SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.


Domain combination pairs in Xanthomonas campestris pv. campestris str. 8004

All pairs of domain combinations at the superfamily level are listed here.
The identification of domain pairs does not account for the possibility of non-contiguous domains. Inserted, or interlaced, domains are seen as having a simple pair ordering.

  • For a list of unique full length architectures for this genome click here (can be slow).
Adjacent domain pairs graph

Graph of adjacent domain pairs.


Add or remove domain pairs

The links below permit the addition or removal of specific sets of domain combination pairs.


Jump to [ Top of page · Add/remove domain pairs · Domain combination pairs ]

Add or remove genomes

Change the list of genome two-letter codes in the 'Include genomes' box to include domain-pairs from those genomes.
Change the list of genomes in the 'Exclude genomes' box to exclude domain-pairs from those genomes.
List of all two-letter genome codes.

Add or remove genomes:
Include genomes:
Exclude genomes:


Jump to [ Top of page · Add/remove domain pairs · Add/remove genomes ]

Domain combination pairs

751 domain combination pairs.
Click on a column heading to sort that column, or the 'View' button to see domain architetures for that domain pair combination.

Superfamily (N) Superfamily (C) Number of occurrances Number unique
Homodimeric domain of signal transducing histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 4528
"Winged helix" DNA-binding domain Periplasmic binding protein-like II 362
P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases 2517
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheY-like 2018
CheY-like Homodimeric domain of signal transducing histidine kinase 1917
PYP-like sensor domain (PAS domain) ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 1714
PYP-like sensor domain (PAS domain) Homodimeric domain of signal transducing histidine kinase 1512
CheY-like C-terminal effector domain of the bipartite response regulators 152
NAD(P)-binding Rossmann-fold domains 6-phosphogluconate dehydrogenase C-terminal domain-like 135
Sigma2 domain of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 134
Thioredoxin-like GST C-terminal domain-like 121
(Trans)glycosidases Glycosyl hydrolase domain 127
GroES-like NAD(P)-binding Rossmann-fold domains 123
PYP-like sensor domain (PAS domain) PYP-like sensor domain (PAS domain) 1211
NAD(P)-binding Rossmann-fold domains Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 124
Nucleotide cyclase EAL domain-like 118
Homeodomain-like Tetracyclin repressor-like, C-terminal domain 112
Actin-like ATPase domain Actin-like ATPase domain 114
HAMP domain-like Methyl-accepting chemotaxis protein (MCP) signaling domain 113
Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain 116
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB transmembrane domain 105
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB transmembrane domain 105
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 105
CheY-like PYP-like sensor domain (PAS domain) 109
lambda repressor-like DNA-binding domains Periplasmic binding protein-like I 101
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 105
ABC transporter transmembrane region P-loop containing nucleoside triphosphate hydrolases 102
Metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases 106
PreATP-grasp domain Glutathione synthetase ATP-binding domain-like 105
Multidrug resistance efflux transporter EmrE Multidrug resistance efflux transporter EmrE 92
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 94
DPP6 N-terminal domain-like alpha/beta-Hydrolases 92
PYP-like sensor domain (PAS domain) Nucleotide cyclase 87
FAD/NAD(P)-binding domain FAD-linked reductases, C-terminal domain 85
GAF domain-like Nucleotide cyclase 86
Riboflavin synthase domain-like Ferredoxin reductase-like, C-terminal NADP-linked domain 83
Homeodomain-like Homeodomain-like 86
P-loop containing nucleoside triphosphate hydrolases Homeodomain-like 73
Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) 75
Phospholipase D/nuclease Phospholipase D/nuclease 74
Histidine-containing phosphotransfer domain, HPT domain ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 75
P-loop containing nucleoside triphosphate hydrolases Translation proteins 76
Thiolase-like Thiolase-like 71
Calcium-dependent phosphotriesterase Calcium-dependent phosphotriesterase 65
Nucleotidylyl transferase Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 65
Alpha-L RNA-binding motif Pseudouridine synthase 62
CheY-like Homeodomain-like 62
Enolase N-terminal domain-like Enolase C-terminal domain-like 61
CheY-like P-loop containing nucleoside triphosphate hydrolases 62
MurD-like peptide ligases, catalytic domain MurD-like peptide ligases, peptide-binding domain 64
Starch-binding domain-like Porins 62
(Trans)glycosidases Beta-D-glucan exohydrolase, C-terminal domain 63
Histidine-containing phosphotransfer domain, HPT domain Homodimeric domain of signal transducing histidine kinase 64
CheY-like CheY-like 66
Galactose-binding domain-like (Trans)glycosidases 63
Acyl-CoA dehydrogenase NM domain-like Acyl-CoA dehydrogenase C-terminal domain-like 62
PYP-like sensor domain (PAS domain) GAF domain-like 66
Glutathione synthetase ATP-binding domain-like Rudiment single hybrid motif 52
GAF domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 54
Thiamin diphosphate-binding fold (THDP-binding) TK C-terminal domain-like 54
PreATP-grasp domain Rudiment single hybrid motif 52
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Ribosomal protein S5 domain 2-like 55
E set domains (Trans)glycosidases 53
Aminoacid dehydrogenase-like, N-terminal domain NAD(P)-binding Rossmann-fold domains 53
Histidine-containing phosphotransfer domain, HPT domain CheY-like 54
GAF domain-like Homodimeric domain of signal transducing histidine kinase 54
Formate/glycerate dehydrogenase catalytic domain-like NAD(P)-binding Rossmann-fold domains 42
PYP-like sensor domain (PAS domain) EAL domain-like 43
Nucleic acid-binding proteins Nucleic acid-binding proteins 43
Calcium-dependent phosphotriesterase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 44
Histidine-containing phosphotransfer domain, HPT domain CheW-like 43
Nucleic acid-binding proteins Class II aaRS and biotin synthetases 43
Arabinanase/levansucrase/invertase Concanavalin A-like lectins/glucanases 41
ACT-like ACT-like 44
Chemotaxis receptor methyltransferase CheR, N-terminal domain S-adenosyl-L-methionine-dependent methyltransferases 42
Leukotriene A4 hydrolase N-terminal domain Metalloproteases ("zincins"), catalytic domain 43
E set domains Glycosyl hydrolase domain 42
Zn-dependent exopeptidases Bacterial exopeptidase dimerisation domain 41
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheW-like 43
Ribosomal protein S5 domain 2-like P-loop containing nucleoside triphosphate hydrolases 44
Galactose-binding domain-like beta-Galactosidase/glucuronidase domain 42
PLP-binding barrel Alanine racemase C-terminal domain-like 44
EspE N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 42
Formate dehydrogenase/DMSO reductase, domains 1-3 ADC-like 44
Calcium-dependent phosphotriesterase Nucleotide cyclase 43
DNA ligase/mRNA capping enzyme, catalytic domain Nucleic acid-binding proteins 43
P-loop containing nucleoside triphosphate hydrolases EF-G C-terminal domain-like 44
P-loop containing nucleoside triphosphate hydrolases Restriction endonuclease-like 44
beta-Galactosidase/glucuronidase domain (Trans)glycosidases 42
EF-G C-terminal domain-like EF-G C-terminal domain-like 33
Translation proteins EF-G C-terminal domain-like 33
Flavoproteins Ferredoxin reductase-like, C-terminal NADP-linked domain 31
Flavoproteins Riboflavin synthase domain-like 31
Calcium-dependent phosphotriesterase Homodimeric domain of signal transducing histidine kinase 33
alpha/beta-Hydrolases alpha/beta-Hydrolases 32
HD-domain/PDEase-like Nucleotidyltransferase 32
Riboflavin synthase domain-like 2Fe-2S ferredoxin-like 31
P-loop containing nucleoside triphosphate hydrolases EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 32
ValRS/IleRS/LeuRS editing domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 32
HlyD-like secretion proteins HlyD-like secretion proteins 33
Phosphoglucomutase, first 3 domains Phosphoglucomutase, first 3 domains 31
RmlC-like cupins Homeodomain-like 32
Nucleotidyltransferase ACT-like 32
"Winged helix" DNA-binding domain Chorismate lyase-like 31
(Trans)glycosidases Anthrax protective antigen 32
HD-domain/PDEase-like ACT-like 32
DNA methylase specificity domain DNA methylase specificity domain 31
CO dehydrogenase molybdoprotein N-domain-like Molybdenum cofactor-binding domain 31
CheY-like HD-domain/PDEase-like 32
P-loop containing nucleoside triphosphate hydrolases post-AAA+ oligomerization domain-like 32
Nucleic acid-binding proteins RuvA domain 2-like 33
Single hybrid motif CoA-dependent acyltransferases 33
PYP-like sensor domain (PAS domain) Homeodomain-like 32
"Winged helix" DNA-binding domain "Winged helix" DNA-binding domain 33
Single hybrid motif Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 33
Glutamine synthetase, N-terminal domain Glutamine synthetase/guanido kinase 31
LeuD/IlvD-like Aconitase iron-sulfur domain 33
beta-N-acetylhexosaminidase-like domain (Trans)glycosidases 32
GAF domain-like EAL domain-like 32
PYP-like sensor domain (PAS domain) Methyl-accepting chemotaxis protein (MCP) signaling domain 33
Triger factor/SurA peptide-binding domain-like FKBP-like 33
Homodimeric domain of signal transducing histidine kinase CheW-like 32
P-loop containing nucleoside triphosphate hydrolases MOP-like 31
Translation proteins EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 32
PDZ domain-like PDZ domain-like 32
Fe,Mn superoxide dismutase (SOD), N-terminal domain Fe,Mn superoxide dismutase (SOD), C-terminal domain 31
Class II aaRS and biotin synthetases Class II aaRS ABD-related 33
NAD(P)-binding Rossmann-fold domains ACT-like 33
Phosphohistidine domain Phosphoenolpyruvate/pyruvate domain 33
Calcium-dependent phosphotriesterase CheY-like 33
P-loop containing nucleoside triphosphate hydrolases Class I glutamine amidotransferase-like 31
PA domain Zn-dependent exopeptidases 31
Galactose-binding domain-like Galactose-binding domain-like 32
Ferredoxin reductase-like, C-terminal NADP-linked domain 2Fe-2S ferredoxin-like 31
CheY-like EAL domain-like 33
Diaminopimelate epimerase-like Diaminopimelate epimerase-like 31
"Winged helix" DNA-binding domain GAF domain-like 31
PurM N-terminal domain-like PurM C-terminal domain-like 32
CheY-like Nucleotide cyclase 33
CBS-domain pair FAD-binding/transporter-associated domain-like 31
Lysozyme-like beta-lactamase/transpeptidase-like 32
FAD/NAD(P)-binding domain FAD/NAD-linked reductases, dimerisation (C-terminal) domain 31
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex CoA-dependent acyltransferases 33
Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like 33
"Winged helix" DNA-binding domain Dimeric alpha+beta barrel 31
Phosphoglucomutase, first 3 domains Phosphoglucomutase, C-terminal domain 31
ValRS/IleRS/LeuRS editing domain Nucleotidylyl transferase 32
Translation proteins SH3-like domain Nucleic acid-binding proteins 32
Nitrite/Sulfite reductase N-terminal domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 22
MurE/MurF N-terminal domain MurD-like peptide ligases, catalytic domain 21
"Winged helix" DNA-binding domain GntR ligand-binding domain-like 21
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphoenolpyruvate/pyruvate domain 22
Ribosomal protein S5 domain 2-like Type II DNA topoisomerase 22
FabD/lysophospholipase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 21
CorA soluble domain-like Magnesium transport protein CorA, transmembrane region 21
Cation efflux protein transmembrane domain-like Cation efflux protein cytoplasmic domain-like 21
Mechanosensitive channel protein MscS (YggB), transmembrane region Sm-like ribonucleoproteins 22
Nucleotidyltransferase Poly A polymerase C-terminal region-like 21
P-loop containing nucleoside triphosphate hydrolases TPR-like 22
IlvD/EDD N-terminal domain-like LeuD/IlvD-like 21
Nucleotidyltransferase Nucleotidyltransferase substrate binding subunit/domain 22
NagB/RpiA/CoA transferase-like NagB/RpiA/CoA transferase-like 22
HAMP domain-like Nucleotide cyclase 21
ClpP/crotonase ClpP/crotonase 22
TGS-like ACT-like 21
2Fe-2S ferredoxin-like Formate dehydrogenase/DMSO reductase, domains 1-3 22
MoeA N-terminal region -like MoeA C-terminal domain-like 21
RuvA domain 2-like RuvA domain 2-like 22
"Winged helix" DNA-binding domain LexA/Signal peptidase 21
P-loop containing nucleoside triphosphate hydrolases "Winged helix" DNA-binding domain 22
CheW-like CheY-like 22
ClpP/crotonase 6-phosphogluconate dehydrogenase C-terminal domain-like 22
"Winged helix" DNA-binding domain Actin-like ATPase domain 21
GreA transcript cleavage protein, N-terminal domain FKBP-like 21
Mechanosensitive channel protein MscS (YggB), transmembrane region Mechanosensitive channel protein MscS (YggB), C-terminal domain 22
Lysozyme-like LysM domain 21
Ribosomal protein S5 domain 2-like Ribonuclease PH domain 2-like 22
beta-Galactosidase/glucuronidase domain beta-Galactosidase/glucuronidase domain 21
Sensory domain-like Homodimeric domain of signal transducing histidine kinase 22
HSP40/DnaJ peptide-binding domain HSP40/DnaJ peptide-binding domain 22
Nucleotidyltransferase TGS-like 21
Beta-D-glucan exohydrolase, C-terminal domain Anthrax protective antigen 21
Trypsin-like serine proteases PDZ domain-like 21
Double Clp-N motif P-loop containing nucleoside triphosphate hydrolases 22
Ribosomal protein S5 domain 2-like EF-G C-terminal domain-like 22
L30e-like alpha/beta knot 21
2Fe-2S ferredoxin-like 4Fe-4S ferredoxins 22
GAF domain-like CheY-like 22
Galactose-binding domain-like Six-hairpin glycosidases 22
2Fe-2S ferredoxin-like ADC-like 22
Chaperone J-domain HSP40/DnaJ peptide-binding domain 22
6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 22
MgtE N-terminal domain-like MgtE membrane domain-like 21
Subtilisin-like Autotransporter 21
FAD/NAD(P)-binding domain HI0933 insert domain-like 21
CBS-domain pair MgtE membrane domain-like 21
FAD/NAD(P)-binding domain FAD/NAD(P)-binding domain 21
MurE/MurF N-terminal domain MurD-like peptide ligases, peptide-binding domain 21
Sensory domain-like HAMP domain-like 21
Ribosomal protein S5 domain 2-like GHMP Kinase, C-terminal domain 21
NAD(P)-binding Rossmann-fold domains Tetrapyrrole methylase 22
HD-domain/PDEase-like TGS-like 21
Carbamate kinase-like ACT-like 22
N-terminal domain of alpha and beta subunits of F1 ATP synthase P-loop containing nucleoside triphosphate hydrolases 21
Peptidase/esterase 'gauge' domain alpha/beta-Hydrolases 21
GroES-like GroES-like 21
TPR-like Nucleotide cyclase 22
PDZ domain-like ClpP/crotonase 21
cAMP-binding domain-like "Winged helix" DNA-binding domain 21
Sensory domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 22
P-loop containing nucleoside triphosphate hydrolases Glucocorticoid receptor-like (DNA-binding domain) 22
Sm-like ribonucleoproteins Mechanosensitive channel protein MscS (YggB), C-terminal domain 22
Galactose-binding domain-like SGNH hydrolase 21
TPR-like TPR-like 22
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphohistidine domain 22
MurCD N-terminal domain MurD-like peptide ligases, peptide-binding domain 21
ISP domain Bet v1-like 21
alpha/beta-Hydrolases Galactose-binding domain-like 22
C-terminal effector domain of the bipartite response regulators TPR-like 22
FAD-binding/transporter-associated domain-like FAD-linked oxidases, C-terminal domain 21
Type II DNA topoisomerase GyrA/ParC C-terminal domain-like 22
NAD(P)-binding Rossmann-fold domains UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 21
Molybdenum cofactor biosynthesis proteins MoeA C-terminal domain-like 21
C-terminal effector domain of the bipartite response regulators P-loop containing nucleoside triphosphate hydrolases 22
4Fe-4S ferredoxins Formate dehydrogenase/DMSO reductase, domains 1-3 22
Nucleic acid-binding proteins P-loop containing nucleoside triphosphate hydrolases 22
ThrRS/AlaRS common domain Class II aaRS and biotin synthetases 22
HAMP domain-like EAL domain-like 21
4Fe-4S ferredoxins ADC-like 22
Creatinase/prolidase N-terminal domain Creatinase/aminopeptidase 21
N-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase 21
TrkA C-terminal domain-like TrkA C-terminal domain-like 21
Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 22
Galactose mutarotase-like Six-hairpin glycosidases 22
Thiamin diphosphate-binding fold (THDP-binding) DHS-like NAD/FAD-binding domain 21
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Adenine nucleotide alpha hydrolases-like 21
Glutathione synthetase ATP-binding domain-like Succinyl-CoA synthetase domains 22
Cytochrome c oxidase subunit II-like, transmembrane region Cupredoxins 22
Regulatory protein AraC Homeodomain-like 21
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Type II DNA topoisomerase 22
GAF domain-like GAF domain-like 22
Penicillin binding protein dimerisation domain beta-lactamase/transpeptidase-like 21
MgtE N-terminal domain-like CBS-domain pair 21
P-loop containing nucleoside triphosphate hydrolases C-terminal domain of alpha and beta subunits of F1 ATP synthase 21
tRNA-binding arm Class II aaRS and biotin synthetases 21
Glycosyl hydrolases family 6, cellulases Fibronectin type III 22
FAD-binding/transporter-associated domain-like CO dehydrogenase flavoprotein C-terminal domain-like 21
NAD(P)-binding Rossmann-fold domains Succinyl-CoA synthetase domains 22
Nucleotide-diphospho-sugar transferases UDP-Glycosyltransferase/glycogen phosphorylase 22
CheY-like Methylesterase CheB, C-terminal domain 22
ClpP/crotonase NAD(P)-binding Rossmann-fold domains 22
2Fe-2S ferredoxin-like CO dehydrogenase ISP C-domain like 22
MurCD N-terminal domain MurD-like peptide ligases, catalytic domain 21
PIN domain-like 5' to 3' exonuclease, C-terminal subdomain 22
6-phosphogluconate dehydrogenase C-terminal domain-like UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 21
N-terminal domain of MutM-like DNA repair proteins S13-like H2TH domain 22
MoeA N-terminal region -like Molybdenum cofactor biosynthesis proteins 21
Nicotinate/Quinolinate PRTase N-terminal domain-like Nicotinate/Quinolinate PRTase C-terminal domain-like 21
PUA domain-like alpha/beta knot 11
Hsp33 domain HSP33 redox switch-like 11
PreATP-grasp domain Carbamoyl phosphate synthetase, large subunit connection domain 11
HPr-like Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain 11
GIY-YIG endonuclease RuvA domain 2-like 11
Glutathione synthetase ATP-binding domain-like Single hybrid motif 11
Galactose mutarotase-like Anthrax protective antigen 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain II 11
Glutathione synthetase ATP-binding domain-like Methylglyoxal synthase-like 11
Ribonuclease PH domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
Single hybrid motif Single hybrid motif 11
HAMP domain-like PP2C-like 11
N-utilization substance G protein NusG, N-terminal domain Translation proteins SH3-like domain 11
Dihydropteroate synthetase-like Methionine synthase domain 11
FGAM synthase PurL, linker domain PurM C-terminal domain-like 11
Phosphoenolpyruvate/pyruvate domain PK C-terminal domain-like 11
Thioredoxin-like Rhodanese/Cell cycle control phosphatase 11
Dihydropteroate synthetase-like Methionine synthase activation domain-like 11
Ribonuclease PH domain 2-like Nucleic acid-binding proteins 11
DNA repair protein MutS, domain I P-loop containing nucleoside triphosphate hydrolases 11
Prokaryotic type I DNA topoisomerase Zinc beta-ribbon 11
Single hybrid motif FAD/NAD(P)-binding domain 11
ACT-like PLP-binding barrel 11
FGAM synthase PurL, linker domain Class I glutamine amidotransferase-like 11
C-terminal UvrC-binding domain of UvrB RuvA domain 2-like 11
DNA ligase/mRNA capping enzyme, catalytic domain RuvA domain 2-like 11
SH3-domain SH3-domain 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
TolB, N-terminal domain Tricorn protease N-terminal domain 11
Thioredoxin-like HesB-like domain 11
Aspartate/glutamate racemase Aspartate/glutamate racemase 11
Cupredoxins Carboxypeptidase regulatory domain-like 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase DNA mismatch repair protein MutL 11
Nitrite and sulphite reductase 4Fe-4S domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 11
P-loop containing nucleoside triphosphate hydrolases Hypothetical protein YjiA, C-terminal domain 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases Nucleic acid-binding proteins 11
dsRNA-binding domain-like Ribosomal protein S5 domain 2-like 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Alpha subunit of glutamate synthase, C-terminal domain 11
S-adenosyl-L-methionine-dependent methyltransferases Protein kinase-like (PK-like) 11
PPK N-terminal domain-like Phospholipase D/nuclease 11
TK C-terminal domain-like Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 11
Lysozyme-like PGBD-like 11
PGBD-like Galactose mutarotase-like 11
Rudiment single hybrid motif Single hybrid motif 11
Adhesin YadA, collagen-binding domain Pili subunits 11
PreATP-grasp domain PreATP-grasp domain 11
Galactose mutarotase-like Glycosyl hydrolase domain 11
(Trans)glycosidases Carbohydrate-binding domain 11
Nucleic acid-binding proteins GAD domain-like 11
Putative DNA-binding domain P-loop containing nucleoside triphosphate hydrolases 11
Trigger factor ribosome-binding domain Triger factor/SurA peptide-binding domain-like 11
Nucleotide-diphospho-sugar transferases Nucleotide-diphospho-sugar transferases 11
Thioredoxin-like NHL repeat 11
Class I glutamine amidotransferase-like Adenine nucleotide alpha hydrolases-like 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
TGS-like Class II aaRS and biotin synthetases 11
Nucleotidyltransferase substrate binding subunit/domain Nucleotidyltransferase substrate binding subunit/domain 11
Actin-like ATPase domain HD-domain/PDEase-like 11
Ribosomal protein L6 Ribosomal protein L6 11
Glutathione synthetase ATP-binding domain-like Acyl-CoA N-acyltransferases (Nat) 11
HesB-like domain Rhodanese/Cell cycle control phosphatase 11
SGNH hydrolase RmlC-like cupins 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase HSP90 C-terminal domain 11
Zinc beta-ribbon Prokaryotic SH3-related domain 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain III 11
Nucleotide-diphospho-sugar transferases Trimeric LpxA-like enzymes 11
cAMP-binding domain-like Nucleotide cyclase 11
Ribosomal L11/L12e N-terminal domain Ribosomal protein L11, C-terminal domain 11
PK beta-barrel domain-like Phosphoenolpyruvate/pyruvate domain 11
YVTN repeat-like/Quinoprotein amine dehydrogenase Homodimeric domain of signal transducing histidine kinase 11
Positive stranded ssRNA viruses DNase I-like 11
Subtilisin-like Collagen-binding domain 11
Nucleic acid-binding proteins BRCT domain 11
NAD(P)-binding Rossmann-fold domains Isocitrate/Isopropylmalate dehydrogenase-like 11
Nucleic acid-binding proteins Rad51 N-terminal domain-like 11
Nucleotide-binding domain FAD-linked reductases, C-terminal domain 11
Leukotriene A4 hydrolase N-terminal domain ARM repeat 11
CalX-like CalX-like 11
Rhodanese/Cell cycle control phosphatase Rhodanese/Cell cycle control phosphatase 11
Glutathione synthetase ATP-binding domain-like Phosphohistidine domain 11
Calcium ATPase, transduction domain A HAD-like 11
ACT-like Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 11
ThrRS/AlaRS common domain Class II aaRS ABD-related 11
NAD(P)-binding Rossmann-fold domains LDH C-terminal domain-like 11
Zinc beta-ribbon DNA primase core 11
Methionine synthase domain Cobalamin (vitamin B12)-binding domain 11
Galactose mutarotase-like Galactose mutarotase-like 11
Heme-dependent catalase-like Class I glutamine amidotransferase-like 11
Siroheme synthase middle domains-like Tetrapyrrole methylase 11
PHP14-like Phospholipase D/nuclease 11
Adenine nucleotide alpha hydrolases-like GMP synthetase C-terminal dimerisation domain 11
Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 11
Translation proteins PRC-barrel domain 11
Methylglyoxal synthase-like Cytidine deaminase-like 11
YVTN repeat-like/Quinoprotein amine dehydrogenase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Nucleotide-diphospho-sugar transferases RmlC-like cupins 11
PK beta-barrel domain-like PK C-terminal domain-like 11
NAD(P)-binding Rossmann-fold domains Glutathione synthetase ATP-binding domain-like 11
Rhodanese/Cell cycle control phosphatase Activating enzymes of the ubiquitin-like proteins 11
YjeF N-terminal domain-like Ribokinase-like 11
Succinyl-CoA synthetase domains Succinyl-CoA synthetase domains 11
Aconitase B, N-terminal domain Aconitase iron-sulfur domain 11
Sensory domain-like CheY-like 11
PUA domain-like S-adenosyl-L-methionine-dependent methyltransferases 11
PreATP-grasp domain Methylglyoxal synthase-like 11
Chemotaxis receptor methyltransferase CheR, N-terminal domain PYP-like sensor domain (PAS domain) 11
lambda integrase-like, N-terminal domain DNA breaking-rejoining enzymes 11
Carbamate kinase-like PUA domain-like 11
Phoshotransferase/anion transport protein HPr-like 11
N-terminal domain of bifunctional PutA protein FAD-linked oxidoreductase 11
Adenine nucleotide alpha hydrolases-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
P-loop containing nucleoside triphosphate hydrolases TrpR-like 11
Prokaryotic type KH domain (KH-domain type II) Prokaryotic type KH domain (KH-domain type II) 11
DNA/RNA polymerases Lesion bypass DNA polymerase (Y-family), little finger domain 11
Glycoside hydrolase/deacetylase TPR-like 11
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 11
Glutathione synthetase ATP-binding domain-like Phosphoenolpyruvate/pyruvate domain 11
Eukaryotic type KH-domain (KH-domain type I) Nucleic acid-binding proteins 11
Translation proteins Ribosomal protein S5 domain 2-like 11
Carbamate kinase-like NAD(P)-binding Rossmann-fold domains 11
Methionine synthase domain Methionine synthase activation domain-like 11
Ada DNA repair protein, N-terminal domain (N-Ada 10) TATA-box binding protein-like 11
Homeodomain-like Probable bacterial effector-binding domain 11
C-terminal effector domain of the bipartite response regulators DPP6 N-terminal domain-like 11
P-loop containing nucleoside triphosphate hydrolases Smc hinge domain 11
Elongation factor Ts (EF-Ts), dimerisation domain Elongation factor Ts (EF-Ts), dimerisation domain 11
DsbC/DsbG N-terminal domain-like Thioredoxin-like 11
PurS-like Class I glutamine amidotransferase-like 11
Ada DNA repair protein, N-terminal domain (N-Ada 10) DNA-glycosylase 11
RuvA domain 2-like DNA helicase RuvA subunit, C-terminal domain 11
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 11
GspK insert domain-like GspK insert domain-like 11
Formate/glycerate dehydrogenase catalytic domain-like ACT-like 11
PrpR receptor domain-like P-loop containing nucleoside triphosphate hydrolases 11
(Trans)glycosidases PHL pollen allergen 11
Homeodomain-like DNA-glycosylase 11
Carbon-nitrogen hydrolase Adenine nucleotide alpha hydrolases-like 11
TPR-like Homeodomain-like 11
alpha-helical ferredoxin Nucleotide-binding domain 11
P-loop containing nucleoside triphosphate hydrolases TRCF domain-like 11
HRDC-like HRDC-like 11
ACT-like Formyltransferase 11
PurS-like PurM N-terminal domain-like 11
Carbamoyl phosphate synthetase, large subunit connection domain Methylglyoxal synthase-like 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) ThrRS/AlaRS common domain 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Nucleotidylyl transferase 11
L domain-like Fic-like 11
Translation proteins Initiation factor IF2/eIF5b, domain 3 11
4'-phosphopantetheinyl transferase 4'-phosphopantetheinyl transferase 11
Periplasmic binding protein-like II ACT-like 11
Ribonuclease H-like DNA/RNA polymerases 11
CoA-dependent acyltransferases CoA-dependent acyltransferases 11
Aconitase B, N-terminal domain LeuD/IlvD-like 11
RBP11-like subunits of RNA polymerase C-terminal domain of RNA polymerase alpha subunit 11
Glutathione synthetase ATP-binding domain-like Glutathione synthetase ATP-binding domain-like 11
PIN domain-like DNA/RNA polymerases 11
Translation initiation factor IF3, N-terminal domain Translation initiation factor IF3, C-terminal domain 11
FMN-linked oxidoreductases FAD/NAD(P)-binding domain 11
P-loop containing nucleoside triphosphate hydrolases FtsH protease domain-like 11
Periplasmic binding protein-like II Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain 11
Glutathione synthetase ATP-binding domain-like Carbamoyl phosphate synthetase, large subunit connection domain 11
Nucleotidylyl transferase Nudix 11
Putative DNA-binding domain Translation proteins 11
P-loop containing nucleoside triphosphate hydrolases Prokaryotic type KH domain (KH-domain type II) 11
Adenine nucleotide alpha hydrolases-like PheT/TilS domain 11
Adenine nucleotide alpha hydrolases-like Argininosuccinate synthetase, C-terminal domain 11
RuvA domain 2-like BRCT domain 11
Ribosomal protein L7/12, oligomerisation (N-terminal) domain ClpS-like 11
HAMP domain-like PYP-like sensor domain (PAS domain) 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) PRTase-like 11
S-adenosyl-L-methionine-dependent methyltransferases Putative methyltransferase TM0872, insert domain 11
Cytochrome c Cytochrome c 11
Adhesin YadA, collagen-binding domain Adhesin YadA, collagen-binding domain 11
Phoshotransferase/anion transport protein Phosphoenolpyruvate/pyruvate domain 11
Nucleic acid-binding proteins DNA helicase RuvA subunit, C-terminal domain 11
Glycoside hydrolase/deacetylase Caspase-like 11
Ribonuclease H-like Nucleic acid-binding proteins 11
FAD/NAD(P)-binding domain Nitrite and sulphite reductase 4Fe-4S domain-like 11
alpha/beta-Hydrolases S-adenosyl-L-methionine-dependent methyltransferases 11
Thioredoxin-like Thioredoxin-like 11
PurS-like PurM C-terminal domain-like 11
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 11
N-terminal domain of MutM-like DNA repair proteins Glucocorticoid receptor-like (DNA-binding domain) 11
Fic-like "Winged helix" DNA-binding domain 11
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 Eukaryotic type KH-domain (KH-domain type I) 11
HesB-like domain Fe-S cluster assembly (FSCA) domain-like 11
DnaK suppressor protein DksA, alpha-hairpin domain Glucocorticoid receptor-like (DNA-binding domain) 11
DNA repair protein MutS, domain III P-loop containing nucleoside triphosphate hydrolases 11
Galactose mutarotase-like (Trans)glycosidases 11
PurM C-terminal domain-like PurM C-terminal domain-like 11
NAD(P)-binding Rossmann-fold domains Glutamyl tRNA-reductase dimerization domain 11
YajQ-like YajQ-like 11
YbaK/ProRS associated domain Class II aaRS ABD-related 11
Nucleotidylyl transferase Ribosomal protein L25-like 11
Sensory domain-like PYP-like sensor domain (PAS domain) 11
Ribosomal protein S5 domain 2-like DNA mismatch repair protein MutL 11
Phase 1 flagellin Phase 1 flagellin 11
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 11
P-loop containing nucleoside triphosphate hydrolases ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
(Trans)glycosidases Protein kinase-like (PK-like) 11
Anthrax protective antigen Glycosyl hydrolase domain 11
Tex N-terminal region-like Ribonuclease H-like 11
alpha/beta-Hydrolases Subtilisin-like 11
Ribonuclease PH domain 2-like Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 11
Ribonuclease PH domain 2-like Ribonuclease PH domain 2-like 11
S13-like H2TH domain Glucocorticoid receptor-like (DNA-binding domain) 11
Quinoprotein alcohol dehydrogenase-like Calcium-dependent phosphotriesterase 11
P-loop containing nucleoside triphosphate hydrolases Initiation factor IF2/eIF5b, domain 3 11
ATP-dependent DNA ligase DNA-binding domain DNA ligase/mRNA capping enzyme, catalytic domain 11
DnaJ/Hsp40 cysteine-rich domain HSP40/DnaJ peptide-binding domain 11
Actin-like ATPase domain Heat shock protein 70kD (HSP70), peptide-binding domain 11
TGS-like ThrRS/AlaRS common domain 11
PIN domain-like Ribonuclease H-like 11
TSP type-3 repeat OmpA-like 11
LuxS/MPP-like metallohydrolase LuxS/MPP-like metallohydrolase 11
Glutamyl tRNA-reductase catalytic, N-terminal domain NAD(P)-binding Rossmann-fold domains 11
Carbamate kinase-like Acyl-CoA N-acyltransferases (Nat) 11
FKBP-like FKBP-like 11
PheT/TilS domain Anticodon-binding domain of PheRS 11
Aldolase 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 11
Nudix Thiamin phosphate synthase 11
P-loop containing nucleoside triphosphate hydrolases PGBD-like 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
PYP-like sensor domain (PAS domain) Histidine-containing phosphotransfer domain, HPT domain 11
DNA repair protein MutS, domain II DNA repair protein MutS, domain III 11
HAMP domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
cAMP-binding domain-like FAD/NAD(P)-binding domain 11
Adenine nucleotide alpha hydrolases-like MesJ substrate recognition domain-like 11
Nitrite/Sulfite reductase N-terminal domain-like Nitrite/Sulfite reductase N-terminal domain-like 11
(Trans)glycosidases (Trans)glycosidases 11
"Winged helix" DNA-binding domain Class II aaRS and biotin synthetases 11
DNA clamp DNA clamp 11
S-adenosylmethionine synthetase S-adenosylmethionine synthetase 11
FAD/NAD(P)-binding domain 4Fe-4S ferredoxins 11
TATA-box binding protein-like DNA-glycosylase 11
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 Nucleic acid-binding proteins 11
PrpR receptor domain-like Homeodomain-like 11
Subtilisin-like Galactose-binding domain-like 11
GAF domain-like Homeodomain-like 11
Heme-dependent peroxidases Heme-dependent peroxidases 11
GIY-YIG endonuclease C-terminal UvrC-binding domain of UvrB 11
Nucleic acid-binding proteins S-adenosyl-L-methionine-dependent methyltransferases 11
Nqo1 FMN-binding domain-like Nqo1C-terminal domain-like 11
Epsilon subunit of F1F0-ATP synthase N-terminal domain Epsilon subunit of F1F0-ATP synthase C-terminal domain 11
Nucleotidyltransferase Nucleotidyltransferase 11
Methylesterase CheB, C-terminal domain S-adenosyl-L-methionine-dependent methyltransferases 11
CalX-like Cadherin-like 11
PreATP-grasp domain Single hybrid motif 11
YVTN repeat-like/Quinoprotein amine dehydrogenase Calcium-dependent phosphotriesterase 11
MesJ substrate recognition domain-like PheT/TilS domain 11
S-adenosyl-L-methionine-dependent methyltransferases S-adenosyl-L-methionine-dependent methyltransferases 11
OMPA-like OmpA-like 11
FMN-linked oxidoreductases Nucleotide-binding domain 11
Carbamate kinase-like Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 11
Folate-binding domain Aminomethyltransferase beta-barrel domain 11
(Trans)glycosidases Barwin-like endoglucanases 11
ATP-dependent DNA ligase DNA-binding domain Nucleic acid-binding proteins 11
ValRS/IleRS/LeuRS editing domain tRNA-binding arm 11
Thioredoxin-like FAD/NAD(P)-binding domain 11
Tryptophan synthase beta subunit-like PLP-dependent enzymes CBS-domain pair 11
Carbamate kinase-like Alanine racemase C-terminal domain-like 11
Rho N-terminal domain-like Nucleic acid-binding proteins 11
"Winged helix" DNA-binding domain S-adenosyl-L-methionine-dependent methyltransferases 11
vWA-like TPR-like 11
Insert subdomain of RNA polymerase alpha subunit RBP11-like subunits of RNA polymerase 11
Dihydropteroate synthetase-like Cobalamin (vitamin B12)-binding domain 11
R1 subunit of ribonucleotide reductase, N-terminal domain PFL-like glycyl radical enzymes 11
Porins Porins 11
Thioredoxin-like TPR-like 11
PurM N-terminal domain-like Class I glutamine amidotransferase-like 11
Calcium ATPase, transduction domain A Calcium ATPase, transmembrane domain M 11
2Fe-2S ferredoxin-like alpha-helical ferredoxin 11
HAD-like UDP-Glycosyltransferase/glycogen phosphorylase 11
P-loop containing nucleoside triphosphate hydrolases Adenine nucleotide alpha hydrolases-like 11
Nucleotidylyl transferase An anticodon-binding domain of class I aminoacyl-tRNA synthetases 11
Class I glutamine amidotransferase-like Homeodomain-like 11
Carbamate kinase-like PLP-binding barrel 11
Methylesterase CheB, C-terminal domain Chemotaxis receptor methyltransferase CheR, N-terminal domain 11
DNA-glycosylase Nudix 11
Purple acid phosphatase, N-terminal domain Metallo-dependent phosphatases 11
TGS-like Class II aaRS ABD-related 11
6-phosphogluconate dehydrogenase C-terminal domain-like ACT-like 11
Caspase-like TPR-like 11
Phoshotransferase/anion transport protein Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain 11
Clc chloride channel CBS-domain pair 11
Nucleotidylyl transferase tRNA-binding arm 11
P-loop containing nucleoside triphosphate hydrolases HRDC-like 11
CalX-like DNase I-like 11
Pre-protein crosslinking domain of SecA Helical scaffold and wing domains of SecA 11
S-adenosyl-L-methionine-dependent methyltransferases NAD(P)-binding Rossmann-fold domains 11
RNase III domain-like dsRNA-binding domain-like 11
Homo-oligomeric flavin-containing Cys decarboxylases, HFCD CoaB-like 11
Glutamyl tRNA-reductase catalytic, N-terminal domain Glutamyl tRNA-reductase dimerization domain 11
Class II aaRS and biotin synthetases YbaK/ProRS associated domain 11
Nqo1 middle domain-like Nqo1C-terminal domain-like 11
Resolvase-like Homeodomain-like 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) Translation proteins 11
CheC-like Surface presentation of antigens (SPOA) 11
Class II aaRS and biotin synthetases GAD domain-like 11
CoA-dependent acyltransferases ACP-like 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases tRNA-binding arm 11
DNA repair protein MutS, domain II P-loop containing nucleoside triphosphate hydrolases 11
HAD-like Ribosomal protein S5 domain 2-like 11
PurS-like FGAM synthase PurL, linker domain 11
Lysozyme-like Galactose mutarotase-like 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Nucleotidylyl transferase 11
Carboxypeptidase regulatory domain-like Porins 11
YhbC-like, N-terminal domain YhbC-like, C-terminal domain 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) SIS domain 11
P-loop containing nucleoside triphosphate hydrolases C-terminal UvrC-binding domain of UvrB 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase PP2C-like 11
Myosin rod fragments Duplicated hybrid motif 11
CBS-domain pair Inosine monophosphate dehydrogenase (IMPDH) 11
Chaperone J-domain DnaJ/Hsp40 cysteine-rich domain 11
PGBD-like L,D-transpeptidase catalytic domain-like 11
NagB/RpiA/CoA transferase-like D-ribose-5-phosphate isomerase (RpiA), lid domain 11
OMPA-like TSP type-3 repeat 11
E set domains Six-hairpin glycosidases 11
PTS system IIB component-like PTS system IIB component-like 11
Ribosomal protein S5 domain 2-like Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) FMN-linked oxidoreductases 11
Trigger factor ribosome-binding domain FKBP-like 11
Macro domain-like Zn-dependent exopeptidases 11
Tex N-terminal region-like RuvA domain 2-like 11
all-alpha NTP pyrophosphatases all-alpha NTP pyrophosphatases 11
PurM N-terminal domain-like PurM N-terminal domain-like 11
Cytidine deaminase-like Dihydrofolate reductase-like 11
N-terminal domain of DnaB helicase P-loop containing nucleoside triphosphate hydrolases 11
FAD-linked oxidoreductase ALDH-like 11
PIN domain-like P-loop containing nucleoside triphosphate hydrolases 11
P-loop containing nucleoside triphosphate hydrolases RecA protein, C-terminal domain 11
P-loop containing nucleoside triphosphate hydrolases Pre-protein crosslinking domain of SecA 11
Ankyrin repeat Ankyrin repeat 11
Trimeric LpxA-like enzymes RmlC-like cupins 11
Pectin lyase-like Autotransporter 11
Chorismate mutase II ACT-like 11
HAMP domain-like Homodimeric domain of signal transducing histidine kinase 11
Nucleic acid-binding proteins Putative DNA-binding domain 11
Galactose mutarotase-like E set domains 11
Metalloproteases ("zincins"), catalytic domain ARM repeat 11
FMN-linked oxidoreductases Alpha subunit of glutamate synthase, C-terminal domain 11
Succinyl-CoA synthetase domains Acyl-CoA N-acyltransferases (Nat) 11
PurM C-terminal domain-like Class I glutamine amidotransferase-like 11
CalX-like Autotransporter 11
"Winged helix" DNA-binding domain C-terminal domain of transcriptional repressors 11
Nucleotidylyl transferase Nucleic acid-binding proteins 11
NAD(P)-binding Rossmann-fold domains Siroheme synthase middle domains-like 11
Transcription factor NusA, N-terminal domain Prokaryotic type KH domain (KH-domain type II) 11
Voltage-gated potassium channels NAD(P)-binding Rossmann-fold domains 11
Ribosomal protein S5 domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
N-terminal domain of bifunctional PutA protein ALDH-like 11
P-loop containing nucleoside triphosphate hydrolases TGS-like 11
P-loop containing nucleoside triphosphate hydrolases Bacterial hemolysins 11
Phoshotransferase/anion transport protein Phosphohistidine domain 11
Class II aaRS and biotin synthetases Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) 11
YVTN repeat-like/Quinoprotein amine dehydrogenase CheY-like 11
Periplasmic binding protein-like II Ankyrin repeat 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Nucleic acid-binding proteins 11
Insert subdomain of RNA polymerase alpha subunit C-terminal domain of RNA polymerase alpha subunit 11
Phage fibre proteins Phage fibre proteins 11
Putative DNA-binding domain Initiation factor IF2/eIF5b, domain 3 11
Rad51 N-terminal domain-like Rad51 N-terminal domain-like 11
PPK N-terminal domain-like PHP14-like 11
Prokaryotic type KH domain (KH-domain type II) Ribosomal protein S3 C-terminal domain 11
PheT/TilS domain Class II aaRS and biotin synthetases 11
FAD-linked reductases, C-terminal domain 4Fe-4S ferredoxins 11
Ada DNA repair protein, N-terminal domain (N-Ada 10) Homeodomain-like 11
Nqo1 FMN-binding domain-like Nqo1 middle domain-like 11
Histidine-containing phosphotransfer domain, HPT domain Histidine-containing phosphotransfer domain, HPT domain 11
Pseudouridine synthase PUA domain-like 11
Calcium ATPase, transmembrane domain M HAD-like 11
UBA-like Elongation factor Ts (EF-Ts), dimerisation domain 11
Homeodomain-like TATA-box binding protein-like 11
Transcription factor NusA, N-terminal domain Rad51 N-terminal domain-like 11
Translation proteins Translation proteins 11
YrdC/RibB RibA-like 11
Methylesterase CheB, C-terminal domain PYP-like sensor domain (PAS domain) 11
Barwin-like endoglucanases PHL pollen allergen 11
GroEL equatorial domain-like GroEL apical domain-like 11
ACT-like Alanine racemase C-terminal domain-like 11
PUA domain-like Ribosomal protein S5 domain 2-like 11
beta-lactamase/transpeptidase-like Penicillin-binding protein associated domain 11
Coiled-coil domain of nucleotide exchange factor GrpE Head domain of nucleotide exchange factor GrpE 11
Glycosyl hydrolase domain Protein kinase-like (PK-like) 11
Nucleotidyltransferase substrate binding subunit/domain HD-domain/PDEase-like 11
TPR-like UDP-Glycosyltransferase/glycogen phosphorylase 11
Putative DNA-binding domain Anticodon-binding domain of PheRS 11
EspE N-terminal domain-like Nucleotide-diphospho-sugar transferases 11
P-loop containing nucleoside triphosphate hydrolases ACT-like 11
Obg GTP-binding protein N-terminal domain P-loop containing nucleoside triphosphate hydrolases 11
Thiamin diphosphate-binding fold (THDP-binding) Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 11
Periplasmic binding protein-like II MetI-like 11
FGAM synthase PurL, linker domain PurM N-terminal domain-like 11
Nucleic acid-binding proteins PheT/TilS domain 11
SGNH hydrolase SGNH hydrolase 11
P-loop containing nucleoside triphosphate hydrolases Signal peptide-binding domain 11
PUA domain-like P-loop containing nucleoside triphosphate hydrolases 11
Cadherin-like Cadherin-like 11
Nucleotidylyl transferase Riboflavin kinase-like 11
Zinc beta-ribbon DNA primase DnaG, C-terminal domain 11
Quinoprotein alcohol dehydrogenase-like CheY-like 11
SGNH hydrolase Autotransporter 11
Nucleotidylyl transferase Alpha-L RNA-binding motif 11
Oligoxyloglucan reducing end-specific cellobiohydrolase Oligoxyloglucan reducing end-specific cellobiohydrolase 11
Thioesterase/thiol ester dehydrase-isomerase Thioesterase/thiol ester dehydrase-isomerase 11
Class II aaRS and biotin synthetases Translation proteins 11
Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases 11
P-loop containing nucleoside triphosphate hydrolases Helical scaffold and wing domains of SecA 11
GroEL equatorial domain-like GroEL-intermediate domain like 11
P-loop containing nucleoside triphosphate hydrolases CarD-like 11
Bacterial muramidases Lysozyme-like 11
Putative DNA-binding domain Class II aaRS and biotin synthetases 11
NusB-like S-adenosyl-L-methionine-dependent methyltransferases 11
Nucleic acid-binding proteins Prokaryotic type KH domain (KH-domain type II) 11
HPr-like Phosphohistidine domain 11
SMI1/KNR4-like SMI1/KNR4-like 11
5' to 3' exonuclease, C-terminal subdomain DNA/RNA polymerases 11
PLP-dependent transferases PLP-dependent transferases 11
Tubulin nucleotide-binding domain-like Tubulin C-terminal domain-like 11
PheT/TilS domain Putative DNA-binding domain 11
Aminoacid dehydrogenase-like, N-terminal domain Isocitrate/Isopropylmalate dehydrogenase-like 11
HisI-like all-alpha NTP pyrophosphatases 11
CarD-like TRCF domain-like 11
Radical SAM enzymes RuvA domain 2-like 11
GroEL-intermediate domain like GroEL apical domain-like 11
Cobalamin (vitamin B12)-binding domain Methionine synthase activation domain-like 11
PYP-like sensor domain (PAS domain) P-loop containing nucleoside triphosphate hydrolases 11
PHP domain-like Nucleic acid-binding proteins 11
Pheromone-binding domain of LuxR-like quorum-sensing transcription factors C-terminal effector domain of the bipartite response regulators 11
Carbamoyl phosphate synthetase, small subunit N-terminal domain Class I glutamine amidotransferase-like 11
Positive stranded ssRNA viruses CalX-like 11
DNA primase core DNA primase DnaG, C-terminal domain 11
Ribosomal protein S5 domain 2-like HSP90 C-terminal domain 11
Nucleotidyltransferase substrate binding subunit/domain ACT-like 11
Cryptochrome/photolyase, N-terminal domain Cryptochrome/photolyase FAD-binding domain 11
Nucleotidylyl transferase YegP-like 11
P-loop containing nucleoside triphosphate hydrolases Homodimeric domain of signal transducing histidine kinase 11
ACP-like alpha/beta-Hydrolases 11
PHP domain-like P-loop containing nucleoside triphosphate hydrolases 11
FAD/NAD(P)-binding domain Nitrite/Sulfite reductase N-terminal domain-like 11
CoA-dependent acyltransferases Acetyl-CoA synthetase-like 11
NAD(P)-binding Rossmann-fold domains 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
DNA topoisomerase I domain DNA breaking-rejoining enzymes 11
Barwin-like endoglucanases Sporulation related repeat 11
Riboflavin synthase domain-like Riboflavin synthase domain-like 11
Class II aaRS and biotin synthetases C-terminal domain of transcriptional repressors 11
DPP6 N-terminal domain-like DPP6 N-terminal domain-like 11
CoA-dependent acyltransferases alpha/beta-Hydrolases 11
L9 N-domain-like Ribosomal protein L9 C-domain 11
GAF domain-like P-loop containing nucleoside triphosphate hydrolases 11
Adenine nucleotide alpha hydrolases-like DHS-like NAD/FAD-binding domain 11
Translation proteins ThrRS/AlaRS common domain 11
Transcription factor NusA, N-terminal domain Nucleic acid-binding proteins 11
Ribonuclease H-like RuvA domain 2-like 11
Nucleic acid-binding proteins ArfGap/RecO-like zinc finger 11
Formyltransferase FMT C-terminal domain-like 11
Thiol:disulfide interchange protein DsbD, N-terminal domain (DsbD-alpha) Thiol:disulfide interchange protein DsbD, N-terminal domain (DsbD-alpha) 11
FAD-binding/transporter-associated domain-like Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain 11
Transmembrane di-heme cytochromes a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 11
Tex N-terminal region-like Nucleic acid-binding proteins 11
Rho N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 11
NAD(P)-binding Rossmann-fold domains Acyl-CoA N-acyltransferases (Nat) 11
Methylated DNA-protein cysteine methyltransferase domain Methylated DNA-protein cysteine methyltransferase, C-terminal domain 11
Ribonuclease H-like HRDC-like 11
Prokaryotic type KH domain (KH-domain type II) Rad51 N-terminal domain-like 11
HPr-like Phosphoenolpyruvate/pyruvate domain 11
Smc hinge domain Bacterial hemolysins 11
Sporulation related repeat Sporulation related repeat 11
Nucleic acid-binding proteins Anticodon-binding domain of PheRS 11
Cadherin-like Autotransporter 11
MFS general substrate transporter Glycerol-3-phosphate (1)-acyltransferase 11
Chorismate mutase II Periplasmic binding protein-like II 11
Sensory domain-like Nucleotide cyclase 11
FliG FliG 11
Ribosomal protein S5 domain 2-like Nucleic acid-binding proteins 11
DNA ligase/mRNA capping enzyme, catalytic domain BRCT domain 11
S-adenosyl-L-methionine-dependent methyltransferases PYP-like sensor domain (PAS domain) 11
Nucleotide-binding domain FAD/NAD(P)-binding domain 11
Nucleotidyltransferase PAP/OAS1 substrate-binding domain 11
Quinoprotein alcohol dehydrogenase-like Homodimeric domain of signal transducing histidine kinase 11
5' to 3' exonuclease, C-terminal subdomain Ribonuclease H-like 11
HprK N-terminal domain-like PEP carboxykinase-like 11
Pectin lyase-like Pectin lyase-like 11
Acetyl-CoA synthetase-like alpha/beta-Hydrolases 11
Class II aaRS and biotin synthetases Anticodon-binding domain of PheRS 11
Class I glutamine amidotransferase-like GMP synthetase C-terminal dimerisation domain 11
Cupredoxins Cupredoxins 11
Thiol:disulfide interchange protein DsbD, N-terminal domain (DsbD-alpha) Thioredoxin-like 11
Adenine nucleotide alpha hydrolases-like Homodimeric domain of signal transducing histidine kinase 11
"Winged helix" DNA-binding domain NagB/RpiA/CoA transferase-like 11
Quinoprotein alcohol dehydrogenase-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Pili subunits GspK insert domain-like 11
Acetyl-CoA synthetase-like ACP-like 11

Jump to [ Top of page · Add/remove domain pairs · Add/remove genomes · Domain combination pairs ]