SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.


Domain combination pairs in Populus trichocarpa v156

All pairs of domain combinations at the superfamily level are listed here.
The identification of domain pairs does not account for the possibility of non-contiguous domains. Inserted, or interlaced, domains are seen as having a simple pair ordering.

  • For a list of unique full length architectures for this genome click here (can be slow).
Adjacent domain pairs graph

Graph of adjacent domain pairs.


Add or remove domain pairs

The links below permit the addition or removal of specific sets of domain combination pairs.


Jump to [ Top of page · Add/remove domain pairs · Domain combination pairs ]

Add or remove genomes

Change the list of genome two-letter codes in the 'Include genomes' box to include domain-pairs from those genomes.
Change the list of genomes in the 'Exclude genomes' box to exclude domain-pairs from those genomes.
List of all two-letter genome codes.

Add or remove genomes:
Include genomes:
Exclude genomes:


Jump to [ Top of page · Add/remove domain pairs · Add/remove genomes ]

Domain combination pairs

1459 domain combination pairs.
Click on a column heading to sort that column, or the 'View' button to see domain architetures for that domain pair combination.

Superfamily (N) Superfamily (C) Number of occurrances Number unique
P-loop containing nucleoside triphosphate hydrolases L domain-like 43290
L domain-like Protein kinase-like (PK-like) 42341
L domain-like L domain-like 33288
P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases 25657
alpha-D-mannose-specific plant lectins Protein kinase-like (PK-like) 20019
L domain-like RNI-like 19671
RNA-binding domain, RBD RNA-binding domain, RBD 14024
Toll/Interleukin receptor TIR domain P-loop containing nucleoside triphosphate hydrolases 11544
Toll/Interleukin receptor TIR domain L domain-like 9845
RNI-like Protein kinase-like (PK-like) 9525
TPR-like TPR-like 9024
Calcium ATPase, transduction domain A Calcium ATPase, transmembrane domain M 8615
GroES-like NAD(P)-binding Rossmann-fold domains 867
RING/U-box ARM repeat 8611
Thioredoxin-like GST C-terminal domain-like 866
HAD-like Calcium ATPase, transmembrane domain M 8515
Cupredoxins Cupredoxins 847
P-loop containing nucleoside triphosphate hydrolases "Winged helix" DNA-binding domain 8334
Calcium ATPase, transduction domain A HAD-like 8213
P-loop containing nucleoside triphosphate hydrolases ABC transporter transmembrane region 8114
Actin-like ATPase domain Actin-like ATPase domain 7917
ARM repeat ARM repeat 7937
"Winged helix" DNA-binding domain L domain-like 7430
F-box domain RNI-like 7410
P-loop containing nucleoside triphosphate hydrolases RNI-like 6933
Terpenoid cyclases/Protein prenyltransferases Terpenoid synthases 625
ABC transporter transmembrane region ABC transporter transmembrane region 608
Plant invertase/pectin methylesterase inhibitor Pectin lyase-like 572
Cyclin-like Cyclin-like 576
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain NAD(P)-binding Rossmann-fold domains 568
Thiolase-like Thiolase-like 562
Toll/Interleukin receptor TIR domain "Winged helix" DNA-binding domain 5523
RNI-like RNI-like 5429
Periplasmic binding protein-like I Periplasmic binding protein-like II 544
Metal cation-transporting ATPase, ATP-binding domain N HAD-like 536
Metal cation-transporting ATPase, ATP-binding domain N Calcium ATPase, transmembrane domain M 536
Multidrug resistance efflux transporter EmrE Multidrug resistance efflux transporter EmrE 536
Concanavalin A-like lectins/glucanases Protein kinase-like (PK-like) 525
Calcium ATPase, transduction domain A Metal cation-transporting ATPase, ATP-binding domain N 525
CRAL/TRIO N-terminal domain CRAL/TRIO domain 509
Eukaryotic type KH-domain (KH-domain type I) Eukaryotic type KH-domain (KH-domain type I) 4712
C2 domain (Calcium/lipid-binding domain, CaLB) C2 domain (Calcium/lipid-binding domain, CaLB) 476
FAD-linked reductases, C-terminal domain FAD/NAD(P)-binding domain 4612
P-loop containing nucleoside triphosphate hydrolases Translation proteins 4516
Homeodomain-like Homeodomain-like 4411
S-adenosyl-L-methionine-dependent methyltransferases S-adenosyl-L-methionine-dependent methyltransferases 445
Protein kinase-like (PK-like) EF-hand 423
Ubiquitin-like Ubiquitin-like 406
Barwin-like endoglucanases PHL pollen allergen 391
RING/U-box RING/U-box 3915
F-box domain Kelch motif 375
Galactose-binding domain-like (Trans)glycosidases 3710
ACT-like ACT-like 3711
FAD/NAD(P)-binding domain FAD/NAD(P)-binding domain 377
DNA-binding pseudobarrel domain CAD & PB1 domains 362
Riboflavin synthase domain-like Ferredoxin reductase-like, C-terminal NADP-linked domain 369
Tubulin nucleotide-binding domain-like Tubulin C-terminal domain-like 363
HSP40/DnaJ peptide-binding domain HSP40/DnaJ peptide-binding domain 3610
beta-beta-alpha zinc fingers beta-beta-alpha zinc fingers 3612
"Winged helix" DNA-binding domain S-adenosyl-L-methionine-dependent methyltransferases 361
(Trans)glycosidases Glycosyl hydrolase domain 3410
NAD(P)-binding Rossmann-fold domains 6-phosphogluconate dehydrogenase C-terminal domain-like 349
ENTH/VHS domain GAT-like domain 333
GroEL equatorial domain-like GroEL apical domain-like 3310
Thioredoxin-like Thioredoxin-like 3314
CCCH zinc finger CCCH zinc finger 3317
GroEL-intermediate domain like GroEL apical domain-like 328
Voltage-gated potassium channels cAMP-binding domain-like 315
DNA-binding domain DNA-binding domain 302
Cysteine-rich domain Cysteine-rich domain 2919
GroEL equatorial domain-like GroEL-intermediate domain like 296
Actin-like ATPase domain Heat shock protein 70kD (HSP70), peptide-binding domain 298
beta-beta-alpha zinc fingers Ribonuclease H-like 297
RING/U-box Nucleotide-diphospho-sugar transferases 292
Purple acid phosphatase, N-terminal domain Metallo-dependent phosphatases 283
WRKY DNA-binding domain WRKY DNA-binding domain 284
alpha-D-mannose-specific plant lectins alpha-D-mannose-specific plant lectins 286
Ypt/Rab-GAP domain of gyp1p Ypt/Rab-GAP domain of gyp1p 284
Formate/glycerate dehydrogenase catalytic domain-like NAD(P)-binding Rossmann-fold domains 286
F-box domain Galactose oxidase, central domain 285
Ubiquitin-like UBA-like 288
GroES-like GroES-like 283
Chaperone J-domain HSP40/DnaJ peptide-binding domain 277
Aminoacid dehydrogenase-like, N-terminal domain NAD(P)-binding Rossmann-fold domains 275
Homodimeric domain of signal transducing histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 277
Homeodomain-like Bet v1-like 265
CheY-like Homeodomain-like 265
RING/U-box P-loop containing nucleoside triphosphate hydrolases 2510
P-loop containing nucleoside triphosphate hydrolases EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 254
WD40 repeat-like WD40 repeat-like 2515
Translation proteins EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 254
PK beta-barrel domain-like Phosphoenolpyruvate/pyruvate domain 253
(Trans)glycosidases Beta-D-glucan exohydrolase, C-terminal domain 252
Phosphoenolpyruvate/pyruvate domain PK C-terminal domain-like 253
PK beta-barrel domain-like PK C-terminal domain-like 242
Hermes dimerisation domain Ribonuclease H-like 2411
Actin-like ATPase domain Heat shock protein 70kD (HSP70), C-terminal subdomain 245
Lipase/lipooxygenase domain (PLAT/LH2 domain) Lipoxigenase 232
Double Clp-N motif P-loop containing nucleoside triphosphate hydrolases 236
Terpenoid cyclases/Protein prenyltransferases Terpenoid cyclases/Protein prenyltransferases 235
Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) 225
Heat shock protein 70kD (HSP70), peptide-binding domain Heat shock protein 70kD (HSP70), C-terminal subdomain 224
Galactose-binding domain-like Galactose-binding domain-like 224
Nucleic acid-binding proteins Nucleic acid-binding proteins 2217
HMA, heavy metal-associated domain HMA, heavy metal-associated domain 228
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Ribosomal protein S5 domain 2-like 2210
FYVE/PHD zinc finger FYVE/PHD zinc finger 228
Homodimeric domain of signal transducing histidine kinase CheY-like 214
Adenine nucleotide alpha hydrolases-like Protein kinase-like (PK-like) 213
EF-hand EF-hand 216
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheY-like 214
Bet v1-like Bet v1-like 216
PreATP-grasp domain Glutathione synthetase ATP-binding domain-like 219
SNARE-like SNARE fusion complex 202
Cation efflux protein transmembrane domain-like Cation efflux protein cytoplasmic domain-like 204
ARM repeat Protein kinase-like (PK-like) 2017
NAD(P)-binding Rossmann-fold domains LDH C-terminal domain-like 201
Glucocorticoid receptor-like (DNA-binding domain) Glucocorticoid receptor-like (DNA-binding domain) 204
Phospholipase D/nuclease Phospholipase D/nuclease 2010
dsRNA-binding domain-like dsRNA-binding domain-like 199
Nucleotidylyl transferase Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 199
RNA-binding domain, RBD Retrovirus zinc finger-like domains 195
UROD/MetE-like UROD/MetE-like 192
Ribosomal protein S5 domain 2-like Ribonuclease PH domain 2-like 188
P-loop containing nucleoside triphosphate hydrolases FtsH protease domain-like 183
Ribosomal protein S5 domain 2-like GHMP Kinase, C-terminal domain 184
Plant lectins/antimicrobial peptides Lysozyme-like 182
Subtilisin-like PA domain 183
Trypsin-like serine proteases PDZ domain-like 187
Zn-dependent exopeptidases Bacterial exopeptidase dimerisation domain 183
FAS1 domain FAS1 domain 185
TRAF domain-like TRAF domain-like 174
Retrovirus zinc finger-like domains Retrovirus zinc finger-like domains 1710
Nucleic acid-binding proteins P-loop containing nucleoside triphosphate hydrolases 176
Nucleotidyltransferase PAP/OAS1 substrate-binding domain 176
Thioesterase/thiol ester dehydrase-isomerase Thioesterase/thiol ester dehydrase-isomerase 174
P-loop containing nucleoside triphosphate hydrolases post-AAA+ oligomerization domain-like 175
Glucocorticoid receptor-like (DNA-binding domain) AN1-like Zinc finger 172
Ran binding protein zinc finger-like Ran binding protein zinc finger-like 177
Protein kinase-like (PK-like) TPR-like 173
PGBD-like Metalloproteases ("zincins"), catalytic domain 172
P-loop containing nucleoside triphosphate hydrolases EF-G C-terminal domain-like 1711
UDP-Glycosyltransferase/glycogen phosphorylase HAD-like 162
vWA-like RING/U-box 164
Thiamin diphosphate-binding fold (THDP-binding) TK C-terminal domain-like 163
PAZ domain Ribonuclease H-like 163
CBS-domain pair CBS-domain pair 166
DnaJ/Hsp40 cysteine-rich domain HSP40/DnaJ peptide-binding domain 156
Glutathione synthetase ATP-binding domain-like Rudiment single hybrid motif 156
Translation proteins EF-G C-terminal domain-like 159
HCP-like TPR-like 158
Ankyrin repeat RING/U-box 154
beta-sandwich domain of Sec23/24 Helical domain of Sec23/24 155
ISP domain Bet v1-like 153
ARM repeat WD40 repeat-like 159
P-loop containing nucleoside triphosphate hydrolases Ribosomal protein S5 domain 2-like 1510
vWA-like Helical domain of Sec23/24 155
RING/U-box WD40 repeat-like 158
vWA-like beta-sandwich domain of Sec23/24 155
RING/U-box TRAF domain-like 143
Sigma2 domain of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 146
UBA-like UBA-like 144
Zn-finger domain of Sec23/24 Helical domain of Sec23/24 144
POZ domain Skp1 dimerisation domain-like 142
Chaperone J-domain DnaJ/Hsp40 cysteine-rich domain 145
PreATP-grasp domain Rudiment single hybrid motif 145
Zn-finger domain of Sec23/24 beta-sandwich domain of Sec23/24 144
Zn-finger domain of Sec23/24 vWA-like 144
Cryptochrome/photolyase, N-terminal domain Cryptochrome/photolyase FAD-binding domain 144
RCC1/BLIP-II RCC1/BLIP-II 145
TRAF domain-like POZ domain 143
CAD & PB1 domains Protein kinase-like (PK-like) 131
Nucleic acid-binding proteins Class II aaRS and biotin synthetases 135
P-loop containing nucleoside triphosphate hydrolases Ankyrin repeat 134
Clc chloride channel CBS-domain pair 135
HMA, heavy metal-associated domain Calcium ATPase, transmembrane domain M 137
DNA-binding pseudobarrel domain DNA-binding pseudobarrel domain 135
Ankyrin repeat Ankyrin repeat 133
HMA, heavy metal-associated domain Calcium ATPase, transduction domain A 137
Protein kinase-like (PK-like) WD40 repeat-like 135
Helical domain of Sec23/24 C-terminal, gelsolin-like domain of Sec23/24 134
GAF domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 135
Protein kinase-like (PK-like) RING/U-box 135
FAD-binding/transporter-associated domain-like FAD-linked oxidases, C-terminal domain 132
vWA-like C-terminal, gelsolin-like domain of Sec23/24 134
F-box domain Tubby C-terminal domain-like 132
Acyl-CoA dehydrogenase NM domain-like Acyl-CoA dehydrogenase C-terminal domain-like 135
Single hybrid motif CoA-dependent acyltransferases 135
Class II aaRS and biotin synthetases Class II aaRS ABD-related 136
beta-sandwich domain of Sec23/24 C-terminal, gelsolin-like domain of Sec23/24 134
HMA, heavy metal-associated domain HAD-like 137
GAF domain-like Homodimeric domain of signal transducing histidine kinase 135
Voltage-gated potassium channels Voltage-gated potassium channels 134
Thioredoxin-like Cysteine-rich domain 123
Glutamine synthetase, N-terminal domain Glutamine synthetase/guanido kinase 123
Protein kinase-like (PK-like) Protein kinase-like (PK-like) 1210
EF-G C-terminal domain-like EF-G C-terminal domain-like 127
LuxS/MPP-like metallohydrolase LuxS/MPP-like metallohydrolase 124
Protein kinase-like (PK-like) Ankyrin repeat 123
Galactose mutarotase-like Galactose-binding domain-like 123
C2 domain (Calcium/lipid-binding domain, CaLB) Phospholipase D/nuclease 125
(Phosphotyrosine protein) phosphatases II C2 domain (Calcium/lipid-binding domain, CaLB) 123
Zn-finger domain of Sec23/24 C-terminal, gelsolin-like domain of Sec23/24 123
FYVE/PHD zinc finger P-loop containing nucleoside triphosphate hydrolases 127
P-loop containing nucleoside triphosphate hydrolases E set domains 124
ValRS/IleRS/LeuRS editing domain Nucleotidylyl transferase 114
Nucleotide-diphospho-sugar transferases Trimeric LpxA-like enzymes 113
Ribosomal protein S5 domain 2-like HSP90 C-terminal domain 114
FYVE/PHD zinc finger SET domain 115
F-box domain L domain-like 115
Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain SAICAR synthase-like 115
ValRS/IleRS/LeuRS editing domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 114
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase HSP90 C-terminal domain 114
Cullin homology domain "Winged helix" DNA-binding domain 113
Thiamin diphosphate-binding fold (THDP-binding) DHS-like NAD/FAD-binding domain 113
Galactose mutarotase-like (Trans)glycosidases 115
Starch-binding domain-like Galactose-binding domain-like 113
Transducin (alpha subunit), insertion domain P-loop containing nucleoside triphosphate hydrolases 102
Cullin repeat-like Cullin homology domain 103
Galactose mutarotase-like Starch-binding domain-like 102
PYP-like sensor domain (PAS domain) PYP-like sensor domain (PAS domain) 107
EF-G C-terminal domain-like Ribosomal protein S5 domain 2-like 107
Amine oxidase N-terminal region Amine oxidase N-terminal region 103
Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 103
Single hybrid motif Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 104
ACT-like Protein kinase-like (PK-like) 101
EF-hand Ferredoxin reductase-like, C-terminal NADP-linked domain 101
ARM repeat Hect, E3 ligase catalytic domain 104
E set domains (Trans)glycosidases 105
UBA-like XPC-binding domain 102
FYVE/PHD zinc finger RING/U-box 106
WD40 repeat-like Quinoprotein alcohol dehydrogenase-like 109
Calponin-homology domain, CH-domain P-loop containing nucleoside triphosphate hydrolases 102
DNA repair protein MutS, domain III P-loop containing nucleoside triphosphate hydrolases 108
NTF2-like RNA-binding domain, RBD 102
Galactose oxidase, central domain E set domains 102
Ubiquitin-like XPC-binding domain 102
Surp module (SWAP domain) Surp module (SWAP domain) 103
FAD/NAD(P)-binding domain FAD/NAD-linked reductases, dimerisation (C-terminal) domain 104
EF-hand Riboflavin synthase domain-like 101
PH domain-like Oxysterol-binding protein-like 102
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex CoA-dependent acyltransferases 104
Actin depolymerizing proteins Actin depolymerizing proteins 95
FKBP-like TPR-like 92
FYVE/PHD zinc finger Homeodomain-like 93
Cdc48 domain 2-like P-loop containing nucleoside triphosphate hydrolases 92
"Winged helix" DNA-binding domain RNA-binding domain, RBD 92
Translation proteins SH3-like domain Nucleic acid-binding proteins 94
Zinc hairpin stack RING/U-box 92
Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 95
C2 domain (Calcium/lipid-binding domain, CaLB) Formin homology 2 domain (FH2 domain) 91
C2 domain (Calcium/lipid-binding domain, CaLB) EF-hand 92
F1F0 ATP synthase subunit C F1F0 ATP synthase subunit C 92
EF-hand Voltage-gated potassium channels 93
CHY zinc finger-like RING/U-box 92
Thioredoxin-like Ubiquitin-like 93
CCCH zinc finger RNA-binding domain, RBD 93
RING/U-box Cysteine proteinases 95
P-loop containing nucleoside triphosphate hydrolases dsRNA-binding domain-like 96
CHY zinc finger-like Zinc hairpin stack 92
POZ domain TPR-like 94
(Phosphotyrosine protein) phosphatases II Formin homology 2 domain (FH2 domain) 91
PIN domain-like 5' to 3' exonuclease, C-terminal subdomain 95
CheY-like CheY-like 92
RCC1/BLIP-II FYVE/PHD zinc finger 93
ADC-like Cdc48 domain 2-like 92
PAH2 domain PAH2 domain 96
Homeodomain-like FAD/NAD(P)-binding domain 95
SNARE-like Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor 93
YhbY-like YhbY-like 94
RCC1/BLIP-II Protein kinase-like (PK-like) 95
EGF/Laminin Protein kinase-like (PK-like) 93
Concanavalin A-like lectins/glucanases P-domain of calnexin/calreticulin 91
Cullin repeat-like "Winged helix" DNA-binding domain 92
t-snare proteins SNARE fusion complex 92
HCP-like HCP-like 94
E set domains Ankyrin repeat 92
Translation proteins Ribosomal protein S5 domain 2-like 96
Aldolase NAD(P)-binding Rossmann-fold domains 92
POZ domain Ankyrin repeat 95
ADC-like P-loop containing nucleoside triphosphate hydrolases 92
PH domain-like FYVE/PHD zinc finger 93
TPR-like Thioredoxin-like 93
PUA domain-like SET domain 92
S-adenosylmethionine synthetase S-adenosylmethionine synthetase 91
PDZ domain-like ClpP/crotonase 82
Galactose mutarotase-like Glycosyl hydrolase domain 83
SWIB/MDM2 domain Plus3-like 88
cAMP-binding domain-like Ankyrin repeat 82
Amine oxidase N-terminal region Amine oxidase catalytic domain 82
POZ domain TAZ domain 82
E set domains Glycosyl hydrolase domain 83
Protease propeptides/inhibitors Subtilisin-like 83
Nitrite/Sulfite reductase N-terminal domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 82
SET domain RuBisCo LSMT C-terminal, substrate-binding domain 82
Voltage-gated potassium channels Ankyrin repeat 82
Leukotriene A4 hydrolase N-terminal domain Metalloproteases ("zincins"), catalytic domain 84
BRCT domain BRCT domain 86
Ubiquitin-like Homeodomain-like 81
(Trans)glycosidases Chitinase insertion domain 83
P-loop containing nucleoside triphosphate hydrolases Smc hinge domain 85
TPR-like Chaperone J-domain 84
Chromo domain-like Chromo domain-like 84
ARM repeat Tudor/PWWP/MBT 81
RING/U-box RNA-binding domain, RBD 83
NagB/RpiA/CoA transferase-like D-ribose-5-phosphate isomerase (RpiA), lid domain 83
Phosphoglucomutase, first 3 domains Phosphoglucomutase, first 3 domains 85
ENT-like Tudor/PWWP/MBT 82
Homeodomain-like FAD-linked reductases, C-terminal domain 84
P-loop containing nucleoside triphosphate hydrolases ARM repeat 84
Surp module (SWAP domain) Ubiquitin-like 81
Translational machinery components L30e-like 82
DPP6 N-terminal domain-like alpha/beta-Hydrolases 82
Ribosomal protein L6 Ribosomal protein L6 82
PH domain-like RCC1/BLIP-II 82
HLH, helix-loop-helix DNA-binding domain ACT-like 82
Ubiquitin-like Zn-binding ribosomal proteins 81
Arabinanase/levansucrase/invertase Concanavalin A-like lectins/glucanases 82
CRAL/TRIO domain Supernatant protein factor (SPF), C-terminal domain 83
CRAL/TRIO N-terminal domain Supernatant protein factor (SPF), C-terminal domain 83
Sec7 domain ARM repeat 85
ARM repeat Clathrin adaptor appendage domain 84
Aldolase Aminoacid dehydrogenase-like, N-terminal domain 81
P-loop containing nucleoside triphosphate hydrolases TGS-like 83
NAD(P)-binding Rossmann-fold domains ACT-like 83
Growth factor receptor domain Protein kinase-like (PK-like) 82
FYVE/PHD zinc finger Acyl-CoA N-acyltransferases (Nat) 83
Hypothetical protein c14orf129, hspc210 TPR-like 82
2Fe-2S ferredoxin-like FAD-binding/transporter-associated domain-like 71
PH domain-like BEACH domain 74
Translation initiation factor 2 beta, aIF2beta, N-terminal domain Zinc-binding domain of translation initiation factor 2 beta 73
CO dehydrogenase molybdoprotein N-domain-like Molybdenum cofactor-binding domain 71
Tudor/PWWP/MBT FYVE/PHD zinc finger 73
Acid proteases Saposin 72
RNase III domain-like dsRNA-binding domain-like 77
Rudiment single hybrid motif Single hybrid motif 72
Cysteine proteinases Granulin repeat 73
"Winged helix" DNA-binding domain "Winged helix" DNA-binding domain 75
2Fe-2S ferredoxin-like CO dehydrogenase ISP C-domain like 71
2Fe-2S ferredoxin-like CO dehydrogenase molybdoprotein N-domain-like 71
Domain of the SRP/SRP receptor G-proteins P-loop containing nucleoside triphosphate hydrolases 73
Peptidase/esterase 'gauge' domain alpha/beta-Hydrolases 72
Glycoside hydrolase/deacetylase Galactose mutarotase-like 74
Coiled-coil domain of nucleotide exchange factor GrpE Head domain of nucleotide exchange factor GrpE 72
Flavoproteins Riboflavin synthase domain-like 74
EF-hand PLC-like phosphodiesterases 71
CO dehydrogenase ISP C-domain like CO dehydrogenase molybdoprotein N-domain-like 71
CO dehydrogenase flavoprotein C-terminal domain-like CO dehydrogenase molybdoprotein N-domain-like 71
Enolase N-terminal domain-like Enolase C-terminal domain-like 73
Ubiquitin-like BAG domain 72
"Winged helix" DNA-binding domain E2F-DP heterodimerization region 73
Composite domain of metallo-dependent hydrolases Metallo-dependent hydrolases 73
Glutathione synthetase ATP-binding domain-like Single hybrid motif 72
Chromo domain-like P-loop containing nucleoside triphosphate hydrolases 73
P-loop containing nucleoside triphosphate hydrolases Homeodomain-like 72
P-loop containing nucleoside triphosphate hydrolases Signal peptide-binding domain 72
CO dehydrogenase ISP C-domain like Molybdenum cofactor-binding domain 71
FAD-binding/transporter-associated domain-like CO dehydrogenase molybdoprotein N-domain-like 71
CO dehydrogenase ISP C-domain like CO dehydrogenase flavoprotein C-terminal domain-like 71
PLC-like phosphodiesterases C2 domain (Calcium/lipid-binding domain, CaLB) 71
Tudor/PWWP/MBT SET domain 73
Adenine nucleotide alpha hydrolases-like RING/U-box 71
Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain 71
FAD-binding/transporter-associated domain-like CO dehydrogenase flavoprotein C-terminal domain-like 71
Glycoside hydrolase/deacetylase Families 57/38 glycoside transferase middle domain 74
RNase III domain-like RNase III domain-like 76
FAD-binding/transporter-associated domain-like Molybdenum cofactor-binding domain 71
2Fe-2S ferredoxin-like CO dehydrogenase flavoprotein C-terminal domain-like 71
BEACH domain WD40 repeat-like 74
PreATP-grasp domain Single hybrid motif 72
Families 57/38 glycoside transferase middle domain Galactose mutarotase-like 74
2Fe-2S ferredoxin-like Molybdenum cofactor-binding domain 71
dsRNA-binding domain-like Ribosomal protein S5 domain 2-like 72
CO dehydrogenase flavoprotein C-terminal domain-like Molybdenum cofactor-binding domain 71
Nitrite and sulphite reductase 4Fe-4S domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 71
Chaperone J-domain 4Fe-4S ferredoxins 72
CO dehydrogenase ISP C-domain like FAD-binding/transporter-associated domain-like 71
Nucleic acid-binding proteins Retrovirus zinc finger-like domains 73
Ribonuclease H-like DNA/RNA polymerases 73
Nitrite/Sulfite reductase N-terminal domain-like Nitrite/Sulfite reductase N-terminal domain-like 71
P-loop containing nucleoside triphosphate hydrolases PH domain-like 73
FKBP-like FKBP-like 61
PH domain-like Bet v1-like 62
BAR/IMD domain-like SH3-domain 61
TPR-like RING/U-box 64
F-box domain HCP-like 64
ARM repeat PH domain-like 63
Rap30/74 interaction domains "Winged helix" DNA-binding domain 62
P-loop containing nucleoside triphosphate hydrolases CYTH-like phosphatases 64
ARM repeat Subdomain of clathrin and coatomer appendage domain 63
ArfGap/RecO-like zinc finger C2 domain (Calcium/lipid-binding domain, CaLB) 63
beta-beta-alpha zinc fingers Hermes dimerisation domain 63
Toll/Interleukin receptor TIR domain RNI-like 65
MFS general substrate transporter MFS general substrate transporter 63
MIT domain P-loop containing nucleoside triphosphate hydrolases 62
HIT/MYND zinc finger-like Cysteine proteinases 62
L9 N-domain-like Ribosomal protein L9 C-domain 61
Acyl-CoA dehydrogenase C-terminal domain-like Acyl-CoA dehydrogenase C-terminal domain-like 62
RNA-binding domain, RBD Ran binding protein zinc finger-like 64
PYP-like sensor domain (PAS domain) Protein kinase-like (PK-like) 64
Formate/glycerate dehydrogenase catalytic domain-like Serine metabolism enzymes domain 62
P-loop containing nucleoside triphosphate hydrolases Class I glutamine amidotransferase-like 62
WW domain WW domain 65
N-terminal nucleophile aminohydrolases (Ntn hydrolases) FMN-linked oxidoreductases 64
Fe-S cluster assembly (FSCA) domain-like Fe-S cluster assembly (FSCA) domain-like 61
MurD-like peptide ligases, catalytic domain MurD-like peptide ligases, peptide-binding domain 64
UBA-like RING/U-box 63
NAD-binding domain of HMG-CoA reductase Substrate-binding domain of HMG-CoA reductase 61
Formate/glycerate dehydrogenase catalytic domain-like ACT-like 62
Cytochrome P450 Cytochrome P450 63
Homeodomain-like "Winged helix" DNA-binding domain 61
GAF domain-like CheY-like 61
Glutathione synthetase ATP-binding domain-like Succinyl-CoA synthetase domains 61
PLP-dependent transferases Ornithine decarboxylase C-terminal domain 62
Arp2/3 complex subunits Arp2/3 complex subunits 62
Actin depolymerizing proteins VHP, Villin headpiece domain 62
NSFL1 (p97 ATPase) cofactor p47, SEP domain Ubiquitin-like 62
EF-hand P-loop containing nucleoside triphosphate hydrolases 63
Formate/glycerate dehydrogenase catalytic domain-like Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 61
Ribosomal L11/L12e N-terminal domain Ribosomal protein L11, C-terminal domain 62
Phosphoglucomutase, first 3 domains Phosphoglucomutase, C-terminal domain 64
NAD(P)-binding Rossmann-fold domains Serine metabolism enzymes domain 62
GroEL apical domain-like SAICAR synthase-like 63
DUSP-like Cysteine proteinases 64
RNA-binding domain, RBD PABC (PABP) domain 63
Toll/Interleukin receptor TIR domain Toll/Interleukin receptor TIR domain 66
Class I glutamine amidotransferase-like Class I glutamine amidotransferase-like 62
Ubiquitin-like Cysteine proteinases 66
TPR-like CAD & PB1 domains 63
Calponin-homology domain, CH-domain EB1 dimerisation domain-like 62
N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 L30e-like 61
Fe,Mn superoxide dismutase (SOD), N-terminal domain Fe,Mn superoxide dismutase (SOD), C-terminal domain 63
P-loop containing nucleoside triphosphate hydrolases PRTase-like 61
RING/U-box Homeodomain-like 63
LysM domain LysM domain 62
DEK C-terminal domain SWIB/MDM2 domain 64
Clathrin adaptor appendage domain Subdomain of clathrin and coatomer appendage domain 63
(Trans)glycosidases Ricin B-like lectins 63
RING/U-box PUA domain-like 64
GST C-terminal domain-like eEF-1beta-like 62
HAD-like Riboflavin kinase-like 61
N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 Translational machinery components 61
ClpP/crotonase ClpP/crotonase 63
Protein kinase-like (PK-like) KA1-like 62
Serine metabolism enzymes domain ACT-like 62
Eukaryotic type KH-domain (KH-domain type I) Nucleic acid-binding proteins 64
PH domain-like WD40 repeat-like 63
HD-domain/PDEase-like Nucleotidyltransferase 64
P-loop containing nucleoside triphosphate hydrolases Retrovirus zinc finger-like domains 53
Initiation factor IF2/eIF5b, domain 3 Translation proteins 53
NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains 53
ARM repeat UBA-like 52
P-loop containing nucleoside triphosphate hydrolases C-terminal domain of alpha and beta subunits of F1 ATP synthase 53
PYP-like sensor domain (PAS domain) Homodimeric domain of signal transducing histidine kinase 53
P-loop containing nucleoside triphosphate hydrolases Sec63 N-terminal domain-like 54
DNA/RNA polymerases Lesion bypass DNA polymerase (Y-family), little finger domain 53
FYVE/PHD zinc finger Transducin (alpha subunit), insertion domain 51
Translation proteins Translation proteins 53
ARM repeat POZ domain 52
Nucleotidylyl transferase Nucleotidylyl transferase 51
HAND domain of the nucleosome remodeling ATPase ISWI Homeodomain-like 51
CBS-domain pair CAD & PB1 domains 51
Protein kinase-like (PK-like) beta-lactamase/transpeptidase-like 51
Actin-crosslinking proteins (Trans)glycosidases 51
LysM domain Protein kinase-like (PK-like) 52
Class II aaRS and biotin synthetases C-terminal domain of ProRS 52
UDP-Glycosyltransferase/glycogen phosphorylase UDP-Glycosyltransferase/glycogen phosphorylase 52
DNA repair protein MutS, domain I P-loop containing nucleoside triphosphate hydrolases 54
PriA/YqbF domain GINS helical bundle-like 52
SWIB/MDM2 domain SWIB/MDM2 domain 53
Class II aaRS and biotin synthetases ThrRS/AlaRS common domain 54
P-loop containing nucleoside triphosphate hydrolases Tropomyosin 54
6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 53
FF domain FF domain 54
P-loop containing nucleoside triphosphate hydrolases Initiation factor IF2/eIF5b, domain 3 53
Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like 55
P-loop containing nucleoside triphosphate hydrolases RNase III domain-like 55
WGR domain-like ADP-ribosylation 55
WGR domain-like Domain of poly(ADP-ribose) polymerase 55
Creatinase/aminopeptidase "Winged helix" DNA-binding domain 53
ARM repeat C2 domain (Calcium/lipid-binding domain, CaLB) 54
UBA-like Hect, E3 ligase catalytic domain 52
PLP-dependent transferases PLP-dependent transferases 54
Nucleotidylyl transferase Ribosomal protein L25-like 52
Mannose-binding lectins Mannose-binding lectins 54
FAD/NAD(P)-binding domain EF-hand 51
CCCH zinc finger Eukaryotic type KH-domain (KH-domain type I) 53
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Alpha subunit of glutamate synthase, C-terminal domain 53
SBT domain Ankyrin repeat 52
FMN-linked oxidoreductases Alpha subunit of glutamate synthase, C-terminal domain 53
P-loop containing nucleoside triphosphate hydrolases HAND domain of the nucleosome remodeling ATPase ISWI 51
ARID-like HSP20-like chaperones 51
Sec63 N-terminal domain-like E set domains 53
DNA-binding domain DNA-binding pseudobarrel domain 54
PLP-binding barrel Alanine racemase C-terminal domain-like 52
Cullin repeat-like Cullin repeat-like 51
Class II aaRS ABD-related C-terminal domain of ProRS 52
Domain of poly(ADP-ribose) polymerase ADP-ribosylation 55
Periplasmic binding protein-like II ACT-like 52
DNase I-like DNase I-like 52
PYP-like sensor domain (PAS domain) ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 53
YrdC/RibB RibA-like 53
DNA ligase/mRNA capping enzyme, catalytic domain Nucleic acid-binding proteins 54
HAD-like BRCT domain 53
Nucleotidyltransferase Poly A polymerase C-terminal region-like 51
RNI-like ARM repeat 53
N-terminal, heterodimerisation domain of RBP7 (RpoE) Nucleic acid-binding proteins 51
Kelch motif Kelch motif 52
P-loop containing nucleoside triphosphate hydrolases Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain 53
Peptidase/esterase 'gauge' domain alpha-D-mannose-specific plant lectins 53
Plant lectins/antimicrobial peptides Barwin-like endoglucanases 42
Osmotin, thaumatin-like protein Protein kinase-like (PK-like) 42
Galactose-binding domain-like NAD(P)-binding Rossmann-fold domains 43
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 42
Plus3-like GYF domain 44
N-terminal domain of alpha and beta subunits of F1 ATP synthase P-loop containing nucleoside triphosphate hydrolases 42
Nicotinate/Quinolinate PRTase N-terminal domain-like Nicotinate/Quinolinate PRTase C-terminal domain-like 42
Protein kinase-like (PK-like) Formin homology 2 domain (FH2 domain) 42
Tropomyosin Tropomyosin 43
TRAF domain-like Cysteine proteinases 41
Domain of the SRP/SRP receptor G-proteins Signal peptide-binding domain 41
N-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase 42
CAD & PB1 domains RING/U-box 42
P-loop containing nucleoside triphosphate hydrolases RecA protein, C-terminal domain 42
Nucleotidyltransferase PAP/Archaeal CCA-adding enzyme, C-terminal domain 43
Rudiment single hybrid motif N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) 41
DNA repair protein MutS, domain II P-loop containing nucleoside triphosphate hydrolases 43
P-loop containing nucleoside triphosphate hydrolases Bromodomain 42
(Trans)glycosidases (Trans)glycosidases 43
GAF domain-like GAF domain-like 43
Single hybrid motif ClpP/crotonase 41
E set domains AMPKBI-like 41
Concanavalin A-like lectins/glucanases WD40 repeat-like 42
Dihydrofolate reductase-like Thymidylate synthase/dCMP hydroxymethylase 41
L domain-like Formin homology 2 domain (FH2 domain) 42
Ubiquitin-like Hect, E3 ligase catalytic domain 42
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Adenine nucleotide alpha hydrolases-like 42
Rudiment single hybrid motif ClpP/crotonase 41
Ubiquitin-like Protein kinase-like (PK-like) 41
EF-hand Mitochondrial carrier 42
PRTase-like PRTase-like 42
Zinc beta-ribbon Cyclin-like 41
GroEL-intermediate domain like GroEL-intermediate domain like 42
Ribonuclease PH domain 2-like Eukaryotic type KH-domain (KH-domain type I) 43
P-loop containing nucleoside triphosphate hydrolases Hypothetical protein YjiA, C-terminal domain 41
Ribosomal protein S5 domain 2-like Nucleic acid-binding proteins 43
Activating enzymes of the ubiquitin-like proteins Activating enzymes of the ubiquitin-like proteins 42
Cystatin/monellin Cystatin/monellin 41
Protease propeptides/inhibitors PA domain 41
HCP-like HIT/MYND zinc finger-like 43
"Winged helix" DNA-binding domain RNI-like 44
PUA domain-like Ribosomal protein S5 domain 2-like 42
Carbamoyl phosphate synthetase, small subunit N-terminal domain Class I glutamine amidotransferase-like 42
PYP-like sensor domain (PAS domain) GAF domain-like 43
WW domain FF domain 43
SWIB/MDM2 domain GYF domain 44
Concanavalin A-like lectins/glucanases PH domain-like 42
Flavoproteins Ferredoxin reductase-like, C-terminal NADP-linked domain 42
PUA domain-like P-loop containing nucleoside triphosphate hydrolases 42
ARM repeat BEACH domain 42
Ribonuclease H-like HRDC-like 42
PreATP-grasp domain N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) 41
UBA-like Thioredoxin-like 41
(Phosphotyrosine protein) phosphatases II E set domains 42
PAP/OAS1 substrate-binding domain PAP/Archaeal CCA-adding enzyme, C-terminal domain 43
PLC-like phosphodiesterases PLC-like phosphodiesterases 41
DNA repair protein MutS, domain II DNA repair protein MutS, domain III 43
Clathrin heavy-chain terminal domain ARM repeat 42
DNA repair protein MutS, domain I DNA repair protein MutS, domain II 43
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 42
Ankyrin repeat TPR-like 41
Aconitase iron-sulfur domain LeuD/IlvD-like 42
Chelatase Chlorophyll a-b binding protein 41
Aminopeptidase/glucanase lid domain Zn-dependent exopeptidases 41
HAD-like dsRNA-binding domain-like 43
Kelch motif Metallo-dependent phosphatases 41
Trypsin-like serine proteases Trypsin-like serine proteases 43
SAP domain FYVE/PHD zinc finger 42
Ribosomal protein S5 domain 2-like Type II DNA topoisomerase 42
POZ domain POZ domain 42
PurM N-terminal domain-like PurM C-terminal domain-like 42
Ricin B-like lectins Glycosyl hydrolase domain 41
beta-N-acetylhexosaminidase-like domain (Trans)glycosidases 41
DNA repair protein MutS, domain I DNA repair protein MutS, domain III 43
F-box domain WD40 repeat-like 43
ClpP/crotonase 6-phosphogluconate dehydrogenase C-terminal domain-like 42
NAD(P)-binding Rossmann-fold domains UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 41
Concanavalin A-like lectins/glucanases BEACH domain 42
SMAD/FHA domain P-loop containing nucleoside triphosphate hydrolases 41
Ribonuclease PH domain 2-like Nucleic acid-binding proteins 43
RING/U-box BRCT domain 42
Peptidase/esterase 'gauge' domain Protein kinase-like (PK-like) 42
PUA domain-like Nucleotidylyl transferase 41
PreATP-grasp domain ClpP/crotonase 41
NAD(P)-binding Rossmann-fold domains Succinyl-CoA synthetase domains 41
Ribonuclease H-like Eukaryotic type KH-domain (KH-domain type I) 41
Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 Elongation factor TFIIS domain 2 42
PH domain-like GTPase activation domain, GAP 41
WD40 repeat-like SNARE fusion complex 43
SNARE fusion complex SNARE fusion complex 42
Ribosomal protein S5 domain 2-like Eukaryotic type KH-domain (KH-domain type I) 43
ARM repeat TPR-like 41
ARID-like HMG-box 42
Prokaryotic type KH domain (KH-domain type II) Ribosomal protein S3 C-terminal domain 42
DNase I-like EF-hand 41
E set domains CBS-domain pair 41
TPR-like "Winged helix" DNA-binding domain 41
Protein kinase-like (PK-like) PH domain-like 41
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Type II DNA topoisomerase 42
6-phosphogluconate dehydrogenase C-terminal domain-like UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 41
Carbamate kinase-like ACT-like 42
Chitinase insertion domain Protein kinase-like (PK-like) 42
Glutathione synthetase ATP-binding domain-like ClpP/crotonase 41
WD40 repeat-like YVTN repeat-like/Quinoprotein amine dehydrogenase 44
ClpP/crotonase NAD(P)-binding Rossmann-fold domains 42
Ribosomal protein S5 domain 2-like DNA mismatch repair protein MutL 42
ARM repeat Concanavalin A-like lectins/glucanases 42
Obg GTP-binding protein N-terminal domain P-loop containing nucleoside triphosphate hydrolases 44
RING/U-box Ran binding protein zinc finger-like 41
Glutathione synthetase ATP-binding domain-like N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) 41
BRCT domain FYVE/PHD zinc finger 43
PA domain RING/U-box 32
UraD-Like Transthyretin (synonym: prealbumin) 32
Alpha subunit of glutamate synthase, C-terminal domain FAD/NAD(P)-binding domain 31
MOSC N-terminal domain-like PK beta-barrel domain-like 32
alpha-helical ferredoxin FAD/NAD(P)-binding domain 31
Starch-binding domain-like Phosphoglycerate mutase-like 31
Ribonuclease H-like SH2 domain 31
HAD-like NTF2-like 31
Tex N-terminal region-like RuvA domain 2-like 31
AN1-like Zinc finger AN1-like Zinc finger 32
beta-Galactosidase/glucuronidase domain (Trans)glycosidases 32
WW domain P-loop containing nucleoside triphosphate hydrolases 31
FAD/NAD(P)-binding domain NAD(P)-binding Rossmann-fold domains 31
RuvA domain 2-like Nucleic acid-binding proteins 31
Fe-S cluster assembly (FSCA) domain-like P-loop containing nucleoside triphosphate hydrolases 32
GYF domain SET domain 32
TATA-box binding protein-like TATA-box binding protein-like 31
PP2C-like Protein kinase-like (PK-like) 33
BAR/IMD domain-like ArfGap/RecO-like zinc finger 33
Eukaryotic RPB5 N-terminal domain RPB5-like RNA polymerase subunit 31
CarD-like P-loop containing nucleoside triphosphate hydrolases 32
Carbamoyl phosphate synthetase, large subunit connection domain Glutathione synthetase ATP-binding domain-like 32
Oxidoreductase molybdopterin-binding domain E set domains 33
Translation proteins ThrRS/AlaRS common domain 33
Carbamoyl phosphate synthetase, large subunit connection domain Methylglyoxal synthase-like 32
vWA-like SPOC domain-like 32
Translation initiation factor 2 beta, aIF2beta, N-terminal domain ARM repeat 31
RING/U-box TAZ domain 32
4Fe-4S ferredoxins P-loop containing nucleoside triphosphate hydrolases 31
Carbamoyl phosphate synthetase, large subunit connection domain PreATP-grasp domain 32
HIT/MYND zinc finger-like SET domain 32
N-terminal nucleophile aminohydrolases (Ntn hydrolases) alpha-helical ferredoxin 31
Galactose oxidase, central domain P-loop containing nucleoside triphosphate hydrolases 31
Retrovirus zinc finger-like domains DNA/RNA polymerases 32
Tetrahydrobiopterin biosynthesis enzymes-like Tetrahydrobiopterin biosynthesis enzymes-like 32
Nucleic acid-binding proteins SH2 domain 31
L domain-like WD40 repeat-like 32
Glutamyl tRNA-reductase catalytic, N-terminal domain NAD(P)-binding Rossmann-fold domains 31
SWIB/MDM2 domain CCCH zinc finger 33
Cytochrome c Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor 31
beta-Galactosidase/glucuronidase domain beta-Galactosidase/glucuronidase domain 32
PEP carboxykinase N-terminal domain PEP carboxykinase-like 31
P-loop containing nucleoside triphosphate hydrolases Glucocorticoid receptor-like (DNA-binding domain) 31
beta-sandwich domain of Sec23/24 WD40 repeat-like 32
Saposin Saposin 31
alpha-D-mannose-specific plant lectins Hairpin loop containing domain-like 33
Chromo domain-like S-adenosyl-L-methionine-dependent methyltransferases 33
TPR-like HSP20-like chaperones 31
CarD-like TRCF domain-like 32
FYVE/PHD zinc finger Chromo domain-like 32
Glutathione synthetase ATP-binding domain-like Methylglyoxal synthase-like 32
E set domains RNA-binding domain, RBD 31
RmlC-like cupins RmlC-like cupins 32
Thioredoxin-like "Winged helix" DNA-binding domain 32
Terpenoid synthases Terpenoid synthases 32
Carbamate kinase-like Acyl-CoA N-acyltransferases (Nat) 32
Cysteine-rich domain NAD kinase/diacylglycerol kinase-like 31
CAD & PB1 domains UBA-like 31
POZ domain WD40 repeat-like 33
ArfGap/RecO-like zinc finger Ankyrin repeat 33
TPR-like PUA domain-like 32
(Trans)glycosidases Protein kinase-like (PK-like) 31
WD40 repeat-like Bromodomain 31
Starch-binding domain-like Starch-binding domain-like 33
PDZ domain-like PDZ domain-like 33
4'-phosphopantetheinyl transferase 4'-phosphopantetheinyl transferase 32
Heme oxygenase-like HAD-like 32
Creatinase/prolidase N-terminal domain Creatinase/aminopeptidase 33
(Phosphotyrosine protein) phosphatases II (Phosphotyrosine protein) phosphatases II 32
Tex N-terminal region-like Ribonuclease H-like 31
CCCH zinc finger RING/U-box 32
Glutamyl tRNA-reductase catalytic, N-terminal domain Glutamyl tRNA-reductase dimerization domain 31
P-loop containing nucleoside triphosphate hydrolases TRCF domain-like 32
Fucose-specific lectin Fucose-specific lectin 31
F-box domain HIT/MYND zinc finger-like 32
ThrRS/AlaRS common domain Class II aaRS ABD-related 32
GYF domain CCCH zinc finger 33
PapD-like Ankyrin repeat 33
RNA-binding domain, RBD WW domain 32
DUSP-like Ubiquitin-like 33
P-loop containing nucleoside triphosphate hydrolases RNA-binding domain, RBD 32
E set domains E set domains 32
FYVE/PHD zinc finger Plus3-like 33
NTF2-like Probable bacterial effector-binding domain 31
Nucleotide-diphospho-sugar transferases Nucleotide-diphospho-sugar transferases 32
FMN-linked oxidoreductases alpha-helical ferredoxin 31
Sec63 N-terminal domain-like Sec63 N-terminal domain-like 32
FMN-linked oxidoreductases FAD/NAD(P)-binding domain 31
FYVE/PHD zinc finger SWIB/MDM2 domain 33
Plant invertase/pectin methylesterase inhibitor Plant invertase/pectin methylesterase inhibitor 31
Clavaminate synthase-like beta-beta-alpha zinc fingers 31
PreATP-grasp domain PreATP-grasp domain 32
WD40 repeat-like DNase I-like 32
Zinc-binding domain of translation initiation factor 2 beta ARM repeat 31
N-terminal nucleophile aminohydrolases (Ntn hydrolases) FAD/NAD(P)-binding domain 31
L domain-like Outer arm dynein light chain 1 33
Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 31
PreATP-grasp domain Methylglyoxal synthase-like 32
Dimeric alpha+beta barrel Dimeric alpha+beta barrel 32
Tex N-terminal region-like Nucleic acid-binding proteins 31
P-loop containing nucleoside triphosphate hydrolases Macro domain-like 32
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 31
PH domain-like Phospholipase D/nuclease 31
"Winged helix" DNA-binding domain E set domains 32
Alpha subunit of glutamate synthase, C-terminal domain alpha-helical ferredoxin 31
Rhomboid-like UBA-like 32
R1 subunit of ribonucleotide reductase, N-terminal domain PFL-like glycyl radical enzymes 31
Hairpin loop containing domain-like Protein kinase-like (PK-like) 33
Amidase signature (AS) enzymes TPR-like 31
CorA soluble domain-like Magnesium transport protein CorA, transmembrane region 32
PH domain-like ArfGap/RecO-like zinc finger 33
L9 N-domain-like Ribonuclease H-like 32
Plus3-like CCCH zinc finger 33
POZ domain Pentapeptide repeat-like 31
Cyclophilin-like TPR-like 31
FYVE/PHD zinc finger Ankyrin repeat 31
Glutathione synthetase ATP-binding domain-like Glutathione synthetase ATP-binding domain-like 32
Starch-binding domain-like P-loop containing nucleoside triphosphate hydrolases 31
UBC-like UBA-like 31
PX domain BAR/IMD domain-like 32
NAD(P)-binding Rossmann-fold domains Glutamyl tRNA-reductase dimerization domain 31
GST C-terminal domain-like eEF1-gamma domain 31
Histone-fold ARM repeat 31
Dcp2 domain-like Nudix 31
NAD(P)-binding Rossmann-fold domains 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 31
SMAD/FHA domain Phospholipase D/nuclease 32
F-box domain LysM domain 32
UBA-like PUG domain-like 32
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 31
ACT-like Formyltransferase 31
BAR/IMD domain-like PH domain-like 33
P-loop containing nucleoside triphosphate hydrolases vWA-like 32
PH domain-like Ankyrin repeat 33
Actin-like ATPase domain AF1104-like 32
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase DNA mismatch repair protein MutL 31
Transcription factor IIA (TFIIA), alpha-helical domain Transcription factor IIA (TFIIA), beta-barrel domain 32
Glutathione synthetase ATP-binding domain-like Phosphohistidine domain 32
TRAF domain-like ACT-like 31
FYVE/PHD zinc finger TAZ domain 32
RuvA domain 2-like RuvA domain 2-like 31
Acetyl-CoA synthetase-like ACP-like 33
Diaminopimelate epimerase-like Diaminopimelate epimerase-like 31
RuvA domain 2-like SH2 domain 31
BAR/IMD domain-like Ankyrin repeat 33
N-terminal nucleophile aminohydrolases (Ntn hydrolases) PRTase-like 31
SAP domain RNA-binding domain, RBD 31
Quinoprotein alcohol dehydrogenase-like Protein kinase-like (PK-like) 33
C2 domain (Calcium/lipid-binding domain, CaLB) vWA-like 31
P-loop containing nucleoside triphosphate hydrolases Phosphoglycerate mutase-like 31
Quinoprotein alcohol dehydrogenase-like Quinoprotein alcohol dehydrogenase-like 33
Actin-crosslinking proteins Actin-crosslinking proteins 32
SufE/NifU NadA-like 32
UBA-like P-loop containing nucleoside triphosphate hydrolases 33
Galactose-binding domain-like beta-Galactosidase/glucuronidase domain 32
Sec63 N-terminal domain-like "Winged helix" DNA-binding domain 32
Thioredoxin-like eEF1-gamma domain 31
EF-hand Calponin-homology domain, CH-domain 31
Ribonuclease H-like Nucleic acid-binding proteins 31
HAD-like Glycerol-3-phosphate (1)-acyltransferase 31
Rad51 N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 31
Ricin B-like lectins Ricin B-like lectins 31
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) ThrRS/AlaRS common domain 33
Ribonuclease H-like RuvA domain 2-like 31
Tex N-terminal region-like SH2 domain 31
TPR-like SET domain 22
FYSH domain Hypothetical protein AF0491, middle domain 21
(Phosphotyrosine protein) phosphatases II Nucleic acid-binding proteins 21
Acyl-CoA binding protein Kelch motif 22
Putative DNA-binding domain PheT/TilS domain 21
E set domains Riboflavin synthase domain-like 22
BRCT domain ADP-ribosylation 22
Protein kinase-like (PK-like) Acyl-CoA dehydrogenase NM domain-like 22
FYVE/PHD zinc finger PUA domain-like 21
F-box domain Actin-like ATPase domain 21
FabD/lysophospholipase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 22
Acyl-CoA N-acyltransferases (Nat) Acyl-CoA N-acyltransferases (Nat) 21
Nucleic acid-binding proteins GAD domain-like 21
IlvD/EDD N-terminal domain-like LeuD/IlvD-like 21
HIT-like HIT-like 21
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 21
Chaperone J-domain HSC20 (HSCB), C-terminal oligomerisation domain 21
DPP6 N-terminal domain-like Quinoprotein alcohol dehydrogenase-like 22
Methionyl-tRNA synthetase (MetRS), Zn-domain Nucleotidylyl transferase 21
Adenine nucleotide alpha hydrolases-like Thioredoxin-like 21
Second domain of FERM PH domain-like 21
Metallo-hydrolase/oxidoreductase Metallo-hydrolase/oxidoreductase 22
Insert subdomain of RNA polymerase alpha subunit RBP11-like subunits of RNA polymerase 21
YjeF N-terminal domain-like FMN-binding split barrel 22
Nucleotidylyl transferase Nucleic acid-binding proteins 21
Ribonuclease H-like RING/U-box 21
Activator of Hsp90 ATPase, Aha1 Bet v1-like 22
Six-hairpin glycosidases AbfB domain 21
alpha/beta knot Nucleic acid-binding proteins 21
Class I glutamine amidotransferase-like Ribulose-phoshate binding barrel 21
PAZ domain dsRNA-binding domain-like 22
Carbamate kinase-like NAD(P)-binding Rossmann-fold domains 21
ISP transmembrane anchor ISP domain 21
eIF2alpha middle domain-like eIF-2-alpha, C-terminal domain 21
Glycerol-3-phosphate (1)-acyltransferase EF-hand 21
Tropomyosin Apolipoprotein A-I 21
FYVE/PHD zinc finger GroEL apical domain-like 21
PurM N-terminal domain-like Class I glutamine amidotransferase-like 21
UDP-Glycosyltransferase/glycogen phosphorylase Ribosomal protein S5 domain 2-like 21
P-loop containing nucleoside triphosphate hydrolases Prismane protein-like 21
Class II aaRS and biotin synthetases Translation proteins 22
SWIB/MDM2 domain eIF1-like 22
FAD/NAD(P)-binding domain Trimeric LpxA-like enzymes 22
PsbU/PolX domain-like Nucleotidyltransferase 21
Putative DNA-binding domain Putative DNA-binding domain 21
UBC-like RING/U-box 22
Adenine nucleotide alpha hydrolases-like Molybdenum cofactor biosynthesis proteins 22
Cysteine proteinases UBA-like 21
Macro domain-like Zn-dependent exopeptidases 22
Putative DNA-binding domain Class II aaRS and biotin synthetases 21
Acid proteases UBA-like 21
Eukaryotic type KH-domain (KH-domain type I) RNA-binding domain, RBD 21
Formin homology 2 domain (FH2 domain) HAD-like 21
Class II aaRS and biotin synthetases Anticodon-binding domain of PheRS 21
Class II aaRS and biotin synthetases Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) 22
Acyl-CoA N-acyltransferases (Nat) Bromodomain 22
WD40 repeat-like Calcium-dependent phosphotriesterase 22
SufE/NifU BolA-like 21
Glutathione synthetase ATP-binding domain-like Phosphoglycerate mutase-like 21
ATP-dependent DNA ligase DNA-binding domain Nucleic acid-binding proteins 22
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) Translation proteins 22
TAZ domain TAZ domain 21
Acyl-CoA binding protein Ankyrin repeat 22
Clavaminate synthase-like RING/U-box 22
PurS-like PurM C-terminal domain-like 21
PH domain-like BSD domain-like 21
beta-sandwich domain of Sec23/24 SNARE fusion complex 21
GroEL-intermediate domain like SAICAR synthase-like 21
Ribonuclease PH domain 2-like Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 22
Heme-dependent peroxidases Heme-dependent peroxidases 21
Staphylococcal nuclease Tudor/PWWP/MBT 21
vWA-like C-terminal domain of Ku80 21
Clavaminate synthase-like Clavaminate synthase-like 21
FYVE/PHD zinc finger GYF domain 22
Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 Zinc beta-ribbon 21
Protein kinase-like (PK-like) (Phosphotyrosine protein) phosphatases II 21
BRCT domain Domain of poly(ADP-ribose) polymerase 22
Kelch motif Galactose oxidase, central domain 21
Heat shock protein 70kD (HSP70), C-terminal subdomain Heat shock protein 70kD (HSP70), C-terminal subdomain 21
Chaperone J-domain Sec63 N-terminal domain-like 21
P-loop containing nucleoside triphosphate hydrolases TPR-like 22
(Phosphotyrosine protein) phosphatases II Actin depolymerizing proteins 22
S15/NS1 RNA-binding domain Class II aaRS and biotin synthetases 21
FAD/NAD(P)-binding domain Heme-dependent catalase-like 22
Ubiquitin-like Acid proteases 21
WWE domain ADP-ribosylation 22
beta-beta-alpha zinc fingers Ankyrin repeat 21
PH domain-like Prismane protein-like 21
Taf5 N-terminal domain-like WD40 repeat-like 21
Homeodomain-like Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 22
Voltage-gated potassium channels Periplasmic binding protein-like II 22
PRTase-like Ribulose-phoshate binding barrel 21
Zn-dependent exopeptidases Transferrin receptor-like dimerisation domain 22
PA domain Zn-dependent exopeptidases 22
Acetyl-CoA synthetase-like Heme-dependent catalase-like 22
SNARE-like Domain of the SRP/SRP receptor G-proteins 21
Ribosomal protein S5 domain 2-like Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 22
Ribosomal L27 protein-like Eukaryotic type KH-domain (KH-domain type I) 21
Methionyl-tRNA synthetase (MetRS), Zn-domain Nucleic acid-binding proteins 21
2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain Alkaline phosphatase-like 21
F-box domain NTF2-like 21
Surp module (SWAP domain) ENTH/VHS domain 22
Pseudouridine synthase PUA domain-like 21
Glutathione synthetase ATP-binding domain-like Phosphoenolpyruvate/pyruvate domain 21
Chaperone J-domain E set domains 21
Formin homology 2 domain (FH2 domain) RING/U-box 22
tRNA-binding arm Class II aaRS and biotin synthetases 22
UBA-like Elongation factor Ts (EF-Ts), dimerisation domain 22
ARID-like FYVE/PHD zinc finger 21
Alpha-L RNA-binding motif Pseudouridine synthase 21
Oxidoreductase molybdopterin-binding domain Riboflavin synthase domain-like 22
Chromo domain-like Acyl-CoA N-acyltransferases (Nat) 21
Thioredoxin-like ERP29 C domain-like 21
Elongation factor Ts (EF-Ts), dimerisation domain Elongation factor Ts (EF-Ts), dimerisation domain 22
Hypothetical protein SAV1430 Fe-S cluster assembly (FSCA) domain-like 21
ACP-like Heme-dependent catalase-like 22
Heat shock protein 70kD (HSP70), peptide-binding domain Fumarate reductase respiratory complex transmembrane subunits 21
Cytidine deaminase-like Methylglyoxal synthase-like 22
Dom34/Pelota N-terminal domain-like L30e-like 21
Leukotriene A4 hydrolase N-terminal domain ARM repeat 21
Rhodanese/Cell cycle control phosphatase alpha/beta-Hydrolases 21
FAD/NAD(P)-binding domain S-adenosyl-L-methionine-dependent methyltransferases 21
FYSH domain beta-beta-alpha zinc fingers 21
Metalloproteases ("zincins"), catalytic domain ARM repeat 21
Chaperone J-domain Homeodomain-like 21
Arabinanase/levansucrase/invertase Nucleotide-diphospho-sugar transferases 21
Hypothetical protein AF0491, middle domain beta-beta-alpha zinc fingers 21
Ran binding protein zinc finger-like EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 21
Alpha-L RNA-binding motif S-adenosyl-L-methionine-dependent methyltransferases 21
MoeA N-terminal region -like MoeA C-terminal domain-like 21
WD40 repeat-like C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase 21
PYP-like sensor domain (PAS domain) CheY-like 21
Chromo domain-like Homeodomain-like 21
FYVE/PHD zinc finger SAICAR synthase-like 21
RNA-binding domain, RBD DPP6 N-terminal domain-like 21
FGAM synthase PurL, linker domain PurM C-terminal domain-like 21
Nucleoside hydrolase Nucleoside hydrolase 21
F-box domain SMI1/KNR4-like 21
2Fe-2S ferredoxin-like Formate dehydrogenase/DMSO reductase, domains 1-3 21
PDZ domain-like TPR-like 21
(Phosphotyrosine protein) phosphatases II DNA ligase/mRNA capping enzyme, catalytic domain 21
F-box domain ApaG-like 21
HMG-box HMG-box 21
Trimeric LpxA-like enzymes Trimeric LpxA-like enzymes 22
Ubiquitin-like Bromodomain 22
F-box domain SET domain 21
PurM N-terminal domain-like PurM N-terminal domain-like 21
EF-hand TPR-like 22
FYVE/PHD zinc finger CCCH zinc finger 22
Bactericidal permeability-increasing protein, BPI Bactericidal permeability-increasing protein, BPI 21
Ubiquitin-like HAD-like 21
C-terminal, gelsolin-like domain of Sec23/24 VHP, Villin headpiece domain 21
PheT/TilS domain Class II aaRS and biotin synthetases 21
PurS-like FGAM synthase PurL, linker domain 21
FAD/NAD(P)-binding domain ACP-like 22
TGS-like Class II aaRS and biotin synthetases 21
C-terminal UvrC-binding domain of UvrB ApaG-like 21
Zinc beta-ribbon Zinc beta-ribbon 21
PYP-like sensor domain (PAS domain) Galactose oxidase, central domain 21
UBA-like NSFL1 (p97 ATPase) cofactor p47, SEP domain 21
Folate-binding domain Aminomethyltransferase beta-barrel domain 21
Zn-dependent exopeptidases Carboxypeptidase regulatory domain-like 21
Cytochrome f, large domain Rudiment single hybrid motif 22
MurD-like peptide ligases, catalytic domain MurD-like peptide ligases, catalytic domain 21
Eukaryotic type KH-domain (KH-domain type I) Retrovirus zinc finger-like domains 21
Lysozyme-like Lysozyme-like 21
PurM C-terminal domain-like Class I glutamine amidotransferase-like 21
RNA-binding domain, RBD HCP-like 21
Ribosomal L27 protein-like Nucleic acid-binding proteins 21
Quinoprotein alcohol dehydrogenase-like YVTN repeat-like/Quinoprotein amine dehydrogenase 22
MoeA N-terminal region -like Molybdenum cofactor biosynthesis proteins 21
F-box domain Clavaminate synthase-like 22
PRP4-like WD40 repeat-like 21
Adenine nucleotide alpha hydrolases-like Argininosuccinate synthetase, C-terminal domain 21
GST C-terminal domain-like Ribosomal protein L25-like 21
PUA domain-like S-adenosyl-L-methionine-dependent methyltransferases 22
Cap-Gly domain Ubiquitin-like 22
RNA-binding domain, RBD Surp module (SWAP domain) 22
FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) Protein kinase-like (PK-like) 22
P-loop containing nucleoside triphosphate hydrolases Pre-protein crosslinking domain of SecA 22
Glutamine synthetase/guanido kinase GatB/YqeY motif 22
Oxidoreductase molybdopterin-binding domain Ferredoxin reductase-like, C-terminal NADP-linked domain 22
2Fe-2S ferredoxin-like alpha-helical ferredoxin 22
Eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment DNA breaking-rejoining enzymes 21
2Fe-2S ferredoxin-like 4Fe-4S ferredoxins 21
ACP-like Trimeric LpxA-like enzymes 22
P-loop containing nucleoside triphosphate hydrolases Outer arm dynein light chain 1 22
YjgF-like YjgF-like 21
Periplasmic binding protein-like II GlnB-like 21
Cytidine deaminase-like Cytidine deaminase-like 21
POZ domain Galactose-binding domain-like 21
TGS-like ThrRS/AlaRS common domain 21
PUG domain-like Ubiquitin-like 22
L domain-like Ubiquitin-like 22
PurM C-terminal domain-like PurM C-terminal domain-like 21
P-loop containing nucleoside triphosphate hydrolases HRDC-like 22
Nqo1 FMN-binding domain-like Nqo1 middle domain-like 21
BSD domain-like BSD domain-like 21
FGAM synthase PurL, linker domain Class I glutamine amidotransferase-like 21
Tropomyosin Smc hinge domain 21
RNA-binding domain, RBD ENTH/VHS domain 22
BRCT domain Nucleotidyltransferase 21
Cytochrome b5-like heme/steroid binding domain Riboflavin synthase domain-like 22
FGAM synthase PurL, linker domain PurM N-terminal domain-like 21
Staphylococcal nuclease Staphylococcal nuclease 21
Dom34/Pelota N-terminal domain-like Translational machinery components 21
E set domains Cytochrome b5-like heme/steroid binding domain 22
Ran binding protein zinc finger-like Translation proteins 21
SMAD/FHA domain PP2C-like 21
N-terminal domain of adenylylcyclase associated protein, CAP C-terminal domain of adenylylcyclase associated protein 21
L30e-like alpha/beta knot 21
Formin homology 2 domain (FH2 domain) BRCT domain 21
Trimeric LpxA-like enzymes Heme-dependent catalase-like 22
GST C-terminal domain-like Nucleotidylyl transferase 21
Cytochrome b5-like heme/steroid binding domain Ferredoxin reductase-like, C-terminal NADP-linked domain 22
ACT-like Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 21
Phosphohistidine domain Phosphoenolpyruvate/pyruvate domain 21
Voltage-gated potassium channels NAD(P)-binding Rossmann-fold domains 22
Ribosomal protein L7/12, oligomerisation (N-terminal) domain ClpS-like 21
SNARE-like P-loop containing nucleoside triphosphate hydrolases 21
Carbamate kinase-like Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 21
Class II aaRS and biotin synthetases GAD domain-like 21
Starch-binding domain-like Glutathione synthetase ATP-binding domain-like 21
PYP-like sensor domain (PAS domain) F-box domain 21
Undecaprenyl diphosphate synthase Undecaprenyl diphosphate synthase 21
Cytidine deaminase-like Dihydrofolate reductase-like 22
4Fe-4S ferredoxins Formate dehydrogenase/DMSO reductase, domains 1-3 21
Second domain of FERM P-loop containing nucleoside triphosphate hydrolases 21
Clc chloride channel Clc chloride channel 21
Concanavalin A-like lectins/glucanases Cysteine proteinases 22
DAK1/DegV-like DhaL-like 21
CBS-domain pair Inosine monophosphate dehydrogenase (IMPDH) 21
PurS-like Class I glutamine amidotransferase-like 21
HMA, heavy metal-associated domain Cu,Zn superoxide dismutase-like 21
Molybdenum cofactor biosynthesis proteins Molybdenum cofactor biosynthesis proteins 21
Actin-like ATPase domain Fumarate reductase respiratory complex transmembrane subunits 21
SSo0622-like Kelch motif 22
PA domain Transferrin receptor-like dimerisation domain 22
CCCH zinc finger WD40 repeat-like 21
AraD/HMP-PK domain-like HAD-like 22
Formate/glycerate dehydrogenase catalytic domain-like Formate/glycerate dehydrogenase catalytic domain-like 21
P-loop containing nucleoside triphosphate hydrolases Helical scaffold and wing domains of SecA 22
Actin depolymerizing proteins C-terminal, gelsolin-like domain of Sec23/24 21
Thioredoxin-like FAD-dependent thiol oxidase 21
Radical SAM enzymes Acyl-CoA N-acyltransferases (Nat) 21
ARM repeat "Winged helix" DNA-binding domain 21
Carbamate kinase-like ALDH-like 21
Oxidoreductase molybdopterin-binding domain Cytochrome b5-like heme/steroid binding domain 22
beta-Galactosidase/glucuronidase domain Galactose mutarotase-like 21
Ribonuclease PH domain 2-like Ribonuclease PH domain 2-like 22
AN1-like Zinc finger beta-beta-alpha zinc fingers 21
FAD/NAD(P)-binding domain SMAD/FHA domain 21
GST C-terminal domain-like Nucleic acid-binding proteins 21
Methionyl-tRNA synthetase (MetRS), Zn-domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 21
SMI1/KNR4-like ApaG-like 21
DNA polymerase beta, N-terminal domain-like Nucleotidyltransferase 21
TGS-like Class II aaRS ABD-related 21
PurS-like PurM N-terminal domain-like 21
PAZ domain RNase III domain-like 22
UDP-Glycosyltransferase/glycogen phosphorylase GHMP Kinase, C-terminal domain 21
Macro domain-like CRAL/TRIO domain 21
Endosomal sorting complex assembly domain VPS28 C-terminal domain-like 21
Elongation factor TFIIS domain 2 Zinc beta-ribbon 21
ARM repeat FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) 22
Periplasmic binding protein-like II Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain 22
BRCT domain DNA polymerase beta, N-terminal domain-like 21
S15/NS1 RNA-binding domain Class II aaRS ABD-related 21
Acetyl-CoA synthetase-like Trimeric LpxA-like enzymes 22
Nqo1 middle domain-like Nqo1C-terminal domain-like 21
Molybdenum cofactor biosynthesis proteins MoeA C-terminal domain-like 21
Ubiquitin-like F-box domain 21
E set domains Ferredoxin reductase-like, C-terminal NADP-linked domain 22
Nqo1 FMN-binding domain-like Nqo1C-terminal domain-like 21
C-type lectin-like Protein kinase-like (PK-like) 21
Nucleic acid-binding proteins eIF-2-alpha, C-terminal domain 21
DNA polymerase beta, N-terminal domain-like PsbU/PolX domain-like 21
Riboflavin synthase domain-like Riboflavin synthase domain-like 22
FAD/NAD(P)-binding domain Acetyl-CoA synthetase-like 22
Second domain of FERM Prismane protein-like 21
SPOC domain-like C-terminal domain of Ku80 21
(Phosphotyrosine protein) phosphatases II NAD kinase/diacylglycerol kinase-like 21
BRCT domain PsbU/PolX domain-like 21
UBC-like Endosomal sorting complex assembly domain 21
BRCT domain WGR domain-like 22
Starch-binding domain-like (Trans)glycosidases 22
Nucleic acid-binding proteins eIF2alpha middle domain-like 21
P-loop containing nucleoside triphosphate hydrolases Prokaryotic type KH domain (KH-domain type II) 21
PH domain-like HMG-box 21
DNA clamp DNA clamp 21
Aspartate/glutamate racemase Aspartate/glutamate racemase 21
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases Nucleic acid-binding proteins 21
PH domain-like (Phosphotyrosine protein) phosphatases II 22
Pre-protein crosslinking domain of SecA Helical scaffold and wing domains of SecA 22
Mechanosensitive channel protein MscS (YggB), transmembrane region Sm-like ribonucleoproteins 21
ATP-dependent DNA ligase DNA-binding domain DNA ligase/mRNA capping enzyme, catalytic domain 22
Chromo domain-like Ankyrin repeat 22
ARM repeat FabD/lysophospholipase-like 22
Ran binding protein zinc finger-like P-loop containing nucleoside triphosphate hydrolases 21
Thiamin pyrophosphokinase, catalytic domain Thiamin pyrophosphokinase, substrate-binding domain 21
Carbon-nitrogen hydrolase Adenine nucleotide alpha hydrolases-like 21
Translation initiation factor IF3, N-terminal domain Translation initiation factor IF3, C-terminal domain 22
Nucleic acid-binding proteins "Winged helix" DNA-binding domain 21
P-loop containing nucleoside triphosphate hydrolases PAZ domain 22
Ankyrin repeat RCC1/BLIP-II 21
Pre-PUA domain PUA domain-like 21
Adenine nucleotide alpha hydrolases-like YjgF-like 21
NAD(P)-binding Rossmann-fold domains Citrate synthase 21
SAP domain WGR domain-like 11
Adenine nucleotide alpha hydrolases-like DHS-like NAD/FAD-binding domain 11
6-phosphogluconate dehydrogenase C-terminal domain-like NAP-like 11
Rudiment single hybrid motif Cytochrome f subunit of the cytochrome b6f complex, transmembrane anchor 11
Sec63 N-terminal domain-like DNA/RNA polymerases 11
L domain-like Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 11
DHS-like NAD/FAD-binding domain alpha/beta-Hydrolases 11
Nucleotidyltransferase TGS-like 11
FYVE/PHD zinc finger Bromodomain 11
P-loop containing nucleoside triphosphate hydrolases RuvA domain 2-like 11
ssDNA-binding transcriptional regulator domain Retrovirus zinc finger-like domains 11
Tubulin nucleotide-binding domain-like Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 11
Protein kinase-like (PK-like) Ribosomal protein S3 C-terminal domain 11
BRCT domain P-loop containing nucleoside triphosphate hydrolases 11
Periplasmic binding protein-like I Voltage-gated potassium channels 11
Toll/Interleukin receptor TIR domain NAC domain 11
Outer arm dynein light chain 1 ARM repeat 11
Clavaminate synthase-like Formin homology 2 domain (FH2 domain) 11
PDZ domain-like Rubredoxin-like 11
Ran binding protein zinc finger-like DNase I-like 11
5' to 3' exonuclease, C-terminal subdomain Chromo domain-like 11
R3H domain Ankyrin repeat 11
PGBD-like DnaJ/Hsp40 cysteine-rich domain 11
Nucleotide-diphospho-sugar transferases ARM repeat 11
Tryptophan synthase beta subunit-like PLP-dependent enzymes ACT-like 11
Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain Tropomyosin 11
P-loop containing nucleoside triphosphate hydrolases Epsilon subunit of F1F0-ATP synthase N-terminal domain 11
L domain-like FabD/lysophospholipase-like 11
Protein kinase-like (PK-like) Subtilisin-like 11
DNA repair protein MutS, domain III SMR domain-like 11
Glucocorticoid receptor-like (DNA-binding domain) BRCT domain 11
alpha/beta-Hydrolases NAD(P)-binding Rossmann-fold domains 11
L domain-like LigB-like 11
SMAD/FHA domain BRCT domain 11
Retrovirus zinc finger-like domains RING/U-box 11
alpha/beta-Hydrolases P-loop containing nucleoside triphosphate hydrolases 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) alpha/beta-Hydrolases 11
dsRNA-binding domain-like Nitrite/Sulfite reductase N-terminal domain-like 11
cAMP-binding domain-like Thioesterase/thiol ester dehydrase-isomerase 11
Outer arm dynein light chain 1 FabD/lysophospholipase-like 11
Histone-fold HLH, helix-loop-helix DNA-binding domain 11
Dihydrofolate reductase-like YbiA-like 11
Ribosomal protein S5 domain 2-like Nitrite/Sulfite reductase N-terminal domain-like 11
Urease, gamma-subunit Composite domain of metallo-dependent hydrolases 11
EF-hand RING/U-box 11
P-loop containing nucleoside triphosphate hydrolases PLP-dependent transferases 11
Flavoproteins Radical SAM enzymes 11
Nucleic acid-binding proteins BRCA2 tower domain 11
ISP domain Chlorophyll a-b binding protein 11
RNI-like Glutathione synthetase ATP-binding domain-like 11
Translation proteins SH3-like domain Translation proteins SH3-like domain 11
Ubiquitin-like Galactose-binding domain-like 11
Galactose mutarotase-like Galactose mutarotase-like 11
TPR-like SMR domain-like 11
Carboxypeptidase regulatory domain-like Carboxypeptidase regulatory domain-like 11
Metallo-dependent phosphatases Metallo-dependent phosphatases 11
TPR-like Metallo-dependent phosphatases 11
Thioredoxin-like VC0467-like 11
Protein kinase-like (PK-like) Class II aaRS and biotin synthetases 11
DUSP-like DUSP-like 11
SAM/Pointed domain Metallo-hydrolase/oxidoreductase 11
P-loop containing nucleoside triphosphate hydrolases SMR domain-like 11
Phosphoglycerate kinase S-adenosyl-L-methionine-dependent methyltransferases 11
Homeodomain-like Bromodomain 11
DPP6 N-terminal domain-like Tricorn protease N-terminal domain 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
4Fe-4S ferredoxins Metallo-hydrolase/oxidoreductase 11
HIT/MYND zinc finger-like Creatinase/aminopeptidase 11
Protein kinase-like (PK-like) BEACH domain 11
Nucleotide-binding domain Nucleotide-binding domain 11
Rhomboid-like Ran binding protein zinc finger-like 11
TAF(II)230 TBP-binding fragment Bromodomain 11
Adenine nucleotide alpha hydrolases-like GMP synthetase C-terminal dimerisation domain 11
WD40 repeat-like Cyclophilin-like 11
P-loop containing nucleoside triphosphate hydrolases Formin homology 2 domain (FH2 domain) 11
PUA domain-like eIF1-like 11
ARM repeat SH3-domain 11
CoA-dependent acyltransferases CoA-dependent acyltransferases 11
Eukaryotic type KH-domain (KH-domain type I) LigT-like 11
RNA-binding domain, RBD Clavaminate synthase-like 11
MHC antigen-recognition domain ARM repeat 11
Urease, gamma-subunit Metallo-dependent hydrolases 11
Thiamin diphosphate-binding fold (THDP-binding) Enolase N-terminal domain-like 11
Aldolase 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 11
(2r)-phospho-3-sulfolactate synthase ComA (2r)-phospho-3-sulfolactate synthase ComA 11
Voltage-gated potassium channels TrkA C-terminal domain-like 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase S13-like H2TH domain 11
DNA primase core P-loop containing nucleoside triphosphate hydrolases 11
Retrovirus zinc finger-like domains Plus3-like 11
Nucleotidyltransferase ACT-like 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
alpha-D-mannose-specific plant lectins Quinoprotein alcohol dehydrogenase-like 11
Nucleic acid-binding proteins TPR-like 11
EF-hand Toll/Interleukin receptor TIR domain 11
POZ domain Tricorn protease domain 2 11
N-terminal domain of MutM-like DNA repair proteins S13-like H2TH domain 11
MHC antigen-recognition domain Protein kinase-like (PK-like) 11
cAMP-binding domain-like cAMP-binding domain-like 11
beta-beta-alpha zinc fingers CCCH zinc finger 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases tRNA-binding arm 11
Cyclophilin-like RNA-binding domain, RBD 11
6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK Dihydropteroate synthetase-like 11
Thioredoxin-like NHL repeat 11
"Winged helix" DNA-binding domain Zinc beta-ribbon 11
P-loop containing nucleoside triphosphate hydrolases GIY-YIG endonuclease 11
C2 domain (Calcium/lipid-binding domain, CaLB) Protein kinase-like (PK-like) 11
ValRS/IleRS/LeuRS editing domain tRNA-binding arm 11
Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases 11
PP2C-like cAMP-binding domain-like 11
alpha/beta-Hydrolases alpha/beta-Hydrolases 11
FAD/NAD(P)-binding domain Thioredoxin-like 11
Nucleotidylyl transferase tRNA-binding arm 11
Translation proteins Nucleotide-diphospho-sugar transferases 11
Formiminotransferase domain of formiminotransferase-cyclodeaminase. Formiminotransferase domain of formiminotransferase-cyclodeaminase. 11
F-box domain ARM repeat 11
Glucocorticoid receptor-like (DNA-binding domain) WGR domain-like 11
Glucocorticoid receptor-like (DNA-binding domain) Domain of poly(ADP-ribose) polymerase 11
DNA-binding domain PLC-like phosphodiesterases 11
Trimeric LpxA-like enzymes ARM repeat 11
Ribonuclease H-like Ribonuclease H-like 11
beta-beta-alpha zinc fingers S-adenosyl-L-methionine-dependent methyltransferases 11
DNA-binding pseudobarrel domain PLC-like phosphodiesterases 11
Fumarylacetoacetate hydrolase, FAH, N-terminal domain FAH 11
Cysteine proteinases Formin homology 2 domain (FH2 domain) 11
DNA repair protein MutS, domain I GIY-YIG endonuclease 11
Urease, beta-subunit Composite domain of metallo-dependent hydrolases 11
NHL repeat WD40 repeat-like 11
FAD-linked reductases, C-terminal domain 4Fe-4S ferredoxins 11
Metallo-dependent hydrolases Glutamine synthetase/guanido kinase 11
P-loop containing nucleoside triphosphate hydrolases Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 11
Cryptochrome/photolyase, N-terminal domain alpha/beta-Hydrolases 11
CRAL/TRIO domain CRAL/TRIO domain 11
DNA ligase/mRNA capping enzyme, catalytic domain BRCT domain 11
Class II aaRS and biotin synthetases HD-domain/PDEase-like 11
UBC-like Class II aaRS and biotin synthetases 11
FMN-dependent nitroreductase-like FMN-dependent nitroreductase-like 11
Nucleotidylyl transferase Alpha-L RNA-binding motif 11
P-loop containing nucleoside triphosphate hydrolases Protein kinase-like (PK-like) 11
PH domain-like C2 domain (Calcium/lipid-binding domain, CaLB) 11
WD40 repeat-like TPR-like 11
PRC-barrel domain PRC-barrel domain 11
SAP domain Domain of poly(ADP-ribose) polymerase 11
eEF1-gamma domain Protein kinase-like (PK-like) 11
PRP4-like Functional domain of the splicing factor Prp18 11
Chaperone J-domain Chaperone J-domain 11
Class I glutamine amidotransferase-like ADC synthase 11
SAP domain CCCH zinc finger 11
S-adenosyl-L-methionine-dependent methyltransferases Putative methyltransferase TM0872, insert domain 11
DNA-glycosylase Nudix 11
Toll/Interleukin receptor TIR domain WRKY DNA-binding domain 11
PUA domain-like SWIB/MDM2 domain 11
Starch-binding domain-like Cna protein B-type domain 11
MFS general substrate transporter RNA-binding domain, RBD 11
P-loop containing nucleoside triphosphate hydrolases LigB-like 11
MurE/MurF N-terminal domain MurD-like peptide ligases, catalytic domain 11
F-box domain P-loop containing nucleoside triphosphate hydrolases 11
GroEL equatorial domain-like GroEL equatorial domain-like 11
S-adenosyl-L-methionine-dependent methyltransferases Radical SAM enzymes 11
HAD-like Thioredoxin-like 11
P-loop containing nucleoside triphosphate hydrolases Obg GTP-binding protein C-terminal domain 11
TPR-like RNA-binding domain, RBD 11
FAD-binding/transporter-associated domain-like Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain 11
Granulin repeat Formin homology 2 domain (FH2 domain) 11
Protein kinase-like (PK-like) NTF2-like 11
PIN domain-like Chromo domain-like 11
Nucleotidyltransferase EF-hand 11
Single hybrid motif Single hybrid motif 11
Clavaminate synthase-like FYVE/PHD zinc finger 11
Arabinanase/levansucrase/invertase Arabinanase/levansucrase/invertase 11
NAD(P)-binding Rossmann-fold domains YgbK-like 11
dsRNA-binding domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 11
SRF-like Troponin coil-coiled subunits 11
POZ domain YVTN repeat-like/Quinoprotein amine dehydrogenase 11
"Winged helix" DNA-binding domain Class II aaRS and biotin synthetases 11
Lipocalins Lipocalins 11
SAP domain ADP-ribosylation 11
Acyl-CoA binding protein Galactose oxidase, central domain 11
Clavaminate synthase-like Barwin-like endoglucanases 11
Class I glutamine amidotransferase-like GMP synthetase C-terminal dimerisation domain 11
Insect cysteine-rich antifreeze protein Insect cysteine-rich antifreeze protein 11
Adenine nucleotide alpha hydrolases-like alpha/beta-Hydrolases 11
Obg GTP-binding protein N-terminal domain Obg GTP-binding protein C-terminal domain 11
TGS-like ACT-like 11
RING/U-box Myosin rod fragments 11
DEK C-terminal domain ssDNA-binding transcriptional regulator domain 11
TPR-like RNI-like 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase RING/U-box 11
Translation proteins PRC-barrel domain 11
cAMP-binding domain-like Protein kinase-like (PK-like) 11
PIN domain-like Nucleic acid-binding proteins 11
vWA-like Cysteine-rich domain 11
RNA-binding domain, RBD Formin homology 2 domain (FH2 domain) 11
PRC-barrel domain Nucleotide-diphospho-sugar transferases 11
The spindle assembly checkpoint protein mad2 "Winged helix" DNA-binding domain 11
Concanavalin A-like lectins/glucanases RING/U-box 11
NusB-like S-adenosyl-L-methionine-dependent methyltransferases 11
RuBisCO, large subunit, small (N-terminal) domain RuBisCo, C-terminal domain 11
EF-hand L domain-like 11
SPOC domain-like SAP domain 11
Ribosomal protein S2 Nucleotide-diphospho-sugar transferases 11
"Winged helix" DNA-binding domain Activator of Hsp90 ATPase, Aha1 11
dsRNA-binding domain-like S-adenosyl-L-methionine-dependent methyltransferases 11
HAD-like HAD-like 11
6-phosphogluconate dehydrogenase C-terminal domain-like YgbK-like 11
FYVE/PHD zinc finger ARM repeat 11
Protein kinase-like (PK-like) UBA-like 11
"Winged helix" DNA-binding domain Bet v1-like 11
P-loop containing nucleoside triphosphate hydrolases Cysteine proteinases 11
Thiamin diphosphate-binding fold (THDP-binding) alpha/beta-Hydrolases 11
PR-1-like PR-1-like 11
YgbK-like Aldolase 11
Urease, gamma-subunit Urease, beta-subunit 11
Cysteine proteinases Galactose-binding domain-like 11
Histone-fold Histone-fold 11
WD40 repeat-like DPP6 N-terminal domain-like 11
vWA-like SAP domain 11
HD-domain/PDEase-like EF-hand 11
UBA-like KA1-like 11
HD-domain/PDEase-like ACT-like 11
S-adenosyl-L-methionine-dependent methyltransferases Flavoproteins 11
Nucleic acid-binding proteins BRCT domain 11
BRCT domain Lesion bypass DNA polymerase (Y-family), little finger domain 11
Isochorismatase-like hydrolases Isochorismatase-like hydrolases 11
Ribokinase-like Thiamin phosphate synthase 11
Toll/Interleukin receptor TIR domain Outer arm dynein light chain 1 11
ARM repeat Chaperone J-domain 11
HAD-like NHL repeat 11
P-loop containing nucleoside triphosphate hydrolases DNA/RNA polymerases 11
UBC-like Protein kinase-like (PK-like) 11
S13-like H2TH domain Ribosomal protein S5 domain 2-like 11
TATA-box binding protein-like DNA-glycosylase 11
Nucleotidylyl transferase An anticodon-binding domain of class I aminoacyl-tRNA synthetases 11
Putative isomerase YbhE Quinoprotein alcohol dehydrogenase-like 11
P-loop containing nucleoside triphosphate hydrolases HIT-like 11
HMA, heavy metal-associated domain Metal cation-transporting ATPase, ATP-binding domain N 11
Glucocorticoid receptor-like (DNA-binding domain) ADP-ribosylation 11
ARM repeat alpha/beta knot 11
RNA-binding domain, RBD DNase I-like 11
Chaperone J-domain Thioredoxin-like 11
DNA/RNA polymerases L domain-like 11
Metalloproteases ("zincins"), catalytic domain HAD-like 11
Ferredoxin reductase-like, C-terminal NADP-linked domain Ferredoxin reductase-like, C-terminal NADP-linked domain 11
dsRNA-binding domain-like FKBP-like 11
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 Eukaryotic type KH-domain (KH-domain type I) 11
Ankyrin repeat S-adenosyl-L-methionine-dependent methyltransferases 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Nucleotidylyl transferase 11
C-terminal domain of alpha and beta subunits of F1 ATP synthase Epsilon subunit of F1F0-ATP synthase N-terminal domain 11
Metallo-dependent hydrolases Glutamine synthetase, N-terminal domain 11
P-loop containing nucleoside triphosphate hydrolases CCCH zinc finger 11
Concanavalin A-like lectins/glucanases Calpain large subunit, middle domain (domain III) 11
FYVE/PHD zinc finger DNA-binding domain 11
CCCH zinc finger HIT-like 11
Thiamin diphosphate-binding fold (THDP-binding) Enolase C-terminal domain-like 11
Cytochrome f, large domain Cytochrome f subunit of the cytochrome b6f complex, transmembrane anchor 11
Glycosyl hydrolase domain Glycosyl hydrolase domain 11
GroEL-intermediate domain like HAD-like 11
Nucleic acid-binding proteins Elongation factor Ts (EF-Ts), dimerisation domain 11
BRCT domain post-AAA+ oligomerization domain-like 11
F-box domain Pectin lyase-like 11
RNA-binding domain, RBD PWI domain 11
Thioredoxin-like Six-hairpin glycosidases 11
PUA domain-like alpha/beta knot 11
HD-domain/PDEase-like TGS-like 11
ATP-dependent DNA ligase DNA-binding domain BRCT domain 11
Pseudo ankyrin repeat-like Ankyrin repeat 11
DNA-binding domain Bromodomain 11
Metallo-hydrolase/oxidoreductase DNA ligase/mRNA capping enzyme, catalytic domain 11
Trigger factor ribosome-binding domain FKBP-like 11
"Winged helix" DNA-binding domain Protein kinase-like (PK-like) 11
PH domain-like "Winged helix" DNA-binding domain 11
C2 domain (Calcium/lipid-binding domain, CaLB) MHC antigen-recognition domain 11
Acyl-CoA N-acyltransferases (Nat) BRCT domain 11
Starch-binding domain-like Carboxypeptidase regulatory domain-like 11
Quinoprotein alcohol dehydrogenase-like Calcium-dependent phosphotriesterase 11
SAP domain DNase I-like 11
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 Nucleic acid-binding proteins 11
Actin-like ATPase domain HD-domain/PDEase-like 11
FAD/NAD(P)-binding domain alpha/beta-Hydrolases 11
ARM repeat L30e-like 11
Tudor/PWWP/MBT Tudor/PWWP/MBT 11
Type II DNA topoisomerase GyrA/ParC C-terminal domain-like 11
Nucleic acid-binding proteins S-adenosyl-L-methionine-dependent methyltransferases 11
R3H domain P-loop containing nucleoside triphosphate hydrolases 11
Chaperone J-domain CSL zinc finger 11
MurE/MurF N-terminal domain MurD-like peptide ligases, peptide-binding domain 11
Nucleic acid-binding proteins UBA-like 11
HMG-box TRAF domain-like 11
Calponin-homology domain, CH-domain ARM repeat 11
Enolase N-terminal domain-like alpha/beta-Hydrolases 11
DHS-like NAD/FAD-binding domain Enolase N-terminal domain-like 11
WD40 repeat-like Tricorn protease domain 2 11
Cytidine deaminase-like YbiA-like 11
Cytochrome P450 DNA/RNA polymerases 11
Metallo-hydrolase/oxidoreductase ATP-dependent DNA ligase DNA-binding domain 11
F-box domain Cytochrome P450 11
WD40 repeat-like Peptidase/esterase 'gauge' domain 11
UBA-like post-AAA+ oligomerization domain-like 11
alpha/beta-Hydrolases L domain-like 11
FAD/NAD(P)-binding domain 4Fe-4S ferredoxins 11
L21p-like L21p-like 11
RING/U-box Cyclophilin-like 11
RNA-binding domain, RBD UBA-like 11
ClpP/crotonase S-adenosyl-L-methionine-dependent methyltransferases 11
Mitochondrial glycoprotein MAM33-like Fumarate reductase respiratory complex transmembrane subunits 11
BRCA2 helical domain Nucleic acid-binding proteins 11
Cap-Gly domain L domain-like 11
N-utilization substance G protein NusG, N-terminal domain Translation proteins SH3-like domain 11
FAD/NAD(P)-binding domain Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 11
Homeodomain-like Formin homology 2 domain (FH2 domain) 11
Retrovirus zinc finger-like domains Periplasmic binding protein-like II 11
TPR-like Cysteine proteinases 11
Putative isomerase YbhE DNase I-like 11
Rhodanese/Cell cycle control phosphatase Rhodanese/Cell cycle control phosphatase 11
BRCA2 helical domain BRCA2 tower domain 11
Tricorn protease domain 2 Cyclophilin-like 11
6-phosphogluconate dehydrogenase C-terminal domain-like Aldolase 11
L domain-like Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 11
Acetyl-CoA synthetase-like Quinoprotein alcohol dehydrogenase-like 11
LEA14-like LEA14-like 11
Urease, beta-subunit Metallo-dependent hydrolases 11
BRCT domain DNA/RNA polymerases 11
Putative isomerase YbhE WD40 repeat-like 11
Glucocorticoid receptor-like (DNA-binding domain) HAD-like 11
P-loop containing nucleoside triphosphate hydrolases D-aminoacid aminotransferase-like PLP-dependent enzymes 11
Restriction endonuclease-like RuvA domain 2-like 11
DNA/RNA polymerases Protein kinase-like (PK-like) 11
ARM repeat alpha/beta-Hydrolases 11
PLP-dependent transferases MOSC N-terminal domain-like 11
Oxygen-evolving enhancer protein 3, Cyclophilin-like 11
Protein prenylyltransferase L domain-like 11
FAD/NAD(P)-binding domain HI0933 insert domain-like 11
Phosphoglycerate mutase-like Phosphoglycerate mutase-like 11
Trigger factor ribosome-binding domain Triger factor/SurA peptide-binding domain-like 11
FKBP-like Rhodanese/Cell cycle control phosphatase 11
Macro domain-like Macro domain-like 11
Class I glutamine amidotransferase-like Adenine nucleotide alpha hydrolases-like 11
DNA/RNA polymerases Subtilisin-like 11
Protein kinase-like (PK-like) Acyl-CoA dehydrogenase C-terminal domain-like 11
ACP-like Quinoprotein alcohol dehydrogenase-like 11
S-adenosyl-L-methionine-dependent methyltransferases PLP-dependent transferases 11
TAF(II)230 TBP-binding fragment Ubiquitin-like 11
"Winged helix" DNA-binding domain HRDC-like 11
alpha-ketoacid dehydrogenase kinase, N-terminal domain ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Metalloproteases ("zincins"), catalytic domain Metalloproteases ("zincins"), catalytic domain 11
FKBP-like Triger factor/SurA peptide-binding domain-like 11
L domain-like ARM repeat 11
HisI-like all-alpha NTP pyrophosphatases 11
SSo0622-like S-adenosyl-L-methionine-dependent methyltransferases 11
DHS-like NAD/FAD-binding domain Enolase C-terminal domain-like 11
Enolase C-terminal domain-like alpha/beta-Hydrolases 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) SIS domain 11
HIT/MYND zinc finger-like RING/U-box 11
Ankyrin repeat RNA-binding domain, RBD 11
Ribose/Galactose isomerase RpiB/AlsB RmlC-like cupins 11
Kelch motif S-adenosyl-L-methionine-dependent methyltransferases 11
Starch-binding domain-like Nucleic acid-binding proteins 11
Chaperone J-domain RNA-binding domain, RBD 11
FAD-linked reductases, C-terminal domain Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 11
lambda repressor-like DNA-binding domains Cyanase C-terminal domain 11
Prokaryotic type I DNA topoisomerase Retrovirus zinc finger-like domains 11
Cysteine proteinases Calpain large subunit, middle domain (domain III) 11
Apolipoprotein A-I alpha/beta-Hydrolases 11
FKBP-like S-adenosyl-L-methionine-dependent methyltransferases 11
Macro domain-like HIT-like 11
Ribosomal protein S5 domain 2-like Nitrite and sulphite reductase 4Fe-4S domain-like 11
Carboxypeptidase regulatory domain-like Cna protein B-type domain 11
Metallo-hydrolase/oxidoreductase Nucleic acid-binding proteins 11

Jump to [ Top of page · Add/remove domain pairs · Add/remove genomes · Domain combination pairs ]