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Domain combination pairs in Plasmodium vivax SaI-1 7.0

All pairs of domain combinations at the superfamily level are listed here.
The identification of domain pairs does not account for the possibility of non-contiguous domains. Inserted, or interlaced, domains are seen as having a simple pair ordering.

  • For a list of unique full length architectures for this genome click here (can be slow).
Adjacent domain pairs graph

Graph of adjacent domain pairs.


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Domain combination pairs

651 domain combination pairs.
Click on a column heading to sort that column, or the 'View' button to see domain architetures for that domain pair combination.

Superfamily (N) Superfamily (C) Number of occurrances Number unique
P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases 6431
Actin-like ATPase domain Actin-like ATPase domain 1910
P-loop containing nucleoside triphosphate hydrolases Translation proteins 1915
RNA-binding domain, RBD RNA-binding domain, RBD 1710
ARM repeat ARM repeat 1310
WD40 repeat-like WD40 repeat-like 1310
Calcium ATPase, transduction domain A HAD-like 117
Nucleic acid-binding proteins P-loop containing nucleoside triphosphate hydrolases 114
Calcium ATPase, transduction domain A Calcium ATPase, transmembrane domain M 117
Ypt/Rab-GAP domain of gyp1p Ypt/Rab-GAP domain of gyp1p 105
GroEL equatorial domain-like GroEL-intermediate domain like 102
HAD-like Calcium ATPase, transmembrane domain M 106
GroEL-intermediate domain like GroEL apical domain-like 102
GroEL equatorial domain-like GroEL apical domain-like 102
ABC transporter transmembrane region P-loop containing nucleoside triphosphate hydrolases 97
Nucleotidylyl transferase Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 97
Nucleic acid-binding proteins Nucleic acid-binding proteins 99
P-loop containing nucleoside triphosphate hydrolases EF-G C-terminal domain-like 87
Translation proteins EF-G C-terminal domain-like 87
EF-G C-terminal domain-like EF-G C-terminal domain-like 87
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Ribosomal protein S5 domain 2-like 86
TPR-like TPR-like 87
Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 75
Metal cation-transporting ATPase, ATP-binding domain N Calcium ATPase, transmembrane domain M 74
FAD/NAD(P)-binding domain FAD/NAD(P)-binding domain 65
HSP40/DnaJ peptide-binding domain HSP40/DnaJ peptide-binding domain 65
EF-hand Protein kinase-like (PK-like) 63
LuxS/MPP-like metallohydrolase LuxS/MPP-like metallohydrolase 66
P-loop containing nucleoside triphosphate hydrolases Ribosomal protein S5 domain 2-like 65
Nucleic acid-binding proteins Class II aaRS and biotin synthetases 64
Metal cation-transporting ATPase, ATP-binding domain N HAD-like 63
Tubulin nucleotide-binding domain-like Tubulin C-terminal domain-like 63
Calcium ATPase, transduction domain A Metal cation-transporting ATPase, ATP-binding domain N 63
Chaperone J-domain HSP40/DnaJ peptide-binding domain 65
Thioredoxin-like Thioredoxin-like 65
CCCH zinc finger CCCH zinc finger 52
P-loop containing nucleoside triphosphate hydrolases post-AAA+ oligomerization domain-like 53
Class II aaRS and biotin synthetases Class II aaRS ABD-related 54
Actin-like ATPase domain Heat shock protein 70kD (HSP70), C-terminal subdomain 54
Nucleotidyltransferase PAP/OAS1 substrate-binding domain 54
EF-G C-terminal domain-like Ribosomal protein S5 domain 2-like 54
PIN domain-like 5' to 3' exonuclease, C-terminal subdomain 53
P-loop containing nucleoside triphosphate hydrolases TGS-like 52
SNARE-like Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor 53
Translation proteins EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 52
Translation proteins Ribosomal protein S5 domain 2-like 54
P-loop containing nucleoside triphosphate hydrolases EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 52
Ribonuclease H-like DNA/RNA polymerases 55
FAD/NAD(P)-binding domain FAD/NAD-linked reductases, dimerisation (C-terminal) domain 54
Riboflavin synthase domain-like Ferredoxin reductase-like, C-terminal NADP-linked domain 43
Growth factor receptor domain Growth factor receptor domain 43
Translation proteins Initiation factor IF2/eIF5b, domain 3 44
RNA-binding domain, RBD WW domain 43
NAD(P)-binding Rossmann-fold domains 6-phosphogluconate dehydrogenase C-terminal domain-like 42
ValRS/IleRS/LeuRS editing domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 42
S-adenosyl-L-methionine-dependent methyltransferases S-adenosyl-L-methionine-dependent methyltransferases 44
ARM repeat Protein kinase-like (PK-like) 43
Aminoacid dehydrogenase-like, N-terminal domain NAD(P)-binding Rossmann-fold domains 44
Nucleic acid-binding proteins Translation proteins SH3-like domain 42
Galactose-binding domain-like Galactose-binding domain-like 43
Insert subdomain of RNA polymerase alpha subunit RBP11-like subunits of RNA polymerase 42
SNARE-like SNARE fusion complex 41
Ribosomal protein S5 domain 2-like HSP90 C-terminal domain 42
ValRS/IleRS/LeuRS editing domain Nucleotidylyl transferase 42
EGF/Laminin EGF/Laminin 42
Thiamin diphosphate-binding fold (THDP-binding) TK C-terminal domain-like 43
EF-hand EF-hand 43
SAM/Pointed domain Protein kinase-like (PK-like) 44
ARM repeat Clathrin adaptor appendage domain 44
P-loop containing nucleoside triphosphate hydrolases Smc hinge domain 43
P-loop containing nucleoside triphosphate hydrolases Initiation factor IF2/eIF5b, domain 3 44
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase HSP90 C-terminal domain 42
Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) 44
Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain SAM/Pointed domain 33
ADC-like Cdc48 domain 2-like 32
Cyclin-like Cyclin-like 33
vWA-like C-terminal, gelsolin-like domain of Sec23/24 33
beta-sandwich domain of Sec23/24 C-terminal, gelsolin-like domain of Sec23/24 33
Ricin B-like lectins LCCL domain 32
Galactose-binding domain-like LCCL domain 32
Double Clp-N motif P-loop containing nucleoside triphosphate hydrolases 33
Quinoprotein alcohol dehydrogenase-like WD40 repeat-like 32
Actin-like ATPase domain Heat shock protein 70kD (HSP70), peptide-binding domain 32
Obg GTP-binding protein N-terminal domain P-loop containing nucleoside triphosphate hydrolases 33
RING/U-box SMAD/FHA domain 32
vWA-like Helical domain of Sec23/24 33
RCC1/BLIP-II RCC1/BLIP-II 33
Helical domain of Sec23/24 C-terminal, gelsolin-like domain of Sec23/24 33
Nucleotide cyclase Nucleotide cyclase 33
Ribosomal protein S5 domain 2-like Ribonuclease PH domain 2-like 32
Homeodomain-like Homeodomain-like 33
NAD(P)-binding Rossmann-fold domains LDH C-terminal domain-like 31
Sec63 N-terminal domain-like E set domains 33
vWA-like TSP-1 type 1 repeat 33
Protein kinase-like (PK-like) Protein kinase-like (PK-like) 33
beta-sandwich domain of Sec23/24 Helical domain of Sec23/24 33
HCP-like HCP-like 33
DNA repair protein MutS, domain III P-loop containing nucleoside triphosphate hydrolases 32
DNA clamp DNA clamp 32
Ribonuclease H-like Ribonuclease H-like 33
Cdc48 domain 2-like P-loop containing nucleoside triphosphate hydrolases 32
NAD(P)-binding Rossmann-fold domains Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 33
N-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase 32
Eukaryotic type KH-domain (KH-domain type I) Eukaryotic type KH-domain (KH-domain type I) 33
P-loop containing nucleoside triphosphate hydrolases C-terminal domain of alpha and beta subunits of F1 ATP synthase 32
P-loop containing nucleoside triphosphate hydrolases FtsH protease domain-like 32
FYVE/PHD zinc finger FYVE/PHD zinc finger 33
Thiolase-like Thiolase-like 32
Single hybrid motif CoA-dependent acyltransferases 33
E set domains E set domains 33
Alpha-L RNA-binding motif Pseudouridine synthase 32
Kelch motif Kelch motif 33
Ubiquitin-like UBA-like 33
PreATP-grasp domain Glutathione synthetase ATP-binding domain-like 33
cAMP-binding domain-like cAMP-binding domain-like 33
Heat shock protein 70kD (HSP70), peptide-binding domain Heat shock protein 70kD (HSP70), C-terminal subdomain 32
E set domains P-loop containing nucleoside triphosphate hydrolases 33
Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain Protein kinase-like (PK-like) 33
FAD/NAD(P)-binding domain FAD-linked reductases, C-terminal domain 33
N-terminal domain of alpha and beta subunits of F1 ATP synthase P-loop containing nucleoside triphosphate hydrolases 32
ADC-like P-loop containing nucleoside triphosphate hydrolases 32
vWA-like beta-sandwich domain of Sec23/24 33
Phosphoglucomutase, first 3 domains Phosphoglucomutase, C-terminal domain 22
Cysteine proteinases Cysteine proteinases 22
HAD-like Nucleotide cyclase 22
Zn-finger domain of Sec23/24 beta-sandwich domain of Sec23/24 22
F1F0 ATP synthase subunit C F1F0 ATP synthase subunit C 21
C2 domain (Calcium/lipid-binding domain, CaLB) C2 domain (Calcium/lipid-binding domain, CaLB) 22
WW domain FF domain 22
Galactose-binding domain-like Ricin B-like lectins 21
Zinc beta-ribbon Cyclin-like 22
DNase I-like DNase I-like 22
Ricin B-like lectins Fibrinogen C-terminal domain-like 21
PK beta-barrel domain-like PK C-terminal domain-like 21
ThrRS/AlaRS common domain Class II aaRS and biotin synthetases 22
beta and beta-prime subunits of DNA dependent RNA-polymerase beta and beta-prime subunits of DNA dependent RNA-polymerase 22
Nucleotide-diphospho-sugar transferases Trimeric LpxA-like enzymes 22
Galactose-binding domain-like Fibrinogen C-terminal domain-like 21
Pseudouridine synthase Pseudouridine synthase 22
Mitochondrial carrier Mitochondrial carrier 22
Tricorn protease domain 2 WD40 repeat-like 22
NAD(P)-binding Rossmann-fold domains Succinyl-CoA synthetase domains 22
Phosphoglucomutase, first 3 domains Phosphoglucomutase, first 3 domains 22
Kelch motif POZ domain 22
Calcium ATPase, transduction domain A Nucleotide cyclase 22
P-loop containing nucleoside triphosphate hydrolases Sec63 N-terminal domain-like 22
Hect, E3 ligase catalytic domain Hect, E3 ligase catalytic domain 22
Acyl-CoA N-acyltransferases (Nat) Acyl-CoA N-acyltransferases (Nat) 22
Anthrax protective antigen LCCL domain 22
Zn-finger domain of Sec23/24 C-terminal, gelsolin-like domain of Sec23/24 22
Cullin homology domain "Winged helix" DNA-binding domain 22
Creatinase/aminopeptidase "Winged helix" DNA-binding domain 22
RNI-like RNI-like 22
Ankyrin repeat Ankyrin repeat 22
ARM repeat Subdomain of clathrin and coatomer appendage domain 22
ABC transporter transmembrane region ABC transporter transmembrane region 22
Nucleotidylyl transferase Ribosomal protein L25-like 22
DNA ligase/mRNA capping enzyme, catalytic domain Nucleic acid-binding proteins 22
Fe,Mn superoxide dismutase (SOD), N-terminal domain Fe,Mn superoxide dismutase (SOD), C-terminal domain 22
P-loop containing nucleoside triphosphate hydrolases "Winged helix" DNA-binding domain 22
HAD-like P-loop containing nucleoside triphosphate hydrolases 22
Activating enzymes of the ubiquitin-like proteins Activating enzymes of the ubiquitin-like proteins 22
Fibrinogen C-terminal domain-like LCCL domain 21
Multidrug resistance efflux transporter EmrE Multidrug resistance efflux transporter EmrE 21
Nucleic acid-binding proteins Eukaryotic type KH-domain (KH-domain type I) 22
Zn-finger domain of Sec23/24 vWA-like 22
PK beta-barrel domain-like Phosphoenolpyruvate/pyruvate domain 21
Chaperone J-domain Thioredoxin-like 22
Nucleotidylyl transferase Nucleotidylyl transferase 22
Cullin repeat-like "Winged helix" DNA-binding domain 22
P-loop containing nucleoside triphosphate hydrolases WD40 repeat-like 22
Phosphoglycerate mutase-like Phosphoglycerate mutase-like 22
Chaperone J-domain DnaJ/Hsp40 cysteine-rich domain 22
N-terminal, heterodimerisation domain of RBP7 (RpoE) Nucleic acid-binding proteins 21
P-loop containing nucleoside triphosphate hydrolases RING/U-box 22
dsRNA-binding domain-like Ribosomal protein S5 domain 2-like 22
Ribosomal L11/L12e N-terminal domain Ribosomal protein L11, C-terminal domain 22
DNA repair protein MutS, domain I P-loop containing nucleoside triphosphate hydrolases 22
HAD-like BRCT domain 22
Folate-binding domain Aminomethyltransferase beta-barrel domain 22
DnaJ/Hsp40 cysteine-rich domain HSP40/DnaJ peptide-binding domain 22
Clathrin adaptor appendage domain Subdomain of clathrin and coatomer appendage domain 22
Restriction endonuclease-like RuvA domain 2-like 22
Thioredoxin-like GST C-terminal domain-like 22
Translation initiation factor 2 beta, aIF2beta, N-terminal domain Zinc-binding domain of translation initiation factor 2 beta 22
Flavoproteins Riboflavin synthase domain-like 22
LCCL domain Concanavalin A-like lectins/glucanases 22
Formate/glycerate dehydrogenase catalytic domain-like NAD(P)-binding Rossmann-fold domains 22
Flavoproteins Ferredoxin reductase-like, C-terminal NADP-linked domain 22
Zn-finger domain of Sec23/24 Helical domain of Sec23/24 22
Dipeptidyl peptidase I (cathepsin C), exclusion domain Cysteine proteinases 22
Glutathione synthetase ATP-binding domain-like Succinyl-CoA synthetase domains 22
GST C-terminal domain-like Nucleotidylyl transferase 22
Calcium ATPase, transmembrane domain M Nucleotide cyclase 22
ARM repeat Pentapeptide repeat-like 22
PH domain-like EF-hand 22
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Type II DNA topoisomerase 22
Sec63 N-terminal domain-like Sec63 N-terminal domain-like 22
FYVE/PHD zinc finger SET domain 22
RING/U-box Cysteine proteinases 22
TATA-box binding protein-like TATA-box binding protein-like 22
PP2C-like PP2C-like 22
Phosphoenolpyruvate/pyruvate domain PK C-terminal domain-like 21
vWA-like vWA-like 22
Chaperone J-domain Chaperone J-domain 22
Phosphofructokinase Phosphofructokinase 21
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 22
Domain of the SRP/SRP receptor G-proteins P-loop containing nucleoside triphosphate hydrolases 22
Class II aaRS and biotin synthetases Anticodon-binding domain of PheRS 22
Ribosomal L27 protein-like Nucleic acid-binding proteins 22
Ribosomal protein S5 domain 2-like Type II DNA topoisomerase 22
Cullin repeat-like Cullin homology domain 22
Rad51 N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 21
EF-hand Metallo-dependent phosphatases 22
t-snare proteins SNARE fusion complex 22
Galactose oxidase, central domain Galactose oxidase, central domain 11
PurM N-terminal domain-like PurM C-terminal domain-like 11
ATP-dependent DNA ligase DNA-binding domain DNA ligase/mRNA capping enzyme, catalytic domain 11
Zinc beta-ribbon Zinc beta-ribbon 11
Prokaryotic type KH domain (KH-domain type II) Ribosomal protein S3 C-terminal domain 11
RING/U-box WD40 repeat-like 11
WD40 repeat-like DPP6 N-terminal domain-like 11
Anthrax protective antigen Concanavalin A-like lectins/glucanases 11
PLC-like phosphodiesterases C2 domain (Calcium/lipid-binding domain, CaLB) 11
L domain-like Ubiquitin-like 11
alpha/beta knot Nucleic acid-binding proteins 11
DNA/RNA polymerases DNA/RNA polymerases 11
Ankyrin repeat Arginase/deacetylase 11
Kelch motif ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
2Fe-2S ferredoxin-like alpha-helical ferredoxin 11
P-loop containing nucleoside triphosphate hydrolases Pentapeptide repeat-like 11
Ribosomal protein L6 Ribosomal protein L6 11
GST C-terminal domain-like Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
Creatinase/prolidase N-terminal domain Creatinase/aminopeptidase 11
Trimeric LpxA-like enzymes ARM repeat 11
Folate-binding domain Folate-binding domain 11
Cysteine proteinases Calpain large subunit, middle domain (domain III) 11
L domain-like L domain-like 11
Macro domain-like CRAL/TRIO domain 11
FMN-linked oxidoreductases alpha-helical ferredoxin 11
TRAF domain-like Cysteine proteinases 11
ARM repeat beta-sandwich domain of Sec23/24 11
CBS-domain pair Inosine monophosphate dehydrogenase (IMPDH) 11
BRCT domain post-AAA+ oligomerization domain-like 11
Ribosomal L27 protein-like Eukaryotic type KH-domain (KH-domain type I) 11
Clathrin heavy-chain terminal domain ARM repeat 11
Nucleic acid-binding proteins WWE domain 11
beta-sandwich domain of Sec23/24 Homeodomain-like 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
TPR-like "Winged helix" DNA-binding domain 11
FMN-linked oxidoreductases FAD/NAD(P)-binding domain 11
Metallo-hydrolase/oxidoreductase Metallo-hydrolase/oxidoreductase 11
alpha-helical ferredoxin Nucleotide-binding domain 11
Chromo domain-like P-loop containing nucleoside triphosphate hydrolases 11
Class II aaRS and biotin synthetases C-terminal domain of ProRS 11
P-loop containing nucleoside triphosphate hydrolases Signal peptide-binding domain 11
Class II aaRS and biotin synthetases SufE/NifU 11
Smc hinge domain Tropomyosin 11
Anthrax protective antigen Galactose-binding domain-like 11
DNA polymerase beta, N-terminal domain-like Restriction endonuclease-like 11
Rudiment single hybrid motif Single hybrid motif 11
P-loop containing nucleoside triphosphate hydrolases DNA/RNA polymerases 11
CCCH zinc finger RNA-binding domain, RBD 11
GST C-terminal domain-like eEF-1beta-like 11
Adhesin YadA, collagen-binding domain SET domain 11
Class I glutamine amidotransferase-like ADC synthase 11
beta-lactamase/transpeptidase-like beta-lactamase/transpeptidase-like 11
FYVE/PHD zinc finger Bromodomain 11
Glutathione synthetase ATP-binding domain-like Rudiment single hybrid motif 11
Putative DNA-binding domain Putative DNA-binding domain 11
PheT/TilS domain Class II aaRS and biotin synthetases 11
Translational machinery components L30e-like 11
UBA-like Elongation factor Ts (EF-Ts), dimerisation domain 11
Lipase/lipooxygenase domain (PLAT/LH2 domain) SRCR-like 11
Ankyrin repeat Hect, E3 ligase catalytic domain 11
Kelch motif E set domains 11
Trypsin-like serine proteases PDZ domain-like 11
PreATP-grasp domain Methylglyoxal synthase-like 11
EF-hand SAICAR synthase-like 11
Methyl-accepting chemotaxis protein (MCP) signaling domain GYF domain 11
NAD(P)-binding Rossmann-fold domains Glutathione synthetase ATP-binding domain-like 11
alpha/beta-Hydrolases alpha/beta-Hydrolases 11
Nucleotide-binding domain FAD/NAD(P)-binding domain 11
TPR-like ARM repeat 11
PH domain-like WD40 repeat-like 11
Putative DNA-binding domain Class II aaRS and biotin synthetases 11
Kelch motif P-loop containing nucleoside triphosphate hydrolases 11
Elongation factor TFIIS domain 2 Zinc beta-ribbon 11
NAD(P)-binding Rossmann-fold domains 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 11
FYSH domain Hypothetical protein AF0491, middle domain 11
PH domain-like BEACH domain 11
POZ domain Skp1 dimerisation domain-like 11
BRCT domain P-loop containing nucleoside triphosphate hydrolases 11
Sialidases Oligoxyloglucan reducing end-specific cellobiohydrolase 11
Taf5 N-terminal domain-like WD40 repeat-like 11
BEACH domain WD40 repeat-like 11
CRAL/TRIO N-terminal domain CRAL/TRIO domain 11
Obg GTP-binding protein N-terminal domain Obg GTP-binding protein C-terminal domain 11
Carbamoyl phosphate synthetase, large subunit connection domain Methylglyoxal synthase-like 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Alpha subunit of glutamate synthase, C-terminal domain 11
Macro domain-like Zn-dependent exopeptidases 11
Trypsin-like serine proteases P-loop containing nucleoside triphosphate hydrolases 11
Pentapeptide repeat-like Ribosomal protein S5 domain 2-like 11
Periplasmic binding protein-like II Periplasmic binding protein-like II 11
YWTD domain Growth factor receptor domain 11
Class I glutamine amidotransferase-like PreATP-grasp domain 11
C2 domain (Calcium/lipid-binding domain, CaLB) Cysteine proteinases 11
NSFL1 (p97 ATPase) cofactor p47, SEP domain Ubiquitin-like 11
Carbamoyl phosphate synthetase, small subunit N-terminal domain PreATP-grasp domain 11
Translation initiation factor 2 beta, aIF2beta, N-terminal domain ARM repeat 11
Nucleoside diphosphate kinase, NDK Nucleoside diphosphate kinase, NDK 11
YbiA-like SMAD/FHA domain 11
NAD(P)-binding Rossmann-fold domains P-loop containing nucleoside triphosphate hydrolases 11
DHS-like NAD/FAD-binding domain NAD(P)-binding Rossmann-fold domains 11
EF-hand C2 domain (Calcium/lipid-binding domain, CaLB) 11
BB1717-like BB1717-like 11
DNA mismatch repair protein MutL DNA mismatch repair protein MutL 11
PRTase-like PRTase-like 11
Cap-Gly domain L domain-like 11
DNA repair protein MutS, domain II P-loop containing nucleoside triphosphate hydrolases 11
Periplasmic binding protein-like II Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain 11
Double Clp-N motif Double Clp-N motif 11
TPR-like PDZ domain-like 11
RNA-binding domain, RBD Surp module (SWAP domain) 11
NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains 11
PRP4-like WD40 repeat-like 11
Thioesterase/thiol ester dehydrase-isomerase Thioesterase/thiol ester dehydrase-isomerase 11
Creatinase/aminopeptidase Creatinase/aminopeptidase 11
Folate-binding domain TrmE connector domain 11
FMN-linked oxidoreductases Nucleotide-binding domain 11
Class I glutamine amidotransferase-like GMP synthetase C-terminal dimerisation domain 11
Adenine nucleotide alpha hydrolases-like GMP synthetase C-terminal dimerisation domain 11
Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 Zinc beta-ribbon 11
VC0467-like VC0467-like 11
Glutamine synthetase/guanido kinase Glutamine synthetase/guanido kinase 11
EF-hand PLC-like phosphodiesterases 11
Glucocorticoid receptor-like (DNA-binding domain) AN1-like Zinc finger 11
SSo0622-like Galactose oxidase, central domain 11
Activator of Hsp90 ATPase, Aha1 Activator of Hsp90 ATPase, Aha1 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) FMN-linked oxidoreductases 11
Acid proteases Acid proteases 11
Ubiquitin-like Ubiquitin-like 11
Acetyl-CoA synthetase-like DHS-like NAD/FAD-binding domain 11
Putative DNA-binding domain PheT/TilS domain 11
Formate/glycerate dehydrogenase catalytic domain-like Formate/glycerate dehydrogenase catalytic domain-like 11
Metalloproteases ("zincins"), catalytic domain 4'-phosphopantetheinyl transferase 11
Glutathione synthetase ATP-binding domain-like Glutathione synthetase ATP-binding domain-like 11
Single hybrid motif ClpP/crotonase 11
P-loop containing nucleoside triphosphate hydrolases RCC1/BLIP-II 11
Class I glutamine amidotransferase-like Adenine nucleotide alpha hydrolases-like 11
Folate-binding domain P-loop containing nucleoside triphosphate hydrolases 11
SAICAR synthase-like SAICAR synthase-like 11
YbiA-like RNA-binding domain, RBD 11
FabD/lysophospholipase-like FabD/lysophospholipase-like 11
GST C-terminal domain-like eEF1-gamma domain 11
Arginase/deacetylase SAICAR synthase-like 11
PH domain-like C2 domain (Calcium/lipid-binding domain, CaLB) 11
Quinoprotein alcohol dehydrogenase-like EF-hand 11
FF domain FF domain 11
Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 Elongation factor TFIIS domain 2 11
RING/U-box Homeodomain-like 11
S-adenosyl-L-methionine-dependent methyltransferases Putative methyltransferase TM0872, insert domain 11
Aminopeptidase/glucanase lid domain Zn-dependent exopeptidases 11
WD40 repeat-like Cyclophilin-like 11
PUA domain-like SET domain 11
Galactose-binding domain-like ARM repeat 11
DNA primase core DNA/RNA polymerases 11
TATA-box binding protein-like DNA-glycosylase 11
DNA primase core P-loop containing nucleoside triphosphate hydrolases 11
SET domain SET domain 11
RING/U-box RNA-binding domain, RBD 11
Radical SAM enzymes Acyl-CoA N-acyltransferases (Nat) 11
Ankyrin repeat Bromodomain 11
S-adenosylmethionine synthetase S-adenosylmethionine synthetase 11
Carbamoyl phosphate synthetase, small subunit N-terminal domain Methylglyoxal synthase-like 11
Calpain large subunit, middle domain (domain III) Calpain large subunit, middle domain (domain III) 11
Bromodomain SET domain 11
EPT/RTPC-like EPT/RTPC-like 11
C2 domain (Calcium/lipid-binding domain, CaLB) Caspase-like 11
P-loop containing nucleoside triphosphate hydrolases Prokaryotic type KH domain (KH-domain type II) 11
ARM repeat RING/U-box 11
Nucleic acid-binding proteins eIF2alpha middle domain-like 11
Glutathione synthetase ATP-binding domain-like Single hybrid motif 11
Glutathione synthetase ATP-binding domain-like Carbamoyl phosphate synthetase, large subunit connection domain 11
Ribosomal protein S5 domain 2-like DNA mismatch repair protein MutL 11
Ankyrin repeat S-adenosyl-L-methionine-dependent methyltransferases 11
"Winged helix" DNA-binding domain "Winged helix" DNA-binding domain 11
Ran binding protein zinc finger-like RNA-binding domain, RBD 11
Carbamoyl phosphate synthetase, small subunit N-terminal domain Glutathione synthetase ATP-binding domain-like 11
P-loop containing nucleoside triphosphate hydrolases Obg GTP-binding protein C-terminal domain 11
Protein kinase-like (PK-like) Ypt/Rab-GAP domain of gyp1p 11
beta-sandwich domain of Sec23/24 Cysteine proteinases 11
ISP domain FAD/NAD-linked reductases, dimerisation (C-terminal) domain 11
NagB/RpiA/CoA transferase-like NAD(P)-binding Rossmann-fold domains 11
Galactose oxidase, central domain S-adenosyl-L-methionine-dependent methyltransferases 11
Chaperone J-domain Homeodomain-like 11
HMG-box HMG-box 11
Glucocorticoid receptor-like (DNA-binding domain) RING/U-box 11
Eukaryotic type KH-domain (KH-domain type I) Retrovirus zinc finger-like domains 11
PH domain-like PLC-like phosphodiesterases 11
Cdc48 domain 2-like RING/U-box 11
Acyl-CoA N-acyltransferases (Nat) Bromodomain 11
Ubiquitin-like Acid proteases 11
P-loop containing nucleoside triphosphate hydrolases Homeodomain-like 11
Succinyl-CoA synthetase domains Succinyl-CoA synthetase domains 11
CRAL/TRIO domain GTPase activation domain, GAP 11
Cysteine-rich domain NAD kinase/diacylglycerol kinase-like 11
Alpha subunit of glutamate synthase, C-terminal domain Nucleotide-binding domain 11
Carbamoyl phosphate synthetase, small subunit N-terminal domain Class I glutamine amidotransferase-like 11
ClpP/crotonase ClpP/crotonase 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) FAD/NAD(P)-binding domain 11
Chaperone J-domain E set domains 11
Class I glutamine amidotransferase-like Class I glutamine amidotransferase-like 11
HMG-box Histone-fold 11
Chaperone J-domain beta-beta-alpha zinc fingers 11
Chaperone J-domain HSC20 (HSCB), C-terminal oligomerisation domain 11
HMG-box Homeodomain-like 11
Ricin B-like lectins Anthrax protective antigen 11
TrmE connector domain P-loop containing nucleoside triphosphate hydrolases 11
Cryptochrome/photolyase, N-terminal domain Cryptochrome/photolyase FAD-binding domain 11
Protein kinase-like (PK-like) Rhodanese/Cell cycle control phosphatase 11
DHS-like NAD/FAD-binding domain Formate/glycerate dehydrogenase catalytic domain-like 11
TSP-1 type 1 repeat TSP-1 type 1 repeat 11
FMN-linked oxidoreductases Alpha subunit of glutamate synthase, C-terminal domain 11
Ypt/Rab-GAP domain of gyp1p Rhodanese/Cell cycle control phosphatase 11
P-loop containing nucleoside triphosphate hydrolases Tropomyosin 11
ARM repeat Hect, E3 ligase catalytic domain 11
Growth factor receptor domain Calcium ATPase, transmembrane domain M 11
SET domain Ankyrin repeat 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) SIS domain 11
DUSP-like Cysteine proteinases 11
Nucleic acid-binding proteins Translation proteins 11
P-loop containing nucleoside triphosphate hydrolases Ribonuclease H-like 11
SNARE-like Domain of the SRP/SRP receptor G-proteins 11
Glutathione synthetase ATP-binding domain-like Methylglyoxal synthase-like 11
Carbon-nitrogen hydrolase Adenine nucleotide alpha hydrolases-like 11
P-loop containing nucleoside triphosphate hydrolases Class I glutamine amidotransferase-like 11
Nucleic acid-binding proteins eIF-2-alpha, C-terminal domain 11
Chaperone J-domain Sec63 N-terminal domain-like 11
TPR-like Formin homology 2 domain (FH2 domain) 11
Translation proteins ThrRS/AlaRS common domain 11
YbaK/ProRS associated domain Class II aaRS ABD-related 11
ARM repeat "Winged helix" DNA-binding domain 11
Fe-only hydrogenase E set domains 11
P-loop containing nucleoside triphosphate hydrolases HRDC-like 11
Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain 11
ATP-dependent DNA ligase DNA-binding domain Nucleic acid-binding proteins 11
Ribosomal protein L7/12, oligomerisation (N-terminal) domain ClpS-like 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) Translation proteins 11
Rhodanese/Cell cycle control phosphatase Rhodanese/Cell cycle control phosphatase 11
Translation proteins Translation proteins 11
DNA ligase/mRNA capping enzyme, catalytic domain DNA ligase/mRNA capping enzyme, catalytic domain 11
L30e-like alpha/beta knot 11
DNA-glycosylase Nudix 11
UBA-like UBA-like 11
P-loop containing nucleoside triphosphate hydrolases vWA-like 11
cAMP-binding domain-like Protein kinase-like (PK-like) 11
GST C-terminal domain-like Nucleic acid-binding proteins 11
N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 L30e-like 11
Aconitase iron-sulfur domain LeuD/IlvD-like 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) alpha-helical ferredoxin 11
Leukotriene A4 hydrolase N-terminal domain Metalloproteases ("zincins"), catalytic domain 11
P-loop containing nucleoside triphosphate hydrolases Microbial and mitochondrial ADK, insert "zinc finger" domain 11
YbaK/ProRS associated domain C-terminal domain of ProRS 11
PLC-like phosphodiesterases PLC-like phosphodiesterases 11
"Winged helix" DNA-binding domain Protein kinase-like (PK-like) 11
UBC-like Protein kinase-like (PK-like) 11
Glycerol-3-phosphate (1)-acyltransferase Glycerol-3-phosphate (1)-acyltransferase 11
Nicotinate/Quinolinate PRTase N-terminal domain-like Nicotinate/Quinolinate PRTase C-terminal domain-like 11
Phospholipase D/nuclease Phospholipase D/nuclease 11
Class I glutamine amidotransferase-like Glutathione synthetase ATP-binding domain-like 11
CBS-domain pair cAMP-binding domain-like 11
CCCH zinc finger RING/U-box 11
Pentapeptide repeat-like Putative DNA-binding domain 11
PEP carboxykinase N-terminal domain PEP carboxykinase-like 11
NagB/RpiA/CoA transferase-like D-ribose-5-phosphate isomerase (RpiA), lid domain 11
Eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment DNA breaking-rejoining enzymes 11
Thioredoxin-like Ubiquitin-like 11
Alpha subunit of glutamate synthase, C-terminal domain alpha-helical ferredoxin 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) N-terminal nucleophile aminohydrolases (Ntn hydrolases) 11
6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK Dihydropteroate synthetase-like 11
PUA domain-like S-adenosyl-L-methionine-dependent methyltransferases 11
TPR-like Metallo-dependent phosphatases 11
beta-sandwich domain of Sec23/24 GYF domain 11
PAP/OAS1 substrate-binding domain PAP/Archaeal CCA-adding enzyme, C-terminal domain 11
Domain of the SRP/SRP receptor G-proteins Signal peptide-binding domain 11
LCCL domain SRCR-like 11
DPP6 N-terminal domain-like GYF domain 11
ThrRS/AlaRS common domain Nucleotidylyl transferase 11
Nucleic acid-binding proteins Initiation factor IF2/eIF5b, domain 3 11
SRCR-like SRCR-like 11
Class I glutamine amidotransferase-like Methylglyoxal synthase-like 11
Thiamin diphosphate-binding fold (THDP-binding) DHS-like NAD/FAD-binding domain 11
UBC-like UBA-like 11
Kelch motif Metallo-dependent phosphatases 11
YbaK/ProRS associated domain Class II aaRS and biotin synthetases 11
Enolase N-terminal domain-like Enolase C-terminal domain-like 11
Staphylococcal nuclease Tudor/PWWP/MBT 11
P-loop containing nucleoside triphosphate hydrolases Probable GTPase Der, C-terminal domain 11
Ubiquitin-like XPC-binding domain 11
Class II aaRS and biotin synthetases Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) 11
TPR-like Activator of Hsp90 ATPase, Aha1 11
Ran binding protein zinc finger-like Ran binding protein zinc finger-like 11
FYVE/PHD zinc finger P-loop containing nucleoside triphosphate hydrolases 11
TPR-like Chaperone J-domain 11
SRCR-like Concanavalin A-like lectins/glucanases 11
ARM repeat Multidrug efflux transporter AcrB transmembrane domain 11
beta-beta-alpha zinc fingers beta-beta-alpha zinc fingers 11
RNA-binding domain, RBD PABC (PABP) domain 11
P-loop containing nucleoside triphosphate hydrolases Concanavalin A-like lectins/glucanases 11
PLP-binding barrel Alanine racemase C-terminal domain-like 11
Cysteine-rich domain Cysteine-rich domain 11
FAD/NAD(P)-binding domain FYVE/PHD zinc finger 11
Flavoproteins Radical SAM enzymes 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
4Fe-4S ferredoxins P-loop containing nucleoside triphosphate hydrolases 11
Outer arm dynein light chain 1 L domain-like 11
Carbamoyl phosphate synthetase, small subunit N-terminal domain Carbamoyl phosphate synthetase, large subunit connection domain 11
Ribonuclease H-like HRDC-like 11
PreATP-grasp domain Carbamoyl phosphate synthetase, large subunit connection domain 11
Cytochrome c Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor 11
NAD kinase/diacylglycerol kinase-like NAD kinase/diacylglycerol kinase-like 11
Pseudouridine synthase PUA domain-like 11
Nucleotidyltransferase PAP/Archaeal CCA-adding enzyme, C-terminal domain 11
Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases 11
RING/U-box RING/U-box 11
Single hybrid motif Single hybrid motif 11
DNA primase core Ribonuclease H-like 11
DNA breaking-rejoining enzymes DNA breaking-rejoining enzymes 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain III 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Adenine nucleotide alpha hydrolases-like 11
Acyl-CoA binding protein Ankyrin repeat 11
ISP domain FAD/NAD(P)-binding domain 11
Chaperone J-domain CSL zinc finger 11
GST C-terminal domain-like Ribosomal protein L25-like 11
N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 Translational machinery components 11
Pre-PUA domain PUA domain-like 11
BRCT domain DNA/RNA polymerases 11
Nucleotidylyl transferase Alpha-L RNA-binding motif 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase DNA mismatch repair protein MutL 11
Thiamin pyrophosphokinase, catalytic domain Thiamin pyrophosphokinase, substrate-binding domain 11
Glutathione synthetase ATP-binding domain-like ClpP/crotonase 11
Staphylococcal nuclease Staphylococcal nuclease 11
SMAD/FHA domain RNA-binding domain, RBD 11
Ricin B-like lectins Concanavalin A-like lectins/glucanases 11
Formyltransferase FMT C-terminal domain-like 11
Homeodomain-like CHY zinc finger-like 11
ITPase-like ITPase-like 11
RNA-binding domain, RBD Eukaryotic type KH-domain (KH-domain type I) 11
Glutamine synthetase, N-terminal domain Glutamine synthetase/guanido kinase 11
Alpha subunit of glutamate synthase, C-terminal domain FAD/NAD(P)-binding domain 11
PreATP-grasp domain ClpP/crotonase 11
PX domain WD40 repeat-like 11
ARM repeat Sec7 domain 11
LCCL domain LCCL domain 11
Arginase/deacetylase Arginase/deacetylase 11
Terpenoid cyclases/Protein prenyltransferases Cytochrome c oxidase subunit II-like, transmembrane region 11
SNARE-like P-loop containing nucleoside triphosphate hydrolases 11
Ribosomal protein S5 domain 2-like GHMP Kinase, C-terminal domain 11
"Winged helix" DNA-binding domain Sec63 N-terminal domain-like 11
Translation proteins Pentapeptide repeat-like 11
Calponin-homology domain, CH-domain EB1 dimerisation domain-like 11
PDZ domain-like P-loop containing nucleoside triphosphate hydrolases 11
SNARE fusion complex SNARE fusion complex 11
ThrRS/AlaRS common domain Class II aaRS ABD-related 11
tRNA-binding arm Class II aaRS and biotin synthetases 11
Thioredoxin-like eEF1-gamma domain 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) ThrRS/AlaRS common domain 11
Nucleotide-diphospho-sugar transferases ARM repeat 11
Acetyl-CoA synthetase-like Thiamin diphosphate-binding fold (THDP-binding) 11
Chromo domain-like Chromo domain-like 11
RNA-binding domain, RBD Tricorn protease domain 2 11
Dihydrofolate reductase-like Thymidylate synthase/dCMP hydroxymethylase 11
Fe-S cluster assembly (FSCA) domain-like P-loop containing nucleoside triphosphate hydrolases 11
Protein kinase-like (PK-like) beta-lactamase/transpeptidase-like 11
"Winged helix" DNA-binding domain HRDC-like 11
NagB/RpiA/CoA transferase-like NagB/RpiA/CoA transferase-like 11
Rudiment single hybrid motif ClpP/crotonase 11
PLP-dependent transferases Ornithine decarboxylase C-terminal domain 11
"Winged helix" DNA-binding domain E set domains 11
ISP transmembrane anchor ISP domain 11
GroEL apical domain-like SAICAR synthase-like 11
YWTD domain 3-carboxy-cis,cis-mucoante lactonizing enzyme 11
Clavaminate synthase-like Clavaminate synthase-like 11
PUA domain-like eIF1-like 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Nucleotidylyl transferase 11
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 11
PRP4-like Functional domain of the splicing factor Prp18 11
PreATP-grasp domain PreATP-grasp domain 11
R1 subunit of ribonucleotide reductase, N-terminal domain PFL-like glycyl radical enzymes 11
SSo0622-like S-adenosyl-L-methionine-dependent methyltransferases 11
Alanine racemase C-terminal domain-like Alanine racemase C-terminal domain-like 11
Pentapeptide repeat-like EF-G C-terminal domain-like 11
Chromo domain-like Acyl-CoA N-acyltransferases (Nat) 11
Thioredoxin-like FAD-dependent thiol oxidase 11
Kringle-like Calcium ATPase, transmembrane domain M 11
Cation efflux protein transmembrane domain-like Cation efflux protein cytoplasmic domain-like 11
UBA-like XPC-binding domain 11
S-adenosylmethionine decarboxylase PLP-binding barrel 11
FumA C-terminal domain-like FumA C-terminal domain-like 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Nucleotide-binding domain 11
Kringle-like Growth factor receptor domain 11
NagB/RpiA/CoA transferase-like Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 11
P-loop containing nucleoside triphosphate hydrolases EF-hand 11
Ribonuclease H-like Nucleic acid-binding proteins 11
Ubiquitin-like Zn-binding ribosomal proteins 11
vWA-like Cysteine-rich domain 11
Cap-Gly domain Ubiquitin-like 11
TPR-like RING/U-box 11
ADP-ribosylation B-box zinc-binding domain 11
Sec1/munc18-like (SM) proteins Sec1/munc18-like (SM) proteins 11
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 11
DNA repair protein MutS, domain II DNA repair protein MutS, domain III 11
WW domain WW domain 11
PH domain-like Oxysterol-binding protein-like 11
Lipase/lipooxygenase domain (PLAT/LH2 domain) Concanavalin A-like lectins/glucanases 11
eIF2alpha middle domain-like eIF-2-alpha, C-terminal domain 11
Zinc-binding domain of translation initiation factor 2 beta ARM repeat 11
Glutamine synthetase/guanido kinase GatB/YqeY motif 11
Dcp2 domain-like Nudix 11
Nucleotidylyl transferase An anticodon-binding domain of class I aminoacyl-tRNA synthetases 11
dUTPase-like dUTPase-like 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain II 11
Glucocorticoid receptor-like (DNA-binding domain) P-loop containing nucleoside triphosphate hydrolases 11
Class II aaRS ABD-related C-terminal domain of ProRS 11
FKBP-like TPR-like 11
Eukaryotic RPB5 N-terminal domain RPB5-like RNA polymerase subunit 11
SMAD/FHA domain SMAD/FHA domain 11
PreATP-grasp domain Single hybrid motif 11
PH domain-like Protein kinase-like (PK-like) 11
Nucleotidyltransferase Poly A polymerase C-terminal region-like 11
Class II aaRS ABD-related Class II aaRS ABD-related 11
PUA domain-like SWIB/MDM2 domain 11
alpha-helical ferredoxin FAD/NAD(P)-binding domain 11
S-adenosylmethionine decarboxylase Alanine racemase C-terminal domain-like 11
Class II aaRS and biotin synthetases Translation proteins 11
GroES-like GroES-like 11
Class I glutamine amidotransferase-like Carbamoyl phosphate synthetase, large subunit connection domain 11
MIT domain P-loop containing nucleoside triphosphate hydrolases 11
Surp module (SWAP domain) Surp module (SWAP domain) 11
Lipase/lipooxygenase domain (PLAT/LH2 domain) LCCL domain 11
Apolipoprotein A-I Apolipoprotein A-I 11
Type II DNA topoisomerase GyrA/ParC C-terminal domain-like 11
SWIB/MDM2 domain eIF1-like 11
PreATP-grasp domain Rudiment single hybrid motif 11
Coiled-coil domain of nucleotide exchange factor GrpE Head domain of nucleotide exchange factor GrpE 11
FAD-linked reductases, C-terminal domain FYVE/PHD zinc finger 11
TRAF domain-like Pseudouridine synthase 11
Transcription factor IIA (TFIIA), beta-barrel domain FAD/NAD(P)-binding domain 11
Ubiquitin-like Cysteine proteinases 11

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