SUPERFAMILY 1.75 HMM library and genome assignments server

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Sequences with adjacent and non-adjacent Phospholipase D/nuclease and Phospholipase D/nuclease domains in all archaea

Domain architectures containing:

Phospholipase D/nuclease
Phospholipase D/nuclease

domains in any order and any position.

Domain pairs in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain pair in that group of genomes.

Groups of genomes may be slower than individual genomes.


Domain pair architectures in individual genomes

Different types of domain combinations.

The key to the domain colours is at the bottom of the page.

Genome: Methanomethylovorans hollandica DSM 15978

gi|435850975|ref|YP_007312561.1|


Genome: Methanolobus psychrophilus R15 contains 3 proteins with this domain pair combination.

gi|410669590|ref|YP_006921961.1|

gi|410670126|ref|YP_006922497.1|

gi|410670804|ref|YP_006923175.1|


Genome: Methanoregula formicica Methanoregula formicicum SMSP contains 2 proteins with this domain pair combination.

gi|432332045|ref|YP_007250188.1|

gi|432331072|ref|YP_007249215.1|


Genome: Archaeoglobus sulfaticallidus PM70-1

gi|488600101|ref|YP_007906572.1|


Genome: Candidatus Methanomethylophilus alvus Mx1201 contains 5 proteins with this domain pair combination.

gi|478482292|ref|YP_007712942.1|

gi|478482293|ref|YP_007712943.1|

gi|478482761|ref|YP_007713411.1|

gi|478483001|ref|YP_007713651.1|

gi|478483000|ref|YP_007713650.1|


Genome: Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 contains 3 proteins with this domain pair combination.

gi|511059023|ref|YP_008070908.1|

gi|511059414|ref|YP_008071299.1|

gi|511060394|ref|YP_008072279.1|


Genome: Ferroplasma acidarmanus fer1

gi|518653027|ref|YP_008142547.1|


Genome: Halovivax ruber XH-70 contains 2 proteins with this domain pair combination.

gi|433637935|ref|YP_007283695.1|

gi|433637820|ref|YP_007283580.1|


Genome: Natrinema pellirubrum DSM 15624 contains 2 proteins with this domain pair combination.

gi|433591980|ref|YP_007281476.1|

gi|433590546|ref|YP_007280042.1|


Genome: Natronococcus occultus SP4

gi|435846232|ref|YP_007308482.1|


Genome: Natronobacterium gregoryi SP2

gi|429190596|ref|YP_007176274.1|


Genome: Haloquadratum walsbyi C23 contains 2 proteins with this domain pair combination.

gi|385802982|ref|YP_005839382.1|

gi|385803139|ref|YP_005839539.1|


Genome: Halorhabdus tiamatea SARL4B

gi|529077077|ref|YP_008376080.1|


Genome: Natronomonas moolapensis 8.8.11 contains 2 proteins with this domain pair combination.

gi|452206686|ref|YP_007486808.1|

gi|452208412|ref|YP_007488534.1|


Genome: Haloarcula hispanica N601 contains 2 proteins with this domain pair combination.

gi|564290238|ref|YP_008876528.1|

gi|564288185|ref|YP_008874398.1|


Genome: Methanobacterium sp. SWAN-1

gi|333988422|ref|YP_004521029.1|


Genome: Acidianus hospitalis W1

gi|332796094|ref|YP_004457594.1|


Genome: Vulcanisaeta moutnovskia 768-28

gi|325967529|ref|YP_004243721.1|


Genome: Vulcanisaeta distributa DSM 14429

gi|307595731|ref|YP_003902048.1|


Genome: Pyrobaculum sp. 1860

gi|374328029|ref|YP_005086229.1|


Genome: Pyrobaculum calidifontis JCM 11548

gi|126459399|ref|YP_001055677.1|


Genome: Pyrobaculum arsenaticum DSM 13514

gi|145590567|ref|YP_001152569.1|


Genome: Pyrobaculum oguniense TE7

gi|379005059|ref|YP_005260731.1|


Genome: Thermoproteus neutrophilus V24Sta

gi|171184732|ref|YP_001793651.1|


Genome: Pyrobaculum aerophilum str. IM2

gi|18312489|ref|NP_559156.1|


Genome: Pyrobaculum islandicum DSM 4184

gi|119872796|ref|YP_930803.1|


Genome: Thermoproteus uzoniensis 768-20

gi|327310257|ref|YP_004337154.1|


Genome: Thermoproteus tenax Kra 1

gi|352681909|ref|YP_004892433.1|


Genome: halophilic archaeon DL31

gi|345004445|ref|YP_004807298.1|


Genome: Methanosaeta concilii GP6

gi|330508127|ref|YP_004384555.1|


Genome: Methanosarcina acetivorans C2A

gi|20088980|ref|NP_615055.1|


Genome: Methanosarcina mazei Go1

gi|21227477|ref|NP_633399.1|


Genome: Methanosarcina barkeri str. Fusaro

gi|73668727|ref|YP_304742.1|


Genome: Methanohalophilus mahii DSM 5219

gi|294495425|ref|YP_003541918.1|


Genome: Methanosphaerula palustris E1-9c contains 3 proteins with this domain pair combination.

gi|219853156|ref|YP_002467588.1|

gi|219852552|ref|YP_002466984.1|

gi|219852553|ref|YP_002466985.1|


Genome: Methanoregula boonei 6A8 contains 2 proteins with this domain pair combination.

gi|154150038|ref|YP_001403656.1|

gi|154150997|ref|YP_001404615.1|


Genome: Methanospirillum hungatei JF-1 contains 4 proteins with this domain pair combination.

gi|88602518|ref|YP_502696.1|

gi|88603592|ref|YP_503770.1|

gi|88602180|ref|YP_502358.1|

gi|88602707|ref|YP_502885.1|


Genome: Methanocorpusculum labreanum Z contains 3 proteins with this domain pair combination.

gi|124485454|ref|YP_001030070.1|

gi|124486406|ref|YP_001031022.1|

gi|124485406|ref|YP_001030022.1|


Genome: Methanoplanus petrolearius DSM 11571 contains 3 proteins with this domain pair combination.

gi|307352333|ref|YP_003893384.1|

gi|307353506|ref|YP_003894557.1|

gi|307353633|ref|YP_003894684.1|


Genome: Methanoculleus bourgensis MS2 contains 2 proteins with this domain pair combination.

gi|397781724|ref|YP_006546197.1|

gi|397781734|ref|YP_006546207.1|


Genome: Methanoculleus marisnigri JR1 contains 2 proteins with this domain pair combination.

gi|126180379|ref|YP_001048344.1|

gi|126180386|ref|YP_001048351.1|


Genome: Thermoplasmatales archaeon BRNA1 contains 2 proteins with this domain pair combination.

gi|474934327|ref|YP_007687909.1|

gi|474934248|ref|YP_007687830.1|


Genome: Thermoplasma volcanium GSS1

gi|13541644|ref|NP_111332.1|


Genome: Thermoplasma acidophilum DSM 1728

gi|16081814|ref|NP_394206.1|


Genome: Picrophilus torridus DSM 9790

gi|48478064|ref|YP_023770.1|


Genome: Salinarchaeum sp. Harcht-Bsk1

gi|510880099|ref|YP_008052767.1|


Genome: Halopiger xanaduensis SH-6 contains 2 proteins with this domain pair combination.

gi|336254257|ref|YP_004597364.1|

gi|336252888|ref|YP_004595995.1|


Genome: Methanobacterium sp. AL-21

gi|325959318|ref|YP_004290784.1|


Genome: Haloterrigena turkmenica DSM 5511 contains 2 proteins with this domain pair combination.

gi|284164786|ref|YP_003403065.1|

gi|284166975|ref|YP_003405254.1|


Genome: Natrinema sp. J7-2 contains 2 proteins with this domain pair combination.

gi|397774888|ref|YP_006542434.1|

gi|397773236|ref|YP_006540782.1|


Genome: Natrialba magadii ATCC 43099

gi|289582084|ref|YP_003480550.1|


Genome: Halorubrum lacusprofundi ATCC 49239

gi|222480811|ref|YP_002567048.1|


Genome: Haloquadratum walsbyi DSM 16790 contains 2 proteins with this domain pair combination.

gi|110667542|ref|YP_657353.1|

gi|110667698|ref|YP_657509.1|


Genome: Halogeometricum borinquense DSM 11551 contains 2 proteins with this domain pair combination.

gi|313126936|ref|YP_004037206.1|

gi|313126314|ref|YP_004036584.1|


Genome: Haloferax mediterranei ATCC 33500 contains 2 proteins with this domain pair combination.

gi|389846483|ref|YP_006348722.1|

gi|389847194|ref|YP_006349433.1|


Genome: Haloferax volcanii DS2 contains 3 proteins with this domain pair combination.

gi|292655179|ref|YP_003535076.1|

gi|292656717|ref|YP_003536614.1|

gi|292655799|ref|YP_003535696.1|


Genome: Halomicrobium mukohataei DSM 12286 contains 2 proteins with this domain pair combination.

gi|257387953|ref|YP_003177726.1|

gi|257387843|ref|YP_003177616.1|


Genome: Halorhabdus utahensis DSM 12940 contains 2 proteins with this domain pair combination.

gi|257051803|ref|YP_003129636.1|

gi|257053686|ref|YP_003131519.1|


Genome: Natronomonas pharaonis DSM 2160

gi|76802253|ref|YP_327261.1|


Genome: Haloarcula hispanica ATCC 33960 contains 2 proteins with this domain pair combination.

gi|344212286|ref|YP_004796606.1|

gi|344210192|ref|YP_004786368.1|


Genome: Haloarcula marismortui ATCC 43049 contains 2 proteins with this domain pair combination.

gi|55378224|ref|YP_136074.1|

gi|55376853|ref|YP_134704.1|


Genome: Halalkalicoccus jeotgali B3

gi|300711522|ref|YP_003737336.1|


Genome: Halobacterium salinarum R1

gi|169235666|ref|YP_001688866.1|


Genome: Methanosphaera stadtmanae DSM 3091

gi|84489529|ref|YP_447761.1|


Genome: Methanobrevibacter sp. AbM4

gi|509155509|ref|YP_008075749.1|


Genome: Methanobrevibacter smithii ATCC 35061

gi|148643484|ref|YP_001273997.1|


Genome: Complete genome sequence of Methanobacterium sp. Mb1

gi|566002612|ref|YP_008915452.1|


Genome: Aciduliprofundum sp. MAR08-339 contains 2 proteins with this domain pair combination.

gi|432328816|ref|YP_007246960.1|

gi|432328658|ref|YP_007246802.1|


Genome: Aciduliprofundum boonei T469 contains 2 proteins with this domain pair combination.

gi|289595805|ref|YP_003482501.1|

gi|289595985|ref|YP_003482681.1|