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Domain combination pairs in Methylocella silvestris BL2

All pairs of domain combinations at the superfamily level are listed here.
The identification of domain pairs does not account for the possibility of non-contiguous domains. Inserted, or interlaced, domains are seen as having a simple pair ordering.

  • For a list of unique full length architectures for this genome click here (can be slow).
Adjacent domain pairs graph

Graph of adjacent domain pairs.


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Domain combination pairs

702 domain combination pairs.
Click on a column heading to sort that column, or the 'View' button to see domain architetures for that domain pair combination.

Superfamily (N) Superfamily (C) Number of occurrances Number unique
P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases 2814
Homodimeric domain of signal transducing histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 2817
"Winged helix" DNA-binding domain Periplasmic binding protein-like II 211
Homeodomain-like Tetracyclin repressor-like, C-terminal domain 181
CheY-like C-terminal effector domain of the bipartite response regulators 162
Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain 167
PYP-like sensor domain (PAS domain) ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 1410
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB transmembrane domain 146
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 146
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB transmembrane domain 146
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 146
GroES-like NAD(P)-binding Rossmann-fold domains 133
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 124
Thioredoxin-like GST C-terminal domain-like 121
NAD(P)-binding Rossmann-fold domains 6-phosphogluconate dehydrogenase C-terminal domain-like 124
PYP-like sensor domain (PAS domain) Homodimeric domain of signal transducing histidine kinase 108
Sigma2 domain of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 103
Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) 106
PYP-like sensor domain (PAS domain) PYP-like sensor domain (PAS domain) 109
PreATP-grasp domain Glutathione synthetase ATP-binding domain-like 106
Formate/glycerate dehydrogenase catalytic domain-like NAD(P)-binding Rossmann-fold domains 93
CheY-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 96
P-loop containing nucleoside triphosphate hydrolases Translation proteins 97
Calcium ATPase, transduction domain A HAD-like 97
CheY-like Homodimeric domain of signal transducing histidine kinase 96
cAMP-binding domain-like "Winged helix" DNA-binding domain 91
Actin-like ATPase domain Actin-like ATPase domain 93
FAD/NAD(P)-binding domain FAD/NAD-linked reductases, dimerisation (C-terminal) domain 84
FAD/NAD(P)-binding domain FAD-linked reductases, C-terminal domain 82
NAD(P)-binding Rossmann-fold domains Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 84
FAD/NAD(P)-binding domain FAD/NAD(P)-binding domain 84
Thiamin diphosphate-binding fold (THDP-binding) TK C-terminal domain-like 76
PurM N-terminal domain-like PurM C-terminal domain-like 72
PreATP-grasp domain Rudiment single hybrid motif 74
Glutathione synthetase ATP-binding domain-like Rudiment single hybrid motif 74
TPR-like TPR-like 76
P-loop containing nucleoside triphosphate hydrolases Homeodomain-like 73
Thiolase-like Thiolase-like 61
Nucleotidylyl transferase Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 65
P-loop containing nucleoside triphosphate hydrolases Ribosomal protein S5 domain 2-like 64
Calcium ATPase, transduction domain A Calcium ATPase, transmembrane domain M 65
Formate dehydrogenase/DMSO reductase, domains 1-3 ADC-like 63
Homeodomain-like Homeodomain-like 62
HlyD-like secretion proteins HlyD-like secretion proteins 63
Acetyl-CoA synthetase-like ACP-like 65
Riboflavin synthase domain-like Ferredoxin reductase-like, C-terminal NADP-linked domain 65
Nucleic acid-binding proteins Nucleic acid-binding proteins 64
Calcium ATPase, transmembrane domain M HAD-like 65
Translation proteins EF-G C-terminal domain-like 53
Multidrug resistance efflux transporter EmrE Multidrug resistance efflux transporter EmrE 54
(Trans)glycosidases Glycosyl hydrolase domain 55
Cytochrome c Cytochrome c 54
P-loop containing nucleoside triphosphate hydrolases EF-G C-terminal domain-like 53
GAF domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 54
CheY-like P-loop containing nucleoside triphosphate hydrolases 52
MurD-like peptide ligases, catalytic domain MurD-like peptide ligases, peptide-binding domain 53
HAMP domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 53
HAMP domain-like Homodimeric domain of signal transducing histidine kinase 53
Lysozyme-like beta-lactamase/transpeptidase-like 43
ABC transporter transmembrane region P-loop containing nucleoside triphosphate hydrolases 41
Rudiment single hybrid motif Single hybrid motif 43
Alpha-L RNA-binding motif Pseudouridine synthase 42
Nitrite/Sulfite reductase N-terminal domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 43
FabD/lysophospholipase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 43
P-loop containing nucleoside triphosphate hydrolases Hypothetical protein YjiA, C-terminal domain 41
Nucleotide cyclase EAL domain-like 43
Class I glutamine amidotransferase-like Homeodomain-like 42
FAD-binding/transporter-associated domain-like FAD-linked oxidases, C-terminal domain 43
Composite domain of metallo-dependent hydrolases Metallo-dependent hydrolases 43
Folate-binding domain Aminomethyltransferase beta-barrel domain 43
Glutathione synthetase ATP-binding domain-like Single hybrid motif 43
Ferredoxin reductase-like, C-terminal NADP-linked domain 2Fe-2S ferredoxin-like 43
Aminoacid dehydrogenase-like, N-terminal domain NAD(P)-binding Rossmann-fold domains 42
CoA-dependent acyltransferases CoA-dependent acyltransferases 43
CoA-dependent acyltransferases ACP-like 43
DNA ligase/mRNA capping enzyme, catalytic domain Nucleic acid-binding proteins 43
2Fe-2S ferredoxin-like CO dehydrogenase ISP C-domain like 41
CheY-like Homeodomain-like 41
PreATP-grasp domain Single hybrid motif 43
EF-G C-terminal domain-like EF-G C-terminal domain-like 42
Cupredoxins Cupredoxins 43
Thiamin diphosphate-binding fold (THDP-binding) DHS-like NAD/FAD-binding domain 41
Riboflavin synthase domain-like 2Fe-2S ferredoxin-like 43
CoA-dependent acyltransferases Acetyl-CoA synthetase-like 43
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Ribosomal protein S5 domain 2-like 44
Triger factor/SurA peptide-binding domain-like FKBP-like 43
Trypsin-like serine proteases PDZ domain-like 43
CheY-like CheY-like 33
Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 31
Nqo1 middle domain-like Nqo1C-terminal domain-like 33
PYP-like sensor domain (PAS domain) EAL domain-like 32
Acyl-CoA dehydrogenase NM domain-like Acyl-CoA dehydrogenase C-terminal domain-like 32
Chaperone J-domain HSP40/DnaJ peptide-binding domain 32
Phospholipase D/nuclease Phospholipase D/nuclease 33
LuxS/MPP-like metallohydrolase LuxS/MPP-like metallohydrolase 31
Glutathione synthetase ATP-binding domain-like Phosphohistidine domain 33
Nitrite and sulphite reductase 4Fe-4S domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 32
Double Clp-N motif P-loop containing nucleoside triphosphate hydrolases 32
2Fe-2S ferredoxin-like 4Fe-4S ferredoxins 33
E set domains Glycosyl hydrolase domain 33
ValRS/IleRS/LeuRS editing domain Nucleotidylyl transferase 33
Nucleotidylyl transferase An anticodon-binding domain of class I aminoacyl-tRNA synthetases 31
P-loop containing nucleoside triphosphate hydrolases Class I glutamine amidotransferase-like 31
PDZ domain-like PDZ domain-like 32
RmlC-like cupins Homeodomain-like 32
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 31
GroEL equatorial domain-like GroEL apical domain-like 32
CBS-domain pair FAD-binding/transporter-associated domain-like 31
Glutamine synthetase, N-terminal domain Glutamine synthetase/guanido kinase 31
Nitrite/Sulfite reductase N-terminal domain-like Nitrite/Sulfite reductase N-terminal domain-like 32
E set domains (Trans)glycosidases 33
GroEL equatorial domain-like GroEL-intermediate domain like 32
Nqo1 FMN-binding domain-like Nqo1C-terminal domain-like 33
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 31
P-loop containing nucleoside triphosphate hydrolases "Winged helix" DNA-binding domain 33
Translation proteins EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 33
GroEL-intermediate domain like GroEL apical domain-like 32
P-loop containing nucleoside triphosphate hydrolases EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 33
HSP40/DnaJ peptide-binding domain HSP40/DnaJ peptide-binding domain 32
NAD(P)-binding Rossmann-fold domains ACT-like 32
ACP-like alpha/beta-Hydrolases 32
Translation proteins SH3-like domain Nucleic acid-binding proteins 32
lambda repressor-like DNA-binding domains RmlC-like cupins 31
Nucleic acid-binding proteins RuvA domain 2-like 33
Acetyl-CoA synthetase-like alpha/beta-Hydrolases 32
CoA-dependent acyltransferases alpha/beta-Hydrolases 32
P-loop containing nucleoside triphosphate hydrolases post-AAA+ oligomerization domain-like 32
Nqo1 FMN-binding domain-like Nqo1 middle domain-like 33
Class II aaRS and biotin synthetases Class II aaRS ABD-related 33
Phosphoglucomutase, first 3 domains Phosphoglucomutase, first 3 domains 31
ValRS/IleRS/LeuRS editing domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 33
PYP-like sensor domain (PAS domain) Nucleotide cyclase 32
ACT-like ACT-like 33
Galactose mutarotase-like E set domains 31
Pheromone-binding domain of LuxR-like quorum-sensing transcription factors C-terminal effector domain of the bipartite response regulators 31
PYP-like sensor domain (PAS domain) GAF domain-like 32
Phosphoglucomutase, first 3 domains Phosphoglucomutase, C-terminal domain 31
GAF domain-like Homodimeric domain of signal transducing histidine kinase 33
GreA transcript cleavage protein, N-terminal domain FKBP-like 21
Thiolase-like ACP-like 22
Ribosomal protein S5 domain 2-like Type II DNA topoisomerase 22
2Fe-2S ferredoxin-like alpha-helical ferredoxin 21
Adenine nucleotide alpha hydrolases-like Adenine nucleotide alpha hydrolases-like 21
Thiamin diphosphate-binding fold (THDP-binding) Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 22
Cupredoxins Cytochrome c 22
PUA domain-like P-loop containing nucleoside triphosphate hydrolases 21
MOP-like MOP-like 21
Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like 22
6-phosphogluconate dehydrogenase C-terminal domain-like ClpP/crotonase 22
RuBisCO, large subunit, small (N-terminal) domain RuBisCo, C-terminal domain 21
Cation efflux protein transmembrane domain-like Cation efflux protein cytoplasmic domain-like 22
Aldolase post-HMGL domain-like 22
HMA, heavy metal-associated domain Calcium ATPase, transduction domain A 22
TPR-like UDP-Glycosyltransferase/glycogen phosphorylase 22
Enolase N-terminal domain-like Enolase C-terminal domain-like 21
Nucleotidyltransferase ACT-like 22
MurE/MurF N-terminal domain MurD-like peptide ligases, catalytic domain 21
Resolvase-like Homeodomain-like 21
GAF domain-like GAF domain-like 21
MFS general substrate transporter MFS general substrate transporter 22
PYP-like sensor domain (PAS domain) CheY-like 22
MoeA N-terminal region -like MoeA C-terminal domain-like 21
Phosphohistidine domain Phosphoenolpyruvate/pyruvate domain 22
Ribosomal protein S5 domain 2-like Ribonuclease PH domain 2-like 22
HMA, heavy metal-associated domain HAD-like 22
Nucleotidyltransferase HD-domain/PDEase-like 22
Nucleotidyltransferase Nucleotidyltransferase substrate binding subunit/domain 22
HD-domain/PDEase-like ACT-like 22
CheY-like Nucleotide cyclase 22
Single hybrid motif Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 21
TK C-terminal domain-like Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 22
P-loop containing nucleoside triphosphate hydrolases MOP-like 21
6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 22
NAD(P)-binding Rossmann-fold domains ClpP/crotonase 22
EF-G C-terminal domain-like Ribosomal protein S5 domain 2-like 21
"Winged helix" DNA-binding domain "Winged helix" DNA-binding domain 22
Single hybrid motif CoA-dependent acyltransferases 21
N-terminal domain of alpha and beta subunits of F1 ATP synthase P-loop containing nucleoside triphosphate hydrolases 21
"Winged helix" DNA-binding domain GAF domain-like 21
GAF domain-like P-loop containing nucleoside triphosphate hydrolases 22
"Winged helix" DNA-binding domain GntR ligand-binding domain-like 21
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Type II DNA topoisomerase 22
PHP14-like Phospholipase D/nuclease 22
FabD/lysophospholipase-like ACP-like 22
GAF domain-like EAL domain-like 22
2Fe-2S ferredoxin-like Formate dehydrogenase/DMSO reductase, domains 1-3 22
NAD(P)-binding Rossmann-fold domains Succinyl-CoA synthetase domains 21
CO dehydrogenase molybdoprotein N-domain-like Molybdenum cofactor-binding domain 22
MurCD N-terminal domain MurD-like peptide ligases, peptide-binding domain 21
PPK N-terminal domain-like PHP14-like 22
Nucleotide-diphospho-sugar transferases Trimeric LpxA-like enzymes 21
HMA, heavy metal-associated domain Calcium ATPase, transmembrane domain M 22
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex CoA-dependent acyltransferases 21
Protein kinase-like (PK-like) P-loop containing nucleoside triphosphate hydrolases 22
PPK N-terminal domain-like Phospholipase D/nuclease 22
Thiolase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 22
PH0987 N-terminal domain-like Cyclophilin-like 22
Molybdenum cofactor biosynthesis proteins MoeA C-terminal domain-like 21
P-loop containing nucleoside triphosphate hydrolases Restriction endonuclease-like 22
Adenine nucleotide alpha hydrolases-like DHS-like NAD/FAD-binding domain 21
N-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase 21
MurCD N-terminal domain MurD-like peptide ligases, catalytic domain 21
Molybdenum cofactor-binding domain Molybdenum cofactor-binding domain 21
MurE/MurF N-terminal domain MurD-like peptide ligases, peptide-binding domain 21
ClpP/crotonase ClpP/crotonase 21
Translation proteins Ribosomal protein S5 domain 2-like 21
alpha-helical ferredoxin Nucleotide-binding domain 22
IlvD/EDD N-terminal domain-like LeuD/IlvD-like 21
Acylphosphatase/BLUF domain-like YrdC/RibB 21
DPP6 N-terminal domain-like alpha/beta-Hydrolases 21
ThrRS/AlaRS common domain Class II aaRS and biotin synthetases 22
PLP-binding barrel Alanine racemase C-terminal domain-like 21
MoeA N-terminal region -like Molybdenum cofactor biosynthesis proteins 21
Lysozyme-like PGBD-like 21
PGBD-like L,D-transpeptidase catalytic domain-like 21
NagB/RpiA/CoA transferase-like NagB/RpiA/CoA transferase-like 22
Type II DNA topoisomerase GyrA/ParC C-terminal domain-like 22
Probable ACP-binding domain of malonyl-CoA ACP transacylase ACP-like 22
Serine metabolism enzymes domain ACT-like 21
MetI-like MetI-like 22
"Winged helix" DNA-binding domain PLP-dependent transferases 21
tRNA-binding arm Class II aaRS and biotin synthetases 21
"Winged helix" DNA-binding domain MOP-like 21
Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases 22
Formate/glycerate dehydrogenase catalytic domain-like ACT-like 21
4Fe-4S ferredoxins Formate dehydrogenase/DMSO reductase, domains 1-3 22
CorA soluble domain-like Magnesium transport protein CorA, transmembrane region 21
Aldolase 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 21
Thiolase-like FabD/lysophospholipase-like 22
NAD(P)-binding Rossmann-fold domains Serine metabolism enzymes domain 21
DNA methylase specificity domain DNA methylase specificity domain 21
P-loop containing nucleoside triphosphate hydrolases C-terminal domain of alpha and beta subunits of F1 ATP synthase 21
Zn-dependent exopeptidases Bacterial exopeptidase dimerisation domain 21
"Winged helix" DNA-binding domain Dimeric alpha+beta barrel 21
PUA domain-like Ribosomal protein S5 domain 2-like 21
GAF domain-like Nucleotide cyclase 22
"Winged helix" DNA-binding domain S-adenosyl-L-methionine-dependent methyltransferases 22
alpha/beta-Hydrolases alpha/beta-Hydrolases 21
Nucleic acid-binding proteins Class II aaRS and biotin synthetases 22
Nucleic acid-binding proteins P-loop containing nucleoside triphosphate hydrolases 22
Formate/glycerate dehydrogenase catalytic domain-like Serine metabolism enzymes domain 21
Flavoproteins Ferredoxin reductase-like, C-terminal NADP-linked domain 11
Homodimeric domain of signal transducing histidine kinase CheW-like 11
Nucleotide-binding domain Nucleotide-binding domain 11
Tex N-terminal region-like Ribonuclease H-like 11
Phosphoenolpyruvate/pyruvate domain PK C-terminal domain-like 11
PK beta-barrel domain-like PK C-terminal domain-like 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase DNA mismatch repair protein MutL 11
Metallo-hydrolase/oxidoreductase Rhodanese/Cell cycle control phosphatase 11
DNA repair protein MutS, domain II DNA repair protein MutS, domain III 11
Methyl-accepting chemotaxis protein (MCP) signaling domain Homodimeric domain of signal transducing histidine kinase 11
Protease propeptides/inhibitors Subtilisin-like 11
HMA, heavy metal-associated domain HMA, heavy metal-associated domain 11
Glutamine synthetase/guanido kinase GatB/YqeY motif 11
Translation proteins "Winged helix" DNA-binding domain 11
FabD/lysophospholipase-like NAD(P)-binding Rossmann-fold domains 11
Ribosome binding protein Y (YfiA homologue) Nucleic acid-binding proteins 11
Transcription factor NusA, N-terminal domain Nucleic acid-binding proteins 11
Rhodanese/Cell cycle control phosphatase Rhodanese/Cell cycle control phosphatase 11
Leukotriene A4 hydrolase N-terminal domain Metalloproteases ("zincins"), catalytic domain 11
YebC-like PFL-like glycyl radical enzymes 11
DNA repair protein MutS, domain I P-loop containing nucleoside triphosphate hydrolases 11
Bacterial muramidases Lysozyme-like 11
Adenine nucleotide alpha hydrolases-like Argininosuccinate synthetase, C-terminal domain 11
Thiolase-like CoA-dependent acyltransferases 11
UDP-Glycosyltransferase/glycogen phosphorylase UDP-Glycosyltransferase/glycogen phosphorylase 11
Methyl-accepting chemotaxis protein (MCP) signaling domain Methyl-accepting chemotaxis protein (MCP) signaling domain 11
Ribonuclease H-like DNA/RNA polymerases 11
Terpenoid cyclases/Protein prenyltransferases Terpenoid cyclases/Protein prenyltransferases 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain ACT-like 11
Sm-like ribonucleoproteins cAMP-binding domain-like 11
Trypsin-like serine proteases His-Me finger endonucleases 11
Nucleotidylyl transferase Riboflavin kinase-like 11
PurM C-terminal domain-like PurM C-terminal domain-like 11
Glutathione synthetase ATP-binding domain-like Phosphoenolpyruvate/pyruvate domain 11
gp5 N-terminal domain-like Phage fibre proteins 11
S-adenosyl-L-methionine-dependent methyltransferases GroES-like 11
Glutathione synthetase ATP-binding domain-like Carbamoyl phosphate synthetase, large subunit connection domain 11
S-adenosyl-L-methionine-dependent methyltransferases ACP-like 11
HD-domain/PDEase-like TGS-like 11
FMN-linked oxidoreductases Alpha subunit of glutamate synthase, C-terminal domain 11
PreATP-grasp domain PreATP-grasp domain 11
FabD/lysophospholipase-like PLP-dependent transferases 11
Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 11
N-terminal domain of bifunctional PutA protein ALDH-like 11
NAD(P)-binding Rossmann-fold domains Siroheme synthase middle domains-like 11
PreATP-grasp domain post-HMGL domain-like 11
Creatinase/prolidase N-terminal domain Creatinase/aminopeptidase 11
Photosystem II reaction centre subunit H, transmembrane region PRC-barrel domain 11
Thioredoxin-like Six-hairpin glycosidases 11
PUA domain-like alpha/beta knot 11
GAF domain-like CheY-like 11
PK beta-barrel domain-like 2Fe-2S ferredoxin-like 11
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains HlyD-like secretion proteins 11
(Trans)glycosidases Beta-D-glucan exohydrolase, C-terminal domain 11
Transcription factor NusA, N-terminal domain Rad51 N-terminal domain-like 11
Acetyl-CoA synthetase-like Trimeric LpxA-like enzymes 11
P-loop containing nucleoside triphosphate hydrolases TPR-like 11
NAD(P)-binding Rossmann-fold domains TrkA C-terminal domain-like 11
Ribosomal protein S5 domain 2-like GHMP Kinase, C-terminal domain 11
Nucleotide-diphospho-sugar transferases IpsF-like 11
Aldolase Single hybrid motif 11
Domain of the SRP/SRP receptor G-proteins P-loop containing nucleoside triphosphate hydrolases 11
Translation proteins Initiation factor IF2/eIF5b, domain 3 11
Cytidine deaminase-like Dihydrofolate reductase-like 11
Chemotaxis receptor methyltransferase CheR, N-terminal domain S-adenosyl-L-methionine-dependent methyltransferases 11
Dihydropteroate synthetase-like Cobalamin (vitamin B12)-binding domain 11
DNA ligase/mRNA capping enzyme, catalytic domain RuvA domain 2-like 11
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphohistidine domain 11
FliG FliG 11
PK beta-barrel domain-like Ferredoxin reductase-like, C-terminal NADP-linked domain 11
TPR-like Caspase-like 11
Glutathione synthetase ATP-binding domain-like Succinyl-CoA synthetase domains 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
Thioredoxin-like Nqo1 middle domain-like 11
YhbC-like, N-terminal domain YhbC-like, C-terminal domain 11
Periplasmic binding protein-like II Ankyrin repeat 11
Nucleotidyltransferase Nucleotidyltransferase 11
Heat shock protein 70kD (HSP70), peptide-binding domain Heat shock protein 70kD (HSP70), C-terminal subdomain 11
Nucleotidyltransferase substrate binding subunit/domain ACT-like 11
Sigma2 domain of RNA polymerase sigma factors TPR-like 11
Methionine synthase domain Cobalamin (vitamin B12)-binding domain 11
Nucleotide-diphospho-sugar transferases RmlC-like cupins 11
NAD(P)-binding Rossmann-fold domains Isocitrate/Isopropylmalate dehydrogenase-like 11
Nucleic acid-binding proteins DNA helicase RuvA subunit, C-terminal domain 11
Thioredoxin-like Nqo1 FMN-binding domain-like 11
Methylglyoxal synthase-like Cytidine deaminase-like 11
Transmembrane di-heme cytochromes a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 11
S-adenosyl-L-methionine-dependent methyltransferases NAD(P)-binding Rossmann-fold domains 11
N-acetylmuramoyl-L-alanine amidase-like PGBD-like 11
Class II aaRS and biotin synthetases GAD domain-like 11
Rudiment single hybrid motif Cyclophilin-like 11
Heme-dependent catalase-like Class I glutamine amidotransferase-like 11
Nudix "Winged helix" DNA-binding domain 11
P-loop containing nucleoside triphosphate hydrolases Signal peptide-binding domain 11
FMN-dependent nitroreductase-like FMN-dependent nitroreductase-like 11
5' to 3' exonuclease, C-terminal subdomain DNA/RNA polymerases 11
Homo-oligomeric flavin-containing Cys decarboxylases, HFCD CoaB-like 11
NagB/RpiA/CoA transferase-like D-ribose-5-phosphate isomerase (RpiA), lid domain 11
post-HMGL domain-like Single hybrid motif 11
Ada DNA repair protein, N-terminal domain (N-Ada 10) Methylated DNA-protein cysteine methyltransferase domain 11
Nucleic acid-binding proteins GAD domain-like 11
Riboflavin synthase domain-like Riboflavin synthase domain-like 11
ISP domain Bet v1-like 11
PLP-dependent transferases Acetyl-CoA synthetase-like 11
dUTPase-like dUTPase-like 11
NAD(P)-binding Rossmann-fold domains Tetrapyrrole methylase 11
DNA primase core P-loop containing nucleoside triphosphate hydrolases 11
PP2C-like Protein kinase-like (PK-like) 11
YrdC/RibB RibA-like 11
Ribonuclease H-like Nucleic acid-binding proteins 11
Thioredoxin-like TPR-like 11
Histidine-containing phosphotransfer domain, HPT domain CheW-like 11
Flavoproteins Riboflavin synthase domain-like 11
Glucocorticoid receptor-like (DNA-binding domain) P-loop containing nucleoside triphosphate hydrolases 11
Ribonuclease PH domain 2-like Nucleic acid-binding proteins 11
C-terminal UvrC-binding domain of UvrB RuvA domain 2-like 11
EspE N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 11
FAD/NAD(P)-binding domain 4Fe-4S ferredoxins 11
RuvA domain 2-like DNA helicase RuvA subunit, C-terminal domain 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) Translation proteins 11
P-loop containing nucleoside triphosphate hydrolases Prokaryotic type KH domain (KH-domain type II) 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases tRNA-binding arm 11
E set domains E set domains 11
FAD-binding/transporter-associated domain-like Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain 11
P-loop containing nucleoside triphosphate hydrolases Initiation factor IF2/eIF5b, domain 3 11
Rudiment single hybrid motif PH0987 N-terminal domain-like 11
LysM domain Duplicated hybrid motif 11
L30e-like alpha/beta knot 11
Translation proteins Translation proteins 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain II 11
Glutathione synthetase ATP-binding domain-like post-HMGL domain-like 11
Nucleotide-binding domain 4Fe-4S ferredoxins 11
PRTase-like alpha/beta-Hydrolases 11
Ribosomal protein L6 Ribosomal protein L6 11
Formyltransferase FMT C-terminal domain-like 11
Putative DNA-binding domain Anticodon-binding domain of PheRS 11
GroES-like ACP-like 11
Class I glutamine amidotransferase-like Adenine nucleotide alpha hydrolases-like 11
Heme-dependent peroxidases Heme-dependent peroxidases 11
Trimeric LpxA-like enzymes Trimeric LpxA-like enzymes 11
PreATP-grasp domain Carbamoyl phosphate synthetase, large subunit connection domain 11
Rho N-terminal domain-like Nucleic acid-binding proteins 11
Periplasmic binding protein-like II ACT-like 11
Ribonuclease H-like HRDC-like 11
CBS-domain pair Inosine monophosphate dehydrogenase (IMPDH) 11
Apolipoprotein A-I Apolipoprotein A-I 11
Tubulin nucleotide-binding domain-like Tubulin C-terminal domain-like 11
Single hybrid motif alpha/beta-Hydrolases 11
Protein kinase-like (PK-like) C-type lectin-like 11
ACP-like PLP-dependent transferases 11
Voltage-gated potassium channels TrkA C-terminal domain-like 11
Thiolase-like GroES-like 11
Homocysteine S-methyltransferase Methionine synthase activation domain-like 11
Ada DNA repair protein, N-terminal domain (N-Ada 10) Homeodomain-like 11
Soluble quinoprotein glucose dehydrogenase Cytochrome c 11
DNA repair protein MutS, domain II P-loop containing nucleoside triphosphate hydrolases 11
Carbamoyl phosphate synthetase, small subunit N-terminal domain Class I glutamine amidotransferase-like 11
Pentapeptide repeat-like Pentapeptide repeat-like 11
Histidine-containing phosphotransfer domain, HPT domain Homodimeric domain of signal transducing histidine kinase 11
Glutathione synthetase ATP-binding domain-like Aldolase 11
Adenine nucleotide alpha hydrolases-like GMP synthetase C-terminal dimerisation domain 11
FAD/NAD(P)-binding domain HI0933 insert domain-like 11
Cyclophilin-like Cyclophilin-like 11
Fe-S cluster assembly (FSCA) domain-like P-loop containing nucleoside triphosphate hydrolases 11
PreATP-grasp domain Cyclophilin-like 11
Rho N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase HSP90 C-terminal domain 11
GIY-YIG endonuclease RuvA domain 2-like 11
DNA clamp DNA clamp 11
FAD-binding/transporter-associated domain-like alpha-helical ferredoxin 11
Nucleotidylyl transferase Alpha-L RNA-binding motif 11
RuvA domain 2-like JAB1/MPN domain 11
Aspartate/glutamate racemase Aspartate/glutamate racemase 11
Methionine synthase domain Methionine synthase activation domain-like 11
FAD/NAD(P)-binding domain Folate-binding domain 11
DinB/YfiT-like putative metalloenzymes C-type lectin-like 11
PRC-barrel domain PRC-barrel domain 11
C-terminal effector domain of the bipartite response regulators P-loop containing nucleoside triphosphate hydrolases 11
Ada DNA repair protein, N-terminal domain (N-Ada 10) Methylated DNA-protein cysteine methyltransferase, C-terminal domain 11
S-adenosyl-L-methionine-dependent methyltransferases Putative methyltransferase TM0872, insert domain 11
P-loop containing nucleoside triphosphate hydrolases Helical scaffold and wing domains of SecA 11
Putative DNA-binding domain Class II aaRS and biotin synthetases 11
Nucleotidyltransferase TGS-like 11
NusB-like S-adenosyl-L-methionine-dependent methyltransferases 11
Translation proteins ThrRS/AlaRS common domain 11
Homocysteine S-methyltransferase Methionine synthase domain 11
UDP-Glycosyltransferase/glycogen phosphorylase Six-hairpin glycosidases 11
HAMP domain-like Methyl-accepting chemotaxis protein (MCP) signaling domain 11
Radical SAM enzymes Nitrogenase accessory factor-like 11
RNase III domain-like dsRNA-binding domain-like 11
Ribonuclease H-like RuvA domain 2-like 11
GroES-like GroES-like 11
Thiolase-like S-adenosyl-L-methionine-dependent methyltransferases 11
Probable ACP-binding domain of malonyl-CoA ACP transacylase GroES-like 11
6-phosphogluconate dehydrogenase C-terminal domain-like UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 11
ValRS/IleRS/LeuRS editing domain tRNA-binding arm 11
Hypothetical protein SAV1430 Fe-S cluster assembly (FSCA) domain-like 11
Ribosomal protein S5 domain 2-like Nucleic acid-binding proteins 11
Histidine-containing phosphotransfer domain, HPT domain ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
RBP11-like subunits of RNA polymerase C-terminal domain of RNA polymerase alpha subunit 11
Thiolase-like Acetyl-CoA synthetase-like 11
NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains 11
N-terminal domain of MutM-like DNA repair proteins S13-like H2TH domain 11
Mechanosensitive channel protein MscS (YggB), transmembrane region Sm-like ribonucleoproteins 11
Urease metallochaperone UreE, N-terminal domain Urease metallochaperone UreE, C-terminal domain 11
P-loop containing nucleoside triphosphate hydrolases FtsH protease domain-like 11
Nucleotidylyl transferase tRNA-binding arm 11
Insert subdomain of RNA polymerase alpha subunit C-terminal domain of RNA polymerase alpha subunit 11
Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 4Fe-4S ferredoxins 11
PIN domain-like 5' to 3' exonuclease, C-terminal subdomain 11
FAD/NAD(P)-binding domain Nitrite/Sulfite reductase N-terminal domain-like 11
Clc chloride channel CBS-domain pair 11
CheC-like Surface presentation of antigens (SPOA) 11
Multidrug efflux transporter AcrB transmembrane domain HlyD-like secretion proteins 11
PIN domain-like Ribonuclease H-like 11
Glutathione synthetase ATP-binding domain-like Glutathione synthetase ATP-binding domain-like 11
Nucleic acid-binding proteins ArfGap/RecO-like zinc finger 11
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains HlyD-like secretion proteins 11
Trigger factor ribosome-binding domain FKBP-like 11
Probable ACP-binding domain of malonyl-CoA ACP transacylase NAD(P)-binding Rossmann-fold domains 11
Nucleotidyltransferase substrate binding subunit/domain Nucleotidyltransferase substrate binding subunit/domain 11
DNA ligase/mRNA capping enzyme, catalytic domain BRCT domain 11
2Fe-2S ferredoxin-like Nucleotide cyclase 11
Fumarate reductase respiratory complex transmembrane subunits Nucleotide cyclase 11
Dihydropteroate synthetase-like Methionine synthase activation domain-like 11
Cobalamin (vitamin B12)-binding domain Methionine synthase activation domain-like 11
UBA-like Elongation factor Ts (EF-Ts), dimerisation domain 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) FMN-linked oxidoreductases 11
P-loop containing nucleoside triphosphate hydrolases CBS-domain pair 11
Multiheme cytochromes Cytochrome c 11
beta-lactamase/transpeptidase-like Penicillin-binding protein associated domain 11
Rudiment single hybrid motif post-HMGL domain-like 11
PLP-dependent transferases CoA-dependent acyltransferases 11
HAMP domain-like GAF domain-like 11
beta-Barrel protease inhibitors beta-Barrel protease inhibitors 11
Glutathione synthetase ATP-binding domain-like Methylglyoxal synthase-like 11
DNA-glycosylase Nudix 11
Class II aaRS and biotin synthetases Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) 11
Ribonuclease PH domain 2-like Ribonuclease PH domain 2-like 11
alpha/beta-Hydrolases EreA/ChaN-like 11
Prokaryotic type KH domain (KH-domain type II) Prokaryotic type KH domain (KH-domain type II) 11
Trigger factor ribosome-binding domain Triger factor/SurA peptide-binding domain-like 11
S-adenosyl-L-methionine-dependent methyltransferases Galactose-binding domain-like 11
cAMP-binding domain-like FabD/lysophospholipase-like 11
DNA repair protein MutS, domain III P-loop containing nucleoside triphosphate hydrolases 11
FabD/lysophospholipase-like GroES-like 11
cAMP-binding domain-like CBS-domain pair 11
beta-Roll beta-Roll 11
ISP domain FAD/NAD(P)-binding domain 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheW-like 11
FAD/NAD(P)-binding domain Nitrite and sulphite reductase 4Fe-4S domain-like 11
Ribosomal L11/L12e N-terminal domain Ribosomal protein L11, C-terminal domain 11
4Fe-4S ferredoxins ADC-like 11
Formylmethanofuran:tetrahydromethanopterin formyltransferase Formylmethanofuran:tetrahydromethanopterin formyltransferase 11
HCP-like HCP-like 11
N-terminal domain of bifunctional PutA protein FAD-linked oxidoreductase 11
Cryptochrome/photolyase, N-terminal domain Cryptochrome/photolyase FAD-binding domain 11
PGBD-like Trypsin-like serine proteases 11
Chaperone J-domain DnaJ/Hsp40 cysteine-rich domain 11
Phage tail proteins Phage tail proteins 11
Siroheme synthase middle domains-like Tetrapyrrole methylase 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain III 11
RuvA domain 2-like BRCT domain 11
Ribosomal protein S5 domain 2-like HSP90 C-terminal domain 11
MgtE N-terminal domain-like CBS-domain pair 11
Obg GTP-binding protein N-terminal domain P-loop containing nucleoside triphosphate hydrolases 11
FAD-linked oxidoreductase ALDH-like 11
PRTase-like EreA/ChaN-like 11
Rudiment single hybrid motif Aldolase 11
Actin-like ATPase domain HD-domain/PDEase-like 11
Ribokinase-like Nucleotidylyl transferase 11
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 11
Thioesterase/thiol ester dehydrase-isomerase Thioesterase/thiol ester dehydrase-isomerase 11
Mechanosensitive channel protein MscS (YggB), transmembrane region Mechanosensitive channel protein MscS (YggB), C-terminal domain 11
Diaminopimelate epimerase-like Diaminopimelate epimerase-like 11
PurM N-terminal domain-like PurM N-terminal domain-like 11
PreATP-grasp domain Methylglyoxal synthase-like 11
CarD-like TRCF domain-like 11
FAD-binding/transporter-associated domain-like CO dehydrogenase flavoprotein C-terminal domain-like 11
P-loop containing nucleoside triphosphate hydrolases vWA-like 11
UDP-Glycosyltransferase/glycogen phosphorylase S-adenosyl-L-methionine-dependent methyltransferases 11
YlxR-like L30e-like 11
Nucleotidyltransferase substrate binding subunit/domain HD-domain/PDEase-like 11
EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain "Winged helix" DNA-binding domain 11
Nucleic acid-binding proteins PheT/TilS domain 11
Homeodomain-like Methylated DNA-protein cysteine methyltransferase, C-terminal domain 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) ThrRS/AlaRS common domain 11
Homeodomain-like Methylated DNA-protein cysteine methyltransferase domain 11
Tryptophan synthase beta subunit-like PLP-dependent enzymes ACT-like 11
TGS-like ACT-like 11
S13-like H2TH domain Glucocorticoid receptor-like (DNA-binding domain) 11
Bet v1-like Bet v1-like 11
P-loop containing nucleoside triphosphate hydrolases TGS-like 11
GroEL-intermediate domain like GroEL-intermediate domain like 11
Ribosomal protein S5 domain 2-like DNA mismatch repair protein MutL 11
FabD/lysophospholipase-like S-adenosyl-L-methionine-dependent methyltransferases 11
PIN domain-like DNA/RNA polymerases 11
Nucleic acid-binding proteins Prokaryotic type KH domain (KH-domain type II) 11
Prokaryotic type KH domain (KH-domain type II) Rad51 N-terminal domain-like 11
PK beta-barrel domain-like Riboflavin synthase domain-like 11
PH0987 N-terminal domain-like Single hybrid motif 11
cAMP-binding domain-like FAD/NAD(P)-binding domain 11
Cobalamin (vitamin B12)-dependent enzymes Cobalamin (vitamin B12)-binding domain 11
TGS-like Class II aaRS and biotin synthetases 11
P-loop containing nucleoside triphosphate hydrolases C-terminal UvrC-binding domain of UvrB 11
PEP carboxykinase N-terminal domain PEP carboxykinase-like 11
Adenine nucleotide alpha hydrolases-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Adenine nucleotide alpha hydrolases-like Homodimeric domain of signal transducing histidine kinase 11
Methyl-accepting chemotaxis protein (MCP) signaling domain GAF domain-like 11
lambda integrase-like, N-terminal domain DNA breaking-rejoining enzymes 11
ISP domain FAD/NAD-linked reductases, dimerisation (C-terminal) domain 11
DnaJ/Hsp40 cysteine-rich domain HSP40/DnaJ peptide-binding domain 11
Thioesterase/thiol ester dehydrase-isomerase Isocitrate/Isopropylmalate dehydrogenase-like 11
FAD-linked oxidases, C-terminal domain alpha-helical ferredoxin 11
DNA/RNA polymerases Lesion bypass DNA polymerase (Y-family), little finger domain 11
Coiled-coil domain of nucleotide exchange factor GrpE Head domain of nucleotide exchange factor GrpE 11
Class I glutamine amidotransferase-like GMP synthetase C-terminal dimerisation domain 11
YjeF N-terminal domain-like Ribokinase-like 11
5' to 3' exonuclease, C-terminal subdomain Ribonuclease H-like 11
Macro domain-like Zn-dependent exopeptidases 11
Methyl-accepting chemotaxis protein (MCP) signaling domain CheY-like 11
Ribosomal protein L7/12, oligomerisation (N-terminal) domain ClpS-like 11
dsRNA-binding domain-like Ribosomal protein S5 domain 2-like 11
Hsp33 domain HSP33 redox switch-like 11
Nucleic acid-binding proteins Putative DNA-binding domain 11
ACP-like Trimeric LpxA-like enzymes 11
PheT/TilS domain Anticodon-binding domain of PheRS 11
Fe-S cluster assembly (FSCA) domain-like ISP domain 11
Penicillin binding protein dimerisation domain beta-lactamase/transpeptidase-like 11
Thioredoxin-like Nqo1C-terminal domain-like 11
Adenine nucleotide alpha hydrolases-like GAF domain-like 11
NAD(P)-binding Rossmann-fold domains LDH C-terminal domain-like 11
all-alpha NTP pyrophosphatases all-alpha NTP pyrophosphatases 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) PRTase-like 11
P-loop containing nucleoside triphosphate hydrolases Pre-protein crosslinking domain of SecA 11
GAF domain-like Homeodomain-like 11
SufE/NifU Fe-S cluster assembly (FSCA) domain-like 11
Prokaryotic type KH domain (KH-domain type II) Ribosomal protein S3 C-terminal domain 11
Tetrapyrrole methylase S-adenosyl-L-methionine-dependent methyltransferases 11
TGS-like Class II aaRS ABD-related 11
Peptidase/esterase 'gauge' domain alpha/beta-Hydrolases 11
PYP-like sensor domain (PAS domain) Homeodomain-like 11
PHP domain-like AF1531-like 11
Single hybrid motif TK C-terminal domain-like 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
Nucleic acid-binding proteins Rad51 N-terminal domain-like 11
Transcription factor NusA, N-terminal domain Prokaryotic type KH domain (KH-domain type II) 11
Fe,Mn superoxide dismutase (SOD), N-terminal domain Fe,Mn superoxide dismutase (SOD), C-terminal domain 11
lambda repressor-like DNA-binding domains Cyanase C-terminal domain 11
Prokaryotic type I DNA topoisomerase Zinc beta-ribbon 11
(Trans)glycosidases (Trans)glycosidases 11
GAF domain-like Phosphohistidine domain 11
PreATP-grasp domain PH0987 N-terminal domain-like 11
DnaK suppressor protein DksA, alpha-hairpin domain Glucocorticoid receptor-like (DNA-binding domain) 11
Actin-like ATPase domain Heat shock protein 70kD (HSP70), C-terminal subdomain 11
P-loop containing nucleoside triphosphate hydrolases Smc hinge domain 11
Probable ACP-binding domain of malonyl-CoA ACP transacylase PLP-dependent transferases 11
Methylated DNA-protein cysteine methyltransferase domain Methylated DNA-protein cysteine methyltransferase, C-terminal domain 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Alpha subunit of glutamate synthase, C-terminal domain 11
Metal cation-transporting ATPase, ATP-binding domain N Calcium ATPase, transmembrane domain M 11
Calcium ATPase, transduction domain A Metal cation-transporting ATPase, ATP-binding domain N 11
Class II aaRS and biotin synthetases Translation proteins 11
Probable ACP-binding domain of malonyl-CoA ACP transacylase CoA-dependent acyltransferases 11
Lysozyme-like Hedgehog/DD-peptidase 11
PreATP-grasp domain Aldolase 11
PK beta-barrel domain-like Phosphoenolpyruvate/pyruvate domain 11
L9 N-domain-like Ribosomal protein L9 C-domain 11
Homocysteine S-methyltransferase Cobalamin (vitamin B12)-binding domain 11
Voltage-gated potassium channels NAD(P)-binding Rossmann-fold domains 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Nucleotidylyl transferase 11
Cupredoxins Integrin alpha N-terminal domain 11
CBS-domain pair MgtE membrane domain-like 11
Sm-like ribonucleoproteins Mechanosensitive channel protein MscS (YggB), C-terminal domain 11
P-loop containing nucleoside triphosphate hydrolases Dehydroquinate synthase-like 11
Nucleic acid-binding proteins Anticodon-binding domain of PheRS 11
FAD/NAD(P)-binding domain Aminomethyltransferase beta-barrel domain 11
FabD/lysophospholipase-like CoA-dependent acyltransferases 11
Cytochrome c oxidase subunit II-like, transmembrane region Cupredoxins 11
TrmE connector domain P-loop containing nucleoside triphosphate hydrolases 11
Cation efflux protein cytoplasmic domain-like Cation efflux protein cytoplasmic domain-like 11
MgtE N-terminal domain-like MgtE membrane domain-like 11
Methyl-accepting chemotaxis protein (MCP) signaling domain ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
GAF domain-like Phosphoenolpyruvate/pyruvate domain 11
Phage tail proteins Phage fibre proteins 11
Nucleic acid-binding proteins BRCT domain 11
TK C-terminal domain-like 4Fe-4S ferredoxins 11
NAD(P)-binding Rossmann-fold domains ACP-like 11
CheY-like Methylesterase CheB, C-terminal domain 11
Alpha-L RNA-binding motif S-adenosyl-L-methionine-dependent methyltransferases 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) SIS domain 11
NagB/RpiA/CoA transferase-like alpha-helical ferredoxin 11
Ribonuclease PH domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
Caspase-like C-type lectin-like 11
Aminoacid dehydrogenase-like, N-terminal domain Isocitrate/Isopropylmalate dehydrogenase-like 11
Dihydropteroate synthetase-like Methionine synthase domain 11
Homocysteine S-methyltransferase Dihydropteroate synthetase-like 11
FabD/lysophospholipase-like Acetyl-CoA synthetase-like 11
Fumarate reductase respiratory complex transmembrane subunits 2Fe-2S ferredoxin-like 11
Single hybrid motif Thiamin diphosphate-binding fold (THDP-binding) 11
"Winged helix" DNA-binding domain LexA/Signal peptidase 11
Thiolase-like PLP-dependent transferases 11
Ribosomal protein S5 domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
NAD(P)-binding Rossmann-fold domains UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 11
Sigma3 and sigma4 domains of RNA polymerase sigma factors TPR-like 11
Carbon-nitrogen hydrolase Adenine nucleotide alpha hydrolases-like 11
Translation initiation factor IF3, N-terminal domain Translation initiation factor IF3, C-terminal domain 11
Thiamin diphosphate-binding fold (THDP-binding) 4Fe-4S ferredoxins 11
Translation proteins PRC-barrel domain 11
2Fe-2S ferredoxin-like ADC-like 11
Tex N-terminal region-like RuvA domain 2-like 11
HRDC-like HRDC-like 11
PLP-dependent transferases Ornithine decarboxylase C-terminal domain 11
Eukaryotic type KH-domain (KH-domain type I) Nucleic acid-binding proteins 11
Glutathione synthetase ATP-binding domain-like Cyclophilin-like 11
DNA topoisomerase I domain DNA breaking-rejoining enzymes 11
N-utilization substance G protein NusG, N-terminal domain Translation proteins SH3-like domain 11
P-loop containing nucleoside triphosphate hydrolases RecA protein, C-terminal domain 11
Cyclophilin-like Single hybrid motif 11
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphoenolpyruvate/pyruvate domain 11
P-loop containing nucleoside triphosphate hydrolases CarD-like 11
Glutathione synthetase ATP-binding domain-like PH0987 N-terminal domain-like 11
ThrRS/AlaRS common domain Class II aaRS ABD-related 11
Zinc beta-ribbon DNA primase core 11
Pre-protein crosslinking domain of SecA Helical scaffold and wing domains of SecA 11
Tex N-terminal region-like Nucleic acid-binding proteins 11
RmlC-like cupins RmlC-like cupins 11
P-loop containing nucleoside triphosphate hydrolases Pentapeptide repeat-like 11
Class II aaRS and biotin synthetases Anticodon-binding domain of PheRS 11
Aconitase iron-sulfur domain LeuD/IlvD-like 11
HAMP domain-like PYP-like sensor domain (PAS domain) 11
Phage tail proteins gp5 N-terminal domain-like 11
N-terminal domain of DnaB helicase P-loop containing nucleoside triphosphate hydrolases 11
Metal cation-transporting ATPase, ATP-binding domain N HAD-like 11
PheT/TilS domain Class II aaRS and biotin synthetases 11
TGS-like ThrRS/AlaRS common domain 11
PheT/TilS domain Putative DNA-binding domain 11
P-loop containing nucleoside triphosphate hydrolases HRDC-like 11
GAF domain-like Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain 11
N-terminal domain of MutM-like DNA repair proteins Glucocorticoid receptor-like (DNA-binding domain) 11
P-loop containing nucleoside triphosphate hydrolases TRCF domain-like 11
Carbamoyl phosphate synthetase, large subunit connection domain Methylglyoxal synthase-like 11
ACP-like ACP-like 11
Insert subdomain of RNA polymerase alpha subunit RBP11-like subunits of RNA polymerase 11
FAD-linked reductases, C-terminal domain 4Fe-4S ferredoxins 11
Thiolase-like NAD(P)-binding Rossmann-fold domains 11
GIY-YIG endonuclease C-terminal UvrC-binding domain of UvrB 11
Carbamate kinase-like PUA domain-like 11
alpha-helical ferredoxin 4Fe-4S ferredoxins 11
PDZ domain-like ClpP/crotonase 11
Actin-like ATPase domain Heat shock protein 70kD (HSP70), peptide-binding domain 11
NAD(P)-binding Rossmann-fold domains 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
Carbamate kinase-like ACT-like 11
Nicotinate/Quinolinate PRTase N-terminal domain-like Nicotinate/Quinolinate PRTase C-terminal domain-like 11
P-loop containing nucleoside triphosphate hydrolases TrpR-like 11
Probable ACP-binding domain of malonyl-CoA ACP transacylase S-adenosyl-L-methionine-dependent methyltransferases 11
C-terminal effector domain of the bipartite response regulators TPR-like 11
4'-phosphopantetheinyl transferase 4'-phosphopantetheinyl transferase 11
Probable ACP-binding domain of malonyl-CoA ACP transacylase Acetyl-CoA synthetase-like 11
Nucleotidyltransferase Poly A polymerase C-terminal region-like 11
RuvA domain 2-like RuvA domain 2-like 11
C-terminal effector domain of the bipartite response regulators HCP-like 11

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