredoxins 11
Prokaryotic type KH domain (KH-domain type II) Ribosomal protein S3 C-terminal domain 11
DNA repair protein MutS, domain II P-loop containing nucleoside triphosphate hydrolases 11
Transmembrane di-heme cytochromes a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 11
Aldolase 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 11
Epsilon subunit of F1F0-ATP synthase N-terminal domain Epsilon subunit of F1F0-ATP synthase C-terminal domain 11
Urease metallochaperone UreE, N-terminal domain Urease metallochaperone UreE, C-terminal domain 11
Thioredoxin-like TPR-like 11
Rho N-terminal domain-like Nucleic acid-binding proteins 11
Galactose mutarotase-like E set domains 11
YVTN repeat-like/Quinoprotein amine dehydrogenase MetI-like 11
N-terminal domain of bifunctional PutA protein ALDH-like 11
Chorismate mutase II ACT-like 11
Translation proteins ThrRS/AlaRS common domain 11
FAD-linked reductases, C-terminal domain 4Fe-4S ferredoxins 11
DPP6 N-terminal domain-like DPP6 N-terminal domain-like 11
alpha/beta-Hydrolases TPR-like 11
Nitrite and sulphite reductase 4Fe-4S domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 11
Acyl-CoA N-acyltransferases (Nat) Thioesterase/thiol ester dehydrase-isomerase 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
CO dehydrogenase ISP C-domain like FAD-binding/transporter-associated domain-like 11
Flavoproteins Ferredoxin reductase-like, C-terminal NADP-linked domain 11
GAF domain-like P-loop containing nucleoside triphosphate hydrolases 11
PHP14-like Phospholipase D/nuclease 11
P-loop containing nucleoside triphosphate hydrolases CarD-like 11
DNA/RNA polymerases Lesion bypass DNA polymerase (Y-family), little finger domain 11
Formyltransferase FMT C-terminal domain-like 11
Aldolase AFP III-like domain 11
"Winged helix" DNA-binding domain Class II aaRS and biotin synthetases 11
Nucleotidylyl transferase Ribosomal protein L25-like 11
vWA-like Quinoprotein alcohol dehydrogenase-like 11
PreATP-grasp domain Methylglyoxal synthase-like 11
MoeA N-terminal region -like MoeA C-terminal domain-like 11
DNA repair protein MutS, domain I P-loop containing nucleoside triphosphate hydrolases 11
Transcription factor NusA, N-terminal domain Nucleic acid-binding proteins 11
Fe,Mn superoxide dismutase (SOD), N-terminal domain Fe,Mn superoxide dismutase (SOD), C-terminal domain 11
Carbamoyl phosphate synthetase, large subunit connection domain Methylglyoxal synthase-like 11
Trigger factor ribosome-binding domain Triger factor/SurA peptide-binding domain-like 11
DNA clamp DNA clamp 11
PheT/TilS domain Anticodon-binding domain of PheRS 11
DNA repair protein MutS, domain III P-loop containing nucleoside triphosphate hydrolases 11
PA domain Subtilisin-like 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) PRTase-like 11
Dihydropteroate synthetase-like Methionine synthase activation domain-like 11
DNA ligase/mRNA capping enzyme, catalytic domain BRCT domain 11
DnaK suppressor protein DksA, alpha-hairpin domain Glucocorticoid receptor-like (DNA-binding domain) 11
GroEL equatorial domain-like GroEL-intermediate domain like 11
Homeodomain-like DNA-glycosylase 11
Fic-like "Winged helix" DNA-binding domain 11
Chemotaxis receptor methyltransferase CheR, N-terminal domain Nucleotide cyclase 11
TSP type-3 repeat 3-carboxy-cis,cis-mucoante lactonizing enzyme 11
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphohistidine domain 11
Ribosomal protein S5 domain 2-like DNA mismatch repair protein MutL 11
FAD/NAD(P)-binding domain Nitrite/Sulfite reductase N-terminal domain-like 11
Insert subdomain of RNA polymerase alpha subunit RBP11-like subunits of RNA polymerase 11
Nucleic acid-binding proteins Prokaryotic type KH domain (KH-domain type II) 11
Quinoprotein alcohol dehydrogenase-like Nucleotide cyclase 11
FAD-linked oxidoreductase ALDH-like 11
CheY-like PP2C-like 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Adenine nucleotide alpha hydrolases-like 11
YrdC/RibB RibA-like 11
Adenine nucleotide alpha hydrolases-like GMP synthetase C-terminal dimerisation domain 11
NagB/RpiA/CoA transferase-like D-ribose-5-phosphate isomerase (RpiA), lid domain 11
CBS-domain pair Inosine monophosphate dehydrogenase (IMPDH) 11
PK beta-barrel domain-like Phosphoenolpyruvate/pyruvate domain 11
ACT-like PYP-like sensor domain (PAS domain) 11
Actin-like ATPase domain Heat shock protein 70kD (HSP70), C-terminal subdomain 11
NAD(P)-binding Rossmann-fold domains Glutamyl tRNA-reductase dimerization domain 11
PheT/TilS domain Class II aaRS and biotin synthetases 11
Ribonuclease PH domain 2-like Ribonuclease PH domain 2-like 11
ACT-like Homeodomain-like 11
MoeA N-terminal region -like Molybdenum cofactor biosynthesis proteins 11
RNase III domain-like dsRNA-binding domain-like 11
Adenine nucleotide alpha hydrolases-like DHS-like NAD/FAD-binding domain 11
MesJ substrate recognition domain-like PheT/TilS domain 11
P-loop containing nucleoside triphosphate hydrolases LexA/Signal peptidase 11
SMAD/FHA domain SMAD/FHA domain 11
CO dehydrogenase ISP C-domain like CO dehydrogenase flavoprotein C-terminal domain-like 11
Peptidase/esterase 'gauge' domain alpha/beta-Hydrolases 11
S-adenosyl-L-methionine-dependent methyltransferases EAL domain-like 11
DNA repair protein MutS, domain II DNA repair protein MutS, domain III 11
RBP11-like subunits of RNA polymerase C-terminal domain of RNA polymerase alpha subunit 11
"Winged helix" DNA-binding domain C-terminal domain of arginine repressor 11
Putative DNA-binding domain CheY-like 11
P-loop containing nucleoside triphosphate hydrolases Acyl-CoA N-acyltransferases (Nat) 11
ALDH-like ALDH-like 11
Nucleotidyltransferase Nucleotidyltransferase 11
Rho N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 11
PurS-like PurM N-terminal domain-like 11
Methylesterase CheB, C-terminal domain Chemotaxis receptor methyltransferase CheR, N-terminal domain 11
NAD(P)-binding Rossmann-fold domains UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 11
UBA-like Elongation factor Ts (EF-Ts), dimerisation domain 11
Chemotaxis receptor methyltransferase CheR, N-terminal domain EAL domain-like 11
Phosphoenolpyruvate/pyruvate domain PK C-terminal domain-like 11
LysM domain LysM domain 11
P-loop containing nucleoside triphosphate hydrolases Helical scaffold and wing domains of SecA 11
S-adenosyl-L-methionine-dependent methyltransferases Nucleotide cyclase 11

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