SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.


Domain combination pairs in Zea mays subsp. mays

All pairs of domain combinations at the superfamily level are listed here.
The identification of domain pairs does not account for the possibility of non-contiguous domains. Inserted, or interlaced, domains are seen as having a simple pair ordering.

  • For a list of unique full length architectures for this genome click here (can be slow).

Add or remove domain pairs

The links below permit the addition or removal of specific sets of domain combination pairs.


Jump to [ Top of page · Add/remove domain pairs · Domain combination pairs ]

Add or remove genomes

Change the list of genome two-letter codes in the 'Include genomes' box to include domain-pairs from those genomes.
Change the list of genomes in the 'Exclude genomes' box to exclude domain-pairs from those genomes.
List of all two-letter genome codes.

Add or remove genomes:
Include genomes:
Exclude genomes:


Jump to [ Top of page · Add/remove domain pairs · Add/remove genomes ]

Domain combination pairs

1688 domain combination pairs.
Click on a column heading to sort that column, or the 'View' button to see domain architetures for that domain pair combination.

Superfamily (N) Superfamily (C) Number of occurrances Number unique
L domain-like Protein kinase-like (PK-like) 27144
P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases 20355
RNA-binding domain, RBD RNA-binding domain, RBD 19526
Actin-like ATPase domain Actin-like ATPase domain 11513
Barwin-like endoglucanases PHL pollen allergen 1012
Thioredoxin-like GST C-terminal domain-like 926
L domain-like L domain-like 8440
RNI-like L domain-like 8333
Protein kinase-like (PK-like) EF-hand 823
F-box domain RNI-like 819
Cyclin-like Cyclin-like 788
HAD-like Calcium ATPase, transmembrane domain M 7717
TPR-like TPR-like 7519
P-loop containing nucleoside triphosphate hydrolases L domain-like 7421
Thiolase-like Thiolase-like 682
Calcium ATPase, transduction domain A Calcium ATPase, transmembrane domain M 6816
GroES-like NAD(P)-binding Rossmann-fold domains 685
RNI-like Protein kinase-like (PK-like) 6721
Tubulin nucleotide-binding domain-like Tubulin C-terminal domain-like 665
RING/U-box ARM repeat 658
Calcium ATPase, transduction domain A HAD-like 6314
ABC transporter transmembrane region P-loop containing nucleoside triphosphate hydrolases 6117
NAD(P)-binding Rossmann-fold domains Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 619
ARM repeat ARM repeat 6121
Multidrug resistance efflux transporter EmrE Multidrug resistance efflux transporter EmrE 597
CCCH zinc finger CCCH zinc finger 5820
P-loop containing nucleoside triphosphate hydrolases Translation proteins 5713
alpha-D-mannose-specific plant lectins Protein kinase-like (PK-like) 566
S-adenosyl-L-methionine-dependent methyltransferases S-adenosyl-L-methionine-dependent methyltransferases 565
CRAL/TRIO N-terminal domain CRAL/TRIO domain 567
Cupredoxins Cupredoxins 5510
Galactose-binding domain-like (Trans)glycosidases 5411
Riboflavin synthase domain-like Ferredoxin reductase-like, C-terminal NADP-linked domain 4912
beta-beta-alpha zinc fingers beta-beta-alpha zinc fingers 4815
FAD/NAD(P)-binding domain FAD-linked reductases, C-terminal domain 477
Terpenoid cyclases/Protein prenyltransferases Terpenoid synthases 475
GroEL-intermediate domain like GroEL apical domain-like 457
ENTH/VHS domain GAT-like domain 454
Homeodomain-like Homeodomain-like 4517
Concanavalin A-like lectins/glucanases Protein kinase-like (PK-like) 449
GroEL apical domain-like GroEL equatorial domain-like 437
Eukaryotic type KH-domain (KH-domain type I) Eukaryotic type KH-domain (KH-domain type I) 4116
GroEL-intermediate domain like GroEL equatorial domain-like 415
RING/U-box RING/U-box 4019
ABC transporter transmembrane region ABC transporter transmembrane region 4010
Metal cation-transporting ATPase, ATP-binding domain N Calcium ATPase, transmembrane domain M 398
Nucleic acid-binding proteins Nucleic acid-binding proteins 3919
RNA-binding domain, RBD Retrovirus zinc finger-like domains 396
Ran binding protein zinc finger-like Ran binding protein zinc finger-like 3913
F-box domain Galactose oxidase, central domain 395
Metal cation-transporting ATPase, ATP-binding domain N HAD-like 386
(Trans)glycosidases Beta-D-glucan exohydrolase, C-terminal domain 385
DNA-binding domain DNA-binding domain 3812
C2 domain (Calcium/lipid-binding domain, CaLB) C2 domain (Calcium/lipid-binding domain, CaLB) 3712
(Trans)glycosidases Glycosyl hydrolase domain 3711
ACT-like ACT-like 3715
Glucocorticoid receptor-like (DNA-binding domain) Glucocorticoid receptor-like (DNA-binding domain) 3711
NAD(P)-binding Rossmann-fold domains 6-phosphogluconate dehydrogenase C-terminal domain-like 379
TRAF domain-like POZ domain 366
Homeodomain-like Bet v1-like 357
Nucleotidyltransferase PAP/OAS1 substrate-binding domain 356
Calcium ATPase, transduction domain A Metal cation-transporting ATPase, ATP-binding domain N 355
P-loop containing nucleoside triphosphate hydrolases EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 354
HSP40/DnaJ peptide-binding domain HSP40/DnaJ peptide-binding domain 3514
FAD/NAD(P)-binding domain FAD/NAD(P)-binding domain 346
DNA-binding pseudobarrel domain CAD & PB1 domains 343
Thioredoxin-like Thioredoxin-like 3414
Ypt/Rab-GAP domain of gyp1p Ypt/Rab-GAP domain of gyp1p 344
Translation proteins EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 343
Aminoacid dehydrogenase-like, N-terminal domain NAD(P)-binding Rossmann-fold domains 335
Chaperone J-domain HSP40/DnaJ peptide-binding domain 3313
Actin-like ATPase domain Heat shock protein 70kD (HSP70), peptide-binding domain 328
GroES-like GroES-like 312
RING/U-box Nucleotide-diphospho-sugar transferases 304
WD40 repeat-like WD40 repeat-like 3013
"Winged helix" DNA-binding domain S-adenosyl-L-methionine-dependent methyltransferases 301
Formate/glycerate dehydrogenase catalytic domain-like NAD(P)-binding Rossmann-fold domains 287
PreATP-grasp domain Glutathione synthetase ATP-binding domain-like 2814
Homodimeric domain of signal transducing histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 2712
Phospholipase D/nuclease Phospholipase D/nuclease 2710
Actin-like ATPase domain Heat shock protein 70kD (HSP70), C-terminal subdomain 275
RNI-like RNI-like 2711
C2 domain (Calcium/lipid-binding domain, CaLB) Phospholipase D/nuclease 278
Nucleotidylyl transferase Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 2712
Purple acid phosphatase, N-terminal domain Metallo-dependent phosphatases 263
UBA-like Ubiquitin-like 2612
P-loop containing nucleoside triphosphate hydrolases RNI-like 2614
Voltage-gated potassium channels cAMP-binding domain-like 2610
Ubiquitin-like Ubiquitin-like 268
SNARE-like SNARE fusion complex 264
Galactose-binding domain-like Galactose-binding domain-like 265
POZ domain Skp1 dimerisation domain-like 253
Heat shock protein 70kD (HSP70), peptide-binding domain Heat shock protein 70kD (HSP70), C-terminal subdomain 244
Zn-dependent exopeptidases Bacterial exopeptidase dimerisation domain 244
Bet v1-like Bet v1-like 247
Nucleotide-diphospho-sugar transferases Trimeric LpxA-like enzymes 243
Plant invertase/pectin methylesterase inhibitor Pectin lyase-like 244
Ribosomal protein S5 domain 2-like Ribonuclease PH domain 2-like 233
LuxS/MPP-like metallohydrolase LuxS/MPP-like metallohydrolase 238
CBS-domain pair CBS-domain pair 238
MFS general substrate transporter MFS general substrate transporter 223
PAZ domain Ribonuclease H-like 225
EF-hand EF-hand 227
DnaJ/Hsp40 cysteine-rich domain HSP40/DnaJ peptide-binding domain 2212
ArfGap/RecO-like zinc finger C2 domain (Calcium/lipid-binding domain, CaLB) 214
RING/U-box TRAF domain-like 213
beta-sandwich domain of Sec23/24 Helical domain of Sec23/24 206
Protein kinase-like (PK-like) Protein kinase-like (PK-like) 208
CHY zinc finger-like Zinc hairpin stack 209
FAD-binding/transporter-associated domain-like FAD-linked oxidases, C-terminal domain 204
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Ribosomal protein S5 domain 2-like 2011
Protein kinase-like (PK-like) ARM repeat 2013
Lipase/lipooxygenase domain (PLAT/LH2 domain) Lipoxigenase 203
EF-hand Riboflavin synthase domain-like 203
Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) 205
RING/U-box vWA-like 204
CCCH zinc finger RNA-binding domain, RBD 195
Homodimeric domain of signal transducing histidine kinase CheY-like 198
WRKY DNA-binding domain WRKY DNA-binding domain 193
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheY-like 198
F-box domain Kelch motif 195
vWA-like beta-sandwich domain of Sec23/24 197
HMA, heavy metal-associated domain HMA, heavy metal-associated domain 188
Phosphoenolpyruvate/pyruvate domain PK C-terminal domain-like 183
Arabinanase/levansucrase/invertase Concanavalin A-like lectins/glucanases 182
PUA domain-like SET domain 183
F-box domain Tubby C-terminal domain-like 183
EF-hand Ferredoxin reductase-like, C-terminal NADP-linked domain 182
Terpenoid cyclases/Protein prenyltransferases Terpenoid cyclases/Protein prenyltransferases 186
PreATP-grasp domain Rudiment single hybrid motif 188
FYVE/PHD zinc finger FYVE/PHD zinc finger 187
Glutathione synthetase ATP-binding domain-like Rudiment single hybrid motif 188
Zn-finger domain of Sec23/24 vWA-like 187
Nucleic acid-binding proteins P-loop containing nucleoside triphosphate hydrolases 184
P-loop containing nucleoside triphosphate hydrolases Ribosomal protein S5 domain 2-like 188
Ribosomal protein S5 domain 2-like GHMP Kinase, C-terminal domain 175
Zinc hairpin stack RING/U-box 176
Phosphoenolpyruvate/pyruvate domain PK beta-barrel domain-like 173
PAP/OAS1 substrate-binding domain PAP/Archaeal CCA-adding enzyme, C-terminal domain 174
UDP-Glycosyltransferase/glycogen phosphorylase HAD-like 175
NTF2-like RNA-binding domain, RBD 172
EF-G C-terminal domain-like EF-G C-terminal domain-like 178
Helical domain of Sec23/24 C-terminal, gelsolin-like domain of Sec23/24 175
beta-sandwich domain of Sec23/24 C-terminal, gelsolin-like domain of Sec23/24 175
vWA-like Helical domain of Sec23/24 165
P-loop containing nucleoside triphosphate hydrolases FtsH protease domain-like 162
Acyl-CoA dehydrogenase NM domain-like Acyl-CoA dehydrogenase C-terminal domain-like 167
Ankyrin repeat RING/U-box 164
Rhodanese/Cell cycle control phosphatase Rhodanese/Cell cycle control phosphatase 163
dsRNA-binding domain-like dsRNA-binding domain-like 168
PK beta-barrel domain-like PK C-terminal domain-like 162
Cation efflux protein transmembrane domain-like Cation efflux protein cytoplasmic domain-like 166
Retrovirus zinc finger-like domains Retrovirus zinc finger-like domains 1611
Zn-finger domain of Sec23/24 beta-sandwich domain of Sec23/24 166
CHY zinc finger-like RING/U-box 165
Protein kinase-like (PK-like) TPR-like 154
Translation proteins EF-G C-terminal domain-like 156
Kelch motif Kelch motif 155
Cryptochrome/photolyase, N-terminal domain Cryptochrome/photolyase FAD-binding domain 153
WD40 repeat-like ARM repeat 159
Peptidase/esterase 'gauge' domain alpha/beta-Hydrolases 152
Clc chloride channel CBS-domain pair 156
Ribosomal L11/L12e N-terminal domain Ribosomal protein L11, C-terminal domain 154
Chaperone J-domain DnaJ/Hsp40 cysteine-rich domain 158
Periplasmic binding protein-like I Periplasmic binding protein-like II 143
P-loop containing nucleoside triphosphate hydrolases Class I glutamine amidotransferase-like 142
N-terminal domain of alpha and beta subunits of F1 ATP synthase P-loop containing nucleoside triphosphate hydrolases 148
P-loop containing nucleoside triphosphate hydrolases EF-G C-terminal domain-like 145
NAD(P)-binding Rossmann-fold domains LDH C-terminal domain-like 141
ARM repeat Clathrin adaptor appendage domain 146
PIN domain-like 5' to 3' exonuclease, C-terminal subdomain 145
RING/U-box FYVE/PHD zinc finger 148
UBA-like XPC-binding domain 146
Nucleotidyltransferase PAP/Archaeal CCA-adding enzyme, C-terminal domain 143
Subtilisin-like PA domain 144
EGF/Laminin Protein kinase-like (PK-like) 145
Thiamin diphosphate-binding fold (THDP-binding) TK C-terminal domain-like 143
Trypsin-like serine proteases PDZ domain-like 143
CAD & PB1 domains Protein kinase-like (PK-like) 142
Glutamine synthetase, N-terminal domain Glutamine synthetase/guanido kinase 144
UBA-like UBA-like 146
Ribosomal protein S5 domain 2-like HSP90 C-terminal domain 146
Nucleic acid-binding proteins Translation proteins SH3-like domain 134
PYP-like sensor domain (PAS domain) PYP-like sensor domain (PAS domain) 139
P-loop containing nucleoside triphosphate hydrolases C-terminal domain of alpha and beta subunits of F1 ATP synthase 137
Rudiment single hybrid motif Single hybrid motif 135
Adenine nucleotide alpha hydrolases-like Protein kinase-like (PK-like) 133
Glucocorticoid receptor-like (DNA-binding domain) AN1-like Zinc finger 132
Concanavalin A-like lectins/glucanases P-domain of calnexin/calreticulin 132
vWA-like C-terminal, gelsolin-like domain of Sec23/24 134
Protein kinase-like (PK-like) KA1-like 132
FAS1 domain FAS1 domain 134
P-loop containing nucleoside triphosphate hydrolases RING/U-box 137
Zn-finger domain of Sec23/24 Helical domain of Sec23/24 134
Enolase N-terminal domain-like Enolase C-terminal domain-like 133
HMA, heavy metal-associated domain Calcium ATPase, transduction domain A 1311
FAD/NAD(P)-binding domain FAD/NAD-linked reductases, dimerisation (C-terminal) domain 134
DNA-binding pseudobarrel domain DNA-binding pseudobarrel domain 136
Sigma2 domain of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 133
SNARE-like Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor 134
Plant lectins/antimicrobial peptides Lysozyme-like 132
"Winged helix" DNA-binding domain Protein kinase-like (PK-like) 135
Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 133
UROD/MetE-like UROD/MetE-like 132
Class II aaRS and biotin synthetases Class II aaRS ABD-related 129
P-loop containing nucleoside triphosphate hydrolases Ankyrin repeat 125
PreATP-grasp domain Single hybrid motif 124
Cdc48 domain 2-like P-loop containing nucleoside triphosphate hydrolases 128
Actin depolymerizing proteins Actin depolymerizing proteins 126
Calponin-homology domain, CH-domain P-loop containing nucleoside triphosphate hydrolases 124
BAR/IMD domain-like SH3-domain 124
EF-G C-terminal domain-like Ribosomal protein S5 domain 2-like 124
RING/U-box Protein kinase-like (PK-like) 127
SET domain RuBisCo LSMT C-terminal, substrate-binding domain 122
Single hybrid motif CoA-dependent acyltransferases 123
P-loop containing nucleoside triphosphate hydrolases post-AAA+ oligomerization domain-like 124
Aconitase iron-sulfur domain LeuD/IlvD-like 123
CheY-like Homeodomain-like 123
Protein kinase-like (PK-like) WD40 repeat-like 128
GAF domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 126
Protein kinase-like (PK-like) ACT-like 122
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase HSP90 C-terminal domain 125
Glutathione synthetase ATP-binding domain-like Single hybrid motif 124
YhbY-like YhbY-like 127
Nucleic acid-binding proteins Class II aaRS and biotin synthetases 124
PA domain RING/U-box 112
Phosphoglucomutase, first 3 domains Phosphoglucomutase, first 3 domains 115
ClpP/crotonase ClpP/crotonase 116
SWIB/MDM2 domain Plus3-like 119
Double Clp-N motif P-loop containing nucleoside triphosphate hydrolases 115
Class I glutamine amidotransferase-like Class I glutamine amidotransferase-like 112
HMA, heavy metal-associated domain HAD-like 119
TRAF domain-like TRAF domain-like 114
"Winged helix" DNA-binding domain RNA-binding domain, RBD 115
CCCH zinc finger Eukaryotic type KH-domain (KH-domain type I) 114
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Adenine nucleotide alpha hydrolases-like 113
GST C-terminal domain-like eEF1-gamma domain 112
FYVE/PHD zinc finger Homeodomain-like 115
Ribosomal protein L6 Ribosomal protein L6 113
Translation proteins Ribosomal protein S5 domain 2-like 113
Ubiquitin-like XPC-binding domain 114
Periplasmic binding protein-like II ACT-like 102
TPR-like RING/U-box 104
HMA, heavy metal-associated domain Calcium ATPase, transmembrane domain M 108
E set domains Ankyrin repeat 105
Acid proteases Saposin 104
Phosphoglucomutase, first 3 domains Phosphoglucomutase, C-terminal domain 104
ISP domain Bet v1-like 102
PLP-binding barrel Alanine racemase C-terminal domain-like 103
ARM repeat Hect, E3 ligase catalytic domain 105
P-loop containing nucleoside triphosphate hydrolases TGS-like 103
FYVE/PHD zinc finger P-loop containing nucleoside triphosphate hydrolases 108
Cullin repeat-like Cullin homology domain 102
N-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase 105
Thioredoxin-like eEF1-gamma domain 101
"Winged helix" DNA-binding domain E2F-DP heterodimerization region 102
Ubiquitin-like BAG domain 103
Single hybrid motif Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 103
Families 57/38 glycoside transferase middle domain Galactose mutarotase-like 105
S-adenosylmethionine synthetase S-adenosylmethionine synthetase 101
Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain SAICAR synthase-like 107
NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains 104
Zn-finger domain of Sec23/24 C-terminal, gelsolin-like domain of Sec23/24 103
HCP-like HCP-like 106
P-loop containing nucleoside triphosphate hydrolases Prokaryotic type KH domain (KH-domain type II) 92
GroEL apical domain-like SAICAR synthase-like 94
FKBP-like TPR-like 92
E set domains AMPKBI-like 92
ARM repeat "Winged helix" DNA-binding domain 91
Amine oxidase N-terminal region Amine oxidase catalytic domain 94
GAF domain-like Homodimeric domain of signal transducing histidine kinase 96
Glycoside hydrolase/deacetylase Galactose mutarotase-like 94
TPR-like Chaperone J-domain 95
ARM repeat Tudor/PWWP/MBT 96
PH domain-like FYVE/PHD zinc finger 93
Prokaryotic type KH domain (KH-domain type II) Ribosomal protein S3 C-terminal domain 92
TATA-box binding protein-like TATA-box binding protein-like 93
RNase III domain-like dsRNA-binding domain-like 98
(Phosphotyrosine protein) phosphatases II C2 domain (Calcium/lipid-binding domain, CaLB) 94
ARID-like HSP20-like chaperones 92
Glycoside hydrolase/deacetylase Families 57/38 glycoside transferase middle domain 94
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex CoA-dependent acyltransferases 92
RCC1/BLIP-II FYVE/PHD zinc finger 92
Diaminopimelate epimerase-like Diaminopimelate epimerase-like 91
Ribonuclease H-like DNA/RNA polymerases 95
Cysteine proteinases RING/U-box 96
Metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases 94
RING/U-box Homeodomain-like 96
Translation initiation factor 2 beta, aIF2beta, N-terminal domain Zinc-binding domain of translation initiation factor 2 beta 93
Carbamate kinase-like ALDH-like 81
2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain Alkaline phosphatase-like 82
Thioredoxin-like TPR-like 83
Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 85
"Winged helix" DNA-binding domain "Winged helix" DNA-binding domain 85
FYVE/PHD zinc finger Plus3-like 86
TRAF domain-like Cysteine proteinases 84
PYP-like sensor domain (PAS domain) GAF domain-like 85
RCC1/BLIP-II Protein kinase-like (PK-like) 85
GST C-terminal domain-like eEF-1beta-like 82
Sec7 domain ARM repeat 85
Protein kinase-like (PK-like) Ankyrin repeat 82
GAF domain-like GAF domain-like 85
Ran binding protein zinc finger-like RNA-binding domain, RBD 84
HD-domain/PDEase-like Nucleotidyltransferase 86
ACT-like NAD(P)-binding Rossmann-fold domains 85
PLC-like phosphodiesterases C2 domain (Calcium/lipid-binding domain, CaLB) 86
Homeodomain-like "Winged helix" DNA-binding domain 82
RING/U-box WD40 repeat-like 85
Thioesterase/thiol ester dehydrase-isomerase Thioesterase/thiol ester dehydrase-isomerase 82
SWIB/MDM2 domain SWIB/MDM2 domain 83
CBS-domain pair CAD & PB1 domains 84
FYVE/PHD zinc finger SWIB/MDM2 domain 86
EF-hand Mitochondrial carrier 82
E set domains (Trans)glycosidases 87
Rap30/74 interaction domains "Winged helix" DNA-binding domain 83
alpha-D-mannose-specific plant lectins Hairpin loop containing domain-like 84
PriA/YqbF domain GINS helical bundle-like 83
Thioredoxin-like Ubiquitin-like 84
P-loop containing nucleoside triphosphate hydrolases RecA protein, C-terminal domain 83
PA domain Zn-dependent exopeptidases 83
Cysteine proteinases Ubiquitin-like 84
EF-hand PLC-like phosphodiesterases 84
Transducin (alpha subunit), insertion domain P-loop containing nucleoside triphosphate hydrolases 83
Voltage-gated potassium channels Voltage-gated potassium channels 84
Voltage-gated potassium channels Ankyrin repeat 85
Chaperone J-domain 4Fe-4S ferredoxins 83
Clathrin adaptor appendage domain Subdomain of clathrin and coatomer appendage domain 86
FKBP-like FKBP-like 82
cAMP-binding domain-like Ankyrin repeat 85
Activating enzymes of the ubiquitin-like proteins Activating enzymes of the ubiquitin-like proteins 82
PLC-like phosphodiesterases PLC-like phosphodiesterases 83
P-loop containing nucleoside triphosphate hydrolases Signal peptide-binding domain 83
Ribosomal L27 protein-like Nucleic acid-binding proteins 72
Glutathione synthetase ATP-binding domain-like Succinyl-CoA synthetase domains 72
UDP-Glycosyltransferase/glycogen phosphorylase UDP-Glycosyltransferase/glycogen phosphorylase 73
Ribonuclease H-like HRDC-like 73
CO dehydrogenase ISP C-domain like CO dehydrogenase molybdoprotein N-domain-like 73
FAD-binding/transporter-associated domain-like CO dehydrogenase flavoprotein C-terminal domain-like 73
NagB/RpiA/CoA transferase-like D-ribose-5-phosphate isomerase (RpiA), lid domain 72
FYVE/PHD zinc finger Acyl-CoA N-acyltransferases (Nat) 76
PYP-like sensor domain (PAS domain) ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 74
Fe,Mn superoxide dismutase (SOD), N-terminal domain Fe,Mn superoxide dismutase (SOD), C-terminal domain 73
Domain of the SRP/SRP receptor G-proteins P-loop containing nucleoside triphosphate hydrolases 72
Plus3-like GYF domain 76
RNase III domain-like RNase III domain-like 77
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Nucleotidylyl transferase 74
FAD-binding/transporter-associated domain-like CO dehydrogenase molybdoprotein N-domain-like 73
CO dehydrogenase flavoprotein C-terminal domain-like CO dehydrogenase molybdoprotein N-domain-like 73
Carbamate kinase-like ACT-like 75
Cysteine-rich domain Cysteine-rich domain 73
t-snare proteins SNARE fusion complex 72
Cullin homology domain "Winged helix" DNA-binding domain 72
Zn-dependent exopeptidases Transferrin receptor-like dimerisation domain 73
Ubiquitin-like Zn-binding ribosomal proteins 71
CO dehydrogenase ISP C-domain like FAD-binding/transporter-associated domain-like 73
Translational machinery components L30e-like 73
DPP6 N-terminal domain-like alpha/beta-Hydrolases 72
DNA repair protein MutS, domain III P-loop containing nucleoside triphosphate hydrolases 75
CO dehydrogenase ISP C-domain like CO dehydrogenase flavoprotein C-terminal domain-like 73
ADC-like Cdc48 domain 2-like 74
NAD-binding domain of HMG-CoA reductase Substrate-binding domain of HMG-CoA reductase 73
PRP4-like Functional domain of the splicing factor Prp18 72
Saposin Saposin 72
HCP-like TPR-like 77
P-loop containing nucleoside triphosphate hydrolases E set domains 72
CRAL/TRIO domain Supernatant protein factor (SPF), C-terminal domain 73
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 72
P-loop containing nucleoside triphosphate hydrolases Homeodomain-like 76
Cysteine proteinases Granulin repeat 72
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 72
Ankyrin repeat POZ domain 75
P-loop containing nucleoside triphosphate hydrolases EF-hand 73
P-loop containing nucleoside triphosphate hydrolases RNA-binding domain, RBD 76
beta-N-acetylhexosaminidase-like domain (Trans)glycosidases 72
ADC-like P-loop containing nucleoside triphosphate hydrolases 74
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 72
Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 72
BRCT domain BRCT domain 76
Quinoprotein alcohol dehydrogenase-like WD40 repeat-like 74
Growth factor receptor domain Protein kinase-like (PK-like) 73
Galactose mutarotase-like (Trans)glycosidases 74
2Fe-2S ferredoxin-like CO dehydrogenase flavoprotein C-terminal domain-like 62
2Fe-2S ferredoxin-like alpha-helical ferredoxin 63
DNase I-like EF-hand 64
tRNA-binding arm Class II aaRS and biotin synthetases 62
Hairpin loop containing domain-like Protein kinase-like (PK-like) 64
Glutamyl tRNA-reductase catalytic, N-terminal domain Glutamyl tRNA-reductase dimerization domain 62
Chromo domain-like P-loop containing nucleoside triphosphate hydrolases 64
Serine metabolism enzymes domain ACT-like 63
Cytochrome c Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor 61
Oxidoreductase molybdopterin-binding domain E set domains 64
Rad51 N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 61
ARM repeat Subdomain of clathrin and coatomer appendage domain 64
HCP-like HIT/MYND zinc finger-like 65
CO dehydrogenase molybdoprotein N-domain-like Molybdenum cofactor-binding domain 62
Coiled-coil domain of nucleotide exchange factor GrpE Head domain of nucleotide exchange factor GrpE 62
Nitrite and sulphite reductase 4Fe-4S domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 63
Glutathione synthetase ATP-binding domain-like ClpP/crotonase 62
RING/U-box PUA domain-like 64
Aldolase NAD(P)-binding Rossmann-fold domains 61
Zinc beta-ribbon Cyclin-like 62
P-loop containing nucleoside triphosphate hydrolases PRTase-like 61
alpha-ketoacid dehydrogenase kinase, N-terminal domain ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 62
ValRS/IleRS/LeuRS editing domain Nucleotidylyl transferase 64
2Fe-2S ferredoxin-like Molybdenum cofactor-binding domain 62
WW domain P-loop containing nucleoside triphosphate hydrolases 61
Thioredoxin-like ERP29 C domain-like 62
2Fe-2S ferredoxin-like CO dehydrogenase molybdoprotein N-domain-like 62
CO dehydrogenase ISP C-domain like Molybdenum cofactor-binding domain 62
PH domain-like Oxysterol-binding protein-like 61
N-terminal nucleophile aminohydrolases (Ntn hydrolases) FMN-linked oxidoreductases 64
PreATP-grasp domain ClpP/crotonase 62
FAD-binding/transporter-associated domain-like Molybdenum cofactor-binding domain 62
CheY-like CheY-like 64
ENT-like Tudor/PWWP/MBT 63
2Fe-2S ferredoxin-like FAD-binding/transporter-associated domain-like 62
Leukotriene A4 hydrolase N-terminal domain Metalloproteases ("zincins"), catalytic domain 63
PX domain BAR/IMD domain-like 63
NAD(P)-binding Rossmann-fold domains Glutamyl tRNA-reductase dimerization domain 62
FMN-linked oxidoreductases Alpha subunit of glutamate synthase, C-terminal domain 64
Acyl-CoA binding protein Kelch motif 64
ARM repeat UBA-like 63
SWIB/MDM2 domain GYF domain 65
Bowman-Birk inhibitor, BBI Bowman-Birk inhibitor, BBI 62
Rudiment single hybrid motif ClpP/crotonase 62
F1F0 ATP synthase subunit C F1F0 ATP synthase subunit C 61
Ricin B-like lectins Ricin B-like lectins 63
dsRNA-binding domain-like Ribosomal protein S5 domain 2-like 61
NAD(P)-binding Rossmann-fold domains Serine metabolism enzymes domain 63
Nitrite/Sulfite reductase N-terminal domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 63
RNA-binding domain, RBD PABC (PABP) domain 63
CO dehydrogenase flavoprotein C-terminal domain-like Molybdenum cofactor-binding domain 62
Actin depolymerizing proteins VHP, Villin headpiece domain 62
Voltage-gated potassium channels EF-hand 63
Glutamyl tRNA-reductase catalytic, N-terminal domain NAD(P)-binding Rossmann-fold domains 62
HAD-like NTF2-like 62
Single hybrid motif ClpP/crotonase 62
Staphylococcal nuclease Staphylococcal nuclease 63
Thiamin diphosphate-binding fold (THDP-binding) DHS-like NAD/FAD-binding domain 62
Acyl-CoA dehydrogenase C-terminal domain-like Acyl-CoA dehydrogenase C-terminal domain-like 63
RmlC-like cupins RmlC-like cupins 63
ValRS/IleRS/LeuRS editing domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 64
CRAL/TRIO N-terminal domain Supernatant protein factor (SPF), C-terminal domain 62
Aldolase Aminoacid dehydrogenase-like, N-terminal domain 61
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Alpha subunit of glutamate synthase, C-terminal domain 64
WD40 repeat-like NHL repeat 61
UBA-like Hect, E3 ligase catalytic domain 63
Smc hinge domain P-loop containing nucleoside triphosphate hydrolases 65
UBA-like Elongation factor Ts (EF-Ts), dimerisation domain 62
(Trans)glycosidases Ricin B-like lectins 63
2Fe-2S ferredoxin-like CO dehydrogenase ISP C-domain like 62
POZ domain TPR-like 53
Oxidoreductase molybdopterin-binding domain Riboflavin synthase domain-like 53
PRTase-like Ribulose-phoshate binding barrel 53
NAD(P)-binding Rossmann-fold domains Galactose-binding domain-like 52
BRCT domain FYVE/PHD zinc finger 53
P-loop containing nucleoside triphosphate hydrolases Hypothetical protein YjiA, C-terminal domain 52
Nucleotidylyl transferase Nucleic acid-binding proteins 52
PH domain-like RCC1/BLIP-II 51
TPR-like CAD & PB1 domains 52
Adenine nucleotide alpha hydrolases-like Molybdenum cofactor biosynthesis proteins 53
Phosphohistidine domain Phosphoenolpyruvate/pyruvate domain 52
Flavoproteins Riboflavin synthase domain-like 53
PH domain-like Bet v1-like 53
P-loop containing nucleoside triphosphate hydrolases Bromodomain 52
Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like 52
Galactose mutarotase-like Glycosyl hydrolase domain 52
Adenine nucleotide alpha hydrolases-like Argininosuccinate synthetase, C-terminal domain 52
PAZ domain RNase III domain-like 55
E set domains Ferredoxin reductase-like, C-terminal NADP-linked domain 53
eIF2alpha middle domain-like eIF-2-alpha, C-terminal domain 51
F-box domain HCP-like 54
Class II aaRS and biotin synthetases ThrRS/AlaRS common domain 55
Flavoproteins Ferredoxin reductase-like, C-terminal NADP-linked domain 53
N-terminal, heterodimerisation domain of RBP7 (RpoE) Nucleic acid-binding proteins 52
Staphylococcal nuclease Tudor/PWWP/MBT 52
Glutathione synthetase ATP-binding domain-like Phosphohistidine domain 52
F-box domain ARM repeat 51
P-loop containing nucleoside triphosphate hydrolases dsRNA-binding domain-like 55
PUA domain-like Nucleotidylyl transferase 52
Tetrahydrobiopterin biosynthesis enzymes-like Tetrahydrobiopterin biosynthesis enzymes-like 52
Cytochrome b5-like heme/steroid binding domain Riboflavin synthase domain-like 53
Thioredoxin-like Cysteine-rich domain 53
N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 Translational machinery components 51
Concanavalin A-like lectins/glucanases P-loop containing nucleoside triphosphate hydrolases 53
Eukaryotic RPB5 N-terminal domain RPB5-like RNA polymerase subunit 51
Adenine nucleotide alpha hydrolases-like DHS-like NAD/FAD-binding domain 53
Nitrite/Sulfite reductase N-terminal domain-like Nitrite/Sulfite reductase N-terminal domain-like 52
PH domain-like GTPase activation domain, GAP 52
BEACH domain WD40 repeat-like 55
Amine oxidase N-terminal region Amine oxidase N-terminal region 52
P-loop containing nucleoside triphosphate hydrolases ARM repeat 54
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases Nucleic acid-binding proteins 52
E set domains Riboflavin synthase domain-like 53
Carbamoyl phosphate synthetase, small subunit N-terminal domain Class I glutamine amidotransferase-like 52
Nucleic acid-binding proteins eIF-2-alpha, C-terminal domain 51
UBC-like RING/U-box 53
PAZ domain dsRNA-binding domain-like 55
Glutathione synthetase ATP-binding domain-like Phosphoenolpyruvate/pyruvate domain 52
PUA domain-like P-loop containing nucleoside triphosphate hydrolases 53
Cytochrome b5-like heme/steroid binding domain Ferredoxin reductase-like, C-terminal NADP-linked domain 53
Nucleic acid-binding proteins eIF2alpha middle domain-like 51
RuBisCO, large subunit, small (N-terminal) domain RuBisCo, C-terminal domain 51
Thioredoxin-like alpha/beta-Hydrolases 53
E set domains CBS-domain pair 51
WW domain WW domain 52
Oxidoreductase molybdopterin-binding domain Ferredoxin reductase-like, C-terminal NADP-linked domain 53
ARM repeat TPR-like 53
Galactose oxidase, central domain E set domains 52
E set domains Cytochrome b5-like heme/steroid binding domain 53
POZ domain TAZ domain 53
N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 L30e-like 51
PreATP-grasp domain PreATP-grasp domain 53
RING/U-box RNA-binding domain, RBD 53
P-loop containing nucleoside triphosphate hydrolases Retrovirus zinc finger-like domains 54
Oxidoreductase molybdopterin-binding domain Cytochrome b5-like heme/steroid binding domain 53
ARID-like FYVE/PHD zinc finger 52
MurD-like peptide ligases, catalytic domain MurD-like peptide ligases, peptide-binding domain 54
Cysteine proteinases DUSP-like 54
PDZ domain-like ClpP/crotonase 52
MOSC N-terminal domain-like PK beta-barrel domain-like 51
PRTase-like PRTase-like 52
Periplasmic binding protein-like II Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain 51
Creatinase/aminopeptidase (Trans)glycosidases 51
RNI-like ARM repeat 51
Protease propeptides/inhibitors Subtilisin-like 53
Cullin repeat-like "Winged helix" DNA-binding domain 51
Cysteine proteinases WD40 repeat-like 53
E set domains Glycosyl hydrolase domain 54
P-loop containing nucleoside triphosphate hydrolases Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain 52
PA domain Transferrin receptor-like dimerisation domain 52
PH domain-like P-loop containing nucleoside triphosphate hydrolases 52
Glycerol-3-phosphate (1)-acyltransferase EF-hand 51
HIT/MYND zinc finger-like Creatinase/aminopeptidase 41
POZ domain Pentapeptide repeat-like 41
HAD-like Glycerol-3-phosphate (1)-acyltransferase 41
Actin-crosslinking proteins (Trans)glycosidases 41
Nucleic acid-binding proteins Eukaryotic type KH-domain (KH-domain type I) 42
Homeodomain-like FAD/NAD(P)-binding domain 42
Pseudo ankyrin repeat-like Ankyrin repeat 41
HIT/MYND zinc finger-like Cysteine proteinases 43
C2 domain (Calcium/lipid-binding domain, CaLB) Formin homology 2 domain (FH2 domain) 41
SBT domain Ankyrin repeat 42
Amine oxidase N-terminal region Thiolase-like 42
Fe-S cluster assembly (FSCA) domain-like Fe-S cluster assembly (FSCA) domain-like 42
P-loop containing nucleoside triphosphate hydrolases PAZ domain 44
6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 43
Alpha-L RNA-binding motif Pseudouridine synthase 42
(Trans)glycosidases Chitinase insertion domain 41
Translation proteins Translation proteins 42
Galactose-binding domain-like Glycosyl hydrolase domain 41
Ricin B-like lectins Glycosyl hydrolase domain 42
ARM repeat POZ domain 43
PH domain-like WD40 repeat-like 44
F-box domain NHL repeat 41
RNA-binding domain, RBD ENTH/VHS domain 41
N-terminal nucleophile aminohydrolases (Ntn hydrolases) alpha-helical ferredoxin 43
RNA-binding domain, RBD Surp module (SWAP domain) 41
FYVE/PHD zinc finger GYF domain 43
F-box domain WD40 repeat-like 41
Dihydrofolate reductase-like Thymidylate synthase/dCMP hydroxymethylase 42
Methionyl-tRNA synthetase (MetRS), Zn-domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 41
F-box domain P-loop containing nucleoside triphosphate hydrolases 43
Ubiquitin-like Hect, E3 ligase catalytic domain 41
Rhomboid-like UBA-like 41
Fumarylacetoacetate hydrolase, FAH, N-terminal domain FAH 41
Tudor/PWWP/MBT FYVE/PHD zinc finger 43
P-loop containing nucleoside triphosphate hydrolases RuvA domain 2-like 41
NAD(P)-binding Rossmann-fold domains UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 41
Cysteine proteinases Protein kinase-like (PK-like) 43
RING/U-box TAZ domain 43
Thiolase-like Amine oxidase catalytic domain 42
Actin depolymerizing proteins C-terminal, gelsolin-like domain of Sec23/24 43
Homeodomain-like FAD-linked reductases, C-terminal domain 42
P-loop containing nucleoside triphosphate hydrolases "Winged helix" DNA-binding domain 44
Trypsin-like serine proteases Trypsin-like serine proteases 42
Ankyrin repeat Ankyrin repeat 42
PH domain-like BEACH domain 44
PYP-like sensor domain (PAS domain) F-box domain 42
RING/U-box BRCT domain 42
Surp module (SWAP domain) ENTH/VHS domain 41
Cysteine proteinases UBA-like 42
YrdC/RibB RibA-like 42
Nucleic acid-binding proteins Retrovirus zinc finger-like domains 44
6-phosphogluconate dehydrogenase C-terminal domain-like UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 41
P-loop containing nucleoside triphosphate hydrolases alpha/beta-Hydrolases 43
PYP-like sensor domain (PAS domain) Protein kinase-like (PK-like) 43
PYP-like sensor domain (PAS domain) Galactose oxidase, central domain 42
RCC1/BLIP-II RCC1/BLIP-II 42
Macro domain-like Zn-dependent exopeptidases 42
Chaperone J-domain beta-beta-alpha zinc fingers 41
Surp module (SWAP domain) Ubiquitin-like 41
FAD/NAD(P)-binding domain EF-hand 41
Methionyl-tRNA synthetase (MetRS), Zn-domain Nucleotidylyl transferase 41
F-box domain HIT/MYND zinc finger-like 43
(Phosphotyrosine protein) phosphatases II Formin homology 2 domain (FH2 domain) 41
Tricorn protease domain 2 WD40 repeat-like 43
Dimeric alpha+beta barrel Dimeric alpha+beta barrel 41
EF-hand TPR-like 42
Acyl-CoA N-acyltransferases (Nat) Acyl-CoA N-acyltransferases (Nat) 41
PLP-dependent transferases PLP-dependent transferases 43
GYF domain RNA-binding domain, RBD 43
Acetyl-CoA synthetase-like ACP-like 43
WD40 repeat-like C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase 43
Class II aaRS and biotin synthetases Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) 44
Chromo domain-like Chromo domain-like 43
UBA-like NSFL1 (p97 ATPase) cofactor p47, SEP domain 42
SNARE fusion complex SNARE fusion complex 41
EF-hand C2 domain (Calcium/lipid-binding domain, CaLB) 42
Protein kinase-like (PK-like) P-loop containing nucleoside triphosphate hydrolases 43
Zinc-binding domain of translation initiation factor 2 beta ARM repeat 42
Surp module (SWAP domain) Surp module (SWAP domain) 41
Chaperone J-domain CSL zinc finger 41
Alpha subunit of glutamate synthase, C-terminal domain alpha-helical ferredoxin 43
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 42
P-loop containing nucleoside triphosphate hydrolases RNase III domain-like 44
L9 N-domain-like Ribosomal protein L9 C-domain 41
FF domain FF domain 43
Domain of the SRP/SRP receptor G-proteins Signal peptide-binding domain 41
Protein kinase-like (PK-like) PapD-like 43
Initiation factor IF2/eIF5b, domain 3 Translation proteins 43
P-loop containing nucleoside triphosphate hydrolases Microbial and mitochondrial ADK, insert "zinc finger" domain 41
Arp2/3 complex subunits Arp2/3 complex subunits 42
Formate/glycerate dehydrogenase catalytic domain-like ACT-like 42
alpha/beta-Hydrolases ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 42
Ubiquitin-like Cap-Gly domain 43
Formate/glycerate dehydrogenase catalytic domain-like Serine metabolism enzymes domain 42
alpha/beta-Hydrolases alpha/beta-Hydrolases 43
DNA-binding domain DNA-binding pseudobarrel domain 43
Obg GTP-binding protein N-terminal domain P-loop containing nucleoside triphosphate hydrolases 43
Translation initiation factor 2 beta, aIF2beta, N-terminal domain ARM repeat 42
Nucleic acid-binding proteins "Winged helix" DNA-binding domain 43
LEA14-like LEA14-like 41
Chromo domain-like S-adenosyl-L-methionine-dependent methyltransferases 42
Methionyl-tRNA synthetase (MetRS), Zn-domain Nucleic acid-binding proteins 41
Nucleotidyltransferase Poly A polymerase C-terminal region-like 43
FMN-linked oxidoreductases alpha-helical ferredoxin 43
vWA-like SPOC domain-like 43
Protein kinase-like (PK-like) NTF2-like 41
Riboflavin synthase domain-like Riboflavin synthase domain-like 41
PP2C-like PP2C-like 41
WD40 repeat-like DNase I-like 43
PIN domain-like Nucleic acid-binding proteins 33
HAD-like Riboflavin kinase-like 31
Actin-like ATPase domain ARM repeat 33
DNA repair protein MutS, domain II DNA repair protein MutS, domain III 32
Class II aaRS and biotin synthetases Translation proteins 33
Pseudouridine synthase Pseudouridine synthase 32
F-box domain SMI1/KNR4-like 32
Transmembrane di-heme cytochromes a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 31
(Phosphotyrosine protein) phosphatases II E set domains 32
Ribulose-phoshate binding barrel Ribulose-phoshate binding barrel 31
PH domain-like BSD domain-like 32
Restriction endonuclease-like RuvA domain 2-like 33
Metalloproteases ("zincins"), catalytic domain Formin homology 2 domain (FH2 domain) 31
Chromo domain-like Homeodomain-like 32
PUA domain-like Ribosomal protein S5 domain 2-like 32
Nucleotidylyl transferase Ribosomal protein L25-like 32
LysM domain LysM domain 32
Tropomyosin P-loop containing nucleoside triphosphate hydrolases 33
PH domain-like "Winged helix" DNA-binding domain 31
Protein kinase-like (PK-like) Tubulin nucleotide-binding domain-like 32
Kelch motif FKBP-like 32
Cysteine proteinases Calpain large subunit, middle domain (domain III) 33
Creatinase/prolidase N-terminal domain Creatinase/aminopeptidase 33
P-loop containing nucleoside triphosphate hydrolases HAND domain of the nucleosome remodeling ATPase ISWI 33
Endosomal sorting complex assembly domain VPS28 C-terminal domain-like 31
Cysteine proteinases Cysteine proteinases 33
Cap-Gly domain L domain-like 33
DNA-glycosylase Nudix 32
Pseudouridine synthase PUA domain-like 31
C-type lectin-like Protein kinase-like (PK-like) 31
Alpha subunit of glutamate synthase, C-terminal domain FAD/NAD(P)-binding domain 32
FMN-linked oxidoreductases FAD/NAD(P)-binding domain 32
L domain-like Tubulin nucleotide-binding domain-like 32
PEP carboxykinase N-terminal domain PEP carboxykinase-like 31
FYVE/PHD zinc finger SET domain 33
N-terminal nucleophile aminohydrolases (Ntn hydrolases) FAD/NAD(P)-binding domain 32
6-phosphogluconate dehydrogenase C-terminal domain-like YgbK-like 31
Transcription factor IIA (TFIIA), alpha-helical domain Transcription factor IIA (TFIIA), beta-barrel domain 32
HAD-like dsRNA-binding domain-like 32
YgbK-like Aldolase 31
Protein kinase-like (PK-like) Mannose-binding lectins 33
ACP-like Quinoprotein alcohol dehydrogenase-like 32
DUSP-like Ubiquitin-like 32
FYVE/PHD zinc finger PUA domain-like 32
SAP domain RNA-binding domain, RBD 31
Glutathione synthetase ATP-binding domain-like Glutathione synthetase ATP-binding domain-like 32
GAF domain-like CheY-like 32
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases tRNA-binding arm 32
RING/U-box Ran binding protein zinc finger-like 32
WGR domain-like Domain of poly(ADP-ribose) polymerase 33
FYVE/PHD zinc finger GroEL apical domain-like 32
2Fe-2S ferredoxin-like Glucocorticoid receptor-like (DNA-binding domain) 32
Nucleotidylyl transferase tRNA-binding arm 32
RCC1/BLIP-II Acid proteases 32
E set domains RNA-binding domain, RBD 31
Cysteine proteinases Triosephosphate isomerase (TIM) 33
Heat shock protein 70kD (HSP70), C-terminal subdomain Heat shock protein 70kD (HSP70), C-terminal subdomain 31
Adenine nucleotide alpha hydrolases-like RING/U-box 31
RING/U-box UBA-like 32
Cytochrome c oxidase subunit II-like, transmembrane region Cupredoxins 31
ThrRS/AlaRS common domain Class II aaRS ABD-related 33
Protein kinase-like (PK-like) UBC-like 33
DNA repair protein MutS, domain I DNA repair protein MutS, domain III 32
Macro domain-like CRAL/TRIO domain 31
HIT/MYND zinc finger-like SET domain 33
GroEL-intermediate domain like SAICAR synthase-like 31
RNA-binding domain, RBD PWI domain 32
F-box domain L domain-like 32
PYP-like sensor domain (PAS domain) Homodimeric domain of signal transducing histidine kinase 33
EF-hand RING/U-box 31
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 31
FYVE/PHD zinc finger Chromo domain-like 32
beta-carbonic anhydrase, cab beta-carbonic anhydrase, cab 32
Agglutinin Aerolisin/ETX pore-forming domain 31
PH domain-like ArfGap/RecO-like zinc finger 32
ARM repeat C2 domain (Calcium/lipid-binding domain, CaLB) 33
Tryptophan synthase beta subunit-like PLP-dependent enzymes ACT-like 31
ClpP/crotonase NAD(P)-binding Rossmann-fold domains 32
ARM repeat FabD/lysophospholipase-like 33
S-adenosyl-L-methionine-dependent methyltransferases FAD/NAD(P)-binding domain 32
Ribosomal L27 protein-like Eukaryotic type KH-domain (KH-domain type I) 31
Arabinanase/levansucrase/invertase Nucleotide-diphospho-sugar transferases 32
SNARE-like Domain of the SRP/SRP receptor G-proteins 31
Ubiquitin-like Homeodomain-like 32
Glucocorticoid receptor-like (DNA-binding domain) alpha-helical ferredoxin 32
PurM N-terminal domain-like PurM C-terminal domain-like 33
HAND domain of the nucleosome remodeling ATPase ISWI Homeodomain-like 33
HLH, helix-loop-helix DNA-binding domain ACT-like 31
alpha-helical ferredoxin FAD/NAD(P)-binding domain 32
PapD-like WD40 repeat-like 32
Ribonuclease H-like beta-beta-alpha zinc fingers 31
Ubiquitin-like HAD-like 31
TPR-like RNI-like 31
Mannose-binding lectins Mannose-binding lectins 33
Protein kinase-like (PK-like) Phosphoglycerate mutase-like 31
Aldolase 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 31
Calponin-homology domain, CH-domain EB1 dimerisation domain-like 32
Translation proteins ThrRS/AlaRS common domain 33
Heme-dependent peroxidases Heme-dependent peroxidases 31
DNA clamp DNA clamp 31
Insert subdomain of RNA polymerase alpha subunit RBP11-like subunits of RNA polymerase 31
Chaperone J-domain Sec63 N-terminal domain-like 33
GST C-terminal domain-like Nucleic acid-binding proteins 31
6-phosphogluconate dehydrogenase C-terminal domain-like Aldolase 31
NAD(P)-binding Rossmann-fold domains 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 31
N-terminal domain of adenylylcyclase associated protein, CAP C-terminal domain of adenylylcyclase associated protein 31
Kelch motif Metallo-dependent phosphatases 31
FYVE/PHD zinc finger TAZ domain 32
PWI domain Protein kinase-like (PK-like) 32
SNARE-like P-loop containing nucleoside triphosphate hydrolases 31
Protein kinase-like (PK-like) (Phosphotyrosine protein) phosphatases II 32
FYVE/PHD zinc finger SAICAR synthase-like 32
Ribonuclease H-like Eukaryotic type KH-domain (KH-domain type I) 31
Heme oxygenase-like HAD-like 31
SAP domain FYVE/PHD zinc finger 31
POZ domain POZ domain 33
PH domain-like HMG-box 31
Ankyrin repeat TPR-like 31
Aminopeptidase/glucanase lid domain Zn-dependent exopeptidases 32
WD40 repeat-like DPP6 N-terminal domain-like 32
Tubby C-terminal domain-like Tubby C-terminal domain-like 32
(Phosphotyrosine protein) phosphatases II Actin depolymerizing proteins 32
P-loop containing nucleoside triphosphate hydrolases Initiation factor IF2/eIF5b, domain 3 32
Elongation factor TFIIS domain 2 Zinc beta-ribbon 32
CYTH-like phosphatases P-loop containing nucleoside triphosphate hydrolases 33
DEK C-terminal domain SWIB/MDM2 domain 31
CCCH zinc finger RING/U-box 33
4Fe-4S ferredoxins P-loop containing nucleoside triphosphate hydrolases 31
L domain-like Cysteine proteinases 33
4'-phosphopantetheinyl transferase 4'-phosphopantetheinyl transferase 32
TPR-like "Winged helix" DNA-binding domain 31
Chromo domain-like Acyl-CoA N-acyltransferases (Nat) 32
ISP transmembrane anchor ISP domain 31
Creatinase/aminopeptidase "Winged helix" DNA-binding domain 32
DNA repair protein MutS, domain I DNA repair protein MutS, domain II 32
UBC-like Endosomal sorting complex assembly domain 32
SPOC domain-like C-terminal domain of Ku80 32
WD40 repeat-like Cyclophilin-like 32
P-loop containing nucleoside triphosphate hydrolases Phosphoglycerate mutase-like 32
DNase I-like DNase I-like 33
Thiamin pyrophosphokinase, catalytic domain Thiamin pyrophosphokinase, substrate-binding domain 31
Nucleotidylyl transferase Nucleotidylyl transferase 31
Tubulin nucleotide-binding domain-like Tubulin nucleotide-binding domain-like 31
Thioredoxin-like FAD-dependent thiol oxidase 31
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) Translation proteins 33
PapD-like Ankyrin repeat 32
N-terminal nucleophile aminohydrolases (Ntn hydrolases) PRTase-like 31
CAD & PB1 domains RING/U-box 33
UBA-like PUG domain-like 31
CheY-like P-loop containing nucleoside triphosphate hydrolases 32
Acetyl-CoA synthetase-like Quinoprotein alcohol dehydrogenase-like 32
2Fe-2S ferredoxin-like 4Fe-4S ferredoxins 21
GST C-terminal domain-like Nucleotidylyl transferase 21
F-box domain DPP6 N-terminal domain-like 21
Rhomboid-like Ran binding protein zinc finger-like 21
Nucleic acid-binding proteins S-adenosyl-L-methionine-dependent methyltransferases 21
GST C-terminal domain-like Ribosomal protein L25-like 21
ACT-like Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 22
NAD(P)-binding Rossmann-fold domains Actin-like ATPase domain 22
ATP-dependent DNA ligase DNA-binding domain Nucleic acid-binding proteins 22
Galactose oxidase, central domain Tropomyosin 21
Cysteine proteinases Thiamin diphosphate-binding fold (THDP-binding) 22
Tex N-terminal region-like Nucleic acid-binding proteins 21
lambda repressor-like DNA-binding domains Cyanase C-terminal domain 21
CCCH zinc finger WD40 repeat-like 21
Nqo1 FMN-binding domain-like Nqo1C-terminal domain-like 21
SMAD/FHA domain P-loop containing nucleoside triphosphate hydrolases 21
P-loop containing nucleoside triphosphate hydrolases Zinc beta-ribbon 22
Glutamine synthetase/guanido kinase Glucocorticoid receptor-like (DNA-binding domain) 22
Ribosomal protein S5 domain 2-like Type II DNA topoisomerase 22
FYVE/PHD zinc finger DNA-binding pseudobarrel domain 21
POZ domain Quinoprotein alcohol dehydrogenase-like 22
Tudor/PWWP/MBT DNA repair protein MutS, domain II 21
PLP-dependent transferases Ornithine decarboxylase C-terminal domain 21
Kelch motif Tropomyosin 22
BAR/IMD domain-like Ankyrin repeat 21
Nicotinate/Quinolinate PRTase N-terminal domain-like Nicotinate/Quinolinate PRTase C-terminal domain-like 22
TPR-like Metallo-dependent phosphatases 21
WD40 repeat-like Bromodomain 22
Activator of Hsp90 ATPase, Aha1 Bet v1-like 22
Putative DNA-binding domain PheT/TilS domain 21
NSFL1 (p97 ATPase) cofactor p47, SEP domain Ubiquitin-like 22
Chaperone J-domain ARM repeat 21
Class II aaRS ABD-related C-terminal domain of ProRS 22
ARM repeat FYVE/PHD zinc finger 22
N-terminal nucleophile aminohydrolases (Ntn hydrolases) SIS domain 21
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Cyclophilin-like 22
PGBD-like Metalloproteases ("zincins"), catalytic domain 21
Clavaminate synthase-like beta-beta-alpha zinc fingers 22
Chaperone J-domain Thioredoxin-like 22
Histone-fold ARM repeat 22
Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 Elongation factor TFIIS domain 2 21
SMI1/KNR4-like ApaG-like 21
Starch-binding domain-like Phosphoglycerate mutase-like 21
HIT/MYND zinc finger-like TPR-like 22
Bactericidal permeability-increasing protein, BPI Bactericidal permeability-increasing protein, BPI 22
MIT domain P-loop containing nucleoside triphosphate hydrolases 22
Calponin-homology domain, CH-domain ARM repeat 21
Zn-dependent exopeptidases Carboxypeptidase regulatory domain-like 21
ValRS/IleRS/LeuRS editing domain tRNA-binding arm 21
Nucleic acid-binding proteins SH2 domain 21
Acyl-CoA dehydrogenase C-terminal domain-like Ribosomal proteins S24e, L23 and L15e 21
Molybdenum cofactor biosynthesis proteins MoeA C-terminal domain-like 22
C-terminal domain of alpha and beta subunits of F1 ATP synthase Epsilon subunit of F1F0-ATP synthase N-terminal domain 21
F-box domain ApaG-like 21
F-box domain Pectin lyase-like 21
RuvA domain 2-like Nucleic acid-binding proteins 21
Protein kinase-like (PK-like) Thioredoxin-like 22
Kelch motif S-adenosyl-L-methionine-dependent methyltransferases 22
Second domain of FERM Prismane protein-like 21
P-loop containing nucleoside triphosphate hydrolases Sec63 N-terminal domain-like 22
Ribonuclease H-like Nucleic acid-binding proteins 21
Taf5 N-terminal domain-like WD40 repeat-like 22
RmlC-like cupins Arginase/deacetylase 21
Thioredoxin-like Acyl-CoA N-acyltransferases (Nat) 22
FAD/NAD(P)-binding domain Chromo domain-like 22
P-loop containing nucleoside triphosphate hydrolases Obg GTP-binding protein C-terminal domain 21
Smc hinge domain Tropomyosin 22
ClpP/crotonase 6-phosphogluconate dehydrogenase C-terminal domain-like 21
RING/U-box CRAL/TRIO N-terminal domain 22
Actin-like ATPase domain Protein kinase-like (PK-like) 22
Aspartate/glutamate racemase Aspartate/glutamate racemase 21
S15/NS1 RNA-binding domain HydB/Nqo4-like 21
Ribosome inactivating proteins (RIP) Ricin B-like lectins 21
Tex N-terminal region-like RuvA domain 2-like 21
Formiminotransferase domain of formiminotransferase-cyclodeaminase. Formiminotransferase domain of formiminotransferase-cyclodeaminase. 21
Ribosomal protein L7/12, oligomerisation (N-terminal) domain ClpS-like 21
Formate/glycerate dehydrogenase catalytic domain-like Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 21
4Fe-4S ferredoxins Formate dehydrogenase/DMSO reductase, domains 1-3 21
P-loop containing nucleoside triphosphate hydrolases TPR-like 22
Radical SAM enzymes Acyl-CoA N-acyltransferases (Nat) 21
DNA primase core P-loop containing nucleoside triphosphate hydrolases 21
Protein kinase-like (PK-like) NAD(P)-binding Rossmann-fold domains 22
PurM C-terminal domain-like Class I glutamine amidotransferase-like 22
Sec63 N-terminal domain-like E set domains 22
Rudiment single hybrid motif Cytochrome f subunit of the cytochrome b6f complex, transmembrane anchor 22
TPR-like HSP20-like chaperones 21
SAICAR synthase-like Clavaminate synthase-like 22
Thioredoxin-like Oxysterol-binding protein-like 22
Zn-binding ribosomal proteins Rhomboid-like 22
NAD(P)-binding Rossmann-fold domains Succinyl-CoA synthetase domains 21
PDZ domain-like Rubredoxin-like 21
Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 Zinc beta-ribbon 21
TAZ domain TAZ domain 21
Starch-binding domain-like P-loop containing nucleoside triphosphate hydrolases 21
BAR/IMD domain-like PH domain-like 21
Type II DNA topoisomerase GyrA/ParC C-terminal domain-like 21
AN1-like Zinc finger AN1-like Zinc finger 22
Protein kinase-like (PK-like) Carbamate kinase-like 21
Profilin (actin-binding protein) P-loop containing nucleoside triphosphate hydrolases 21
CCCH zinc finger S-adenosyl-L-methionine-dependent methyltransferases 21
Cysteine proteinases Actin-like ATPase domain 22
USP8 N-terminal domain-like JAB1/MPN domain 22
Domain of poly(ADP-ribose) polymerase ADP-ribosylation 22
L-aspartase-like Class II aaRS and biotin synthetases 22
RuvA domain 2-like RuvA domain 2-like 21
Ribosomal protein L6 Multidrug resistance efflux transporter EmrE 21
Restriction endonuclease-like Terpenoid cyclases/Protein prenyltransferases 22
WD40 repeat-like Putative isomerase YbhE 22
Tex N-terminal region-like SH2 domain 21
Mechanosensitive channel protein MscS (YggB), transmembrane region Sm-like ribonucleoproteins 21
CBS-domain pair Inosine monophosphate dehydrogenase (IMPDH) 21
NagB/RpiA/CoA transferase-like Nucleotidyltransferase 21
RNA-binding domain, RBD S-adenosyl-L-methionine-dependent methyltransferases 21
Glutathione synthetase ATP-binding domain-like Methylglyoxal synthase-like 21
Nucleotidyltransferase TGS-like 22
Clavaminate synthase-like Histone-fold 22
FAD/NAD(P)-binding domain SMAD/FHA domain 22
FabD/lysophospholipase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 21
P-loop containing nucleoside triphosphate hydrolases Epsilon subunit of F1F0-ATP synthase N-terminal domain 21
Translation proteins SH3-like domain Protein kinase-like (PK-like) 22
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 22
vWA-like C-terminal domain of Ku80 21
F-box domain NTF2-like 21
PreATP-grasp domain Methylglyoxal synthase-like 21
RNA polymerase subunits Ribonuclease H-like 22
(Trans)glycosidases Carboxypeptidase regulatory domain-like 21
Osmotin, thaumatin-like protein Protein kinase-like (PK-like) 22
(Trans)glycosidases RNI-like 21
Acyl-CoA N-acyltransferases (Nat) Bromodomain 22
Hypothetical protein SAV1430 Fe-S cluster assembly (FSCA) domain-like 21
SAICAR synthase-like Histone-fold 22
P-loop containing nucleoside triphosphate hydrolases Macro domain-like 22
Second domain of FERM PH domain-like 21
Putative DNA-binding domain Putative DNA-binding domain 21
Carbamoyl phosphate synthetase, large subunit connection domain Methylglyoxal synthase-like 21
Glutamine synthetase/guanido kinase Protein kinase-like (PK-like) 22
Putative DNA-binding domain Class II aaRS and biotin synthetases 21
P-loop containing nucleoside triphosphate hydrolases vWA-like 21
Tex N-terminal region-like Ribonuclease H-like 21
Nucleoside hydrolase Nucleoside hydrolase 22
Protein kinase-like (PK-like) Ribosomal protein S5 domain 2-like 22
UBA-like Thioredoxin-like 21
ARM repeat Heat shock protein 70kD (HSP70), peptide-binding domain 22
C2 domain (Calcium/lipid-binding domain, CaLB) vWA-like 22
2Fe-2S ferredoxin-like Formate dehydrogenase/DMSO reductase, domains 1-3 21
Tricorn protease domain 2 Cyclophilin-like 21
Nqo1 middle domain-like Nqo1C-terminal domain-like 21
Carbon-nitrogen hydrolase Adenine nucleotide alpha hydrolases-like 22
6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK Dihydropteroate synthetase-like 21
GYF domain CCCH zinc finger 21
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) ThrRS/AlaRS common domain 22
Eukaryotic type KH-domain (KH-domain type I) RNA-binding domain, RBD 21
Bromodomain Ferritin-like 21
Enolase C-terminal domain-like alpha/beta-Hydrolases 21
BRCT domain Domain of poly(ADP-ribose) polymerase 22
PH domain-like Prismane protein-like 21
SET domain TPR-like 22
Nqo1 FMN-binding domain-like Nqo1 middle domain-like 21
NAD(P)-linked oxidoreductase NAD(P)-linked oxidoreductase 21
BRCT domain DNA polymerase beta, N-terminal domain-like 21
DNA/RNA polymerases Lesion bypass DNA polymerase (Y-family), little finger domain 21
ATP-dependent DNA ligase DNA-binding domain DNA ligase/mRNA capping enzyme, catalytic domain 22
Eukaryotic type KH-domain (KH-domain type I) Retrovirus zinc finger-like domains 21
HD-domain/PDEase-like TGS-like 22
S-adenosyl-L-methionine-dependent methyltransferases Clathrin adaptor appendage domain 21
SufE/NifU BolA-like 21
RNA-binding domain, RBD Ribosome recycling factor, RRF 22
Cyclin-like alpha/beta-Hydrolases 22
P-loop containing nucleoside triphosphate hydrolases Prismane protein-like 21
ARM repeat SH3-domain 21
C2 domain (Calcium/lipid-binding domain, CaLB) Rhodanese/Cell cycle control phosphatase 22
Quinoprotein alcohol dehydrogenase-like Quinoprotein alcohol dehydrogenase-like 21
P-loop containing nucleoside triphosphate hydrolases Cyclin-like 22
UDP-Glycosyltransferase/glycogen phosphorylase Ribosomal protein S5 domain 2-like 21
TPR-like SMR domain-like 22
Kelch motif N-terminal nucleophile aminohydrolases (Ntn hydrolases) 22
Tudor/PWWP/MBT DNA repair protein MutS, domain III 21
Dcp2 domain-like Nudix 22
Voltage-gated potassium channels NAD(P)-binding Rossmann-fold domains 21
P-loop containing nucleoside triphosphate hydrolases Pre-protein crosslinking domain of SecA 22
Cytochrome f, large domain Rudiment single hybrid motif 22
EF-hand alpha/beta-Hydrolases 21
DEK C-terminal domain ssDNA-binding transcriptional regulator domain 21
TPR-like PUA domain-like 21
L domain-like PLP-dependent transferases 21
IlvD/EDD N-terminal domain-like LeuD/IlvD-like 21
Ribonuclease H-like Ribonuclease H-like 21
Leukotriene A4 hydrolase N-terminal domain ARM repeat 21
Glutamine synthetase/guanido kinase Thioredoxin-like 22
Glutamine synthetase/guanido kinase Ribosomal protein S5 domain 2-like 22
(Phosphotyrosine protein) phosphatases II NAD kinase/diacylglycerol kinase-like 21
PreATP-grasp domain Carbamoyl phosphate synthetase, large subunit connection domain 21
P-loop containing nucleoside triphosphate hydrolases PAH2 domain 22
DNA ligase/mRNA capping enzyme, catalytic domain Nucleic acid-binding proteins 22
PAH2 domain PAH2 domain 22
Ribonuclease H-like RuvA domain 2-like 21
Glutathione synthetase ATP-binding domain-like Carbamoyl phosphate synthetase, large subunit connection domain 21
PheT/TilS domain Class II aaRS and biotin synthetases 21
Tudor/PWWP/MBT DNA repair protein MutS, domain I 21
SMAD/FHA domain PP2C-like 22
RNA-binding domain, RBD Nucleotidylyl transferase 22
FAD/NAD(P)-binding domain HI0933 insert domain-like 21
SWIB/MDM2 domain eIF1-like 22
Protein kinase-like (PK-like) Glucocorticoid receptor-like (DNA-binding domain) 22
L domain-like Ubiquitin-like 22
L domain-like ARM repeat 22
L domain-like FabD/lysophospholipase-like 22
Metalloproteases ("zincins"), catalytic domain ARM repeat 21
BSD domain-like BSD domain-like 21
SH2 domain SH2 domain 21
FAD/NAD(P)-binding domain Thioredoxin-like 21
DUSP-like DUSP-like 22
FAD-linked reductases, C-terminal domain 4Fe-4S ferredoxins 21
F-box domain Clavaminate synthase-like 21
BAR/IMD domain-like ArfGap/RecO-like zinc finger 21
F-box domain YVTN repeat-like/Quinoprotein amine dehydrogenase 22
Acyl-CoA dehydrogenase NM domain-like Ribosomal proteins S24e, L23 and L15e 21
FAD/NAD(P)-binding domain P-loop containing nucleoside triphosphate hydrolases 22
RuvA domain 2-like SH2 domain 21
CoA-dependent acyltransferases CoA-dependent acyltransferases 21
Acyl-CoA N-acyltransferases (Nat) BRCT domain 22
ArfGap/RecO-like zinc finger Ankyrin repeat 21
EF-hand Calponin-homology domain, CH-domain 22
Cystatin/monellin Cystatin/monellin 21
Thioredoxin-like "Winged helix" DNA-binding domain 21
Galactose oxidase, central domain Kelch motif 22
PUG domain-like Ubiquitin-like 21
Class II aaRS and biotin synthetases C-terminal domain of ProRS 22
ARM repeat DPP6 N-terminal domain-like 21
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Type II DNA topoisomerase 22
Clavaminate synthase-like RING/U-box 21
DPP6 N-terminal domain-like DPP6 N-terminal domain-like 21
Amidase signature (AS) enzymes TPR-like 21
Glucocorticoid receptor-like (DNA-binding domain) Thioredoxin-like 22
Cysteine proteinases PLP-dependent transferases 21
Cysteine proteinases P-loop containing nucleoside triphosphate hydrolases 22
N-terminal domain of MutM-like DNA repair proteins S13-like H2TH domain 22
SAP domain DNase I-like 21
Obg GTP-binding protein N-terminal domain Obg GTP-binding protein C-terminal domain 21
Cytochrome f, large domain Cytochrome f subunit of the cytochrome b6f complex, transmembrane anchor 22
Cytidine deaminase-like Dihydrofolate reductase-like 22
Thioredoxin-like Ribosomal protein S5 domain 2-like 22
Adenine nucleotide alpha hydrolases-like Thioredoxin-like 21
Ribosome recycling factor, RRF Nucleotidylyl transferase 22
(Phosphotyrosine protein) phosphatases II (Phosphotyrosine protein) phosphatases II 21
Nucleotide-diphospho-sugar transferases E set domains 22
PLC-like phosphodiesterases Rhodanese/Cell cycle control phosphatase 22
PH domain-like Ankyrin repeat 21
UDP-Glycosyltransferase/glycogen phosphorylase GHMP Kinase, C-terminal domain 21
Second domain of FERM P-loop containing nucleoside triphosphate hydrolases 21
Ribonuclease H-like SH2 domain 21
BEACH domain NAD(P)-binding Rossmann-fold domains 21
RCC1/BLIP-II Saposin 21
Zinc beta-ribbon Zinc beta-ribbon 21
BRCT domain WGR domain-like 22
Glucocorticoid receptor-like (DNA-binding domain) Ribosomal protein S5 domain 2-like 22
L30e-like alpha/beta knot 21
FAD/NAD(P)-binding domain 4Fe-4S ferredoxins 21
F-box domain YWTD domain 21
Formate/glycerate dehydrogenase catalytic domain-like Formate/glycerate dehydrogenase catalytic domain-like 21
Hypothetical protein At3g22680 Homocysteine S-methyltransferase 11
Pectin lyase-like GroES-like 11
MoeA N-terminal region -like Molybdenum cofactor biosynthesis proteins 11
Hypothetical protein PA1324 Starch-binding domain-like 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Nucleotide-binding domain 11
FAD/NAD(P)-binding domain Trimeric LpxA-like enzymes 11
HLH, helix-loop-helix DNA-binding domain WD40 repeat-like 11
TGS-like ThrRS/AlaRS common domain 11
beta-beta-alpha zinc fingers S-adenosyl-L-methionine-dependent methyltransferases 11
NusB-like S-adenosyl-L-methionine-dependent methyltransferases 11
Ribosomal proteins S24e, L23 and L15e XseB-like 11
GroEL-intermediate domain like GroEL-intermediate domain like 11
Ran binding protein zinc finger-like Nudix 11
SMAD/FHA domain Phospholipase D/nuclease 11
UBC-like Class II aaRS ABD-related 11
Myosin rod fragments Bacterial hemolysins 11
Acid proteases UBA-like 11
CAD & PB1 domains UBA-like 11
BRCT domain P-loop containing nucleoside triphosphate hydrolases 11
Clavaminate synthase-like Clavaminate synthase-like 11
P-loop containing nucleoside triphosphate hydrolases Helical scaffold and wing domains of SecA 11
PRC-barrel domain PRC-barrel domain 11
F-box domain Thermostable phytase (3-phytase) 11
HCP-like Nucleic acid-binding proteins 11
DNA repair protein MutS, domain II P-loop containing nucleoside triphosphate hydrolases 11
Glucocorticoid receptor-like (DNA-binding domain) GHMP Kinase, C-terminal domain 11
TATA-box binding protein-like DNA-glycosylase 11
Ribosomal protein S5 domain 2-like Nucleic acid-binding proteins 11
PH domain-like Phospholipase D/nuclease 11
P-loop containing nucleoside triphosphate hydrolases HRDC-like 11
DNA breaking-rejoining enzymes NAC domain 11
AlbA-like P-loop containing nucleoside triphosphate hydrolases 11
Macro domain-like HIT-like 11
Flavoproteins Radical SAM enzymes 11
Ribosomal protein L19 (L19e) L domain-like 11
Ubiquitin-like Acid proteases 11
WD40 repeat-like TPR-like 11
Restriction endonuclease-like Terpenoid synthases 11
Ribonuclease H-like Protein kinase-like (PK-like) 11
MoeA N-terminal region -like MoeA C-terminal domain-like 11
Six-hairpin glycosidases Cysteine proteinases 11
Tubulin C-terminal domain-like SWIB/MDM2 domain 11
WD40 repeat-like SNARE fusion complex 11
Glucocorticoid receptor-like (DNA-binding domain) HAD-like 11
FAD/NAD(P)-binding domain Heme-dependent catalase-like 11
Urease, gamma-subunit Metallo-dependent hydrolases 11
Retrovirus zinc finger-like domains Cysteine proteinases 11
Concanavalin A-like lectins/glucanases WD40 repeat-like 11
P-loop containing nucleoside triphosphate hydrolases beta-beta-alpha zinc fingers 11
Homeodomain-like HCP-like 11
beta-sandwich domain of Sec23/24 Heme-dependent peroxidases 11
P-loop containing nucleoside triphosphate hydrolases Eukaryotic type KH-domain (KH-domain type I) 11
cAMP-binding domain-like cAMP-binding domain-like 11
S-adenosyl-L-methionine-dependent methyltransferases Tubulin nucleotide-binding domain-like 11
(Trans)glycosidases beta-Galactosidase/glucuronidase domain 11
ENT-like Homeodomain-like 11
C2 domain (Calcium/lipid-binding domain, CaLB) PRTase-like 11
Metallo-dependent phosphatases Terpenoid synthases 11
UDP-Glycosyltransferase/glycogen phosphorylase Nucleotide-diphospho-sugar transferases 11
Glutathione synthetase ATP-binding domain-like N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) 11
HMG-box HMG-box 11
Cysteine proteinases Zinc beta-ribbon 11
Cytochrome P450 Protein kinase-like (PK-like) 11
PurS-like PurM N-terminal domain-like 11
Ribonuclease PH domain 2-like Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 11
Concanavalin A-like lectins/glucanases PH domain-like 11
Tubulin nucleotide-binding domain-like RmlC-like cupins 11
ARM repeat alpha/beta-Hydrolases 11
RNA-binding domain, RBD WW domain 11
Phosphofructokinase Phosphofructokinase 11
PapD-like TPR-like 11
Nucleotidyltransferase EF-hand 11
Concanavalin A-like lectins/glucanases Calpain large subunit, middle domain (domain III) 11
Homeodomain-like Bromodomain 11
FGAM synthase PurL, linker domain PurM C-terminal domain-like 11
LuxS/MPP-like metallohydrolase P-loop containing nucleoside triphosphate hydrolases 11
DAK1/DegV-like DhaL-like 11
Ubiquitin-like HCP-like 11
Pectin lyase-like P-loop containing nucleoside triphosphate hydrolases 11
Ribonuclease PH domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
L-aspartase-like LuxS/MPP-like metallohydrolase 11
Methylglyoxal synthase-like Cytidine deaminase-like 11
Translation proteins PRC-barrel domain 11
UBA-like S-adenosyl-L-methionine-dependent methyltransferases 11
Bromodomain FYVE/PHD zinc finger 11
Clavaminate synthase-like Protein kinase-like (PK-like) 11
Chromo domain-like Ankyrin repeat 11
Acetyl-CoA synthetase-like Acetyl-CoA synthetase-like 11
Periplasmic binding protein-like II GlnB-like 11
NAD(P)-binding Rossmann-fold domains Ubiquitin-like 11
PYP-like sensor domain (PAS domain) dsRNA-binding domain-like 11
Cysteine proteinases Nucleotidylyl transferase 11
Multiheme cytochromes Ran binding protein zinc finger-like 11
HCP-like Homing endonucleases 11
PYP-like sensor domain (PAS domain) WD40 repeat-like 11
L domain-like Outer arm dynein light chain 1 11
Phospholipase D/nuclease Histone-fold 11
PP2C-like cAMP-binding domain-like 11
R3H domain Ankyrin repeat 11
Protein kinase-like (PK-like) BEACH domain 11
ARM repeat Glutamine synthetase, N-terminal domain 11
EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain Aldolase 11
Protein kinase-like (PK-like) Thiolase-like 11
ARM repeat Clavaminate synthase-like 11
Cullin repeat-like Substrate-binding domain of HMG-CoA reductase 11
Protein kinase-like (PK-like) HAD-like 11
Release factor Cyclin-like 11
Ribosomal protein S5 domain 2-like WD40 repeat-like 11
RNA-binding domain, RBD PLP-dependent transferases 11
Stabilizer of iron transporter SufD Calcium ATPase, transduction domain A 11
BRCT domain ADP-ribosylation 11
Cysteine proteinases SNARE fusion complex 11
Concanavalin A-like lectins/glucanases Cysteine proteinases 11
Aconitase iron-sulfur domain RCC1/BLIP-II 11
Hypothetical protein PA1324 Cna protein B-type domain 11
RNI-like PAH2 domain 11
vWA-like PP2C-like 11
F-box domain Ribosomal protein L9 C-domain 11
F-box domain Quinoprotein alcohol dehydrogenase-like 11
"Winged helix" DNA-binding domain Zinc beta-ribbon 11
Rhodanese/Cell cycle control phosphatase Nucleic acid-binding proteins 11
Dom34/Pelota N-terminal domain-like L30e-like 11
ARM repeat Cysteine proteinases 11
POZ domain HCP-like 11
Metallo-dependent phosphatases Translation proteins SH3-like domain 11
L domain-like PAH2 domain 11
P-loop containing nucleoside triphosphate hydrolases Zinc hairpin stack 11
Protein kinase-like (PK-like) beta-lactamase/transpeptidase-like 11
DNA repair protein MutS, domain III SMR domain-like 11
ENT-like ENT-like 11
FAD/NAD(P)-binding domain alpha/beta-Hydrolases 11
GYF domain SET domain 11
Protein prenylyltransferase L domain-like 11
L-aspartase-like L-aspartase-like 11
Cupredoxins Arp2/3 complex 21 kDa subunit ARPC3 11
Nucleic acid-binding proteins BRCA2 tower domain 11
Voltage-gated potassium channels Formin homology 2 domain (FH2 domain) 11
MFS general substrate transporter WD40 repeat-like 11
NAC domain NAC domain 11
PYP-like sensor domain (PAS domain) Kelch motif 11
Metallo-dependent hydrolases Cysteine proteinases 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase RING/U-box 11
Enolase C-terminal domain-like Enolase C-terminal domain-like 11
Ran binding protein zinc finger-like EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 11
Aspartate/ornithine carbamoyltransferase 14-3-3 protein 11
Sec63 N-terminal domain-like Sec63 N-terminal domain-like 11
alpha/beta-Hydrolases WW domain 11
SMAD/FHA domain BRCT domain 11
POZ domain Tricorn protease domain 2 11
PUA domain-like S-adenosyl-L-methionine-dependent methyltransferases 11
Oxygen-evolving enhancer protein 3, Cyclophilin-like 11
Ribosomal proteins S24e, L23 and L15e Chaperone J-domain 11
Protein kinase-like (PK-like) FAD/NAD(P)-binding domain 11
RNA-binding domain, RBD ARM repeat 11
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 Nucleic acid-binding proteins 11
Ribosomal protein S5 domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
Ribonuclease PH domain 2-like Nucleic acid-binding proteins 11
R1 subunit of ribonucleotide reductase, N-terminal domain PFL-like glycyl radical enzymes 11
MFS general substrate transporter Protein kinase-like (PK-like) 11
Ankyrin repeat S-adenosyl-L-methionine-dependent methyltransferases 11
ACP-like ACP-like 11
Hypothetical protein At3g22680 Hypothetical protein At3g22680 11
Tricorn protease N-terminal domain alpha/beta-Hydrolases 11
Triosephosphate isomerase (TIM) NAD(P)-binding Rossmann-fold domains 11
Pectin lyase-like Protein kinase-like (PK-like) 11
Protein kinase-like (PK-like) alpha/beta-Hydrolases 11
Class I glutamine amidotransferase-like Adenine nucleotide alpha hydrolases-like 11
Chaperone J-domain HSC20 (HSCB), C-terminal oligomerisation domain 11
Chaperone J-domain Chaperone J-domain 11
Pectin lyase-like Pectin lyase-like 11
Urease, beta-subunit Composite domain of metallo-dependent hydrolases 11
HMA, heavy metal-associated domain Metal cation-transporting ATPase, ATP-binding domain N 11
NAD(P)-linked oxidoreductase N-terminal nucleophile aminohydrolases (Ntn hydrolases) 11
Metallo-dependent hydrolases Glutamine synthetase/guanido kinase 11
PurS-like Class I glutamine amidotransferase-like 11
Metallo-dependent phosphatases Nucleotide-diphospho-sugar transferases 11
beta-Galactosidase/glucuronidase domain beta-Galactosidase/glucuronidase domain 11
ArfGap/RecO-like zinc finger Ribulose-phoshate binding barrel 11
(Trans)glycosidases Retrovirus zinc finger-like domains 11
Carbamate kinase-like NAD(P)-binding Rossmann-fold domains 11
Riboflavin synthase domain-like S-adenosylmethionine decarboxylase 11
FAD/NAD(P)-binding domain Cullin repeat-like 11
SRF-like NAD-binding domain of HMG-CoA reductase 11
ArfGap/RecO-like zinc finger PRTase-like 11
Trigger factor ribosome-binding domain Triger factor/SurA peptide-binding domain-like 11
TPR-like FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) 11
Ribonuclease H-like Tubulin nucleotide-binding domain-like 11
Concanavalin A-like lectins/glucanases RING/U-box 11
Cysteine proteinases NAD(P)-binding Rossmann-fold domains 11
FAD/NAD(P)-binding domain Acetyl-CoA synthetase-like 11
Protein kinase-like (PK-like) PH domain-like 11
Ferredoxin reductase-like, C-terminal NADP-linked domain Homeodomain-like 11
PUA domain-like eIF1-like 11
Cyclophilin-like RNA-binding domain, RBD 11
Protein kinase-like (PK-like) Zinc hairpin stack 11
EGF/Laminin EGF/Laminin 11
BRCT domain DNA/RNA polymerases 11
Ran binding protein zinc finger-like P-loop containing nucleoside triphosphate hydrolases 11
WD40 repeat-like dsRNA-binding domain-like 11
EF-hand CAD & PB1 domains 11
Tropomyosin Myosin rod fragments 11
RNI-like Zinc beta-ribbon 11
14-3-3 protein RNA-binding domain, RBD 11
Alpha subunit of glutamate synthase, C-terminal domain Nucleotide-binding domain 11
N-utilization substance G protein NusG, N-terminal domain Translation proteins SH3-like domain 11
PAZ domain RNA-binding domain, RBD 11
Cysteine proteinases Acid proteases 11
SET domain SET domain 11
4Fe-4S ferredoxins Metallo-hydrolase/oxidoreductase 11
Calcium-dependent phosphotriesterase alpha/beta-Hydrolases 11
L9 N-domain-like Ribonuclease H-like 11
Translation proteins Nucleotide-diphospho-sugar transferases 11
SSo0622-like S-adenosyl-L-methionine-dependent methyltransferases 11
V-type ATPase subunit E-like Acyl-CoA N-acyltransferases (Nat) 11
BRCA2 helical domain Nucleic acid-binding proteins 11
Formin homology 2 domain (FH2 domain) Cyclophilin-like 11
ISP domain Chlorophyll a-b binding protein 11
Chaperone J-domain UDP-Glycosyltransferase/glycogen phosphorylase 11
Nucleic acid-binding proteins GAD domain-like 11
Nucleotide-diphospho-sugar transferases Nucleotide-diphospho-sugar transferases 11
Concanavalin A-like lectins/glucanases SH2 domain 11
PIN domain-like Chromo domain-like 11
Molybdenum cofactor biosynthesis proteins Molybdenum cofactor biosynthesis proteins 11
BRCA2 helical domain BRCA2 tower domain 11
Ribonuclease H-like Heme-dependent peroxidases 11
ISY1 domain-like ISY1 domain-like 11
Thioredoxin-like GHMP Kinase, C-terminal domain 11
Ribose/Galactose isomerase RpiB/AlsB RmlC-like cupins 11
5' to 3' exonuclease, C-terminal subdomain Chromo domain-like 11
Ribonuclease H-like Enolase N-terminal domain-like 11
C-terminal, gelsolin-like domain of Sec23/24 FAD/NAD(P)-binding domain 11
DnaJ/Hsp40 cysteine-rich domain F-box domain 11
"Winged helix" DNA-binding domain CRAL/TRIO domain 11
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 Eukaryotic type KH-domain (KH-domain type I) 11
Class I glutamine amidotransferase-like GMP synthetase C-terminal dimerisation domain 11
NAD(P)-binding Rossmann-fold domains Thioredoxin-like 11
HIT-like HIT-like 11
F-box domain LysM domain 11
Ribonuclease H-like alpha/beta-Hydrolases 11
Cysteine proteinases RNA-binding domain, RBD 11
Cytochrome P450 Acetyl-CoA synthetase-like 11
SAP domain Domain of poly(ADP-ribose) polymerase 11
Carboxypeptidase regulatory domain-like Cna protein B-type domain 11
Ypt/Rab-GAP domain of gyp1p Formin homology 2 domain (FH2 domain) 11
FGAM synthase PurL, linker domain PurM N-terminal domain-like 11
alpha/beta-Hydrolases Oxysterol-binding protein-like 11
Galactose mutarotase-like Starch-binding domain-like 11
YjgF-like YjgF-like 11
Carbamate kinase-like Acyl-CoA N-acyltransferases (Nat) 11
GAT-like domain Tudor/PWWP/MBT 11
Retrovirus zinc finger-like domains RING/U-box 11
LysM domain Protein kinase-like (PK-like) 11
alpha/beta-Hydrolases FYVE/PHD zinc finger 11
Lipocalins Lipocalins 11
Sec1/munc18-like (SM) proteins ARM repeat 11
Trimeric LpxA-like enzymes Heme-dependent catalase-like 11
Glucocorticoid receptor-like (DNA-binding domain) Domain of poly(ADP-ribose) polymerase 11
Protein kinase-like (PK-like) Mitochondrial carrier 11
Riboflavin synthase domain-like ClpP/crotonase 11
vWA-like Arp2/3 complex subunits 11
Osmotin, thaumatin-like protein Class II aaRS ABD-related 11
(Trans)glycosidases Protein kinase-like (PK-like) 11
HMG-box Protein kinase-like (PK-like) 11
FAD/NAD(P)-binding domain Retrovirus zinc finger-like domains 11
ACP-like Heme-dependent catalase-like 11
Nucleic acid-binding proteins Chaperone J-domain 11
Nucleotide-diphospho-sugar transferases Ankyrin repeat 11
Ran binding protein zinc finger-like DNase I-like 11
ACT-like Formyltransferase 11
P-loop containing nucleoside triphosphate hydrolases SMR domain-like 11
Protein kinase-like (PK-like) GHMP Kinase, C-terminal domain 11
PLP-dependent transferases Protein kinase-like (PK-like) 11
TSP9-like 14-3-3 protein 11
Clavaminate synthase-like Glutamine synthetase/guanido kinase 11
beta-beta-alpha zinc fingers CCCH zinc finger 11
Protein kinase-like (PK-like) NAD-binding domain of HMG-CoA reductase 11
Cysteine proteinases S-adenosyl-L-methionine-dependent methyltransferases 11
"Winged helix" DNA-binding domain Metallo-dependent phosphatases 11
CorA soluble domain-like Magnesium transport protein CorA, transmembrane region 11
WGR domain-like ADP-ribosylation 11
Cytidine deaminase-like YbiA-like 11
Riboflavin synthase domain-like Histone-fold 11
Tudor/PWWP/MBT Tudor/PWWP/MBT 11
Tropomyosin Apolipoprotein A-I 11
Starch-binding domain-like Nucleic acid-binding proteins 11
Outer arm dynein light chain 1 Protein kinase-like (PK-like) 11
SSo0622-like Kelch motif 11
Translation proteins Terpenoid synthases 11
UBC-like Class II aaRS and biotin synthetases 11
Dom34/Pelota N-terminal domain-like Translational machinery components 11
Chelatase Chlorophyll a-b binding protein 11
Quinoprotein alcohol dehydrogenase-like C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase 11
Trimeric LpxA-like enzymes P-loop containing nucleoside triphosphate hydrolases 11
WRKY DNA-binding domain Eukaryotic type KH-domain (KH-domain type I) 11
Cysteine proteinases Galactose-binding domain-like 11
PreATP-grasp domain N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) 11
Protease propeptides/inhibitors PA domain 11
beta-Galactosidase/glucuronidase domain Galactose mutarotase-like 11
Urease, gamma-subunit Urease, beta-subunit 11
ATP synthase (F1-ATPase), gamma subunit WD40 repeat-like 11
NAD-binding domain of HMG-CoA reductase Chaperone J-domain 11
Ran binding protein zinc finger-like Translation proteins 11
Translation proteins SH3-like domain Terpenoid synthases 11
WW domain S-adenosyl-L-methionine-dependent methyltransferases 11
Acid proteases Cullin repeat-like 11
Tudor/PWWP/MBT Mitochondrial carrier 11
Metallo-dependent phosphatases Starch-binding domain-like 11
Subtilisin-like Subtilisin-like 11
Urease, gamma-subunit Composite domain of metallo-dependent hydrolases 11
RmlC-like cupins P-loop containing nucleoside triphosphate hydrolases 11
PurM C-terminal domain-like PurM C-terminal domain-like 11
P-loop containing nucleoside triphosphate hydrolases HIT-like 11
ARM repeat Glutamine synthetase/guanido kinase 11
WD40 repeat-like Acid proteases 11
Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain Tropomyosin 11
Class II aaRS and biotin synthetases GAD domain-like 11
Triosephosphate isomerase (TIM) Nucleotide-diphospho-sugar transferases 11
PLP-dependent transferases MOSC N-terminal domain-like 11
SPOC domain-like SAP domain 11
Ribosomal L11/L12e N-terminal domain GAT-like domain 11
Protein prenylyltransferase Outer arm dynein light chain 1 11
PRP4-like WD40 repeat-like 11
PYP-like sensor domain (PAS domain) CheY-like 11
PurS-like FGAM synthase PurL, linker domain 11
DHS-like NAD/FAD-binding domain DHS-like NAD/FAD-binding domain 11
Ankyrin repeat L domain-like 11
FAD/NAD(P)-binding domain NAD(P)-binding Rossmann-fold domains 11
Phosphoglycerate kinase S-adenosyl-L-methionine-dependent methyltransferases 11
dsRNA-binding domain-like S-adenosyl-L-methionine-dependent methyltransferases 11
Homeodomain-like PP2C-like 11
Translation proteins SH3-like domain NAD(P)-binding Rossmann-fold domains 11
Acyl-CoA binding protein P-loop containing nucleoside triphosphate hydrolases 11
CHY zinc finger-like CHY zinc finger-like 11
Osmotin, thaumatin-like protein ARM repeat 11
Release factor BEACH domain 11
L domain-like NAD(P)-binding Rossmann-fold domains 11
Class II aaRS and biotin synthetases Anticodon-binding domain of PheRS 11
L-aspartase-like Class II aaRS ABD-related 11
Cytochrome P450 Cytochrome P450 11
Phosphoenolpyruvate/pyruvate domain Metal cation-transporting ATPase, ATP-binding domain N 11
eIF4e-like RING/U-box 11
Protein kinase-like (PK-like) Heat shock protein 70kD (HSP70), peptide-binding domain 11
Adenine nucleotide alpha hydrolases-like GMP synthetase C-terminal dimerisation domain 11
Periplasmic binding protein-like II Heme-dependent peroxidases 11
Alkaline phosphatase-like DHS-like NAD/FAD-binding domain 11
Cyclophilin-like Cyclophilin-like 11
Cytochrome b5-like heme/steroid binding domain Cytochrome b5-like heme/steroid binding domain 11
Clathrin heavy-chain terminal domain ARM repeat 11
Nucleic acid-binding proteins Nqo5-like 11
Protein kinase-like (PK-like) CBS-domain pair 11
Thioredoxin-like NHL repeat 11
FYVE/PHD zinc finger Clavaminate synthase-like 11
Class I glutamine amidotransferase-like ADC synthase 11
Alkaline phosphatase-like Homeodomain-like 11
CRAL/TRIO domain N-terminal nucleophile aminohydrolases (Ntn hydrolases) 11
HD-domain/PDEase-like ACT-like 11
Protein kinase-like (PK-like) ArfGap/RecO-like zinc finger 11
Starch-binding domain-like Galactose-binding domain-like 11
S-adenosyl-L-methionine-dependent methyltransferases PLP-dependent transferases 11
FYVE/PHD zinc finger Ankyrin repeat 11
Cysteine proteinases Ankyrin repeat 11
C-terminal, gelsolin-like domain of Sec23/24 VHP, Villin headpiece domain 11
Formate/glycerate dehydrogenase catalytic domain-like Acyl-CoA N-acyltransferases (Nat) 11
Ribosomal protein L11, C-terminal domain GAT-like domain 11
Mog1p/PsbP-like Mog1p/PsbP-like 11
Nucleic acid-binding proteins FYVE/PHD zinc finger 11
Cyclin-like Mitochondrial carrier 11
Translation proteins Terpenoid cyclases/Protein prenyltransferases 11
F-box domain Protein kinase-like (PK-like) 11
SGNH hydrolase Cyclin-like 11
L domain-like DHS-like NAD/FAD-binding domain 11
Ribonuclease PH domain 2-like Ribonuclease PH domain 2-like 11
FYVE/PHD zinc finger TPR-like 11
YrdC/RibB HD-domain/PDEase-like 11
Plant invertase/pectin methylesterase inhibitor Formin homology 2 domain (FH2 domain) 11
E set domains E set domains 11
RING/U-box Ribosomal protein L1 11
Acyl-CoA dehydrogenase NM domain-like Acyl-CoA dehydrogenase NM domain-like 11
Formyltransferase FMT C-terminal domain-like 11
Metallo-dependent phosphatases P-loop containing nucleoside triphosphate hydrolases 11
Aldolase Nucleic acid-binding proteins 11
HAD-like BRCT domain 11
Glucocorticoid receptor-like (DNA-binding domain) WGR domain-like 11
CRAL/TRIO N-terminal domain N-terminal nucleophile aminohydrolases (Ntn hydrolases) 11
Probable bacterial effector-binding domain Probable bacterial effector-binding domain 11
Actin-crosslinking proteins Clavaminate synthase-like 11
Chaperone J-domain E set domains 11
Hypothetical protein PA1324 Carboxypeptidase regulatory domain-like 11
vWA-like SAP domain 11
Ferredoxin reductase-like, C-terminal NADP-linked domain Cytochrome P450 11
Protein kinase-like (PK-like) Acyl-CoA dehydrogenase C-terminal domain-like 11
SAP domain WGR domain-like 11
Tubulin nucleotide-binding domain-like SWIB/MDM2 domain 11
RING/U-box Cyclophilin-like 11
GAT-like domain S-adenosyl-L-methionine-dependent methyltransferases 11
FAD/NAD(P)-binding domain Acyl-CoA N-acyltransferases (Nat) 11
MurE/MurF N-terminal domain MurD-like peptide ligases, peptide-binding domain 11
ClpP/crotonase Ferredoxin reductase-like, C-terminal NADP-linked domain 11
GYF domain Formin homology 2 domain (FH2 domain) 11
P-loop containing nucleoside triphosphate hydrolases NAD(P)-binding Rossmann-fold domains 11
UDP-Glycosyltransferase/glycogen phosphorylase Galactose-binding domain-like 11
ITPase-like Trypsin-like serine proteases 11
PGBD-like DnaJ/Hsp40 cysteine-rich domain 11
L domain-like alpha/beta-Hydrolases 11
Nucleotide-diphospho-sugar transferases P-loop containing nucleoside triphosphate hydrolases 11
beta and beta-prime subunits of DNA dependent RNA-polymerase beta and beta-prime subunits of DNA dependent RNA-polymerase 11
Starch-binding domain-like Cna protein B-type domain 11
Concanavalin A-like lectins/glucanases BEACH domain 11
Pre-protein crosslinking domain of SecA Helical scaffold and wing domains of SecA 11
Thioredoxin-like Zn-dependent exopeptidases 11
Ribosomal protein S10 NAD(P)-binding Rossmann-fold domains 11
Folate-binding domain Aminomethyltransferase beta-barrel domain 11
Acyl-CoA N-acyltransferases (Nat) Metal cation-transporting ATPase, ATP-binding domain N 11
TGS-like Class II aaRS ABD-related 11
UDP-Glycosyltransferase/glycogen phosphorylase Ribonuclease H-like 11
Phosphoenolpyruvate/pyruvate domain Ypt/Rab-GAP domain of gyp1p 11
RNA-binding domain, RBD DPP6 N-terminal domain-like 11
EF-hand Metallo-dependent hydrolases 11
S-adenosyl-L-methionine-dependent methyltransferases Putative methyltransferase TM0872, insert domain 11
Carbamate kinase-like Carbamate kinase-like 11
P-loop containing nucleoside triphosphate hydrolases Glucocorticoid receptor-like (DNA-binding domain) 11
ACP-like Trimeric LpxA-like enzymes 11
Ankyrin repeat DHS-like NAD/FAD-binding domain 11
Thioredoxin-like LuxS/MPP-like metallohydrolase 11
Calcium-dependent phosphotriesterase Activating enzymes of the ubiquitin-like proteins 11
UBC-like UBA-like 11
R3H domain P-loop containing nucleoside triphosphate hydrolases 11
"Winged helix" DNA-binding domain HRDC-like 11
Ribosome recycling factor, RRF MFS general substrate transporter 11
Retrovirus zinc finger-like domains HCP-like 11
TPR-like RNA-binding domain, RBD 11
DHS-like NAD/FAD-binding domain Homeodomain-like 11
Translation proteins SH3-like domain RCC1/BLIP-II 11
FKBP-like Triger factor/SurA peptide-binding domain-like 11
At5g01610-like S-adenosyl-L-methionine-dependent methyltransferases 11
Homeodomain-like Thioredoxin-like 11
MurE/MurF N-terminal domain MurD-like peptide ligases, catalytic domain 11
Ribosomal protein S5 domain 2-like Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 11
HMA, heavy metal-associated domain Cu,Zn superoxide dismutase-like 11
Formin homology 2 domain (FH2 domain) P-loop containing nucleoside triphosphate hydrolases 11
ARM repeat Nucleotidylyl transferase 11
FAD/NAD-linked reductases, dimerisation (C-terminal) domain FAD/NAD-linked reductases, dimerisation (C-terminal) domain 11
C2 domain (Calcium/lipid-binding domain, CaLB) Protein kinase-like (PK-like) 11
HSP20-like chaperones UDP-Glycosyltransferase/glycogen phosphorylase 11
Chaperone J-domain RNA-binding domain, RBD 11
"Winged helix" DNA-binding domain Sec63 N-terminal domain-like 11
Dihydrofolate reductase-like YbiA-like 11
FAD/NAD(P)-binding domain ACP-like 11
Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases 11
Metallo-dependent hydrolases Metallo-dependent hydrolases 11
Fe,Mn superoxide dismutase (SOD), N-terminal domain Fe,Mn superoxide dismutase (SOD), N-terminal domain 11
Thiolase-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Cyclophilin-like Clc chloride channel 11
Cullin repeat-like Chaperone J-domain 11
GYF domain F-box domain 11
Triosephosphate isomerase (TIM) alpha/beta-Hydrolases 11
Tryptophan synthase beta subunit-like PLP-dependent enzymes Nucleotide-diphospho-sugar transferases 11
HD-domain/PDEase-like EF-hand 11
Mitochondrial carrier RNA-binding domain, RBD 11
Rudiment single hybrid motif N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) 11
Soluble quinoprotein glucose dehydrogenase Quinoprotein alcohol dehydrogenase-like 11
Enolase N-terminal domain-like alpha/beta-Hydrolases 11
eIF4e-like Nucleotide-diphospho-sugar transferases 11
Formin homology 2 domain (FH2 domain) F-box domain 11
Six-hairpin glycosidases AbfB domain 11
AlbA-like Prefoldin 11
Metallo-dependent hydrolases Glutamine synthetase, N-terminal domain 11
YjeF N-terminal domain-like FMN-binding split barrel 11
TSP9-like Phosphofructokinase 11
L9 N-domain-like ClpP/crotonase 11
Cysteine proteinases Homeodomain-like 11
Macro domain-like Macro domain-like 11
t-snare proteins t-snare proteins 11
Ubiquitin-like Protein kinase-like (PK-like) 11
Release factor Cysteine proteinases 11
NAD(P)-linked oxidoreductase Kelch motif 11
F-box domain SET domain 11
LuxS/MPP-like metallohydrolase PLP-dependent transferases 11
PurM N-terminal domain-like PurM N-terminal domain-like 11
Glucocorticoid receptor-like (DNA-binding domain) BRCT domain 11
RNA-binding domain, RBD Nudix 11
SAICAR synthase-like WD40 repeat-like 11
Translation proteins SH3-like domain Translation proteins SH3-like domain 11
Zinc beta-ribbon Ribonuclease H-like 11
SAP domain Arp2/3 complex subunits 11
Metallo-hydrolase/oxidoreductase ATP-dependent DNA ligase DNA-binding domain 11
FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) Protein kinase-like (PK-like) 11
ARM repeat BEACH domain 11
Protein kinase-like (PK-like) Class II aaRS ABD-related 11
Glutamine synthetase/guanido kinase GHMP Kinase, C-terminal domain 11
Galactose mutarotase-like Galactose-binding domain-like 11
Hypothetical protein c14orf129, hspc210 TPR-like 11
Histone-fold SNARE fusion complex 11
Translation initiation factor IF3, N-terminal domain Translation initiation factor IF3, C-terminal domain 11
Formin homology 2 domain (FH2 domain) SET domain 11
Tricorn protease N-terminal domain Tricorn protease N-terminal domain 11
Starch-binding domain-like Carboxypeptidase regulatory domain-like 11
Urease, beta-subunit Metallo-dependent hydrolases 11
PUA domain-like SWIB/MDM2 domain 11
Ribokinase-like Thiamin phosphate synthase 11
Carbonic anhydrase Carbonic anhydrase 11
RNI-like Galactose-binding domain-like 11
Cullin repeat-like NAD-binding domain of HMG-CoA reductase 11
P-domain of calnexin/calreticulin 14-3-3 protein 11
YVTN repeat-like/Quinoprotein amine dehydrogenase WD40 repeat-like 11
ARID-like Clavaminate synthase-like 11
C2 domain (Calcium/lipid-binding domain, CaLB) Ribulose-phoshate binding barrel 11
Acid phosphatase/Vanadium-dependent haloperoxidase ENTH/VHS domain 11
alpha-helical ferredoxin Nucleotide-binding domain 11
ARM repeat FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) 11
Nucleotidylyl transferase An anticodon-binding domain of class I aminoacyl-tRNA synthetases 11
P-loop containing nucleoside triphosphate hydrolases CHY zinc finger-like 11
Tudor/PWWP/MBT SET domain 11
PRC-barrel domain Nucleotide-diphospho-sugar transferases 11
Cdc48 domain 2-like Cdc48 domain 2-like 11
alpha/beta-Hydrolases NHL repeat 11
Phosphoglycerate mutase-like Phosphoglycerate mutase-like 11
alpha/beta-Hydrolases Six-hairpin glycosidases 11
DHS-like NAD/FAD-binding domain Cysteine proteinases 11
Tudor/PWWP/MBT RNA-binding domain, RBD 11
Protein kinase-like (PK-like) Class II aaRS and biotin synthetases 11
RCC1/BLIP-II P-loop containing nucleoside triphosphate hydrolases 11
Adenine nucleotide alpha hydrolases-like YjgF-like 11
UBC-like ENTH/VHS domain 11
ARID-like HMG-box 11
Homeodomain-like EF-hand 11
PH domain-like (Phosphotyrosine protein) phosphatases II 11
Starch-binding domain-like Starch-binding domain-like 11
vWA-like Cysteine-rich domain 11
FGAM synthase PurL, linker domain Class I glutamine amidotransferase-like 11
Cysteine proteinases Nucleotide-diphospho-sugar transferases 11
P-loop containing nucleoside triphosphate hydrolases D-aminoacid aminotransferase-like PLP-dependent enzymes 11
alpha-D-mannose-specific plant lectins alpha-D-mannose-specific plant lectins 11
RNA-binding domain, RBD Activating enzymes of the ubiquitin-like proteins 11
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 11
PDZ domain-like TPR-like 11
Pre-PUA domain PUA domain-like 11
Protein kinase-like (PK-like) Eukaryotic type KH-domain (KH-domain type I) 11
Fucose-specific lectin Fucose-specific lectin 11
Ribonuclease H-like Metalloproteases ("zincins"), catalytic domain 11
CAD & PB1 domains Metallo-dependent hydrolases 11
UROD/MetE-like Cysteine proteinases 11
FAD/NAD(P)-binding domain Nucleotide-binding domain 11
Protein kinase-like (PK-like) CHY zinc finger-like 11
SPOC domain-like Arp2/3 complex subunits 11
GAT-like domain Ribonuclease PH domain 2-like 11
NAD(P)-binding Rossmann-fold domains Tubulin nucleotide-binding domain-like 11
PurS-like PurM C-terminal domain-like 11
Chorismate mutase II Pseudouridine synthase 11
(Trans)glycosidases (Trans)glycosidases 11
RNA-binding domain, RBD Clavaminate synthase-like 11
Cysteine proteinases RCC1/BLIP-II 11
Putative isomerase YbhE DNase I-like 11
BAR/IMD domain-like Actin-like ATPase domain 11
Protein kinase-like (PK-like) Cyclin-like 11
Glutamine synthetase/guanido kinase GatB/YqeY motif 11
L domain-like FAH 11
Acetyl-CoA synthetase-like Trimeric LpxA-like enzymes 11
14-3-3 protein NAD(P)-binding Rossmann-fold domains 11
6-phosphogluconate dehydrogenase C-terminal domain-like PHL pollen allergen 11
Nucleotidylyl transferase Alpha-L RNA-binding motif 11
Aspartate/ornithine carbamoyltransferase P-domain of calnexin/calreticulin 11
Carbamate kinase-like Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 11
FYVE/PHD zinc finger Transducin (alpha subunit), insertion domain 11
Riboflavin synthase domain-like RNA-binding domain, RBD 11
beta-beta-alpha zinc fingers Formin homology 2 domain (FH2 domain) 11
Single hybrid motif Protein kinase-like (PK-like) 11
Translation proteins SH3-like domain Ribosomal protein S19 11
Fe-S cluster assembly (FSCA) domain-like P-loop containing nucleoside triphosphate hydrolases 11
Protein kinase-like (PK-like) PP2C-like 11
Protein kinase-like (PK-like) Acyl-CoA dehydrogenase NM domain-like 11
LeuD/IlvD-like RCC1/BLIP-II 11
C2 domain (Calcium/lipid-binding domain, CaLB) Expressed protein At2g23090/F21P24.15 11
Phosphoenolpyruvate/pyruvate domain E set domains 11
SAICAR synthase-like CRAL/TRIO domain 11
PAZ domain PAZ domain 11
Phosphoglycerate kinase Phosphoglycerate kinase 11
Riboflavin synthase domain-like ARM repeat 11
Cysteine-rich domain NAD kinase/diacylglycerol kinase-like 11
HisI-like all-alpha NTP pyrophosphatases 11
SAM/Pointed domain Metallo-hydrolase/oxidoreductase 11
Protein kinase-like (PK-like) FAH 11
WD40 repeat-like Saposin 11
P-loop containing nucleoside triphosphate hydrolases Ribosomal protein L22 11
Toll/Interleukin receptor TIR domain P-loop containing nucleoside triphosphate hydrolases 11
Substrate-binding domain of HMG-CoA reductase Chaperone J-domain 11
Pentein Pentein 11
ClpP/crotonase P-loop containing nucleoside triphosphate hydrolases 11
Cytochrome P450 N-terminal nucleophile aminohydrolases (Ntn hydrolases) 11
eIF1-like RNA-binding domain, RBD 11
PEP carboxykinase N-terminal domain Plant invertase/pectin methylesterase inhibitor 11
Cysteine proteinases Ribosome recycling factor, RRF 11
P-loop containing nucleoside triphosphate hydrolases DNA-binding domain 11
Transcription factor IIA (TFIIA), beta-barrel domain FAD/NAD(P)-binding domain 11
Cytidine deaminase-like Cytidine deaminase-like 11
FMN-linked oxidoreductases Nucleotide-binding domain 11
Cyclophilin-like Retrovirus zinc finger-like domains 11
ARM repeat Concanavalin A-like lectins/glucanases 11
Nucleotidyltransferase ACT-like 11
Radical SAM enzymes YhbY-like 11
PurM N-terminal domain-like Class I glutamine amidotransferase-like 11
Phosphoenolpyruvate/pyruvate domain Ankyrin repeat 11
WD40 repeat-like CRAL/TRIO domain 11
Sigma2 domain of RNA polymerase sigma factors Tubulin nucleotide-binding domain-like 11
SBT domain SBT domain 11
Soluble quinoprotein glucose dehydrogenase C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase 11
BRCT domain post-AAA+ oligomerization domain-like 11
Trigger factor ribosome-binding domain FKBP-like 11
Trimeric LpxA-like enzymes Trimeric LpxA-like enzymes 11
Clavaminate synthase-like Glutamine synthetase, N-terminal domain 11
Nucleic acid-binding proteins C2 domain (Calcium/lipid-binding domain, CaLB) 11
TGS-like Class II aaRS and biotin synthetases 11
NAC domain ClpP/crotonase 11
cAMP-binding domain-like Thioesterase/thiol ester dehydrase-isomerase 11
DNA repair protein MutS, domain I P-loop containing nucleoside triphosphate hydrolases 11
Metallo-hydrolase/oxidoreductase Metallo-hydrolase/oxidoreductase 11
Histone-fold SNARE-like 11
CheY-like Cdc48 domain 2-like 11
Ribosomal protein S19 Ribosomal protein S19 11
TGS-like ACT-like 11
Phosphofructokinase 14-3-3 protein 11
Actin-like ATPase domain RNA-binding domain, RBD 11
Histone-fold Histone-fold 11
Nucleotidyltransferase Tubulin nucleotide-binding domain-like 11
Ubiquitin-like P-loop containing nucleoside triphosphate hydrolases 11
Acetyl-CoA synthetase-like Heme-dependent catalase-like 11
ARM repeat PH domain-like 11
Protein kinase-like (PK-like) SRF-like 11
Cytochrome P450 DNase I-like 11
Acyl-CoA binding protein Ankyrin repeat 11
14-3-3 protein Triosephosphate isomerase (TIM) 11
FAD/NAD(P)-binding domain Nitrous oxide reductase, N-terminal domain 11
"Winged helix" DNA-binding domain E set domains 11
FMN-dependent nitroreductase-like FMN-dependent nitroreductase-like 11
Concanavalin A-like lectins/glucanases NAD(P)-binding Rossmann-fold domains 11

Jump to [ Top of page · Add/remove domain pairs · Add/remove genomes · Domain combination pairs ]