SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.


Domain combination pairs in Solanum lycopersicum v.2.3

All pairs of domain combinations at the superfamily level are listed here.
The identification of domain pairs does not account for the possibility of non-contiguous domains. Inserted, or interlaced, domains are seen as having a simple pair ordering.

  • For a list of unique full length architectures for this genome click here (can be slow).

Add or remove domain pairs

The links below permit the addition or removal of specific sets of domain combination pairs.


Jump to [ Top of page · Add/remove domain pairs · Domain combination pairs ]

Add or remove genomes

Change the list of genome two-letter codes in the 'Include genomes' box to include domain-pairs from those genomes.
Change the list of genomes in the 'Exclude genomes' box to exclude domain-pairs from those genomes.
List of all two-letter genome codes.

Add or remove genomes:
Include genomes:
Exclude genomes:


Jump to [ Top of page · Add/remove domain pairs · Add/remove genomes ]

Domain combination pairs

1511 domain combination pairs.
Click on a column heading to sort that column, or the 'View' button to see domain architetures for that domain pair combination.

Superfamily (N) Superfamily (C) Number of occurrances Number unique
L domain-like Protein kinase-like (PK-like) 23140
P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases 18653
P-loop containing nucleoside triphosphate hydrolases L domain-like 16330
L domain-like L domain-like 14057
RNI-like L domain-like 10350
RNA-binding domain, RBD RNA-binding domain, RBD 9123
F-box domain RNI-like 809
alpha-D-mannose-specific plant lectins Protein kinase-like (PK-like) 7312
Thioredoxin-like GST C-terminal domain-like 725
TPR-like TPR-like 6925
RNI-like Protein kinase-like (PK-like) 6023
Actin-like ATPase domain Actin-like ATPase domain 5916
Multidrug resistance efflux transporter EmrE Multidrug resistance efflux transporter EmrE 546
RING/U-box ARM repeat 539
Cupredoxins Cupredoxins 528
NAD(P)-binding Rossmann-fold domains GroES-like 505
ARM repeat ARM repeat 4827
Cyclin-like Cyclin-like 467
ABC transporter transmembrane region P-loop containing nucleoside triphosphate hydrolases 4512
Calcium ATPase, transduction domain A Calcium ATPase, transmembrane domain M 4211
HAD-like Calcium ATPase, transmembrane domain M 4111
Thiolase-like Thiolase-like 402
S-adenosyl-L-methionine-dependent methyltransferases S-adenosyl-L-methionine-dependent methyltransferases 395
Barwin-like endoglucanases PHL pollen allergen 391
Plant invertase/pectin methylesterase inhibitor Pectin lyase-like 382
Protein kinase-like (PK-like) EF-hand 373
Calcium ATPase, transduction domain A HAD-like 368
DNA-binding pseudobarrel domain DNA-binding pseudobarrel domain 369
RNI-like RNI-like 3619
Terpenoid cyclases/Protein prenyltransferases Terpenoid synthases 346
ABC transporter transmembrane region ABC transporter transmembrane region 326
Galactose-binding domain-like (Trans)glycosidases 3211
Voltage-gated potassium channels cAMP-binding domain-like 305
NAD(P)-binding Rossmann-fold domains 6-phosphogluconate dehydrogenase C-terminal domain-like 308
NAD(P)-binding Rossmann-fold domains Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 307
Homeodomain-like Homeodomain-like 2911
Bet v1-like Bet v1-like 297
CRAL/TRIO N-terminal domain CRAL/TRIO domain 297
Calcium ATPase, transmembrane domain M Metal cation-transporting ATPase, ATP-binding domain N 298
P-loop containing nucleoside triphosphate hydrolases Translation proteins 2910
DNA-binding domain DNA-binding domain 289
FAD/NAD(P)-binding domain FAD-linked reductases, C-terminal domain 289
Metal cation-transporting ATPase, ATP-binding domain N HAD-like 276
C2 domain (Calcium/lipid-binding domain, CaLB) C2 domain (Calcium/lipid-binding domain, CaLB) 2712
FAD/NAD(P)-binding domain FAD/NAD(P)-binding domain 276
Toll/Interleukin receptor TIR domain P-loop containing nucleoside triphosphate hydrolases 2615
Nucleic acid-binding proteins Nucleic acid-binding proteins 2619
beta-beta-alpha zinc fingers beta-beta-alpha zinc fingers 2611
RING/U-box RING/U-box 2515
Calcium ATPase, transduction domain A Metal cation-transporting ATPase, ATP-binding domain N 244
Homeodomain-like Bet v1-like 235
CCCH zinc finger CCCH zinc finger 2316
Subtilisin-like PA domain 223
Concanavalin A-like lectins/glucanases Protein kinase-like (PK-like) 224
Riboflavin synthase domain-like Ferredoxin reductase-like, C-terminal NADP-linked domain 229
Eukaryotic type KH-domain (KH-domain type I) Eukaryotic type KH-domain (KH-domain type I) 2216
Actin-like ATPase domain Heat shock protein 70kD (HSP70), peptide-binding domain 218
F-box domain Kelch motif 215
MFS general substrate transporter MFS general substrate transporter 213
HSP40/DnaJ peptide-binding domain HSP40/DnaJ peptide-binding domain 218
Toll/Interleukin receptor TIR domain L domain-like 2112
ENTH/VHS domain GAT-like domain 214
GroEL-intermediate domain like GroEL apical domain-like 204
Tubulin nucleotide-binding domain-like Tubulin C-terminal domain-like 204
(Trans)glycosidases Glycosyl hydrolase domain 208
RNI-like P-loop containing nucleoside triphosphate hydrolases 2013
Ypt/Rab-GAP domain of gyp1p Ypt/Rab-GAP domain of gyp1p 204
GroEL equatorial domain-like GroEL apical domain-like 194
P-loop containing nucleoside triphosphate hydrolases Nucleic acid-binding proteins 1910
Actin-like ATPase domain Heat shock protein 70kD (HSP70), C-terminal subdomain 196
Galactose-binding domain-like Galactose-binding domain-like 195
Aminoacid dehydrogenase-like, N-terminal domain NAD(P)-binding Rossmann-fold domains 195
CheY-like Homeodomain-like 194
GroEL equatorial domain-like GroEL-intermediate domain like 183
Thioredoxin-like Thioredoxin-like 1812
Phospholipase D/nuclease Phospholipase D/nuclease 187
Chaperone J-domain HSP40/DnaJ peptide-binding domain 187
ACT-like ACT-like 1812
Purple acid phosphatase, N-terminal domain Metallo-dependent phosphatases 183
Heat shock protein 70kD (HSP70), peptide-binding domain Heat shock protein 70kD (HSP70), C-terminal subdomain 185
(Trans)glycosidases Beta-D-glucan exohydrolase, C-terminal domain 183
Formate/glycerate dehydrogenase catalytic domain-like NAD(P)-binding Rossmann-fold domains 175
WD40 repeat-like WD40 repeat-like 179
Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) 174
HMA, heavy metal-associated domain HMA, heavy metal-associated domain 177
Homodimeric domain of signal transducing histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 167
GroES-like GroES-like 162
Cysteine-rich domain Cysteine-rich domain 167
Nucleotidyltransferase PAP/OAS1 substrate-binding domain 166
POZ domain Skp1 dimerisation domain-like 162
"Winged helix" DNA-binding domain S-adenosyl-L-methionine-dependent methyltransferases 161
Lipase/lipooxygenase domain (PLAT/LH2 domain) Lipoxigenase 152
PAZ domain Ribonuclease H-like 152
F-box domain Galactose oxidase, central domain 152
FYVE/PHD zinc finger FYVE/PHD zinc finger 158
Glucocorticoid receptor-like (DNA-binding domain) Glucocorticoid receptor-like (DNA-binding domain) 155
P-loop containing nucleoside triphosphate hydrolases RING/U-box 155
Adenine nucleotide alpha hydrolases-like Protein kinase-like (PK-like) 153
WRKY DNA-binding domain WRKY DNA-binding domain 153
Translation proteins EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 143
Ubiquitin-like Ubiquitin-like 147
P-loop containing nucleoside triphosphate hydrolases "Winged helix" DNA-binding domain 1412
RING/U-box Nucleotide-diphospho-sugar transferases 142
Zn-dependent exopeptidases Bacterial exopeptidase dimerisation domain 142
P-loop containing nucleoside triphosphate hydrolases FtsH protease domain-like 142
Double Clp-N motif P-loop containing nucleoside triphosphate hydrolases 147
P-loop containing nucleoside triphosphate hydrolases EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 143
C2 domain (Calcium/lipid-binding domain, CaLB) Phospholipase D/nuclease 133
PUA domain-like SET domain 133
Galactose mutarotase-like Galactose-binding domain-like 133
Starch-binding domain-like Galactose-binding domain-like 133
SNARE-like SNARE fusion complex 132
Periplasmic binding protein-like I Periplasmic binding protein-like II 132
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Ribosomal protein S5 domain 2-like 137
CBS-domain pair CBS-domain pair 137
ARM repeat Protein kinase-like (PK-like) 1312
TPR-like HCP-like 1310
DNA-binding pseudobarrel domain CAD & PB1 domains 132
RNase III domain-like dsRNA-binding domain-like 128
Cullin homology domain "Winged helix" DNA-binding domain 122
Nucleotidylyl transferase Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 128
GAF domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 124
NAD(P)-binding Rossmann-fold domains LDH C-terminal domain-like 121
Ubiquitin-like UBA-like 128
DNA/RNA polymerases Ribonuclease H-like 126
Galactose mutarotase-like Starch-binding domain-like 122
Thiamin diphosphate-binding fold (THDP-binding) TK C-terminal domain-like 122
UDP-Glycosyltransferase/glycogen phosphorylase HAD-like 114
Arabinanase/levansucrase/invertase Concanavalin A-like lectins/glucanases 112
Ribosomal protein S5 domain 2-like GHMP Kinase, C-terminal domain 114
FAS1 domain FAS1 domain 113
Class II aaRS and biotin synthetases Class II aaRS ABD-related 119
Homodimeric domain of signal transducing histidine kinase CheY-like 113
P-loop containing nucleoside triphosphate hydrolases EF-G C-terminal domain-like 116
P-loop containing nucleoside triphosphate hydrolases E set domains 115
DnaJ/Hsp40 cysteine-rich domain HSP40/DnaJ peptide-binding domain 115
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheY-like 113
Terpenoid cyclases/Protein prenyltransferases Terpenoid cyclases/Protein prenyltransferases 115
P-loop containing nucleoside triphosphate hydrolases post-AAA+ oligomerization domain-like 115
BRCT domain BRCT domain 117
Chaperone J-domain DnaJ/Hsp40 cysteine-rich domain 115
Galactose oxidase, central domain E set domains 112
Nucleic acid-binding proteins Translation proteins SH3-like domain 114
FAD-binding/transporter-associated domain-like FAD-linked oxidases, C-terminal domain 102
Translation proteins EF-G C-terminal domain-like 105
dsRNA-binding domain-like dsRNA-binding domain-like 107
Cullin repeat-like Cullin homology domain 101
N-terminal domain of alpha and beta subunits of F1 ATP synthase P-loop containing nucleoside triphosphate hydrolases 107
NTF2-like RNA-binding domain, RBD 102
vWA-like RING/U-box 104
P-loop containing nucleoside triphosphate hydrolases Ankyrin repeat 104
PAH2 domain PAH2 domain 106
Acyl-CoA dehydrogenase NM domain-like Acyl-CoA dehydrogenase C-terminal domain-like 105
Trypsin-like serine proteases PDZ domain-like 104
Protein kinase-like (PK-like) Protein kinase-like (PK-like) 109
TPR-like Protein kinase-like (PK-like) 104
RNA-binding domain, RBD Retrovirus zinc finger-like domains 105
Thioesterase/thiol ester dehydrase-isomerase Thioesterase/thiol ester dehydrase-isomerase 103
HCP-like HCP-like 106
Cullin repeat-like "Winged helix" DNA-binding domain 101
P-loop containing nucleoside triphosphate hydrolases Ribosomal protein S5 domain 2-like 108
Protein kinase-like (PK-like) RING/U-box 104
F-box domain Tubby C-terminal domain-like 103
PK beta-barrel domain-like Phosphoenolpyruvate/pyruvate domain 102
EF-G C-terminal domain-like EF-G C-terminal domain-like 105
CHY zinc finger-like Zinc hairpin stack 93
DNA repair protein MutS, domain III P-loop containing nucleoside triphosphate hydrolases 99
PYP-like sensor domain (PAS domain) PYP-like sensor domain (PAS domain) 94
CCCH zinc finger RNA-binding domain, RBD 94
Thiamin diphosphate-binding fold (THDP-binding) DHS-like NAD/FAD-binding domain 92
PK beta-barrel domain-like PK C-terminal domain-like 91
Clc chloride channel CBS-domain pair 93
PreATP-grasp domain Glutathione synthetase ATP-binding domain-like 98
P-loop containing nucleoside triphosphate hydrolases dsRNA-binding domain-like 95
CO dehydrogenase ISP C-domain like CO dehydrogenase molybdoprotein N-domain-like 92
vWA-like beta-sandwich domain of Sec23/24 94
FYVE/PHD zinc finger Acyl-CoA N-acyltransferases (Nat) 92
Zn-finger domain of Sec23/24 vWA-like 94
Zn-finger domain of Sec23/24 beta-sandwich domain of Sec23/24 94
Retrovirus zinc finger-like domains Ribonuclease H-like 94
LuxS/MPP-like metallohydrolase LuxS/MPP-like metallohydrolase 94
Cation efflux protein transmembrane domain-like Cation efflux protein cytoplasmic domain-like 94
Zn-finger domain of Sec23/24 Helical domain of Sec23/24 94
beta-sandwich domain of Sec23/24 Helical domain of Sec23/24 94
CO dehydrogenase flavoprotein C-terminal domain-like CO dehydrogenase molybdoprotein N-domain-like 92
RNase III domain-like RNase III domain-like 97
CHY zinc finger-like RING/U-box 93
FAD-binding/transporter-associated domain-like CO dehydrogenase molybdoprotein N-domain-like 92
RING/U-box FYVE/PHD zinc finger 96
ARM repeat WD40 repeat-like 98
CO dehydrogenase ISP C-domain like CO dehydrogenase flavoprotein C-terminal domain-like 92
RING/U-box TRAF domain-like 92
Protein kinase-like (PK-like) Ankyrin repeat 92
Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain SAICAR synthase-like 96
vWA-like Helical domain of Sec23/24 94
EF-hand EF-hand 95
CO dehydrogenase ISP C-domain like FAD-binding/transporter-associated domain-like 92
GAF domain-like Homodimeric domain of signal transducing histidine kinase 93
Phosphoenolpyruvate/pyruvate domain PK C-terminal domain-like 91
Plant lectins/antimicrobial peptides Lysozyme-like 92
YhbY-like YhbY-like 94
Ribosomal protein S5 domain 2-like Ribonuclease PH domain 2-like 95
Zinc hairpin stack RING/U-box 93
FAD-binding/transporter-associated domain-like CO dehydrogenase flavoprotein C-terminal domain-like 92
Glucocorticoid receptor-like (DNA-binding domain) AN1-like Zinc finger 81
Amine oxidase N-terminal region Amine oxidase N-terminal region 82
alpha-D-mannose-specific plant lectins alpha-D-mannose-specific plant lectins 86
Ankyrin repeat RING/U-box 83
CO dehydrogenase ISP C-domain like Molybdenum cofactor-binding domain 81
Calponin-homology domain, CH-domain P-loop containing nucleoside triphosphate hydrolases 84
vWA-like C-terminal, gelsolin-like domain of Sec23/24 83
Ubiquitin-like Zn-binding ribosomal proteins 81
ARM repeat Sec7 domain 84
P-loop containing nucleoside triphosphate hydrolases C-terminal domain of alpha and beta subunits of F1 ATP synthase 85
Actin depolymerizing proteins Actin depolymerizing proteins 86
PH domain-like FYVE/PHD zinc finger 82
Ran binding protein zinc finger-like Ran binding protein zinc finger-like 87
CO dehydrogenase flavoprotein C-terminal domain-like Molybdenum cofactor-binding domain 81
beta-sandwich domain of Sec23/24 C-terminal, gelsolin-like domain of Sec23/24 83
2Fe-2S ferredoxin-like CO dehydrogenase ISP C-domain like 81
SNARE-like Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor 82
Toll/Interleukin receptor TIR domain "Winged helix" DNA-binding domain 87
FAD-binding/transporter-associated domain-like Molybdenum cofactor-binding domain 81
RCC1/BLIP-II FYVE/PHD zinc finger 82
2Fe-2S ferredoxin-like Molybdenum cofactor-binding domain 81
ValRS/IleRS/LeuRS editing domain Nucleotidylyl transferase 85
2Fe-2S ferredoxin-like FAD-binding/transporter-associated domain-like 81
2Fe-2S ferredoxin-like CO dehydrogenase molybdoprotein N-domain-like 81
"Winged helix" DNA-binding domain L domain-like 87
(Phosphotyrosine protein) phosphatases II C2 domain (Calcium/lipid-binding domain, CaLB) 84
2Fe-2S ferredoxin-like CO dehydrogenase flavoprotein C-terminal domain-like 81
CO dehydrogenase molybdoprotein N-domain-like Molybdenum cofactor-binding domain 81
Helical domain of Sec23/24 C-terminal, gelsolin-like domain of Sec23/24 83
Zn-finger domain of Sec23/24 C-terminal, gelsolin-like domain of Sec23/24 83
PH domain-like RCC1/BLIP-II 82
FAD/NAD(P)-binding domain FAD/NAD-linked reductases, dimerisation (C-terminal) domain 83
Galactose mutarotase-like (Trans)glycosidases 85
Amine oxidase N-terminal region Amine oxidase catalytic domain 82
ADC-like Cdc48 domain 2-like 72
TPR-like Thioredoxin-like 76
Glutamine synthetase, N-terminal domain Glutamine synthetase/guanido kinase 73
ISP domain Bet v1-like 72
Cdc48 domain 2-like P-loop containing nucleoside triphosphate hydrolases 72
N-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase 74
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase HSP90 C-terminal domain 72
EF-hand Ferredoxin reductase-like, C-terminal NADP-linked domain 71
E set domains Ankyrin repeat 72
Nucleic acid-binding proteins Class II aaRS and biotin synthetases 76
P-loop containing nucleoside triphosphate hydrolases RNase III domain-like 75
Single hybrid motif CoA-dependent acyltransferases 75
P-loop containing nucleoside triphosphate hydrolases EF-hand 73
Chromo domain-like Chromo domain-like 75
Ribosomal protein S5 domain 2-like HSP90 C-terminal domain 72
PIN domain-like 5' to 3' exonuclease, C-terminal subdomain 73
6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 72
"Winged helix" DNA-binding domain "Winged helix" DNA-binding domain 75
EF-hand Riboflavin synthase domain-like 71
Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 71
Cryptochrome/photolyase, N-terminal domain Cryptochrome/photolyase FAD-binding domain 73
TRAF domain-like POZ domain 72
EF-G C-terminal domain-like Ribosomal protein S5 domain 2-like 75
Enolase N-terminal domain-like Enolase C-terminal domain-like 73
cAMP-binding domain-like Ankyrin repeat 71
Glutathione synthetase ATP-binding domain-like Rudiment single hybrid motif 76
Sigma2 domain of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 71
GroEL apical domain-like SAICAR synthase-like 74
POZ domain Ankyrin repeat 73
Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 74
PLC-like phosphodiesterases C2 domain (Calcium/lipid-binding domain, CaLB) 73
EF-hand C2 domain (Calcium/lipid-binding domain, CaLB) 73
Voltage-gated potassium channels Voltage-gated potassium channels 74
Voltage-gated potassium channels Ankyrin repeat 71
"Winged helix" DNA-binding domain RNA-binding domain, RBD 72
P-loop containing nucleoside triphosphate hydrolases FYVE/PHD zinc finger 76
Plant proteinase inhibitors Plant proteinase inhibitors 74
Nucleotide-diphospho-sugar transferases Trimeric LpxA-like enzymes 73
ADC-like P-loop containing nucleoside triphosphate hydrolases 72
F1F0 ATP synthase subunit C F1F0 ATP synthase subunit C 71
P-loop containing nucleoside triphosphate hydrolases PAZ domain 64
DPP6 N-terminal domain-like alpha/beta-Hydrolases 62
Retrovirus zinc finger-like domains Retrovirus zinc finger-like domains 65
"Winged helix" DNA-binding domain E2F-DP heterodimerization region 64
Protein kinase-like (PK-like) WD40 repeat-like 64
HMA, heavy metal-associated domain Calcium ATPase, transduction domain A 65
PAZ domain RNase III domain-like 64
RING/U-box WD40 repeat-like 63
Translation proteins Ribosomal protein S5 domain 2-like 64
Sec63 N-terminal domain-like E set domains 64
F-box domain L domain-like 64
PAP/OAS1 substrate-binding domain PAP/Archaeal CCA-adding enzyme, C-terminal domain 62
P-loop containing nucleoside triphosphate hydrolases Sec63 N-terminal domain-like 65
MurD-like peptide ligases, catalytic domain MurD-like peptide ligases, peptide-binding domain 65
FYVE/PHD zinc finger SET domain 65
P-loop containing nucleoside triphosphate hydrolases Smc hinge domain 65
PYP-like sensor domain (PAS domain) Protein kinase-like (PK-like) 62
SET domain RuBisCo LSMT C-terminal, substrate-binding domain 62
UBA-like UBA-like 64
FKBP-like FKBP-like 62
ClpP/crotonase 6-phosphogluconate dehydrogenase C-terminal domain-like 61
SWIB/MDM2 domain Plus3-like 65
DNA ligase/mRNA capping enzyme, catalytic domain Nucleic acid-binding proteins 64
Voltage-gated potassium channels EF-hand 63
Translational machinery components L30e-like 62
E set domains Glycosyl hydrolase domain 63
Cysteine proteinases Granulin repeat 62
Acid proteases Saposin 62
Transducin (alpha subunit), insertion domain P-loop containing nucleoside triphosphate hydrolases 63
GAF domain-like CheY-like 61
Protease propeptides/inhibitors Subtilisin-like 63
HMA, heavy metal-associated domain Calcium ATPase, transmembrane domain M 65
PYP-like sensor domain (PAS domain) ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 63
E set domains (Trans)glycosidases 63
EF-hand PLC-like phosphodiesterases 62
FKBP-like TPR-like 62
Homeodomain-like FAD/NAD(P)-binding domain 63
Nucleic acid-binding proteins Retrovirus zinc finger-like domains 64
Nucleotidyltransferase Poly A polymerase C-terminal region-like 62
ValRS/IleRS/LeuRS editing domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 63
ClpP/crotonase NAD(P)-binding Rossmann-fold domains 61
HLH, helix-loop-helix DNA-binding domain ACT-like 62
EGF/Laminin Protein kinase-like (PK-like) 63
beta-beta-alpha zinc fingers Ribonuclease H-like 63
Nucleotidyltransferase PAP/Archaeal CCA-adding enzyme, C-terminal domain 62
GAF domain-like GAF domain-like 52
ThrRS/AlaRS common domain Class II aaRS and biotin synthetases 54
TRAF domain-like Cysteine proteinases 52
Domain of poly(ADP-ribose) polymerase ADP-ribosylation 54
Homeodomain-like "Winged helix" DNA-binding domain 52
P-loop containing nucleoside triphosphate hydrolases Initiation factor IF2/eIF5b, domain 3 52
POZ domain TAZ domain 52
HMA, heavy metal-associated domain HAD-like 54
P-loop containing nucleoside triphosphate hydrolases TGS-like 53
PLP-binding barrel Alanine racemase C-terminal domain-like 53
PYP-like sensor domain (PAS domain) GAF domain-like 52
RNA-binding domain, RBD PABC (PABP) domain 53
F-box domain WD40 repeat-like 52
PAZ domain dsRNA-binding domain-like 53
WGR domain-like Domain of poly(ADP-ribose) polymerase 54
Translation initiation factor 2 beta, aIF2beta, N-terminal domain Zinc-binding domain of translation initiation factor 2 beta 52
Initiation factor IF2/eIF5b, domain 3 Translation proteins 52
CAD & PB1 domains Protein kinase-like (PK-like) 51
Ribosomal L11/L12e N-terminal domain Ribosomal protein L11, C-terminal domain 52
Peptidase/esterase 'gauge' domain alpha/beta-Hydrolases 52
TPR-like CAD & PB1 domains 53
PreATP-grasp domain Rudiment single hybrid motif 54
Chromo domain-like P-loop containing nucleoside triphosphate hydrolases 53
HD-domain/PDEase-like Nucleotidyltransferase 53
FYVE/PHD zinc finger GroEL apical domain-like 52
Single hybrid motif Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 53
Homeodomain-like FAD-linked reductases, C-terminal domain 52
F-box domain F-box domain 54
ARM repeat Hect, E3 ligase catalytic domain 54
WGR domain-like ADP-ribosylation 54
Eukaryotic RPB5 N-terminal domain RPB5-like RNA polymerase subunit 51
Concanavalin A-like lectins/glucanases P-domain of calnexin/calreticulin 51
FYVE/PHD zinc finger SAICAR synthase-like 52
ARM repeat Clathrin adaptor appendage domain 54
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex CoA-dependent acyltransferases 53
ACT-like Protein kinase-like (PK-like) 51
Galactose mutarotase-like Glycosyl hydrolase domain 52
Ubiquitin-like BAG domain 52
Ribosomal protein L6 Ribosomal protein L6 52
RING/U-box Cysteine proteinases 54
NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains 54
Phosphoglucomutase, first 3 domains Phosphoglucomutase, first 3 domains 54
Ribosomal protein L7/12, oligomerisation (N-terminal) domain ClpS-like 51
NAD(P)-binding Rossmann-fold domains ACT-like 53
Fe,Mn superoxide dismutase (SOD), N-terminal domain Fe,Mn superoxide dismutase (SOD), C-terminal domain 53
Thioredoxin-like Ubiquitin-like 53
Adenine nucleotide alpha hydrolases-like RING/U-box 51
FYVE/PHD zinc finger TAZ domain 42
2Fe-2S ferredoxin-like alpha-helical ferredoxin 42
RmlC-like cupins RmlC-like cupins 42
Ubiquitin-like Hect, E3 ligase catalytic domain 42
Ubiquitin-like Protein kinase-like (PK-like) 41
PGBD-like Metalloproteases ("zincins"), catalytic domain 41
P-loop containing nucleoside triphosphate hydrolases Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain 42
Zinc-binding domain of translation initiation factor 2 beta ARM repeat 41
WD40 repeat-like Quinoprotein alcohol dehydrogenase-like 44
Kelch motif Metallo-dependent phosphatases 41
S-adenosylmethionine synthetase S-adenosylmethionine synthetase 41
RING/U-box RNA-binding domain, RBD 41
ARM repeat TPR-like 43
FAD/NAD(P)-binding domain EF-hand 41
ClpP/crotonase ClpP/crotonase 43
WW domain WW domain 44
NAD(P)-binding Rossmann-fold domains UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 42
Acyl-CoA dehydrogenase C-terminal domain-like Acyl-CoA dehydrogenase C-terminal domain-like 42
DNA repair protein MutS, domain II P-loop containing nucleoside triphosphate hydrolases 44
Ubiquitin-like XPC-binding domain 42
PH domain-like Oxysterol-binding protein-like 42
ARM repeat Tudor/PWWP/MBT 42
FYVE/PHD zinc finger SWIB/MDM2 domain 43
dsRNA-binding domain-like Ribosomal protein S5 domain 2-like 41
N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 L30e-like 41
ArfGap/RecO-like zinc finger Ankyrin repeat 44
PurM N-terminal domain-like PurM C-terminal domain-like 44
BAR/IMD domain-like SH3-domain 41
Tryptophan synthase beta subunit-like PLP-dependent enzymes ACT-like 43
E set domains AMPKBI-like 41
NAD(P)-binding Rossmann-fold domains Aldolase 42
Clathrin adaptor appendage domain Subdomain of clathrin and coatomer appendage domain 44
FYVE/PHD zinc finger Plus3-like 43
PapD-like Ankyrin repeat 42
N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 Translational machinery components 41
Obg GTP-binding protein N-terminal domain P-loop containing nucleoside triphosphate hydrolases 44
PH domain-like Ankyrin repeat 44
Translation initiation factor 2 beta, aIF2beta, N-terminal domain ARM repeat 41
Ribosomal protein S3 C-terminal domain Ribosomal protein L16p/L10e 44
CCCH zinc finger Eukaryotic type KH-domain (KH-domain type I) 42
UBA-like XPC-binding domain 42
P-loop containing nucleoside triphosphate hydrolases PRTase-like 41
ARID-like HMG-box 43
Kelch motif Kelch motif 44
Acyl-CoA N-acyltransferases (Nat) Acyl-CoA N-acyltransferases (Nat) 41
Actin depolymerizing proteins VHP, Villin headpiece domain 42
Glutathione synthetase ATP-binding domain-like Succinyl-CoA synthetase domains 41
NAD-binding domain of HMG-CoA reductase Substrate-binding domain of HMG-CoA reductase 42
TPR-like Chaperone J-domain 43
Insert subdomain of RNA polymerase alpha subunit RBP11-like subunits of RNA polymerase 42
UDP-Glycosyltransferase/glycogen phosphorylase UDP-Glycosyltransferase/glycogen phosphorylase 42
Composite domain of metallo-dependent hydrolases Metallo-dependent hydrolases 43
6-phosphogluconate dehydrogenase C-terminal domain-like UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 42
Retrovirus zinc finger-like domains DNA/RNA polymerases 42
HAD-like Glycerol-3-phosphate (1)-acyltransferase 41
Leukotriene A4 hydrolase N-terminal domain Metalloproteases ("zincins"), catalytic domain 44
RCC1/BLIP-II Protein kinase-like (PK-like) 43
Periplasmic binding protein-like II ACT-like 41
RING/U-box TAZ domain 42
Class I glutamine amidotransferase-like Class I glutamine amidotransferase-like 42
DNA repair protein MutS, domain I P-loop containing nucleoside triphosphate hydrolases 44
PH domain-like Bet v1-like 42
Cyclophilin-like RNA-binding domain, RBD 42
HIT/MYND zinc finger-like Cysteine proteinases 42
BEACH domain WD40 repeat-like 43
Domain of the SRP/SRP receptor G-proteins P-loop containing nucleoside triphosphate hydrolases 43
Phosphoglucomutase, first 3 domains Phosphoglucomutase, C-terminal domain 43
Plant lectins/antimicrobial peptides Plant lectins/antimicrobial peptides 43
DNA repair protein MutS, domain II DNA repair protein MutS, domain III 44
(Trans)glycosidases Chitinase insertion domain 42
PH domain-like ArfGap/RecO-like zinc finger 44
ENT-like Tudor/PWWP/MBT 43
FYVE/PHD zinc finger Homeodomain-like 43
P-loop containing nucleoside triphosphate hydrolases ARM repeat 42
Ubiquitin-like Homeodomain-like 42
Creatinase/prolidase N-terminal domain Creatinase/aminopeptidase 43
PLC-like phosphodiesterases PLC-like phosphodiesterases 42
Prokaryotic type KH domain (KH-domain type II) Ribosomal protein S3 C-terminal domain 42
CBS-domain pair CAD & PB1 domains 42
ARM repeat C2 domain (Calcium/lipid-binding domain, CaLB) 44
Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like 43
CCCH zinc finger RING/U-box 32
Families 57/38 glycoside transferase middle domain Galactose mutarotase-like 32
Formate/glycerate dehydrogenase catalytic domain-like Serine metabolism enzymes domain 32
PP2C-like Protein kinase-like (PK-like) 33
Actin-crosslinking proteins Actin-crosslinking proteins 32
Adenine nucleotide alpha hydrolases-like Thioredoxin-like 31
Trypsin-like serine proteases Trypsin-like serine proteases 32
DNA/RNA polymerases Lesion bypass DNA polymerase (Y-family), little finger domain 32
P-loop containing nucleoside triphosphate hydrolases Homeodomain-like 32
Class II aaRS and biotin synthetases C-terminal domain of ProRS 32
Fe-S cluster assembly (FSCA) domain-like Fe-S cluster assembly (FSCA) domain-like 31
PRTase-like PRTase-like 32
NagB/RpiA/CoA transferase-like D-ribose-5-phosphate isomerase (RpiA), lid domain 32
Cytochrome c Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor 31
R1 subunit of ribonucleotide reductase, N-terminal domain PFL-like glycyl radical enzymes 31
E set domains CBS-domain pair 31
POZ domain TPR-like 32
Nicotinate/Quinolinate PRTase N-terminal domain-like Nicotinate/Quinolinate PRTase C-terminal domain-like 32
Ubiquitin-like Cysteine proteinases 32
FF domain FF domain 33
Heme oxygenase-like HAD-like 32
SNARE fusion complex SNARE fusion complex 31
RING/U-box BRCT domain 32
Macro domain-like Zn-dependent exopeptidases 31
CRAL/TRIO N-terminal domain Supernatant protein factor (SPF), C-terminal domain 32
WW domain FF domain 33
Flavoproteins Riboflavin synthase domain-like 33
HAD-like BRCT domain 32
SMAD/FHA domain P-loop containing nucleoside triphosphate hydrolases 31
AN1-like Zinc finger AN1-like Zinc finger 33
WW domain P-loop containing nucleoside triphosphate hydrolases 32
ARM repeat POZ domain 32
Toll/Interleukin receptor TIR domain RNI-like 33
Nitrite/Sulfite reductase N-terminal domain-like Nitrite/Sulfite reductase N-terminal domain-like 32
CRAL/TRIO domain Supernatant protein factor (SPF), C-terminal domain 32
TPR-like RING/U-box 33
MIT domain P-loop containing nucleoside triphosphate hydrolases 31
EF-hand Mitochondrial carrier 32
ATP-dependent DNA ligase DNA-binding domain DNA ligase/mRNA capping enzyme, catalytic domain 33
F-box domain HCP-like 32
PDZ domain-like PDZ domain-like 32
PYP-like sensor domain (PAS domain) Homodimeric domain of signal transducing histidine kinase 32
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 32
Tudor/PWWP/MBT Tudor/PWWP/MBT 33
Cysteine proteinases UBA-like 32
SWIB/MDM2 domain SWIB/MDM2 domain 32
Nucleoside hydrolase Nucleoside hydrolase 33
Chaperone J-domain RNA-binding domain, RBD 32
BRCT domain WGR domain-like 32
Thioredoxin-like Cysteine-rich domain 33
Nucleotidylyl transferase Nucleotidylyl transferase 31
BAR/IMD domain-like ArfGap/RecO-like zinc finger 33
beta-N-acetylhexosaminidase-like domain (Trans)glycosidases 32
(Phosphotyrosine protein) phosphatases II DNA ligase/mRNA capping enzyme, catalytic domain 31
Eukaryotic type KH-domain (KH-domain type I) Nucleic acid-binding proteins 32
Ribosomal L27 protein-like Nucleic acid-binding proteins 32
BAR/IMD domain-like Ankyrin repeat 33
Glycoside hydrolase/deacetylase Galactose mutarotase-like 32
Glycoside hydrolase/deacetylase Families 57/38 glycoside transferase middle domain 32
P-loop containing nucleoside triphosphate hydrolases Class I glutamine amidotransferase-like 32
Metallo-hydrolase/oxidoreductase Metallo-hydrolase/oxidoreductase 33
BRCT domain ADP-ribosylation 32
P-loop containing nucleoside triphosphate hydrolases Retrovirus zinc finger-like domains 32
DNA-binding domain DNA-binding pseudobarrel domain 33
ATP-dependent DNA ligase DNA-binding domain Nucleic acid-binding proteins 33
PUA domain-like Nucleotidylyl transferase 32
Clathrin heavy-chain terminal domain ARM repeat 31
NAD(P)-binding Rossmann-fold domains Serine metabolism enzymes domain 32
WD40 repeat-like DNase I-like 32
Carbamate kinase-like ACT-like 32
Chromo domain-like S-adenosyl-L-methionine-dependent methyltransferases 31
RCC1/BLIP-II RCC1/BLIP-II 32
P-loop containing nucleoside triphosphate hydrolases PH domain-like 33
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 31
RING/U-box UBA-like 32
P-loop containing nucleoside triphosphate hydrolases Signal peptide-binding domain 32
Protein kinase-like (PK-like) KA1-like 31
BAR/IMD domain-like PH domain-like 33
Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 32
WD40 repeat-like DPP6 N-terminal domain-like 32
GST C-terminal domain-like eEF-1beta-like 32
"Winged helix" DNA-binding domain Sec63 N-terminal domain-like 32
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 32
Rap30/74 interaction domains "Winged helix" DNA-binding domain 32
P-loop containing nucleoside triphosphate hydrolases Hypothetical protein YjiA, C-terminal domain 33
tRNA-binding arm Class II aaRS and biotin synthetases 31
N-terminal, heterodimerisation domain of RBP7 (RpoE) Nucleic acid-binding proteins 31
Homeodomain-like RING/U-box 32
alpha-D-mannose-specific plant lectins Hairpin loop containing domain-like 32
ThrRS/AlaRS common domain Class II aaRS ABD-related 32
Creatinase/aminopeptidase "Winged helix" DNA-binding domain 32
PH domain-like WD40 repeat-like 32
Formate/glycerate dehydrogenase catalytic domain-like Formate/glycerate dehydrogenase catalytic domain-like 31
YrdC/RibB RibA-like 31
Serine metabolism enzymes domain ACT-like 32
Coiled-coil domain of nucleotide exchange factor GrpE Head domain of nucleotide exchange factor GrpE 31
"Winged helix" DNA-binding domain E set domains 32
Cytochrome c oxidase subunit II-like, transmembrane region Cupredoxins 33
P-loop containing nucleoside triphosphate hydrolases CYTH-like phosphatases 32
Mannose-binding lectins Mannose-binding lectins 32
Flavoproteins Ferredoxin reductase-like, C-terminal NADP-linked domain 33
Sec63 N-terminal domain-like Sec63 N-terminal domain-like 32
(Phosphotyrosine protein) phosphatases II E set domains 32
alpha/beta-Hydrolases alpha/beta-Hydrolases 32
BRCT domain Domain of poly(ADP-ribose) polymerase 32
UBC-like Endosomal sorting complex assembly domain 31
Nitrite and sulphite reductase 4Fe-4S domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 32
DNA repair protein MutS, domain I DNA repair protein MutS, domain III 33
Formate/glycerate dehydrogenase catalytic domain-like ACT-like 32
(Phosphotyrosine protein) phosphatases II Nucleic acid-binding proteins 31
PH domain-like BEACH domain 32
DUSP-like Cysteine proteinases 32
Nitrite/Sulfite reductase N-terminal domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 32
ARM repeat Subdomain of clathrin and coatomer appendage domain 33
(Trans)glycosidases (Trans)glycosidases 33
Ribonuclease H-like Chromo domain-like 33
PLP-dependent transferases Ornithine decarboxylase C-terminal domain 31
Class II aaRS ABD-related C-terminal domain of ProRS 32
EF-hand Calponin-homology domain, CH-domain 31
Aldolase Aminoacid dehydrogenase-like, N-terminal domain 31
PriA/YqbF domain GINS helical bundle-like 33
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 32
Hypothetical protein c14orf129, hspc210 TPR-like 32
PDZ domain-like ClpP/crotonase 31
NSFL1 (p97 ATPase) cofactor p47, SEP domain Ubiquitin-like 32
TGS-like Class II aaRS ABD-related 21
MurE/MurF N-terminal domain MurD-like peptide ligases, peptide-binding domain 22
Amidase signature (AS) enzymes TPR-like 21
Ribosomal protein L11, C-terminal domain PLP-dependent transferases 21
Elongation factor Ts (EF-Ts), dimerisation domain Elongation factor Ts (EF-Ts), dimerisation domain 22
ArfGap/RecO-like zinc finger C2 domain (Calcium/lipid-binding domain, CaLB) 22
Carbamate kinase-like Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 21
FAD/NAD(P)-binding domain Trimeric LpxA-like enzymes 22
Lysozyme-like Lysozyme-like 22
N-terminal nucleophile aminohydrolases (Ntn hydrolases) FMN-linked oxidoreductases 22
Ribosomal protein S3 C-terminal domain Cupredoxins 22
Zinc beta-ribbon Cyclin-like 21
Saposin Saposin 21
FGAM synthase PurL, linker domain Class I glutamine amidotransferase-like 22
ARID-like HSP20-like chaperones 21
Metallo-dependent hydrolases Glutamine synthetase/guanido kinase 21
PEP carboxykinase N-terminal domain PEP carboxykinase-like 21
Ribosomal protein L16p/L10e Cytochrome c oxidase subunit II-like, transmembrane region 22
Pectin lyase-like Pectin lyase-like 22
UBA-like P-loop containing nucleoside triphosphate hydrolases 22
Translation proteins Translation proteins 21
Ribosomal protein S5 domain 2-like Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 22
P-loop containing nucleoside triphosphate hydrolases vWA-like 22
UBC-like RING/U-box 22
Ribonuclease PH domain 2-like Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 22
POZ domain YVTN repeat-like/Quinoprotein amine dehydrogenase 21
FMN-linked oxidoreductases Alpha subunit of glutamate synthase, C-terminal domain 22
POZ domain POZ domain 22
PRP4-like Functional domain of the splicing factor Prp18 21
Galactose-binding domain-like NAD(P)-binding Rossmann-fold domains 21
Glutathione synthetase ATP-binding domain-like N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) 22
E set domains E set domains 22
Chaperone J-domain ARM repeat 22
Galactose-binding domain-like beta-Galactosidase/glucuronidase domain 22
Oxidoreductase molybdopterin-binding domain E set domains 22
N-terminal domain of adenylylcyclase associated protein, CAP C-terminal domain of adenylylcyclase associated protein 21
Acetyl-CoA synthetase-like ACP-like 22
Protein kinase-like (PK-like) PH domain-like 21
LysM domain Protein kinase-like (PK-like) 21
DPP6 N-terminal domain-like Tricorn protease N-terminal domain 22
PH domain-like Phospholipase D/nuclease 21
Restriction endonuclease-like RuvA domain 2-like 22
WD40 repeat-like SNARE fusion complex 22
4'-phosphopantetheinyl transferase 4'-phosphopantetheinyl transferase 22
PH domain-like ARM repeat 22
RING/U-box PUA domain-like 22
Dom34/Pelota N-terminal domain-like L30e-like 21
Ribosomal protein S5 domain 2-like DNA mismatch repair protein MutL 21
Elongation factor TFIIS domain 2 Zinc beta-ribbon 22
Rudiment single hybrid motif Cytochrome f subunit of the cytochrome b6f complex, transmembrane anchor 21
P-loop containing nucleoside triphosphate hydrolases Helical scaffold and wing domains of SecA 22
Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 Elongation factor TFIIS domain 2 22
F-box domain Clavaminate synthase-like 22
Pre-protein crosslinking domain of SecA Helical scaffold and wing domains of SecA 22
Alpha-L RNA-binding motif Pseudouridine synthase 22
HAD-like dsRNA-binding domain-like 22
FYVE/PHD zinc finger GroEL-intermediate domain like 21
t-snare proteins SNARE fusion complex 21
Probable bacterial effector-binding domain Probable bacterial effector-binding domain 22
Ribosomal protein L22 Prokaryotic type KH domain (KH-domain type II) 22
Ribosomal protein L16p/L10e Cupredoxins 22
Tetrahydrobiopterin biosynthesis enzymes-like Tetrahydrobiopterin biosynthesis enzymes-like 22
Aldolase 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 21
FGAM synthase PurL, linker domain PurM C-terminal domain-like 22
IlvD/EDD N-terminal domain-like LeuD/IlvD-like 21
FAD/NAD(P)-binding domain Thioredoxin-like 21
Nucleic acid-binding proteins "Winged helix" DNA-binding domain 21
Arp2/3 complex subunits Arp2/3 complex subunits 22
4Fe-4S ferredoxins P-loop containing nucleoside triphosphate hydrolases 21
Chaperone J-domain 4Fe-4S ferredoxins 21
Chaperone J-domain beta-beta-alpha zinc fingers 22
cAMP-binding domain-like Thioesterase/thiol ester dehydrase-isomerase 21
NAD(P)-binding Rossmann-fold domains Glutamyl tRNA-reductase dimerization domain 21
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase DNA mismatch repair protein MutL 21
P-loop containing nucleoside triphosphate hydrolases RecA protein, C-terminal domain 22
Rhomboid-like UBA-like 21
MurCD N-terminal domain MurD-like peptide ligases, peptide-binding domain 21
vWA-like SPOC domain-like 22
UDP-Glycosyltransferase/glycogen phosphorylase Ribosomal protein S5 domain 2-like 21
Aconitase iron-sulfur domain LeuD/IlvD-like 21
Nucleotide-diphospho-sugar transferases Nucleotide-diphospho-sugar transferases 21
HAND domain of the nucleosome remodeling ATPase ISWI Homeodomain-like 21
Tudor/PWWP/MBT SET domain 21
FAD/NAD(P)-binding domain Heme-dependent catalase-like 22
SAP domain FYVE/PHD zinc finger 22
ARM repeat UBA-like 22
S-adenosyl-L-methionine-dependent methyltransferases Putative methyltransferase TM0872, insert domain 22
P-loop containing nucleoside triphosphate hydrolases HAND domain of the nucleosome remodeling ATPase ISWI 21
Translation proteins ThrRS/AlaRS common domain 22
RuBisCO, large subunit, small (N-terminal) domain RuBisCo, C-terminal domain 21
Carbamate kinase-like Acyl-CoA N-acyltransferases (Nat) 21
FYVE/PHD zinc finger Clavaminate synthase-like 22
P-loop containing nucleoside triphosphate hydrolases Glucocorticoid receptor-like (DNA-binding domain) 21
Arabinanase/levansucrase/invertase Nucleotide-diphospho-sugar transferases 21
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Alpha subunit of glutamate synthase, C-terminal domain 22
HIT/MYND zinc finger-like SET domain 22
Surp module (SWAP domain) Surp module (SWAP domain) 21
FAD/NAD(P)-binding domain S-adenosyl-L-methionine-dependent methyltransferases 21
Activating enzymes of the ubiquitin-like proteins Activating enzymes of the ubiquitin-like proteins 21
PurM C-terminal domain-like PurM C-terminal domain-like 22
PurS-like FGAM synthase PurL, linker domain 22
PurM N-terminal domain-like Class I glutamine amidotransferase-like 22
Histone-fold ARM repeat 22
PLP-dependent transferases PLP-dependent transferases 22
Macro domain-like CRAL/TRIO domain 21
Cystatin/monellin Cystatin/monellin 22
Domain of the SRP/SRP receptor G-proteins Signal peptide-binding domain 21
Class II aaRS and biotin synthetases Translation proteins 22
Fumarylacetoacetate hydrolase, FAH, N-terminal domain FAH 22
Folate-binding domain Aminomethyltransferase beta-barrel domain 22
Eukaryotic type KH-domain (KH-domain type I) RING/U-box 21
DEK C-terminal domain SWIB/MDM2 domain 21
MurCD N-terminal domain MurD-like peptide ligases, catalytic domain 21
Toll/Interleukin receptor TIR domain Toll/Interleukin receptor TIR domain 22
Galactose oxidase, central domain P-loop containing nucleoside triphosphate hydrolases 21
Metalloproteases ("zincins"), catalytic domain ARM repeat 22
RNA-binding domain, RBD TPR-like 22
UBA-like PUG domain-like 22
ACT-like Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 21
TRAF domain-like TRAF domain-like 22
PX domain BAR/IMD domain-like 22
Cyclophilin-like TPR-like 21
Rudiment single hybrid motif Single hybrid motif 22
Endosomal sorting complex assembly domain VPS28 C-terminal domain-like 22
DNA repair protein MutS, domain I DNA repair protein MutS, domain II 22
Cysteine proteinases Cysteine proteinases 22
Glutathione synthetase ATP-binding domain-like Single hybrid motif 22
WWE domain ADP-ribosylation 22
SBT domain Ankyrin repeat 21
HAD-like NTF2-like 21
RNA-binding domain, RBD Ran binding protein zinc finger-like 22
CheY-like CheY-like 21
Chaperone J-domain Sec63 N-terminal domain-like 21
PA domain RING/U-box 22
(Phosphotyrosine protein) phosphatases II Actin depolymerizing proteins 22
DNase I-like DNase I-like 21
Thioredoxin-like "Winged helix" DNA-binding domain 21
PurM C-terminal domain-like Class I glutamine amidotransferase-like 22
P-loop containing nucleoside triphosphate hydrolases Protein kinase-like (PK-like) 22
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) Translation proteins 22
Surp module (SWAP domain) Ubiquitin-like 21
UBA-like Thioredoxin-like 22
Ribosomal L27 protein-like Eukaryotic type KH-domain (KH-domain type I) 21
Tudor/PWWP/MBT P-loop containing nucleoside triphosphate hydrolases 22
Aminopeptidase/glucanase lid domain Zn-dependent exopeptidases 21
P-loop containing nucleoside triphosphate hydrolases Prokaryotic type KH domain (KH-domain type II) 21
CAD & PB1 domains UBA-like 21
YjeF N-terminal domain-like FMN-binding split barrel 22
FYVE/PHD zinc finger Chromo domain-like 22
Calponin-homology domain, CH-domain EB1 dimerisation domain-like 22
CorA soluble domain-like Magnesium transport protein CorA, transmembrane region 21
UBA-like Elongation factor Ts (EF-Ts), dimerisation domain 22
Adenine nucleotide alpha hydrolases-like Molybdenum cofactor biosynthesis proteins 21
Transcription factor IIA (TFIIA), alpha-helical domain Transcription factor IIA (TFIIA), beta-barrel domain 22
Tropomyosin Tropomyosin 22
Cytidine deaminase-like Dihydrofolate reductase-like 22
Rudiment single hybrid motif N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) 22
PYP-like sensor domain (PAS domain) F-box domain 22
FAD/NAD(P)-binding domain ACP-like 22
Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 Zinc beta-ribbon 22
P-loop containing nucleoside triphosphate hydrolases TPR-like 22
Glutamyl tRNA-reductase catalytic, N-terminal domain Glutamyl tRNA-reductase dimerization domain 21
NAD(P)-binding Rossmann-fold domains Citrate synthase 21
C2 domain (Calcium/lipid-binding domain, CaLB) vWA-like 21
P-loop containing nucleoside triphosphate hydrolases RuvA domain 2-like 21
Translation initiation factor IF3, N-terminal domain Translation initiation factor IF3, C-terminal domain 22
(Trans)glycosidases Ricin B-like lectins 21
Heat shock protein 70kD (HSP70), C-terminal subdomain Heat shock protein 70kD (HSP70), C-terminal subdomain 21
Acid proteases Acid proteases 22
Mechanosensitive channel protein MscS (YggB), transmembrane region Sm-like ribonucleoproteins 21
BRCT domain FYVE/PHD zinc finger 22
FYVE/PHD zinc finger Transducin (alpha subunit), insertion domain 21
RNA-binding domain, RBD WW domain 21
RING/U-box Ran binding protein zinc finger-like 22
Carbamate kinase-like ALDH-like 21
Glutamyl tRNA-reductase catalytic, N-terminal domain NAD(P)-binding Rossmann-fold domains 21
Tudor/PWWP/MBT FYVE/PHD zinc finger 21
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) ThrRS/AlaRS common domain 22
Carbamate kinase-like Carbamate kinase-like 21
PYP-like sensor domain (PAS domain) Kelch motif 22
N-terminal nucleophile aminohydrolases (Ntn hydrolases) PRTase-like 22
Cytochrome f, large domain Cytochrome f subunit of the cytochrome b6f complex, transmembrane anchor 21
Nucleotidyltransferase TGS-like 21
beta-Galactosidase/glucuronidase domain (Trans)glycosidases 22
Cytochrome f, large domain Rudiment single hybrid motif 21
ACT-like Formyltransferase 21
PurS-like PurM N-terminal domain-like 22
Staphylococcal nuclease Staphylococcal nuclease 21
PurS-like PurM C-terminal domain-like 22
beta and beta-prime subunits of DNA dependent RNA-polymerase beta and beta-prime subunits of DNA dependent RNA-polymerase 21
Chaperone J-domain Thioredoxin-like 22
FMN-linked oxidoreductases FYVE/PHD zinc finger 22
Leukotriene A4 hydrolase N-terminal domain ARM repeat 22
Cysteine-rich domain NAD kinase/diacylglycerol kinase-like 21
TGS-like ThrRS/AlaRS common domain 21
UDP-Glycosyltransferase/glycogen phosphorylase GHMP Kinase, C-terminal domain 21
UROD/MetE-like UROD/MetE-like 22
PreATP-grasp domain Single hybrid motif 22
Metallo-dependent hydrolases Glutamine synthetase, N-terminal domain 21
CAD & PB1 domains RING/U-box 21
Staphylococcal nuclease Tudor/PWWP/MBT 21
beta-Galactosidase/glucuronidase domain beta-Galactosidase/glucuronidase domain 22
ARID-like FYVE/PHD zinc finger 22
P-loop containing nucleoside triphosphate hydrolases Bromodomain 22
UBA-like NSFL1 (p97 ATPase) cofactor p47, SEP domain 21
PurS-like Class I glutamine amidotransferase-like 22
L30e-like alpha/beta knot 21
P-loop containing nucleoside triphosphate hydrolases F-box domain 22
Ribonuclease H-like Eukaryotic type KH-domain (KH-domain type I) 21
Thioredoxin-like eEF1-gamma domain 21
P-loop containing nucleoside triphosphate hydrolases Eukaryotic type KH-domain (KH-domain type I) 21
Ribosomal protein S5 domain 2-like Type II DNA topoisomerase 22
PH domain-like GTPase activation domain, GAP 21
PurM N-terminal domain-like PurM N-terminal domain-like 22
Protein kinase-like (PK-like) Acyl-CoA dehydrogenase NM domain-like 21
Carbamate kinase-like NAD(P)-binding Rossmann-fold domains 21
ACP-like Heme-dependent catalase-like 22
Trimeric LpxA-like enzymes Trimeric LpxA-like enzymes 22
P-loop containing nucleoside triphosphate hydrolases Pre-protein crosslinking domain of SecA 22
Histone-fold Histone-fold 21
Nucleotidylyl transferase Ribosomal protein L25-like 22
Plant lectins/antimicrobial peptides Barwin-like endoglucanases 21
Glutathione synthetase ATP-binding domain-like Phosphoglycerate mutase-like 22
Dimeric alpha+beta barrel Dimeric alpha+beta barrel 21
Rad51 N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 21
SET domain TPR-like 22
MurE/MurF N-terminal domain MurD-like peptide ligases, catalytic domain 22
Protein kinase-like (PK-like) Acyl-CoA dehydrogenase C-terminal domain-like 21
UBA-like Hect, E3 ligase catalytic domain 22
alpha-ketoacid dehydrogenase kinase, N-terminal domain ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 21
Growth factor receptor domain Protein kinase-like (PK-like) 21
Nucleic acid-binding proteins Ribosomal protein S7 21
Class II aaRS and biotin synthetases Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) 22
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Adenine nucleotide alpha hydrolases-like 22
HAD-like Riboflavin kinase-like 21
GST C-terminal domain-like eEF1-gamma domain 21
TAZ domain TAZ domain 21
ACP-like Trimeric LpxA-like enzymes 22
Actin-crosslinking proteins (Trans)glycosidases 21
TGS-like Class II aaRS and biotin synthetases 21
"Winged helix" DNA-binding domain Periplasmic binding protein-like II 22
Chaperone J-domain E set domains 21
GroEL-intermediate domain like SAICAR synthase-like 21
GroEL-intermediate domain like GroEL-intermediate domain like 21
NAD(P)-binding Rossmann-fold domains Succinyl-CoA synthetase domains 21
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Type II DNA topoisomerase 22
Trimeric LpxA-like enzymes Heme-dependent catalase-like 22
Ankyrin repeat Ankyrin repeat 21
Rhodanese/Cell cycle control phosphatase Rhodanese/Cell cycle control phosphatase 22
Dom34/Pelota N-terminal domain-like Translational machinery components 21
FGAM synthase PurL, linker domain PurM N-terminal domain-like 22
HD-domain/PDEase-like TGS-like 21
vWA-like EF-hand 11
L-aspartase-like Class II aaRS ABD-related 11
FAD/NAD(P)-binding domain 4Fe-4S ferredoxins 11
ARM repeat Nucleic acid-binding proteins 11
FMN-linked oxidoreductases alpha-helical ferredoxin 11
PDZ domain-like (Phosphotyrosine protein) phosphatases II 11
F-box domain LysM domain 11
UBC-like alpha/beta-Hydrolases 11
AN1-like Zinc finger beta-beta-alpha zinc fingers 11
6-phosphogluconate dehydrogenase C-terminal domain-like YgbK-like 11
P-loop containing nucleoside triphosphate hydrolases Epsilon subunit of F1F0-ATP synthase N-terminal domain 11
Mitochondrial carrier (Trans)glycosidases 11
Nucleic acid-binding proteins eIF-2-alpha, C-terminal domain 11
Phosphoglycerate mutase-like Phosphoglycerate mutase-like 11
BSD domain-like BSD domain-like 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Ran binding protein zinc finger-like P-loop containing nucleoside triphosphate hydrolases 11
Ribonuclease PH domain 2-like Nucleic acid-binding proteins 11
PH domain-like HMG-box 11
RNI-like Outer arm dynein light chain 1 11
"Winged helix" DNA-binding domain HRDC-like 11
ARM repeat "Winged helix" DNA-binding domain 11
E set domains Ferredoxin reductase-like, C-terminal NADP-linked domain 11
MoeA N-terminal region -like MoeA C-terminal domain-like 11
Aspartate/glutamate racemase Aspartate/glutamate racemase 11
WD40 repeat-like NHL repeat 11
HydB/Nqo4-like Photosystem I subunits PsaA/PsaB 11
Ribosomal protein S2 Nucleotide-diphospho-sugar transferases 11
P-loop containing nucleoside triphosphate hydrolases DNA/RNA polymerases 11
(Phosphotyrosine protein) phosphatases II (Phosphotyrosine protein) phosphatases II 11
FAD/NAD(P)-binding domain Nucleotide-binding domain 11
Rhomboid-like Ran binding protein zinc finger-like 11
DHS-like NAD/FAD-binding domain Enolase C-terminal domain-like 11
Macro domain-like HIT-like 11
Glycerol-3-phosphate (1)-acyltransferase EF-hand 11
Class II aaRS and biotin synthetases GAD domain-like 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
HMA, heavy metal-associated domain Metal cation-transporting ATPase, ATP-binding domain N 11
Ferritin-like AbrB/MazE/MraZ-like 11
Putative DNA-binding domain Class II aaRS and biotin synthetases 11
XRCC4, N-terminal domain XRCC4, C-terminal oligomerization domain 11
Urease, gamma-subunit Metallo-dependent hydrolases 11
BRCA2 helical domain Nucleic acid-binding proteins 11
POZ domain Soluble quinoprotein glucose dehydrogenase 11
Ribosomal protein L36 Translational machinery components 11
PH domain-like (Phosphotyrosine protein) phosphatases II 11
Cna protein B-type domain Cna protein B-type domain 11
Glutathione synthetase ATP-binding domain-like alpha/beta-Hydrolases 11
Thioesterase/thiol ester dehydrase-isomerase PurM N-terminal domain-like 11
E set domains RNA-binding domain, RBD 11
Bactericidal permeability-increasing protein, BPI Bactericidal permeability-increasing protein, BPI 11
Radical SAM enzymes Acyl-CoA N-acyltransferases (Nat) 11
Oxygen-evolving enhancer protein 3, Cyclophilin-like 11
Di-copper centre-containing domain Di-copper centre-containing domain 11
Thiamin diphosphate-binding fold (THDP-binding) Enolase N-terminal domain-like 11
Transducin (alpha subunit), insertion domain F-box domain 11
L9 N-domain-like Ribonuclease H-like 11
WD40 repeat-like Bromodomain 11
Clavaminate synthase-like Protein kinase-like (PK-like) 11
PDZ domain-like E set domains 11
FMN-dependent nitroreductase-like FMN-dependent nitroreductase-like 11
Nucleotide-diphospho-sugar transferases ARM repeat 11
Retrovirus zinc finger-like domains RING/U-box 11
FKBP-like S-adenosyl-L-methionine-dependent methyltransferases 11
ARM repeat alpha/beta-Hydrolases 11
Ribonuclease H-like RING/U-box 11
TPR-like SMR domain-like 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Nucleic acid-binding proteins 11
TolA/TonB C-terminal domain NAD(P)-binding Rossmann-fold domains 11
Ferritin-like MurE/MurF N-terminal domain 11
FYSH domain Hypothetical protein AF0491, middle domain 11
AbrB/MazE/MraZ-like Penicillin binding protein dimerisation domain 11
Glucocorticoid receptor-like (DNA-binding domain) BRCT domain 11
PGBD-like DnaJ/Hsp40 cysteine-rich domain 11
Nucleic acid-binding proteins eIF2alpha middle domain-like 11
"Winged helix" DNA-binding domain Zinc beta-ribbon 11
Nucleotidylyl transferase tRNA-binding arm 11
Nucleotide-binding domain Heme-dependent catalase-like 11
SNARE-like Domain of the SRP/SRP receptor G-proteins 11
RNA-binding domain, RBD Clavaminate synthase-like 11
Ubiquitin-like Acid proteases 11
F-box domain UDP-Glycosyltransferase/glycogen phosphorylase 11
Ferritin-like beta-lactamase/transpeptidase-like 11
DNase I-like EF-hand 11
BRCT domain P-loop containing nucleoside triphosphate hydrolases 11
2Fe-2S ferredoxin-like 4Fe-4S ferredoxins 11
Hypothetical protein At3g22680 Hypothetical protein At3g22680 11
P-loop containing nucleoside triphosphate hydrolases Tropomyosin 11
Eukaryotic type KH-domain (KH-domain type I) LigT-like 11
Ran binding protein zinc finger-like Translation proteins 11
Cytochrome b5-like heme/steroid binding domain Ferredoxin reductase-like, C-terminal NADP-linked domain 11
TPR-like Cysteine proteinases 11
AbrB/MazE/MraZ-like beta-lactamase/transpeptidase-like 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases Nucleic acid-binding proteins 11
Protein kinase-like (PK-like) FAD-binding/transporter-associated domain-like 11
TPR-like PUA domain-like 11
Clavaminate synthase-like beta-beta-alpha zinc fingers 11
PIN domain-like Nucleic acid-binding proteins 11
FKBP-like Triger factor/SurA peptide-binding domain-like 11
lambda repressor-like DNA-binding domains Cyanase C-terminal domain 11
Ferritin-like Putative methyltransferase TM0872, insert domain 11
Thioredoxin-like Ribonuclease H-like 11
Oxidoreductase molybdopterin-binding domain Ferredoxin reductase-like, C-terminal NADP-linked domain 11
SMI1/KNR4-like ApaG-like 11
FYSH domain beta-beta-alpha zinc fingers 11
Homeodomain-like ARM repeat 11
Hypothetical protein AF0491, middle domain beta-beta-alpha zinc fingers 11
Fucose-specific lectin Fucose-specific lectin 11
FAD-linked reductases, C-terminal domain 4Fe-4S ferredoxins 11
C2 domain (Calcium/lipid-binding domain, CaLB) Formin homology 2 domain (FH2 domain) 11
SufE/NifU BolA-like 11
Nucleotide-binding domain ACP-like 11
Chaperone J-domain CSL zinc finger 11
Concanavalin A-like lectins/glucanases P-loop containing nucleoside triphosphate hydrolases 11
C-type lectin-like Protein kinase-like (PK-like) 11
Ran binding protein zinc finger-like DNase I-like 11
NAD(P)-binding Rossmann-fold domains YgbK-like 11
Glutathione synthetase ATP-binding domain-like Phosphohistidine domain 11
Tricorn protease domain 2 Cyclophilin-like 11
Retrovirus zinc finger-like domains Plus3-like 11
"Winged helix" DNA-binding domain RNI-like 11
Adenine nucleotide alpha hydrolases-like YjgF-like 11
Starch-binding domain-like Phosphoglycerate mutase-like 11
Clavaminate synthase-like P-loop containing nucleoside triphosphate hydrolases 11
L domain-like FabD/lysophospholipase-like 11
"Winged helix" DNA-binding domain RmlC-like cupins 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Nucleotide-binding domain 11
P-loop containing nucleoside triphosphate hydrolases PLP-dependent transferases 11
GAF domain-like Class I glutamine amidotransferase-like 11
NAD(P)-binding Rossmann-fold domains 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
Acetyl-CoA synthetase-like Quinoprotein alcohol dehydrogenase-like 11
Galactose oxidase, central domain Myosin rod fragments 11
Actin-like ATPase domain AF1104-like 11
Quinoprotein alcohol dehydrogenase-like Protein kinase-like (PK-like) 11
Acyl-CoA N-acyltransferases (Nat) BRCT domain 11
DNA polymerase beta, N-terminal domain-like Nucleotidyltransferase 11
MoeA N-terminal region -like Molybdenum cofactor biosynthesis proteins 11
Acyl-CoA binding protein Kelch motif 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Nucleotidylyl transferase 11
ARM repeat FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) 11
PUA domain-like S-adenosyl-L-methionine-dependent methyltransferases 11
F-box domain TPR-like 11
beta and beta-prime subunits of DNA dependent RNA-polymerase Ribosomal protein S7 11
S-adenosyl-L-methionine-dependent methyltransferases beta-lactamase/transpeptidase-like 11
Metallo-hydrolase/oxidoreductase Nucleic acid-binding proteins 11
BRCT domain PsbU/PolX domain-like 11
Trimeric LpxA-like enzymes ARM repeat 11
P-loop containing nucleoside triphosphate hydrolases GIY-YIG endonuclease 11
beta-Galactosidase/glucuronidase domain Galactose mutarotase-like 11
S13-like H2TH domain Ribosomal protein S5 domain 2-like 11
Kelch motif alpha-D-mannose-specific plant lectins 11
Transmembrane di-heme cytochromes HydB/Nqo4-like 11
Clavaminate synthase-like RING/U-box 11
Voltage-gated potassium channels NAD(P)-binding Rossmann-fold domains 11
Trigger factor ribosome-binding domain FKBP-like 11
E set domains Cytochrome b5-like heme/steroid binding domain 11
CBS-domain pair NAD kinase/diacylglycerol kinase-like 11
DNA polymerase beta, N-terminal domain-like PsbU/PolX domain-like 11
Homeodomain-like F-box domain 11
NAD(P)-linked oxidoreductase NAD(P)-linked oxidoreductase 11
Tex N-terminal region-like SH2 domain 11
Quinoprotein alcohol dehydrogenase-like SNARE fusion complex 11
Concanavalin A-like lectins/glucanases Calpain large subunit, middle domain (domain III) 11
AraD/HMP-PK domain-like HAD-like 11
Protein kinase-like (PK-like) NTF2-like 11
F-box domain NAD(P)-binding Rossmann-fold domains 11
Putative methyltransferase TM0872, insert domain Penicillin binding protein dimerisation domain 11
PLP-dependent transferases MOSC N-terminal domain-like 11
Toll/Interleukin receptor TIR domain RmlC-like cupins 11
vWA-like C-terminal domain of Ku80 11
beta-beta-alpha zinc fingers CCCH zinc finger 11
Nucleic acid-binding proteins SH2 domain 11
Protein kinase-like (PK-like) beta-lactamase/transpeptidase-like 11
N-terminal domain of the delta subunit of the F1F0-ATP synthase P-loop containing nucleoside triphosphate hydrolases 11
Starch-binding domain-like P-loop containing nucleoside triphosphate hydrolases 11
Tricorn protease domain 2 alpha/beta-Hydrolases 11
FMN-linked oxidoreductases Nucleotide-binding domain 11
Urease, gamma-subunit Urease, beta-subunit 11
Flavoproteins Radical SAM enzymes 11
L domain-like RmlC-like cupins 11
P-loop containing nucleoside triphosphate hydrolases HRDC-like 11
Rudiment single hybrid motif ClpP/crotonase 11
FAD/NAD(P)-binding domain SMAD/FHA domain 11
LysM domain LysM domain 11
R3H domain Ankyrin repeat 11
Ankyrin repeat S-adenosyl-L-methionine-dependent methyltransferases 11
SAP domain RNA-binding domain, RBD 11
WD40 repeat-like C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase 11
Homeodomain-like N-terminal nucleophile aminohydrolases (Ntn hydrolases) 11
PreATP-grasp domain Carbamoyl phosphate synthetase, large subunit connection domain 11
TATA-box binding protein-like TATA-box binding protein-like 11
CAD & PB1 domains CAD & PB1 domains 11
Riboflavin synthase domain-like Riboflavin synthase domain-like 11
Nucleotidylyl transferase Alpha-L RNA-binding motif 11
RNI-like Glutathione synthetase ATP-binding domain-like 11
Cytochrome b5-like heme/steroid binding domain Riboflavin synthase domain-like 11
Tubulin nucleotide-binding domain-like Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 11
Protein prenylyltransferase L domain-like 11
Nqo1 middle domain-like Nqo1C-terminal domain-like 11
6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK Dihydropteroate synthetase-like 11
vWA-like Cysteine-rich domain 11
cAMP-binding domain-like cAMP-binding domain-like 11
D-aminoacid aminotransferase-like PLP-dependent enzymes D-aminoacid aminotransferase-like PLP-dependent enzymes 11
WD40 repeat-like Tricorn protease domain 2 11
POZ domain WD40 repeat-like 11
NusB-like S-adenosyl-L-methionine-dependent methyltransferases 11
SMAD/FHA domain PP2C-like 11
PRTase-like Ribulose-phoshate binding barrel 11
Nucleoplasmin-like core domain FKBP-like 11
Urease, beta-subunit Composite domain of metallo-dependent hydrolases 11
BRCT domain Nucleotidyltransferase 11
Putative isomerase YbhE DNase I-like 11
P-loop containing nucleoside triphosphate hydrolases HIT-like 11
Ankyrin repeat RCC1/BLIP-II 11
S-adenosyl-L-methionine-dependent methyltransferases MurE/MurF N-terminal domain 11
Second domain of FERM Prismane protein-like 11
Acid proteases UBA-like 11
NAC domain "Helical backbone" metal receptor 11
L9 N-domain-like Ribosomal protein L9 C-domain 11
C-terminal, gelsolin-like domain of Sec23/24 VHP, Villin headpiece domain 11
Glucocorticoid receptor-like (DNA-binding domain) ADP-ribosylation 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases tRNA-binding arm 11
GYF domain CCCH zinc finger 11
DNA-glycosylase Nudix 11
Lipocalins Lipocalins 11
HMG-box TRAF domain-like 11
DNA repair protein MutS, domain I GIY-YIG endonuclease 11
Nucleotide-binding domain Trimeric LpxA-like enzymes 11
BRCT domain Lesion bypass DNA polymerase (Y-family), little finger domain 11
P-loop containing nucleoside triphosphate hydrolases SMR domain-like 11
Nucleotidyltransferase EF-hand 11
RuvA domain 2-like Nucleic acid-binding proteins 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
Cytochrome P450 Protein kinase-like (PK-like) 11
AbrB/MazE/MraZ-like S-adenosyl-L-methionine-dependent methyltransferases 11
Concanavalin A-like lectins/glucanases Cysteine proteinases 11
Nucleic acid-binding proteins UBA-like 11
PRC-barrel domain Nucleotide-diphospho-sugar transferases 11
Tropomyosin Apolipoprotein 11
P-loop containing nucleoside triphosphate hydrolases Phosphoglycerate mutase-like 11
YgbK-like Aldolase 11
Metallo-hydrolase/oxidoreductase DNA ligase/mRNA capping enzyme, catalytic domain 11
DNA clamp DNA clamp 11
L domain-like Aldolase 11
(Trans)glycosidases Protein kinase-like (PK-like) 11
Zinc beta-ribbon Zinc beta-ribbon 11
MHC antigen-recognition domain ARM repeat 11
Ribonuclease H-like SH2 domain 11
Surp module (SWAP domain) ENTH/VHS domain 11
cAMP-binding domain-like Protein kinase-like (PK-like) 11
ATP synthase (F1-ATPase), gamma subunit N-terminal domain of alpha and beta subunits of F1 ATP synthase 11
Acetyl-CoA synthetase-like RNA-binding domain, RBD 11
Ubiquitin-like P-loop containing nucleoside triphosphate hydrolases 11
ARID-like Clavaminate synthase-like 11
Sec63 N-terminal domain-like DNA/RNA polymerases 11
FabD/lysophospholipase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 11
PUA domain-like eIF1-like 11
Tex N-terminal region-like Nucleic acid-binding proteins 11
PheT/TilS domain Class II aaRS and biotin synthetases 11
Class II aaRS and biotin synthetases HD-domain/PDEase-like 11
GST C-terminal domain-like Ribosomal protein L25-like 11
Acetyl-CoA synthetase-like Trimeric LpxA-like enzymes 11
Ubiquitin-like TPR-like 11
GlnB-like Thiolase-like 11
Nucleotidylyl transferase An anticodon-binding domain of class I aminoacyl-tRNA synthetases 11
FAD/NAD(P)-binding domain Acetyl-CoA synthetase-like 11
ISP domain Chlorophyll a-b binding protein 11
Ankyrin repeat Acetyl-CoA synthetase-like 11
ARM repeat BEACH domain 11
FYVE/PHD zinc finger ARM repeat 11
Oxidoreductase molybdopterin-binding domain Cytochrome b5-like heme/steroid binding domain 11
PH domain-like C2 domain (Calcium/lipid-binding domain, CaLB) 11
Multidrug resistance efflux transporter EmrE beta-beta-alpha zinc fingers 11
Sec1/munc18-like (SM) proteins Sec1/munc18-like (SM) proteins 11
Zn-dependent exopeptidases Transferrin receptor-like dimerisation domain 11
"Winged helix" DNA-binding domain GntR ligand-binding domain-like 11
RNI-like Thiolase-like 11
PreATP-grasp domain PreATP-grasp domain 11
Metalloproteases ("zincins"), catalytic domain HAD-like 11
Clavaminate synthase-like DNA repair protein MutS, domain I 11
BSD domain-like Formin homology 2 domain (FH2 domain) 11
DNA-glycosylase DNA-glycosylase 11
Translation proteins Nucleotide-diphospho-sugar transferases 11
Glutathione synthetase ATP-binding domain-like ClpP/crotonase 11
Glucocorticoid receptor-like (DNA-binding domain) Domain of poly(ADP-ribose) polymerase 11
P-loop containing nucleoside triphosphate hydrolases beta and beta-prime subunits of DNA dependent RNA-polymerase 11
Pseudouridine synthase PUA domain-like 11
Ferritin-like S-adenosyl-L-methionine-dependent methyltransferases 11
TPR-like HSP20-like chaperones 11
Transducin (alpha subunit), insertion domain RNI-like 11
Subtilisin-like Subtilisin-like 11
SSo0622-like Kelch motif 11
Quinoprotein alcohol dehydrogenase-like L domain-like 11
Acetyl-CoA synthetase-like Heme-dependent catalase-like 11
Six-hairpin glycosidases AbfB domain 11
Activator of Hsp90 ATPase, Aha1 Bet v1-like 11
P-loop containing nucleoside triphosphate hydrolases Obg GTP-binding protein C-terminal domain 11
SufE/NifU NadA-like 11
SMAD/FHA domain Phospholipase D/nuclease 11
Tex N-terminal region-like RuvA domain 2-like 11
Penicillin binding protein dimerisation domain beta-lactamase/transpeptidase-like 11
RNA-binding domain, RBD ENTH/VHS domain 11
Concanavalin A-like lectins/glucanases WD40 repeat-like 11
P-loop containing nucleoside triphosphate hydrolases Prismane protein-like 11
Ribosomal proteins S24e, L23 and L15e Translation proteins SH3-like domain 11
SAP domain Domain of poly(ADP-ribose) polymerase 11
Formate/glycerate dehydrogenase catalytic domain-like Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 11
HD-domain/PDEase-like EF-hand 11
FYVE/PHD zinc finger PUA domain-like 11
"Winged helix" DNA-binding domain Protein kinase-like (PK-like) 11
HydB/Nqo4-like Photosystem II antenna protein-like 11
PA domain Zn-dependent exopeptidases 11
Quinoprotein alcohol dehydrogenase-like C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) alpha-helical ferredoxin 11
F-box domain SMI1/KNR4-like 11
ParB/Sulfiredoxin KorB DNA-binding domain-like 11
beta-beta-alpha zinc fingers S-adenosyl-L-methionine-dependent methyltransferases 11
Ubiquitin-like HAD-like 11
GST C-terminal domain-like Nucleic acid-binding proteins 11
E set domains Riboflavin synthase domain-like 11
Chaperone J-domain HSC20 (HSCB), C-terminal oligomerisation domain 11
L domain-like TRAF domain-like 11
SPOC domain-like SAP domain 11
Glutamine synthetase/guanido kinase GatB/YqeY motif 11
Nucleic acid-binding proteins Multidrug resistance efflux transporter EmrE 11
Subtilisin-like Galactose-binding domain-like 11
Concanavalin A-like lectins/glucanases SH2 domain 11
F-box domain HIT/MYND zinc finger-like 11
Dihydrofolate reductase-like Thymidylate synthase/dCMP hydroxymethylase 11
PDZ domain-like TPR-like 11
Thioredoxin-like FAD-dependent thiol oxidase 11
TPR-like alpha/beta-Hydrolases 11
SAM/Pointed domain Metallo-hydrolase/oxidoreductase 11
Concanavalin A-like lectins/glucanases PH domain-like 11
HLH, helix-loop-helix DNA-binding domain Ribosomal protein L30p/L7e 11
TATA-box binding protein-like DNA-glycosylase 11
PUA domain-like alpha/beta knot 11
WD40 repeat-like Cyclophilin-like 11
RNA-binding domain, RBD DPP6 N-terminal domain-like 11
PreATP-grasp domain N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) 11
Putative DNA-binding domain Putative DNA-binding domain 11
Chelatase Chelatase 11
Translation proteins PRC-barrel domain 11
F-box domain Pectin lyase-like 11
SWIB/MDM2 domain eIF1-like 11
EF-hand TPR-like 11
dsRNA-binding domain-like FKBP-like 11
alpha/beta-Hydrolases Heme-dependent peroxidases 11
Eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment DNA breaking-rejoining enzymes 11
N-terminal domain of the delta subunit of the F1F0-ATP synthase N-terminal domain of alpha and beta subunits of F1 ATP synthase 11
Nucleic acid-binding proteins Elongation factor Ts (EF-Ts), dimerisation domain 11
Trypsin-like serine proteases AF2212/PG0164-like 11
Tudor/PWWP/MBT DNA repair protein MutS, domain II 11
TPR-like RNI-like 11
CarD-like P-loop containing nucleoside triphosphate hydrolases 11
Periplasmic binding protein-like II GlnB-like 11
Alpha subunit of glutamate synthase, C-terminal domain alpha-helical ferredoxin 11
WD40 repeat-like TPR-like 11
DNA topoisomerase IV, alpha subunit HMA, heavy metal-associated domain 11
beta-sandwich domain of Sec23/24 Protein kinase-like (PK-like) 11
6-phosphogluconate dehydrogenase C-terminal domain-like Aldolase 11
S15/NS1 RNA-binding domain Class II aaRS and biotin synthetases 11
LEA14-like LEA14-like 11
L domain-like WD40 repeat-like 11
SMAD/FHA domain BRCT domain 11
DEK C-terminal domain ssDNA-binding transcriptional regulator domain 11
Quinoprotein alcohol dehydrogenase-like Quinoprotein alcohol dehydrogenase-like 11
Cysteine proteinases Calpain large subunit, middle domain (domain III) 11
RuvA domain 2-like SH2 domain 11
Glutathione synthetase ATP-binding domain-like Carbamoyl phosphate synthetase, large subunit connection domain 11
R3H domain P-loop containing nucleoside triphosphate hydrolases 11
RNA-binding domain, RBD S-adenosyl-L-methionine-dependent methyltransferases 11
FAD/NAD(P)-binding domain Protein kinase-like (PK-like) 11
RNI-like WD40 repeat-like 11
SAP domain ADP-ribosylation 11
Starch-binding domain-like (Trans)glycosidases 11
Actin-like ATPase domain HD-domain/PDEase-like 11
Trigger factor ribosome-binding domain Triger factor/SurA peptide-binding domain-like 11
S15/NS1 RNA-binding domain Class II aaRS ABD-related 11
F-box domain Actin-like ATPase domain 11
Molybdenum cofactor biosynthesis proteins MoeA C-terminal domain-like 11
Glutathione synthetase ATP-binding domain-like Phosphoenolpyruvate/pyruvate domain 11
Chitinase insertion domain Protein kinase-like (PK-like) 11
TPR-like FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) 11
HMG-box HMG-box 11
EF-hand Sm-like ribonucleoproteins 11
Urease, gamma-subunit Composite domain of metallo-dependent hydrolases 11
beta-sandwich domain of Sec23/24 EF-hand 11
P-loop containing nucleoside triphosphate hydrolases RmlC-like cupins 11
4Fe-4S ferredoxins Formate dehydrogenase/DMSO reductase, domains 1-3 11
HAD-like NHL repeat 11
P-loop containing nucleoside triphosphate hydrolases CCCH zinc finger 11
Methylglyoxal synthase-like Cytidine deaminase-like 11
HMA, heavy metal-associated domain GroES-like 11
Photosystem II antenna protein-like Nqo5-like 11
Methyl-accepting chemotaxis protein (MCP) signaling domain TPR-like 11
P-loop containing nucleoside triphosphate hydrolases TRCF domain-like 11
Barwin-like endoglucanases Barwin-like endoglucanases 11
HMA, heavy metal-associated domain NAD(P)-binding Rossmann-fold domains 11
BRCT domain DNA/RNA polymerases 11
Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases 11
Ribonuclease H-like Nucleic acid-binding proteins 11
E2F-DP heterodimerization region E2F-DP heterodimerization region 11
RNA-binding domain, RBD PWI domain 11
C2 domain (Calcium/lipid-binding domain, CaLB) GroEL equatorial domain-like 11
Nucleic acid-binding proteins RuBisCo, C-terminal domain 11
Adenine nucleotide alpha hydrolases-like Argininosuccinate synthetase, C-terminal domain 11
Phosphoglycerate kinase S-adenosyl-L-methionine-dependent methyltransferases 11
Ribonuclease PH domain 2-like Ribonuclease PH domain 2-like 11
F-box domain NTF2-like 11
N-terminal domain of alpha and beta subunits of F1 ATP synthase Epsilon subunit of F1F0-ATP synthase N-terminal domain 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) CI-2 family of serine protease inhibitors 11
POZ domain RNI-like 11
Tudor/PWWP/MBT Hypothetical protein YjiA, C-terminal domain 11
Periplasmic binding protein-like II Regulatory protein AraC 11
Cation efflux protein cytoplasmic domain-like Cation efflux protein cytoplasmic domain-like 11
Class I glutamine amidotransferase-like Ribulose-phoshate binding barrel 11
ACP-like Quinoprotein alcohol dehydrogenase-like 11
Ubiquitin-like Bromodomain 11
vWA-like SAP domain 11
Concanavalin A-like lectins/glucanases RING/U-box 11
Pseudouridine synthase Pseudouridine synthase 11
Glutathione synthetase ATP-binding domain-like Methylglyoxal synthase-like 11
Starch-binding domain-like Starch-binding domain-like 11
UBA-like post-AAA+ oligomerization domain-like 11
Second domain of FERM P-loop containing nucleoside triphosphate hydrolases 11
Penicillin binding protein dimerisation domain MurE/MurF N-terminal domain 11
PreATP-grasp domain ClpP/crotonase 11
SSo0622-like S-adenosyl-L-methionine-dependent methyltransferases 11
Ribonuclease H-like RuvA domain 2-like 11
beta-beta-alpha zinc fingers Hermes dimerisation domain 11
PP2C-like cAMP-binding domain-like 11
Putative methyltransferase TM0872, insert domain MurE/MurF N-terminal domain 11
FYVE/PHD zinc finger TPR-like 11
Ribosomal L27 protein-like Obg GTP-binding protein N-terminal domain 11
WW domain ENTH/VHS domain 11
PreATP-grasp domain Methylglyoxal synthase-like 11
UBC-like UBA-like 11
C2 domain (Calcium/lipid-binding domain, CaLB) Protein kinase-like (PK-like) 11
Rhodanese/Cell cycle control phosphatase alpha/beta-Hydrolases 11
Nqo1 FMN-binding domain-like Nqo1 middle domain-like 11
Ribosomal protein S5 domain 2-like Nucleic acid-binding proteins 11
Class I glutamine amidotransferase-like ADC synthase 11
alpha-helical ferredoxin Nucleotide-binding domain 11
Thioredoxin-like NHL repeat 11
Invasin/intimin cell-adhesion fragments Invasin/intimin cell-adhesion fragments 11
DNA repair protein MutS, domain III SMR domain-like 11
Insert subdomain of RNA polymerase alpha subunit C-terminal domain of RNA polymerase alpha subunit 11
Carbon-nitrogen hydrolase Adenine nucleotide alpha hydrolases-like 11
Cytochrome b559 subunits Cytochrome b559 subunits 11
(Phosphotyrosine protein) phosphatases II Formin homology 2 domain (FH2 domain) 11
Dihydrofolate reductase-like YbiA-like 11
RING/U-box alpha/beta-Hydrolases 11
Dcp2 domain-like Nudix 11
DPP6 N-terminal domain-like DPP6 N-terminal domain-like 11
2Fe-2S ferredoxin-like Formate dehydrogenase/DMSO reductase, domains 1-3 11
POZ domain DPP6 N-terminal domain-like 11
GST C-terminal domain-like Nucleotidylyl transferase 11
L domain-like Outer arm dynein light chain 1 11
Ubiquitin-like F-box domain 11
Carbamoyl phosphate synthetase, small subunit N-terminal domain Class I glutamine amidotransferase-like 11
Concanavalin A-like lectins/glucanases BEACH domain 11
Ribosomal protein S5 domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
P-loop containing nucleoside triphosphate hydrolases RNA-binding domain, RBD 11
Alpha subunit of glutamate synthase, C-terminal domain Nucleotide-binding domain 11
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 11
FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) Protein kinase-like (PK-like) 11
L-aspartase-like Class II aaRS and biotin synthetases 11
PUA domain-like P-loop containing nucleoside triphosphate hydrolases 11
Phage tail proteins Phage tail proteins 11
CBS-domain pair Inosine monophosphate dehydrogenase (IMPDH) 11
BRCA2 tower domain Nucleic acid-binding proteins 11
Glutathione synthetase ATP-binding domain-like Glutathione synthetase ATP-binding domain-like 11
ARM repeat SH3-domain 11
P-loop containing nucleoside triphosphate hydrolases Macro domain-like 11
N-terminal domain of the delta subunit of the F1F0-ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase 11
Transmembrane di-heme cytochromes a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 11
PDZ domain-like Rubredoxin-like 11
Tudor/PWWP/MBT DNA repair protein MutS, domain III 11
SAP domain DNase I-like 11
HIT-like HIT-like 11
Class I glutamine amidotransferase-like GMP synthetase C-terminal dimerisation domain 11
TolA/TonB C-terminal domain Aminoacid dehydrogenase-like, N-terminal domain 11
Class II aaRS and biotin synthetases Anticodon-binding domain of PheRS 11
C-terminal domain of alpha and beta subunits of F1 ATP synthase Epsilon subunit of F1F0-ATP synthase N-terminal domain 11
Second domain of FERM PH domain-like 11
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 Nucleic acid-binding proteins 11
MHC antigen-recognition domain Protein kinase-like (PK-like) 11
Tropomyosin Apolipoprotein A-I 11
Eukaryotic type KH-domain (KH-domain type I) RNA-binding domain, RBD 11
Cna protein B-type domain Carboxypeptidase regulatory domain-like 11
Thiamin pyrophosphokinase, catalytic domain Thiamin pyrophosphokinase, substrate-binding domain 11
SAP domain WGR domain-like 11
Kelch motif S-adenosyl-L-methionine-dependent methyltransferases 11
RuvA domain 2-like RuvA domain 2-like 11
Urease, beta-subunit Metallo-dependent hydrolases 11
Adenine nucleotide alpha hydrolases-like DHS-like NAD/FAD-binding domain 11
P-loop containing nucleoside triphosphate hydrolases YacF-like 11
RNA-binding domain, RBD Photosystem I subunits PsaA/PsaB 11
C-terminal UvrC-binding domain of UvrB ApaG-like 11
SPOC domain-like C-terminal domain of Ku80 11
HAD-like Thioredoxin-like 11
HLH, helix-loop-helix DNA-binding domain ARM repeat 11
C2 domain (Calcium/lipid-binding domain, CaLB) MHC antigen-recognition domain 11
PsbU/PolX domain-like Nucleotidyltransferase 11
Bromodomain FYVE/PHD zinc finger 11
Nucleic acid-binding proteins TPR-like 11
Fe-S cluster assembly (FSCA) domain-like P-loop containing nucleoside triphosphate hydrolases 11
SAP domain SAP domain 11
PUG domain-like Ubiquitin-like 11
Clavaminate synthase-like DNA repair protein MutS, domain II 11
Ribosomal L27 protein-like P-loop containing nucleoside triphosphate hydrolases 11
Nucleic acid-binding proteins GAD domain-like 11
Single hybrid motif ClpP/crotonase 11
Translational machinery components HAD-like 11
PUA domain-like Ribosomal protein S5 domain 2-like 11
Oxidoreductase molybdopterin-binding domain Riboflavin synthase domain-like 11
CCCH zinc finger HIT-like 11
Thioredoxin-like Six-hairpin glycosidases 11
beta-sandwich domain of Sec23/24 WD40 repeat-like 11
Lipoxigenase Lipoxigenase 11
Lipovitellin-phosvitin complex, superhelical domain ARM repeat 11
Ran binding protein zinc finger-like EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 11
TPR-like Metallo-dependent phosphatases 11
F-box domain Quinoprotein alcohol dehydrogenase-like 11
Protein kinase-like (PK-like) alpha/beta-Hydrolases 11
POZ domain Pentapeptide repeat-like 11
Chaperone J-domain Homeodomain-like 11
Taf5 N-terminal domain-like WD40 repeat-like 11
F-box domain Protein kinase-like (PK-like) 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase S13-like H2TH domain 11
Protein kinase-like (PK-like) BEACH domain 11
ABC transporter transmembrane region FMN-linked oxidoreductases 11
F-box domain SET domain 11
Osmotin, thaumatin-like protein Osmotin, thaumatin-like protein 11
alpha-D-mannose-specific plant lectins FAD-binding/transporter-associated domain-like 11
Ribonuclease H-like HRDC-like 11
Arabinanase/levansucrase/invertase Arabinanase/levansucrase/invertase 11
HMA, heavy metal-associated domain Cu,Zn superoxide dismutase-like 11
Chromo domain-like Homeodomain-like 11
MOSC N-terminal domain-like PK beta-barrel domain-like 11
ARM repeat alpha/beta knot 11
beta and beta-prime subunits of DNA dependent RNA-polymerase Nqo5-like 11
NAP-like RNA-binding domain, RBD 11
FKBP-like Rhodanese/Cell cycle control phosphatase 11
Lipovitellin-phosvitin complex, superhelical domain Chaperone J-domain 11
RNI-like TRAF domain-like 11
BRCT domain DNA polymerase beta, N-terminal domain-like 11
Hypothetical protein SAV1430 Fe-S cluster assembly (FSCA) domain-like 11
Formyltransferase FMT C-terminal domain-like 11
beta-lactamase/transpeptidase-like MurE/MurF N-terminal domain 11
Tubby C-terminal domain-like Tubby C-terminal domain-like 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) SIS domain 11
eIF2alpha middle domain-like eIF-2-alpha, C-terminal domain 11
Carbamate kinase-like PUA domain-like 11
dsRNA-binding domain-like S-adenosyl-L-methionine-dependent methyltransferases 11
Acyl-CoA binding protein Ankyrin repeat 11
Ribosomal protein S3 C-terminal domain Cytochrome c oxidase subunit II-like, transmembrane region 11
F-box domain ApaG-like 11
Galactose mutarotase-like Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 11
Ubiquitin-like L domain-like 11
Protease propeptides/inhibitors PA domain 11
RING/U-box Putative isomerase YbhE 11
PH domain-like Prismane protein-like 11
Actin depolymerizing proteins C-terminal, gelsolin-like domain of Sec23/24 11
C2 domain (Calcium/lipid-binding domain, CaLB) alpha/beta-Hydrolases 11
RuBisCo, C-terminal domain Translation proteins SH3-like domain 11
Cytidine deaminase-like YbiA-like 11
Type II DNA topoisomerase GyrA/ParC C-terminal domain-like 11
EPT/RTPC-like EPT/RTPC-like 11
Glucocorticoid receptor-like (DNA-binding domain) WGR domain-like 11
"Winged helix" DNA-binding domain Regulatory protein AraC 11
Cytidine deaminase-like Cytidine deaminase-like 11
UBC-like UBC-like 11
Clavaminate synthase-like DNA repair protein MutS, domain III 11
FAD-linked reductases, C-terminal domain Retrovirus zinc finger-like domains 11
Ubiquitin-like Cap-Gly domain 11
alpha/beta knot Nucleic acid-binding proteins 11
t-snare proteins TPR-like 11
PRP4-like WD40 repeat-like 11
AbrB/MazE/MraZ-like MurE/MurF N-terminal domain 11
Glucocorticoid receptor-like (DNA-binding domain) HAD-like 11
P-loop containing nucleoside triphosphate hydrolases PspA lactotransferrin-binding region 11
ATP synthase (F1-ATPase), gamma subunit P-loop containing nucleoside triphosphate hydrolases 11
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 Eukaryotic type KH-domain (KH-domain type I) 11
Ribokinase-like Thiamin phosphate synthase 11
UraD-Like Transthyretin (synonym: prealbumin) 11
Chelatase Chlorophyll a-b binding protein 11
Ferritin-like Penicillin binding protein dimerisation domain 11
P-loop containing nucleoside triphosphate hydrolases beta-beta-alpha zinc fingers 11
S-adenosyl-L-methionine-dependent methyltransferases Penicillin binding protein dimerisation domain 11
Thioesterase/thiol ester dehydrase-isomerase PurM C-terminal domain-like 11
FYVE/PHD zinc finger GYF domain 11
Cap-Gly domain RNI-like 11
Ribonuclease PH domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
Metallo-hydrolase/oxidoreductase ATP-dependent DNA ligase DNA-binding domain 11
Ankyrin repeat TPR-like 11
beta-sandwich domain of Sec23/24 P-loop containing nucleoside triphosphate hydrolases 11
PUA domain-like SWIB/MDM2 domain 11
ARM repeat FabD/lysophospholipase-like 11
DAK1/DegV-like DhaL-like 11
Nucleic acid-binding proteins S-adenosyl-L-methionine-dependent methyltransferases 11
Tex N-terminal region-like Ribonuclease H-like 11
Starch-binding domain-like Glutathione synthetase ATP-binding domain-like 11
N-terminal domain of MutM-like DNA repair proteins S13-like H2TH domain 11
S-adenosyl-L-methionine-dependent methyltransferases PLP-dependent transferases 11
Calcyclin-binding protein-like HSP20-like chaperones 11
Ribose/Galactose isomerase RpiB/AlsB RmlC-like cupins 11
Eukaryotic type KH-domain (KH-domain type I) Retrovirus zinc finger-like domains 11
CCCH zinc finger WD40 repeat-like 11
Nucleotidylyl transferase Nucleic acid-binding proteins 11
FMN-binding split barrel YhbY-like 11
L domain-like ARM repeat 11
GYF domain SET domain 11
PH domain-like "Winged helix" DNA-binding domain 11
Obg GTP-binding protein N-terminal domain Obg GTP-binding protein C-terminal domain 11
Cysteine-rich domain FYVE/PHD zinc finger 11
CinA-like Nucleotidylyl transferase 11
WD40 repeat-like YVTN repeat-like/Quinoprotein amine dehydrogenase 11
FAD/NAD(P)-binding domain Retrovirus zinc finger-like domains 11
PP2C-like PP2C-like 11
Phosphohistidine domain Phosphoenolpyruvate/pyruvate domain 11
Nqo1 FMN-binding domain-like Nqo1C-terminal domain-like 11
BRCT domain post-AAA+ oligomerization domain-like 11
SNARE-like P-loop containing nucleoside triphosphate hydrolases 11
FAD/NAD(P)-binding domain RNA-binding domain, RBD 11
Chromo domain-like Ankyrin repeat 11
Putative methyltransferase TM0872, insert domain beta-lactamase/transpeptidase-like 11
Protein kinase-like (PK-like) (Phosphotyrosine protein) phosphatases II 11
N-utilization substance G protein NusG, N-terminal domain Translation proteins SH3-like domain 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Nucleotidylyl transferase 11
Cytochrome P450 alpha-D-mannose-specific plant lectins 11
Putative DNA-binding domain PheT/TilS domain 11
Homeodomain-like Bromodomain 11
FAD-linked reductases, C-terminal domain RNA-binding domain, RBD 11
Calcium-dependent phosphotriesterase WD40 repeat-like 11
2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain Alkaline phosphatase-like 11
Tryptophan synthase beta subunit-like PLP-dependent enzymes Tryptophan synthase beta subunit-like PLP-dependent enzymes 11
LDL receptor-like module Mannose 6-phosphate receptor domain 11
DUSP-like Ubiquitin-like 11
(Phosphotyrosine protein) phosphatases II NAD kinase/diacylglycerol kinase-like 11
F1F0 ATP synthase subunit C Ribosomal protein L36 11
DNA primase core P-loop containing nucleoside triphosphate hydrolases 11
YjgF-like YjgF-like 11
RNI-like ARM repeat 11
Tudor/PWWP/MBT DNA repair protein MutS, domain I 11
Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain 11
Periplasmic binding protein-like II Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain 11
PH domain-like BSD domain-like 11
HCP-like HIT/MYND zinc finger-like 11
Zn-dependent exopeptidases Carboxypeptidase regulatory domain-like 11
Leucine zipper domain RNA-binding domain, RBD 11
Thiamin diphosphate-binding fold (THDP-binding) Enolase C-terminal domain-like 11
CCCH zinc finger S-adenosyl-L-methionine-dependent methyltransferases 11
Ribosomal protein L22 Ribosomal protein S3 C-terminal domain 11
Adenine nucleotide alpha hydrolases-like GMP synthetase C-terminal dimerisation domain 11
CarD-like TRCF domain-like 11
ValRS/IleRS/LeuRS editing domain tRNA-binding arm 11
Molybdenum cofactor biosynthesis proteins Molybdenum cofactor biosynthesis proteins 11
Carbamoyl phosphate synthetase, large subunit connection domain Methylglyoxal synthase-like 11
Chromo domain-like Acyl-CoA N-acyltransferases (Nat) 11
ARM repeat Concanavalin A-like lectins/glucanases 11
Cysteine proteinases Sec-C motif 11
FAD/NAD(P)-binding domain HI0933 insert domain-like 11
WD40 repeat-like 3-carboxy-cis,cis-mucoante lactonizing enzyme 11
Thioredoxin-like ERP29 C domain-like 11
AbrB/MazE/MraZ-like Putative methyltransferase TM0872, insert domain 11
Aquaporin-like Metallo-hydrolase/oxidoreductase 11
Thiamin phosphate synthase P-loop containing nucleoside triphosphate hydrolases 11
ISP transmembrane anchor ISP domain 11
P-loop containing nucleoside triphosphate hydrolases D-aminoacid aminotransferase-like PLP-dependent enzymes 11
SAP domain CCCH zinc finger 11
RNA-binding domain, RBD Surp module (SWAP domain) 11
Class I glutamine amidotransferase-like Adenine nucleotide alpha hydrolases-like 11
Single hybrid motif Single hybrid motif 11
Ribosomal proteins S24e, L23 and L15e Nucleic acid-binding proteins 11
beta and beta-prime subunits of DNA dependent RNA-polymerase Photosystem I subunits PsaA/PsaB 11
Pre-PUA domain PUA domain-like 11
RING/U-box Cyclophilin-like 11
CBS-domain pair FAD-binding/transporter-associated domain-like 11
DHS-like NAD/FAD-binding domain Enolase N-terminal domain-like 11
Ribonuclease H-like Ribonuclease H-like 11

Jump to [ Top of page · Add/remove domain pairs · Add/remove genomes · Domain combination pairs ]