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Domain combination pairs in Pseudoalteromonas atlantica T6c

All pairs of domain combinations at the superfamily level are listed here.
The identification of domain pairs does not account for the possibility of non-contiguous domains. Inserted, or interlaced, domains are seen as having a simple pair ordering.

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Adjacent domain pairs graph

Graph of adjacent domain pairs.


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Domain combination pairs

760 domain combination pairs.
Click on a column heading to sort that column, or the 'View' button to see domain architetures for that domain pair combination.

Superfamily (N) Superfamily (C) Number of occurrances Number unique
Homodimeric domain of signal transducing histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 4625
"Winged helix" DNA-binding domain Periplasmic binding protein-like II 412
P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases 2914
Nucleotide cyclase EAL domain-like 2710
GroES-like NAD(P)-binding Rossmann-fold domains 242
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheY-like 2118
Homodimeric domain of signal transducing histidine kinase CheY-like 2017
Actin-like ATPase domain Actin-like ATPase domain 185
CheY-like C-terminal effector domain of the bipartite response regulators 172
PYP-like sensor domain (PAS domain) ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 1712
PYP-like sensor domain (PAS domain) Homodimeric domain of signal transducing histidine kinase 1712
NAD(P)-binding Rossmann-fold domains 6-phosphogluconate dehydrogenase C-terminal domain-like 176
Acyl-CoA dehydrogenase NM domain-like Acyl-CoA dehydrogenase C-terminal domain-like 172
Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain 167
Homeodomain-like Homeodomain-like 156
Sigma2 domain of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 153
NAD(P)-binding Rossmann-fold domains Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 155
Thioredoxin-like GST C-terminal domain-like 142
Homeodomain-like Tetracyclin repressor-like, C-terminal domain 131
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 136
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB transmembrane domain 136
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB transmembrane domain 136
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 136
"Winged helix" DNA-binding domain GntR ligand-binding domain-like 121
(Trans)glycosidases Glycosyl hydrolase domain 1210
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 125
P-loop containing nucleoside triphosphate hydrolases Homeodomain-like 105
PYP-like sensor domain (PAS domain) CheY-like 109
FAD/NAD(P)-binding domain FAD-linked reductases, C-terminal domain 104
"Winged helix" DNA-binding domain Dimeric alpha+beta barrel 101
Multidrug resistance efflux transporter EmrE Multidrug resistance efflux transporter EmrE 92
Riboflavin synthase domain-like Ferredoxin reductase-like, C-terminal NADP-linked domain 97
PYP-like sensor domain (PAS domain) PYP-like sensor domain (PAS domain) 99
PYP-like sensor domain (PAS domain) Nucleotide cyclase 96
CheY-like Nucleotide cyclase 94
TPR-like TPR-like 97
PreATP-grasp domain Glutathione synthetase ATP-binding domain-like 95
ACT-like ACT-like 95
Sm-like ribonucleoproteins Mechanosensitive channel protein MscS (YggB), C-terminal domain 94
P-loop containing nucleoside triphosphate hydrolases Translation proteins 96
lambda repressor-like DNA-binding domains Periplasmic binding protein-like I 81
ABC transporter transmembrane region P-loop containing nucleoside triphosphate hydrolases 82
Mechanosensitive channel protein MscS (YggB), transmembrane region Mechanosensitive channel protein MscS (YggB), C-terminal domain 73
CheY-like CheY-like 75
Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) 74
CheY-like Homeodomain-like 72
Zn-dependent exopeptidases Bacterial exopeptidase dimerisation domain 71
Enolase N-terminal domain-like Enolase C-terminal domain-like 71
Aminoacid dehydrogenase-like, N-terminal domain NAD(P)-binding Rossmann-fold domains 73
Thiolase-like Thiolase-like 72
Composite domain of metallo-dependent hydrolases Metallo-dependent hydrolases 74
Mechanosensitive channel protein MscS (YggB), transmembrane region Sm-like ribonucleoproteins 73
MurD-like peptide ligases, catalytic domain MurD-like peptide ligases, peptide-binding domain 63
Nucleotidylyl transferase Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 66
P-loop containing nucleoside triphosphate hydrolases EF-G C-terminal domain-like 64
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Histidine-containing phosphotransfer domain, HPT domain 66
Formate/glycerate dehydrogenase catalytic domain-like NAD(P)-binding Rossmann-fold domains 63
Homodimeric domain of signal transducing histidine kinase Histidine-containing phosphotransfer domain, HPT domain 66
PYP-like sensor domain (PAS domain) EAL domain-like 64
CheY-like P-loop containing nucleoside triphosphate hydrolases 61
Alpha-L RNA-binding motif Pseudouridine synthase 51
Translation proteins EF-G C-terminal domain-like 53
P-loop containing nucleoside triphosphate hydrolases TPR-like 53
Glutathione synthetase ATP-binding domain-like Rudiment single hybrid motif 52
Nucleic acid-binding proteins Nucleic acid-binding proteins 54
Galactose-binding domain-like beta-Galactosidase/glucuronidase domain 55
PreATP-grasp domain Rudiment single hybrid motif 52
CheY-like Histidine-containing phosphotransfer domain, HPT domain 55
DPP6 N-terminal domain-like alpha/beta-Hydrolases 53
Ribosomal protein S5 domain 2-like P-loop containing nucleoside triphosphate hydrolases 54
beta-Galactosidase/glucuronidase domain (Trans)glycosidases 55
Galactose-binding domain-like (Trans)glycosidases 55
Thiamin diphosphate-binding fold (THDP-binding) TK C-terminal domain-like 53
GAF domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 55
EspE N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 43
ClpP/crotonase ClpP/crotonase 43
GAF domain-like Homodimeric domain of signal transducing histidine kinase 44
E set domains Glycosyl hydrolase domain 43
GAF domain-like GAF domain-like 43
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Ribosomal protein S5 domain 2-like 44
E set domains (Trans)glycosidases 43
Galactose mutarotase-like (Trans)glycosidases 44
ISP domain Bet v1-like 41
EF-G C-terminal domain-like EF-G C-terminal domain-like 42
Class I glutamine amidotransferase-like Homeodomain-like 41
CheY-like EAL domain-like 42
HAMP domain-like Homodimeric domain of signal transducing histidine kinase 42
FAD/NAD(P)-binding domain FAD/NAD-linked reductases, dimerisation (C-terminal) domain 42
2Fe-2S ferredoxin-like CO dehydrogenase ISP C-domain like 42
CheY-like TPR-like 41
FAD-binding/transporter-associated domain-like FAD-linked oxidases, C-terminal domain 42
Nucleotide-diphospho-sugar transferases Trimeric LpxA-like enzymes 41
Nucleotide cyclase GAF domain-like 43
"Winged helix" DNA-binding domain Chorismate lyase-like 41
6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 42
N-terminal domain of alpha and beta subunits of F1 ATP synthase P-loop containing nucleoside triphosphate hydrolases 42
"Winged helix" DNA-binding domain GAF domain-like 41
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex CoA-dependent acyltransferases 43
Nucleic acid-binding proteins Class II aaRS and biotin synthetases 43
P-loop containing nucleoside triphosphate hydrolases C-terminal domain of alpha and beta subunits of F1 ATP synthase 42
HAMP domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 42
N-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase 42
Single hybrid motif Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 43
Single hybrid motif CoA-dependent acyltransferases 43
"Winged helix" DNA-binding domain "Winged helix" DNA-binding domain 42
PLP-binding barrel Alanine racemase C-terminal domain-like 42
P-loop containing nucleoside triphosphate hydrolases EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 32
beta-Galactosidase/glucuronidase domain beta-Galactosidase/glucuronidase domain 33
HAMP domain-like Nucleotide cyclase 31
Leukotriene A4 hydrolase N-terminal domain Metalloproteases ("zincins"), catalytic domain 32
ValRS/IleRS/LeuRS editing domain Nucleotidylyl transferase 33
TPR-like Nucleotide cyclase 32
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 33
Cytochrome c Cytochrome c 32
cAMP-binding domain-like "Winged helix" DNA-binding domain 31
Molybdenum cofactor-binding domain Molybdenum cofactor-binding domain 31
Triger factor/SurA peptide-binding domain-like FKBP-like 33
HD-domain/PDEase-like ACT-like 32
HD-domain/PDEase-like Nucleotidyltransferase 32
2Fe-2S ferredoxin-like Ferredoxin reductase-like, C-terminal NADP-linked domain 33
Formate dehydrogenase/DMSO reductase, domains 1-3 ADC-like 32
Homeodomain-like SIS domain 31
Nucleic acid-binding proteins Translation proteins SH3-like domain 32
GAF domain-like P-loop containing nucleoside triphosphate hydrolases 33
Calcium ATPase, transmembrane domain M HAD-like 33
Phospholipase D/nuclease Phospholipase D/nuclease 33
Thioesterase/thiol ester dehydrase-isomerase Thioesterase/thiol ester dehydrase-isomerase 31
PYP-like sensor domain (PAS domain) GAF domain-like 33
RmlC-like cupins Homeodomain-like 32
ValRS/IleRS/LeuRS editing domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 33
Class II aaRS and biotin synthetases Class II aaRS ABD-related 33
Cation efflux protein transmembrane domain-like Cation efflux protein cytoplasmic domain-like 32
Ribosomal protein S5 domain 2-like GHMP Kinase, C-terminal domain 31
Nucleotidyltransferase ACT-like 32
P-loop containing nucleoside triphosphate hydrolases MOP-like 31
(Trans)glycosidases Invasin/intimin cell-adhesion fragments 33
Cryptochrome/photolyase, N-terminal domain Cryptochrome/photolyase FAD-binding domain 31
2Fe-2S ferredoxin-like Riboflavin synthase domain-like 33
ClpP/crotonase 6-phosphogluconate dehydrogenase C-terminal domain-like 31
PurM N-terminal domain-like PurM C-terminal domain-like 32
Adenine nucleotide alpha hydrolases-like Adenine nucleotide alpha hydrolases-like 31
GroES-like GroES-like 31
Creatinase/prolidase N-terminal domain Creatinase/aminopeptidase 31
MurCD N-terminal domain MurD-like peptide ligases, peptide-binding domain 31
Integrin alpha N-terminal domain Integrin alpha N-terminal domain 32
Pectin lyase-like Pectin lyase-like 32
Single hybrid motif Single hybrid motif 32
CheY-like HD-domain/PDEase-like 32
Calcium ATPase, transduction domain A HAD-like 33
P-loop containing nucleoside triphosphate hydrolases post-AAA+ oligomerization domain-like 32
Calcium ATPase, transduction domain A Calcium ATPase, transmembrane domain M 33
Translation proteins EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 32
Phosphohistidine domain Phosphoenolpyruvate/pyruvate domain 32
Aconitase iron-sulfur domain LeuD/IlvD-like 33
Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like 33
Phosphoglucomutase, first 3 domains Phosphoglucomutase, C-terminal domain 32
PA domain Zn-dependent exopeptidases 31
ClpP/crotonase NAD(P)-binding Rossmann-fold domains 31
MurCD N-terminal domain MurD-like peptide ligases, catalytic domain 31
Phosphoglucomutase, first 3 domains Phosphoglucomutase, first 3 domains 32
HAMP domain-like EAL domain-like 31
RuvA domain 2-like Nucleic acid-binding proteins 33
Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 32
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 22
Aldolase 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 22
Thiamin diphosphate-binding fold (THDP-binding) DHS-like NAD/FAD-binding domain 21
beta-Galactosidase/glucuronidase domain Galactose mutarotase-like 22
Carbamate kinase-like ACT-like 22
Glutathione synthetase ATP-binding domain-like Single hybrid motif 21
PilZ domain-like PilZ domain-like 22
Ribosomal protein S5 domain 2-like Ribonuclease PH domain 2-like 22
FAD-binding/transporter-associated domain-like alpha-helical ferredoxin 21
Type II DNA topoisomerase GyrA/ParC C-terminal domain-like 22
Glycerol-3-phosphate (1)-acyltransferase Acyl-CoA N-acyltransferases (Nat) 21
Glutathione synthetase ATP-binding domain-like Phosphohistidine domain 21
CheC-like CheY-like 22
FAD-linked oxidases, C-terminal domain alpha-helical ferredoxin 21
Carbamate kinase-like PUA domain-like 21
S-adenosyl-L-methionine-dependent methyltransferases S-adenosyl-L-methionine-dependent methyltransferases 22
Actin-like ATPase domain Heat shock protein 70kD (HSP70), peptide-binding domain 21
MetI-like MetI-like 21
FMN-linked oxidoreductases FAD/NAD(P)-binding domain 22
HSP40/DnaJ peptide-binding domain HSP40/DnaJ peptide-binding domain 22
(Trans)glycosidases Beta-D-glucan exohydrolase, C-terminal domain 21
PYP-like sensor domain (PAS domain) Histidine-containing phosphotransfer domain, HPT domain 22
HMA, heavy metal-associated domain Calcium ATPase, transduction domain A 22
C-terminal effector domain of the bipartite response regulators TPR-like 22
Aldolase post-HMGL domain-like 22
HMA, heavy metal-associated domain HAD-like 22
TSP type-3 repeat OmpA-like 21
GAF domain-like EAL domain-like 21
FAD/NAD(P)-binding domain FAD/NAD(P)-binding domain 22
Ribonuclease H-like DNA/RNA polymerases 22
GreA transcript cleavage protein, N-terminal domain FKBP-like 21
Galactose mutarotase-like Glycosyl hydrolase domain 22
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 21
PreATP-grasp domain Single hybrid motif 21
Adenine nucleotide alpha hydrolases-like DHS-like NAD/FAD-binding domain 21
LuxS/MPP-like metallohydrolase LuxS/MPP-like metallohydrolase 22
Rudiment single hybrid motif Single hybrid motif 21
Chaperone J-domain HSP40/DnaJ peptide-binding domain 22
Dimeric alpha+beta barrel Dimeric alpha+beta barrel 21
PP2C-like Protein kinase-like (PK-like) 21
MgtE N-terminal domain-like CBS-domain pair 21
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Adenine nucleotide alpha hydrolases-like 21
HlyD-like secretion proteins HlyD-like secretion proteins 21
Cytochrome c oxidase subunit II-like, transmembrane region Cupredoxins 22
Starch-binding domain-like Porins 22
NagB/RpiA/CoA transferase-like NagB/RpiA/CoA transferase-like 22
Nitrite/Sulfite reductase N-terminal domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 22
OMPA-like TSP type-3 repeat 21
cAMP-binding domain-like CBS-domain pair 21
CBS-domain pair FAD-binding/transporter-associated domain-like 21
PYP-like sensor domain (PAS domain) Homeodomain-like 22
TGS-like ACT-like 21
P-loop containing nucleoside triphosphate hydrolases "Winged helix" DNA-binding domain 22
P-loop containing nucleoside triphosphate hydrolases Glucocorticoid receptor-like (DNA-binding domain) 22
HD-domain/PDEase-like TGS-like 21
CBS-domain pair MgtE membrane domain-like 21
Galactose-binding domain-like SGNH hydrolase 21
Zn-dependent exopeptidases Class I glutamine amidotransferase-like 22
MurE/MurF N-terminal domain MurD-like peptide ligases, catalytic domain 21
ThrRS/AlaRS common domain Class II aaRS and biotin synthetases 22
Folate-binding domain Aminomethyltransferase beta-barrel domain 21
MurE/MurF N-terminal domain MurD-like peptide ligases, peptide-binding domain 21
Diaminopimelate epimerase-like Diaminopimelate epimerase-like 21
HMA, heavy metal-associated domain Calcium ATPase, transmembrane domain M 22
NAD(P)-binding Rossmann-fold domains TrkA C-terminal domain-like 22
GAF domain-like CheY-like 22
Actin-like ATPase domain Heat shock protein 70kD (HSP70), C-terminal subdomain 21
Galactose-binding domain-like Galactose mutarotase-like 22
Nucleotidyltransferase Poly A polymerase C-terminal region-like 22
TrkA C-terminal domain-like TrkA C-terminal domain-like 22
Calcium-dependent phosphotriesterase PYP-like sensor domain (PAS domain) 22
Nucleotidyltransferase Nucleotidyltransferase substrate binding subunit/domain 22
OMPA-like OmpA-like 21
Actin-like ATPase domain HD-domain/PDEase-like 21
CorA soluble domain-like Magnesium transport protein CorA, transmembrane region 21
PDZ domain-like PDZ domain-like 22
MgtE N-terminal domain-like MgtE membrane domain-like 21
C-terminal effector domain of the bipartite response regulators P-loop containing nucleoside triphosphate hydrolases 22
EF-G C-terminal domain-like Ribosomal protein S5 domain 2-like 21
Zinc beta-ribbon Zinc beta-ribbon 22
Double Clp-N motif P-loop containing nucleoside triphosphate hydrolases 22
P-loop containing nucleoside triphosphate hydrolases Class I glutamine amidotransferase-like 22
E set domains E set domains 22
PYP-like sensor domain (PAS domain) Methyl-accepting chemotaxis protein (MCP) signaling domain 22
Arabinanase/levansucrase/invertase Concanavalin A-like lectins/glucanases 21
PDZ domain-like ClpP/crotonase 21
Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 22
Calcium-dependent phosphotriesterase Nucleotide cyclase 22
Trypsin-like serine proteases PDZ domain-like 22
DNA ligase/mRNA capping enzyme, catalytic domain Nucleic acid-binding proteins 22
Nucleic acid-binding proteins P-loop containing nucleoside triphosphate hydrolases 22
Nucleotide-binding domain FAD-linked reductases, C-terminal domain 21
EAL domain-like HD-domain/PDEase-like 21
P-loop containing nucleoside triphosphate hydrolases Restriction endonuclease-like 22
Ribosomal protein S5 domain 2-like Type II DNA topoisomerase 22
IlvD/EDD N-terminal domain-like LeuD/IlvD-like 21
Penicillin binding protein dimerisation domain beta-lactamase/transpeptidase-like 21
Lysozyme-like beta-lactamase/transpeptidase-like 22
Glutathione synthetase ATP-binding domain-like Phosphoenolpyruvate/pyruvate domain 21
Invasin/intimin cell-adhesion fragments Invasin/intimin cell-adhesion fragments 22
ACT-like NAD(P)-binding Rossmann-fold domains 22
Nucleotidyltransferase TGS-like 21
Heat shock protein 70kD (HSP70), peptide-binding domain Heat shock protein 70kD (HSP70), C-terminal subdomain 21
tRNA-binding arm Class II aaRS and biotin synthetases 21
Regulatory protein AraC Homeodomain-like 21
Calcium-dependent phosphotriesterase EAL domain-like 22
Translation proteins Ribosomal protein S5 domain 2-like 21
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Type II DNA topoisomerase 22
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases tRNA-binding arm 11
P-loop containing nucleoside triphosphate hydrolases Zn-binding ribosomal proteins 11
ACT-like PYP-like sensor domain (PAS domain) 11
Translation proteins Translation proteins 11
P-loop containing nucleoside triphosphate hydrolases CarD-like 11
C-terminal UvrC-binding domain of UvrB RuvA domain 2-like 11
Ada DNA repair protein, N-terminal domain (N-Ada 10) DNA-glycosylase 11
Periplasmic binding protein-like II GlnB-like 11
Heme-dependent catalase-like Class I glutamine amidotransferase-like 11
S-adenosyl-L-methionine-dependent methyltransferases Putative methyltransferase TM0872, insert domain 11
Tex N-terminal region-like Ribonuclease H-like 11
P-loop containing nucleoside triphosphate hydrolases UDP-Glycosyltransferase/glycogen phosphorylase 11
Acyl-CoA N-acyltransferases (Nat) Carbon-nitrogen hydrolase 11
DnaJ/Hsp40 cysteine-rich domain HSP40/DnaJ peptide-binding domain 11
Pili subunits GspK insert domain-like 11
Homeodomain-like DNA-glycosylase 11
PUA domain-like Ribosomal protein S5 domain 2-like 11
Putative DNA-binding domain P-loop containing nucleoside triphosphate hydrolases 11
Translation initiation factor IF3, N-terminal domain Translation initiation factor IF3, C-terminal domain 11
Thioredoxin-like FAD/NAD(P)-binding domain 11
Aldolase AFP III-like domain 11
Calcium-dependent phosphotriesterase YVTN repeat-like/Quinoprotein amine dehydrogenase 11
Peptidase/esterase 'gauge' domain alpha/beta-Hydrolases 11
post-HMGL domain-like 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 11
N-acetylmuramoyl-L-alanine amidase-like beta-lactamase/transpeptidase-like 11
Chorismate mutase II 6-phosphogluconate dehydrogenase C-terminal domain-like 11
(Trans)glycosidases Class I glutamine amidotransferase-like 11
Metal cation-transporting ATPase, ATP-binding domain N Calcium ATPase, transmembrane domain M 11
RuvA domain 2-like BRCT domain 11
DPP6 N-terminal domain-like DPP6 N-terminal domain-like 11
P-loop containing nucleoside triphosphate hydrolases TRCF domain-like 11
His-Me finger endonucleases DNase I-like 11
Lysozyme-like LysM domain 11
Metallo-dependent phosphatases 5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain 11
PUA domain-like alpha/beta knot 11
TSP type-3 repeat Carbohydrate binding domain 11
Homo-oligomeric flavin-containing Cys decarboxylases, HFCD CoaB-like 11
Obg GTP-binding protein N-terminal domain P-loop containing nucleoside triphosphate hydrolases 11
Riboflavin synthase domain-like Riboflavin synthase domain-like 11
P-loop containing nucleoside triphosphate hydrolases TGS-like 11
Fumarylacetoacetate hydrolase, FAH, N-terminal domain FAH 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) Translation proteins 11
Class I glutamine amidotransferase-like Adenine nucleotide alpha hydrolases-like 11
Starch-binding domain-like E set domains 11
"Winged helix" DNA-binding domain C-terminal domain of transcriptional repressors 11
Activating enzymes of the ubiquitin-like proteins Rhodanese/Cell cycle control phosphatase 11
Coiled-coil domain of nucleotide exchange factor GrpE Head domain of nucleotide exchange factor GrpE 11
Acyl-CoA N-acyltransferases (Nat) Thioesterase/thiol ester dehydrase-isomerase 11
Prokaryotic type KH domain (KH-domain type II) Rad51 N-terminal domain-like 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Alpha subunit of glutamate synthase, C-terminal domain 11
Nucleic acid-binding proteins PheT/TilS domain 11
CBS-domain pair Inosine monophosphate dehydrogenase (IMPDH) 11
GspK insert domain-like GspK insert domain-like 11
Galactose mutarotase-like Six-hairpin glycosidases 11
Epsilon subunit of F1F0-ATP synthase N-terminal domain Epsilon subunit of F1F0-ATP synthase C-terminal domain 11
ThrRS/AlaRS common domain Class II aaRS ABD-related 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase DNA mismatch repair protein MutL 11
Ribosomal protein L6 Ribosomal protein L6 11
P-loop containing nucleoside triphosphate hydrolases TrpR-like 11
Ribokinase-like Thiamin phosphate synthase 11
FAD/NAD(P)-binding domain Nitrite/Sulfite reductase N-terminal domain-like 11
Nucleic acid-binding proteins Anticodon-binding domain of PheRS 11
Purple acid phosphatase, N-terminal domain Metallo-dependent phosphatases 11
FAD-binding/transporter-associated domain-like CO dehydrogenase flavoprotein C-terminal domain-like 11
Class I glutamine amidotransferase-like GMP synthetase C-terminal dimerisation domain 11
P-loop containing nucleoside triphosphate hydrolases HprK N-terminal domain-like 11
FMN-binding split barrel Riboflavin synthase domain-like 11
GAF domain-like Homeodomain-like 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheW-like 11
DPP6 N-terminal domain-like Metallo-dependent hydrolases 11
ACT-like Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain II 11
Enolase C-terminal domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 11
Insert subdomain of RNA polymerase alpha subunit RBP11-like subunits of RNA polymerase 11
Nucleotidylyl transferase Riboflavin kinase-like 11
PA domain Type I dockerin domain 11
C-terminal effector domain of the bipartite response regulators DPP6 N-terminal domain-like 11
Class I glutamine amidotransferase-like LD-carboxypeptidase A C-terminal domain-like 11
Cytochrome c RNI-like 11
Soluble quinoprotein glucose dehydrogenase Nucleotide cyclase 11
Aconitase B, N-terminal domain LeuD/IlvD-like 11
Carbamate kinase-like Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 11
Chorismate mutase II ACT-like 11
dsRNA-binding domain-like Ribosomal protein S5 domain 2-like 11
Ribonuclease H-like HRDC-like 11
Nucleic acid-binding proteins Putative DNA-binding domain 11
P-loop containing nucleoside triphosphate hydrolases Pre-protein crosslinking domain of SecA 11
Metalloproteases ("zincins"), catalytic domain ARM repeat 11
FKBP-like FKBP-like 11
Nudix "Winged helix" DNA-binding domain 11
Nucleic acid-binding proteins Prokaryotic type KH domain (KH-domain type II) 11
TPR-like LysM domain 11
Invasin/intimin cell-adhesion fragments Type I dockerin domain 11
P-loop containing nucleoside triphosphate hydrolases C-terminal UvrC-binding domain of UvrB 11
Calcium ATPase, transduction domain A Metal cation-transporting ATPase, ATP-binding domain N 11
Nucleic acid-binding proteins Rad51 N-terminal domain-like 11
Ligand-binding domain in the NO signalling and Golgi transport P-loop containing nucleoside triphosphate hydrolases 11
Nucleic acid-binding proteins GAD domain-like 11
Voltage-gated potassium channels NAD(P)-binding Rossmann-fold domains 11
NAD(P)-binding Rossmann-fold domains Succinyl-CoA synthetase domains 11
NAD(P)-binding Rossmann-fold domains LDH C-terminal domain-like 11
Glutamyl tRNA-reductase catalytic, N-terminal domain Glutamyl tRNA-reductase dimerization domain 11
Ada DNA repair protein, N-terminal domain (N-Ada 10) Homeodomain-like 11
PHP14-like Phospholipase D/nuclease 11
Carbamate kinase-like Acyl-CoA N-acyltransferases (Nat) 11
GroEL-intermediate domain like GroEL apical domain-like 11
Glutathione synthetase ATP-binding domain-like Methylglyoxal synthase-like 11
Fe,Mn superoxide dismutase (SOD), N-terminal domain Fe,Mn superoxide dismutase (SOD), C-terminal domain 11
post-HMGL domain-like Single hybrid motif 11
PLP-dependent transferases SufE/NifU 11
FGAM synthase PurL, linker domain PurM N-terminal domain-like 11
PGBD-like beta-lactamase/transpeptidase-like 11
Galactose oxidase, central domain Kelch motif 11
TGS-like Class II aaRS and biotin synthetases 11
Thiol:disulfide interchange protein DsbD, N-terminal domain (DsbD-alpha) Thioredoxin-like 11
Galactose-binding domain-like Invasin/intimin cell-adhesion fragments 11
Ribonuclease PH domain 2-like Ribonuclease PH domain 2-like 11
Chorismate mutase II NAD(P)-binding Rossmann-fold domains 11
Zinc beta-ribbon Prokaryotic SH3-related domain 11
YVTN repeat-like/Quinoprotein amine dehydrogenase Nucleotide cyclase 11
Ligand-binding domain in the NO signalling and Golgi transport Homeodomain-like 11
DNA repair protein MutS, domain I P-loop containing nucleoside triphosphate hydrolases 11
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphohistidine domain 11
PurM C-terminal domain-like PurM C-terminal domain-like 11
P-loop containing nucleoside triphosphate hydrolases Signal peptide-binding domain 11
TATA-box binding protein-like DNA-glycosylase 11
Quinoprotein alcohol dehydrogenase-like Homeodomain-like 11
Calcium-dependent phosphotriesterase Calcium-dependent phosphotriesterase 11
PA domain Subtilisin-like 11
Ribonuclease H-like Nucleic acid-binding proteins 11
MalF N-terminal region-like MetI-like 11
NagB/RpiA/CoA transferase-like D-ribose-5-phosphate isomerase (RpiA), lid domain 11
6-phosphogluconate dehydrogenase C-terminal domain-like UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 11
"Winged helix" DNA-binding domain Actin-like ATPase domain 11
DNA repair protein MutS, domain II P-loop containing nucleoside triphosphate hydrolases 11
L domain-like Protein kinase-like (PK-like) 11
P-loop containing nucleoside triphosphate hydrolases RecA protein, C-terminal domain 11
Galactose mutarotase-like E set domains 11
Heme-dependent peroxidases Heme-dependent peroxidases 11
YbaK/ProRS associated domain Class II aaRS ABD-related 11
P-loop containing nucleoside triphosphate hydrolases Helical scaffold and wing domains of SecA 11
Cytidine deaminase-like Dihydrofolate reductase-like 11
(Phosphotyrosine protein) phosphatases II NAD kinase/diacylglycerol kinase-like 11
MFS general substrate transporter MFS general substrate transporter 11
FAD-binding/transporter-associated domain-like Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain 11
Leukotriene A4 hydrolase N-terminal domain ARM repeat 11
Zinc beta-ribbon DNA primase DnaG, C-terminal domain 11
Translation proteins Initiation factor IF2/eIF5b, domain 3 11
ALDH-like ALDH-like 11
Carboxypeptidase regulatory domain-like Porins 11
Nucleic acid-binding proteins BRCT domain 11
Ribbon-helix-helix Replication modulator SeqA, C-terminal DNA-binding domain 11
Methylglyoxal synthase-like Cytidine deaminase-like 11
Concanavalin A-like lectins/glucanases Concanavalin A-like lectins/glucanases 11
Nucleic acid-binding proteins DNA helicase RuvA subunit, C-terminal domain 11
DinB/YfiT-like putative metalloenzymes C-type lectin-like 11
PreATP-grasp domain Carbamoyl phosphate synthetase, large subunit connection domain 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Homeodomain-like 11
HRDC-like HRDC-like 11
GAF domain-like Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain 11
"Winged helix" DNA-binding domain LexA/Signal peptidase 11
FabD/lysophospholipase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 11
Periplasmic binding protein-like I Homeodomain-like 11
YjeF N-terminal domain-like Ribokinase-like 11
Chaperone J-domain HSC20 (HSCB), C-terminal oligomerisation domain 11
NAD(P)-binding Rossmann-fold domains Siroheme synthase middle domains-like 11
YVTN repeat-like/Quinoprotein amine dehydrogenase PYP-like sensor domain (PAS domain) 11
RmlC-like cupins RmlC-like cupins 11
Calcium-dependent phosphotriesterase Histidine-containing phosphotransfer domain, HPT domain 11
GIY-YIG endonuclease RuvA domain 2-like 11
PKD domain PKD domain 11
Carbamoyl phosphate synthetase, small subunit N-terminal domain Class I glutamine amidotransferase-like 11
Arabinanase/levansucrase/invertase Galactose-binding domain-like 11
Chemotaxis receptor methyltransferase CheR, N-terminal domain S-adenosyl-L-methionine-dependent methyltransferases 11
Soluble quinoprotein glucose dehydrogenase PYP-like sensor domain (PAS domain) 11
FliG FliG 11
H-NS histone-like proteins H-NS histone-like proteins 11
Ribonuclease H-like RuvA domain 2-like 11
Nucleotide-diphospho-sugar transferases UDP-Glycosyltransferase/glycogen phosphorylase 11
Zinc beta-ribbon DNA primase core 11
Ribulose-phoshate binding barrel Ribulose-phoshate binding barrel 11
Lysozyme-like PGBD-like 11
beta-lactamase/transpeptidase-like Penicillin-binding protein associated domain 11
Methylated DNA-protein cysteine methyltransferase domain Methylated DNA-protein cysteine methyltransferase, C-terminal domain 11
PEP carboxykinase N-terminal domain PEP carboxykinase-like 11
Oxidoreductase molybdopterin-binding domain E set domains 11
L30e-like alpha/beta knot 11
Translation proteins PRC-barrel domain 11
Glutathione synthetase ATP-binding domain-like Succinyl-CoA synthetase domains 11
CO dehydrogenase ISP C-domain like CO dehydrogenase flavoprotein C-terminal domain-like 11
FGAM synthase PurL, linker domain PurM C-terminal domain-like 11
(Trans)glycosidases Type I dockerin domain 11
ACT-like P-loop containing nucleoside triphosphate hydrolases 11
Rho N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) PRTase-like 11
FAD/NAD(P)-binding domain 4Fe-4S ferredoxins 11
Aconitase B, N-terminal domain Aconitase iron-sulfur domain 11
Trigger factor ribosome-binding domain FKBP-like 11
PurM N-terminal domain-like PurM N-terminal domain-like 11
RuvA domain 2-like JAB1/MPN domain 11
Flavoproteins Ferredoxin reductase-like, C-terminal NADP-linked domain 11
DNA/RNA polymerases Lesion bypass DNA polymerase (Y-family), little finger domain 11
Nucleotidyltransferase substrate binding subunit/domain Nucleotidyltransferase substrate binding subunit/domain 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase HSP90 C-terminal domain 11
Siroheme synthase middle domains-like Tetrapyrrole methylase 11
Phosphoenolpyruvate/pyruvate domain PK C-terminal domain-like 11
CO dehydrogenase ISP C-domain like FAD-binding/transporter-associated domain-like 11
NagB/RpiA/CoA transferase-like Acyl-CoA N-acyltransferases (Nat) 11
Nqo1 FMN-binding domain-like alpha-helical ferredoxin 11
vWA-like Quinoprotein alcohol dehydrogenase-like 11
PIN domain-like 5' to 3' exonuclease, C-terminal subdomain 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) ThrRS/AlaRS common domain 11
CBD9-like Homodimeric domain of signal transducing histidine kinase 11
Homodimeric domain of signal transducing histidine kinase Homeodomain-like 11
DNA-glycosylase Nudix 11
PreATP-grasp domain Methylglyoxal synthase-like 11
Nitrite/Sulfite reductase N-terminal domain-like Nitrite/Sulfite reductase N-terminal domain-like 11
TolB, N-terminal domain Tricorn protease N-terminal domain 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
P-loop containing nucleoside triphosphate hydrolases HRDC-like 11
HAD-like Ribosomal protein S5 domain 2-like 11
Quinoprotein alcohol dehydrogenase-like Homodimeric domain of signal transducing histidine kinase 11
N-terminal domain of bifunctional PutA protein FAD-linked oxidoreductase 11
FMN-linked oxidoreductases Alpha subunit of glutamate synthase, C-terminal domain 11
PPK N-terminal domain-like Phospholipase D/nuclease 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
Starch-binding domain-like Glycosyl hydrolase domain 11
Tubulin nucleotide-binding domain-like Tubulin C-terminal domain-like 11
PIN domain-like P-loop containing nucleoside triphosphate hydrolases 11
DNA primase core DNA primase DnaG, C-terminal domain 11
HIT-like HIT-like 11
Ribosomal protein S5 domain 2-like HSP90 C-terminal domain 11
CheW-like CheY-like 11
Formate/glycerate dehydrogenase catalytic domain-like ACT-like 11
Nucleotidylyl transferase Ribosomal protein L25-like 11
Transmembrane di-heme cytochromes a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 11
GAF domain-like Phosphoenolpyruvate/pyruvate domain 11
His-Me finger endonucleases Lamin A/C globular tail domain 11
FMN-binding split barrel Ferredoxin reductase-like, C-terminal NADP-linked domain 11
Trigger factor ribosome-binding domain Triger factor/SurA peptide-binding domain-like 11
Class II aaRS and biotin synthetases Anticodon-binding domain of PheRS 11
PYP-like sensor domain (PAS domain) P-loop containing nucleoside triphosphate hydrolases 11
YrdC/RibB RibA-like 11
YVTN repeat-like/Quinoprotein amine dehydrogenase EAL domain-like 11
NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains 11
Single hybrid motif ClpP/crotonase 11
PIN domain-like DNA/RNA polymerases 11
HD-domain/PDEase-like Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
Molybdenum cofactor biosynthesis proteins MoeA C-terminal domain-like 11
Prokaryotic type I DNA topoisomerase Zinc beta-ribbon 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) FMN-linked oxidoreductases 11
Rho N-terminal domain-like Nucleic acid-binding proteins 11
Nitrite and sulphite reductase 4Fe-4S domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 11
Zn-dependent exopeptidases Fibronectin type III 11
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphoenolpyruvate/pyruvate domain 11
Class II aaRS and biotin synthetases GAD domain-like 11
Aspartate/glutamate racemase Aspartate/glutamate racemase 11
PK beta-barrel domain-like PK C-terminal domain-like 11
YajQ-like YajQ-like 11
Chaperone J-domain DnaJ/Hsp40 cysteine-rich domain 11
Spermadhesin, CUB domain Concanavalin A-like lectins/glucanases 11
(Trans)glycosidases Carbohydrate binding domain 11
Aldolase Single hybrid motif 11
5' to 3' exonuclease, C-terminal subdomain DNA/RNA polymerases 11
Sensory domain-like CheY-like 11
Cytochrome c Calcium-dependent phosphotriesterase 11
Macro domain-like Zn-dependent exopeptidases 11
Nucleotide-binding domain FAD/NAD(P)-binding domain 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Nucleotidylyl transferase 11
Tryptophan synthase beta subunit-like PLP-dependent enzymes ACT-like 11
Eukaryotic type KH-domain (KH-domain type I) Nucleic acid-binding proteins 11
HisI-like all-alpha NTP pyrophosphatases 11
Subtilisin-like Cadherin-like 11
ValRS/IleRS/LeuRS editing domain tRNA-binding arm 11
HAMP domain-like CheY-like 11
PheT/TilS domain Putative DNA-binding domain 11
Adenine nucleotide alpha hydrolases-like MesJ substrate recognition domain-like 11
Metalloproteases ("zincins"), catalytic domain PDZ domain-like 11
DNA repair protein MutS, domain III P-loop containing nucleoside triphosphate hydrolases 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Nucleic acid-binding proteins 11
PheT/TilS domain Class II aaRS and biotin synthetases 11
Chorismate mutase II Periplasmic binding protein-like II 11
Protein kinase-like (PK-like) TPR-like 11
FAD-linked oxidoreductase ALDH-like 11
Ribosomal L11/L12e N-terminal domain Ribosomal protein L11, C-terminal domain 11
PLP-dependent transferases PLP-dependent transferases 11
Soluble quinoprotein glucose dehydrogenase Calcium-dependent phosphotriesterase 11
Cytochrome c oxidase subunit II-like, transmembrane region Cytochrome c 11
Periplasmic binding protein-like II Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain 11
alpha/beta-Hydrolases Galactose-binding domain-like 11
GAF domain-like EspE N-terminal domain-like 11
Nudix Nudix 11
Starch-binding domain-like PHP domain-like 11
(Trans)glycosidases TSP type-3 repeat 11
GIY-YIG endonuclease C-terminal UvrC-binding domain of UvrB 11
Globin-like Ferredoxin reductase-like, C-terminal NADP-linked domain 11
PRC-barrel domain PRC-barrel domain 11
alpha/beta-Hydrolases alpha/beta-Hydrolases 11
Methyl-accepting chemotaxis protein (MCP) signaling domain ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
C-type lectin-like S-adenosyl-L-methionine-dependent methyltransferases 11
NAD-binding domain of HMG-CoA reductase Substrate-binding domain of HMG-CoA reductase 11
PurM N-terminal domain-like Class I glutamine amidotransferase-like 11
GroEL equatorial domain-like GroEL apical domain-like 11
Class II aaRS and biotin synthetases C-terminal domain of transcriptional repressors 11
Hsp33 domain HSP33 redox switch-like 11
Class II aaRS and biotin synthetases Translation proteins 11
Nucleic acid-binding proteins ArfGap/RecO-like zinc finger 11
PurS-like PurM C-terminal domain-like 11
DNA clamp DNA clamp 11
Translation proteins ThrRS/AlaRS common domain 11
Calcium-dependent phosphotriesterase CheY-like 11
Ribonuclease PH domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
gp5 N-terminal domain-like Phage fibre proteins 11
TGS-like Class II aaRS ABD-related 11
Alkaline phosphatase-like Invasin/intimin cell-adhesion fragments 11
NAD(P)-binding Rossmann-fold domains UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 11
Glutathione synthetase ATP-binding domain-like Carbamoyl phosphate synthetase, large subunit connection domain 11
Carbamoyl phosphate synthetase, large subunit connection domain Methylglyoxal synthase-like 11
Cytochrome c Concanavalin A-like lectins/glucanases 11
PK beta-barrel domain-like Phosphoenolpyruvate/pyruvate domain 11
ACT-like Homeodomain-like 11
Nucleotidylyl transferase tRNA-binding arm 11
PreATP-grasp domain PreATP-grasp domain 11
Homeodomain-like TATA-box binding protein-like 11
S-adenosyl-L-methionine-dependent methyltransferases NAD(P)-binding Rossmann-fold domains 11
GroEL equatorial domain-like GroEL-intermediate domain like 11
P-loop containing nucleoside triphosphate hydrolases FtsH protease domain-like 11
Cupredoxins Cytochrome c 11
Periplasmic binding protein-like II ACT-like 11
Metal cation-transporting ATPase, ATP-binding domain N HAD-like 11
vWA-like TPR-like 11
CarD-like TRCF domain-like 11
Adenine nucleotide alpha hydrolases-like PheT/TilS domain 11
2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain Alkaline phosphatase-like 11
Nucleotidylyl transferase Alpha-L RNA-binding motif 11
TGS-like ThrRS/AlaRS common domain 11
Galactose-binding domain-like Galactose-binding domain-like 11
Subtilisin-like Type I dockerin domain 11
Sensory domain-like Homodimeric domain of signal transducing histidine kinase 11
FMN-linked oxidoreductases Nucleotide-binding domain 11
DsbC/DsbG N-terminal domain-like Thioredoxin-like 11
Putative DNA-binding domain CheY-like 11
Nucleotidyltransferase substrate binding subunit/domain HD-domain/PDEase-like 11
LysM domain LysM domain 11
RBP11-like subunits of RNA polymerase C-terminal domain of RNA polymerase alpha subunit 11
beta-Galactosidase/glucuronidase domain Invasin/intimin cell-adhesion fragments 11
PheT/TilS domain Anticodon-binding domain of PheRS 11
2Fe-2S ferredoxin-like FAD-binding/transporter-associated domain-like 11
Carbamate kinase-like NAD(P)-binding Rossmann-fold domains 11
Tex N-terminal region-like Nucleic acid-binding proteins 11
PIN domain-like Ribonuclease H-like 11
Pre-protein crosslinking domain of SecA Helical scaffold and wing domains of SecA 11
2Fe-2S ferredoxin-like CO dehydrogenase flavoprotein C-terminal domain-like 11
R1 subunit of ribonucleotide reductase, N-terminal domain PFL-like glycyl radical enzymes 11
Transcription factor NusA, N-terminal domain Nucleic acid-binding proteins 11
Quinoprotein alcohol dehydrogenase-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
PPK N-terminal domain-like PHP14-like 11
Periplasmic binding protein-like II Lysozyme-like 11
Adenine nucleotide alpha hydrolases-like Argininosuccinate synthetase, C-terminal domain 11
Nucleotide cyclase P-loop containing nucleoside triphosphate hydrolases 11
Putative DNA-binding domain Translation proteins 11
Glutamyl tRNA-reductase catalytic, N-terminal domain NAD(P)-binding Rossmann-fold domains 11
Radical SAM enzymes RuvA domain 2-like 11
Globin-like Riboflavin synthase domain-like 11
Quinoprotein alcohol dehydrogenase-like CheY-like 11
Ribosomal protein S5 domain 2-like DNA mismatch repair protein MutL 11
His-Me finger endonucleases Type I dockerin domain 11
Insert subdomain of RNA polymerase alpha subunit C-terminal domain of RNA polymerase alpha subunit 11
Prokaryotic type KH domain (KH-domain type II) Prokaryotic type KH domain (KH-domain type II) 11
P-loop containing nucleoside triphosphate hydrolases Initiation factor IF2/eIF5b, domain 3 11
Transcription factor NusA, N-terminal domain Prokaryotic type KH domain (KH-domain type II) 11
TPR-like Clavaminate synthase-like 11
P-loop containing nucleoside triphosphate hydrolases Isocitrate/Isopropylmalate dehydrogenase-like 11
HprK N-terminal domain-like Isocitrate/Isopropylmalate dehydrogenase-like 11
Histidine-containing phosphotransfer domain, HPT domain HD-domain/PDEase-like 11
ACT-like Formyltransferase 11
N-utilization substance G protein NusG, N-terminal domain Translation proteins SH3-like domain 11
Class II aaRS and biotin synthetases Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) 11
N-terminal domain of DnaB helicase P-loop containing nucleoside triphosphate hydrolases 11
Putative DNA-binding domain Class II aaRS and biotin synthetases 11
PurS-like PurM N-terminal domain-like 11
Pseudouridine synthase PUA domain-like 11
Thioredoxin-like Thioredoxin-like 11
DnaK suppressor protein DksA, alpha-hairpin domain Glucocorticoid receptor-like (DNA-binding domain) 11
Domain of the SRP/SRP receptor G-proteins P-loop containing nucleoside triphosphate hydrolases 11
Rhodanese/Cell cycle control phosphatase Rhodanese/Cell cycle control phosphatase 11
Bacterial muramidases Lysozyme-like 11
Glutathione synthetase ATP-binding domain-like Glutathione synthetase ATP-binding domain-like 11
Transcription factor NusA, N-terminal domain Rad51 N-terminal domain-like 11
Nucleotidyltransferase Nucleotidyltransferase 11
RuvA domain 2-like RuvA domain 2-like 11
Nucleotidylyl transferase Nucleic acid-binding proteins 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
NusB-like S-adenosyl-L-methionine-dependent methyltransferases 11
DNA topoisomerase I domain DNA breaking-rejoining enzymes 11
DNA ligase/mRNA capping enzyme, catalytic domain RuvA domain 2-like 11
Homeodomain-like Probable bacterial effector-binding domain 11
Prokaryotic type KH domain (KH-domain type II) Ribosomal protein S3 C-terminal domain 11
P-loop containing nucleoside triphosphate hydrolases Prokaryotic type KH domain (KH-domain type II) 11
Ribosomal protein S5 domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
N-acetylmuramoyl-L-alanine amidase-like PGBD-like 11
HesB-like domain Fe-S cluster assembly (FSCA) domain-like 11
NTF2-like Sec-C motif 11
DPP6 N-terminal domain-like Composite domain of metallo-dependent hydrolases 11
Sensory domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Glutamine synthetase, N-terminal domain Glutamine synthetase/guanido kinase 11
Nucleotidylyl transferase An anticodon-binding domain of class I aminoacyl-tRNA synthetases 11
Tex N-terminal region-like RuvA domain 2-like 11
Putative DNA-binding domain Anticodon-binding domain of PheRS 11
Calcium-dependent phosphotriesterase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Elongation factor Ts (EF-Ts), dimerisation domain Elongation factor Ts (EF-Ts), dimerisation domain 11
FGAM synthase PurL, linker domain Class I glutamine amidotransferase-like 11
TerB-like Chaperone J-domain 11
NAD(P)-binding Rossmann-fold domains Tetrapyrrole methylase 11
Ribosomal protein S5 domain 2-like Nucleic acid-binding proteins 11
alpha-helical ferredoxin Nucleotide-binding domain 11
P-loop containing nucleoside triphosphate hydrolases Acyl-CoA N-acyltransferases (Nat) 11
DNase I-like Type I dockerin domain 11
TPR-like HCP-like 11
2Fe-2S ferredoxin-like alpha-helical ferredoxin 11
Calcium-dependent phosphotriesterase Homodimeric domain of signal transducing histidine kinase 11
FAD/NAD(P)-binding domain Nitrite and sulphite reductase 4Fe-4S domain-like 11
PUA domain-like S-adenosyl-L-methionine-dependent methyltransferases 11
MesJ substrate recognition domain-like PheT/TilS domain 11
Ribonuclease PH domain 2-like Nucleic acid-binding proteins 11
N-terminal domain of bifunctional PutA protein ALDH-like 11
Soluble quinoprotein glucose dehydrogenase EAL domain-like 11
Zn-dependent exopeptidases LysM domain 11
"Winged helix" DNA-binding domain SCP-like 11
Sensory domain-like PYP-like sensor domain (PAS domain) 11
YhbC-like, N-terminal domain YhbC-like, C-terminal domain 11
CheY-like Methylesterase CheB, C-terminal domain 11
Rad51 N-terminal domain-like Rad51 N-terminal domain-like 11
Periplasmic binding protein-like II Periplasmic binding protein-like II 11
UBA-like Elongation factor Ts (EF-Ts), dimerisation domain 11
MoeA N-terminal region -like Molybdenum cofactor biosynthesis proteins 11
Multiheme cytochromes TPR-like 11
Pheromone-binding domain of LuxR-like quorum-sensing transcription factors C-terminal effector domain of the bipartite response regulators 11
Nicotinate/Quinolinate PRTase N-terminal domain-like Nicotinate/Quinolinate PRTase C-terminal domain-like 11
FMN-binding split barrel 2Fe-2S ferredoxin-like 11
RNase III domain-like dsRNA-binding domain-like 11
Formyltransferase FMT C-terminal domain-like 11
PurS-like Class I glutamine amidotransferase-like 11
Tetrahydrobiopterin biosynthesis enzymes-like Tetrahydrobiopterin biosynthesis enzymes-like 11
PUA domain-like P-loop containing nucleoside triphosphate hydrolases 11
all-alpha NTP pyrophosphatases all-alpha NTP pyrophosphatases 11
PurS-like FGAM synthase PurL, linker domain 11
Starch-binding domain-like (Trans)glycosidases 11
MoeA N-terminal region -like MoeA C-terminal domain-like 11
Ada DNA repair protein, N-terminal domain (N-Ada 10) TATA-box binding protein-like 11
GAF domain-like Phosphohistidine domain 11
Barwin-like endoglucanases Sporulation related repeat 11
Ribosomal protein L7/12, oligomerisation (N-terminal) domain ClpS-like 11
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 11
Histidine-containing phosphotransfer domain, HPT domain CheW-like 11
NAD(P)-binding Rossmann-fold domains 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
PurM C-terminal domain-like Class I glutamine amidotransferase-like 11
S13-like H2TH domain Glucocorticoid receptor-like (DNA-binding domain) 11
5' to 3' exonuclease, C-terminal subdomain Ribonuclease H-like 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Nucleotidylyl transferase 11
Thioredoxin-like TPR-like 11
CBD9-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
"Winged helix" DNA-binding domain Class II aaRS and biotin synthetases 11
DNA repair protein MutS, domain II DNA repair protein MutS, domain III 11
Class II aaRS and biotin synthetases YbaK/ProRS associated domain 11
FAD-linked reductases, C-terminal domain 4Fe-4S ferredoxins 11
DNA ligase/mRNA capping enzyme, catalytic domain BRCT domain 11
lambda repressor-like DNA-binding domains Cyanase C-terminal domain 11
N-terminal domain of MutM-like DNA repair proteins Glucocorticoid receptor-like (DNA-binding domain) 11
Flavoproteins Riboflavin synthase domain-like 11
Adenine nucleotide alpha hydrolases-like GMP synthetase C-terminal dimerisation domain 11
RuvA domain 2-like DNA helicase RuvA subunit, C-terminal domain 11
Nucleotidyltransferase substrate binding subunit/domain ACT-like 11
Nucleotide-diphospho-sugar transferases RmlC-like cupins 11
N-terminal domain of MutM-like DNA repair proteins S13-like H2TH domain 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases Nucleic acid-binding proteins 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain III 11
CheC-like Surface presentation of antigens (SPOA) 11
Homodimeric domain of signal transducing histidine kinase CheW-like 11
Putative DNA-binding domain Initiation factor IF2/eIF5b, domain 3 11
TrmE connector domain P-loop containing nucleoside triphosphate hydrolases 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) SIS domain 11
"Winged helix" DNA-binding domain C-terminal domain of arginine repressor 11
CO dehydrogenase molybdoprotein N-domain-like Molybdenum cofactor-binding domain 11
FAD/NAD(P)-binding domain HI0933 insert domain-like 11
L9 N-domain-like Ribosomal protein L9 C-domain 11
S-adenosylmethionine synthetase S-adenosylmethionine synthetase 11
"Winged helix" DNA-binding domain NagB/RpiA/CoA transferase-like 11
NAD(P)-binding Rossmann-fold domains Glutamyl tRNA-reductase dimerization domain 11

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