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Clostridium beijerinckii NCIMB 8052 superfamily assignments

Taxonomy
Taxonomy browser entry

Bacteria; Terrabacteria group; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; Clostridium beijerinckii; Clostridium beijerinckii NCIMB 8052

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Fasta format sequences
Domain assignments


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Assignment statistics

Sequences: 5020 total
3573 (71 %) with assignment
315 average length
64 % amino acid coverage
Domains: 5316 total
730 unique superfamilies
544 unique families
286 average length
7.3 average superfamily size
86 % formed by duplication
Domain combinations: 567 domain pairs
1259 unique architectures

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Superfamily assignments

Domains

Proteins

Architectures

Families

SCOP link

Superfamilies

338 300 88 8 SCOP 52540 P-loop containing nucleoside triphosphate hydrolases
181 180 39 2 SCOP 46785 "Winged helix" DNA-binding domain
154 120 26 0 SCOP 46689 Homeodomain-like
105 104 19 6 SCOP 51735 NAD(P)-binding Rossmann-fold domains
102 101 37 2 SCOP 55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
95 93 28 1 SCOP 52172 CheY-like
73 66 25 1 SCOP 69360 Cell wall binding repeat
70 70 27 0 SCOP 47384 Homodimeric domain of signal transducing histidine kinase
69 69 8 1 SCOP 53850 Periplasmic binding protein-like II
68 61 12 1 SCOP 58104 Methyl-accepting chemotaxis protein (MCP) signaling domain
58 35 13 5 SCOP 53067 Actin-like ATPase domain
58 58 5 1 SCOP 53822 Periplasmic binding protein-like I
56 56 4 1 SCOP 161098 MetI-like
56 56 13 9 SCOP 53335 S-adenosyl-L-methionine-dependent methyltransferases
55 55 23 8 SCOP 51445 (Trans)glycosidases
54 54 4 3 SCOP 55729 Acyl-CoA N-acyltransferases (Nat)
54 37 26 0 SCOP 55785 PYP-like sensor domain (PAS domain)
51 51 9 0 SCOP 47413 lambda repressor-like DNA-binding domains
50 49 20 0 SCOP 54862 4Fe-4S ferredoxins
47 47 5 3 SCOP 53383 PLP-dependent transferases
43 34 22 3 SCOP 50249 Nucleic acid-binding proteins
43 43 2 0 SCOP 103473 MFS general substrate transporter
42 42 8 2 SCOP 102114 Radical SAM enzymes
41 41 8 3 SCOP 56784 HAD-like
39 38 8 1 SCOP 52218 Flavoproteins
37 35 10 1 SCOP 109604 HD-domain/PDEase-like
37 37 7 1 SCOP 46894 C-terminal effector domain of the bipartite response regulators
37 23 13 1 SCOP 63520 PTS-regulatory domain, PRD
36 23 8 6 SCOP 52518 Thiamin diphosphate-binding fold (THDP-binding)
35 32 18 3 SCOP 51905 FAD/NAD(P)-binding domain
34 32 12 4 SCOP 53448 Nucleotide-diphospho-sugar transferases
34 30 6 0 SCOP 88659 Sigma3 and sigma4 domains of RNA polymerase sigma factors
30 30 6 6 SCOP 51569 Aldolase
30 24 5 6 SCOP 100950 NagB/RpiA/CoA transferase-like
30 30 11 0 SCOP 158472 HAMP domain-like
29 29 3 2 SCOP 53474 alpha/beta-Hydrolases
29 29 3 3 SCOP 53697 SIS domain
29 29 5 2 SCOP 56281 Metallo-hydrolase/oxidoreductase
28 28 5 1 SCOP 88946 Sigma2 domain of RNA polymerase sigma factors
27 26 6 1 SCOP 52833 Thioredoxin-like
26 24 17 6 SCOP 54211 Ribosomal protein S5 domain 2-like
26 25 3 3 SCOP 53756 UDP-Glycosyltransferase/glycogen phosphorylase
26 26 5 4 SCOP 51182 RmlC-like cupins
25 20 13 0 SCOP 48452 TPR-like
25 25 3 1 SCOP 55469 FMN-dependent nitroreductase-like
25 25 9 1 SCOP 52794 PTS system IIB component-like
24 24 15 1 SCOP 55073 Nucleotide cyclase
24 24 9 1 SCOP 53062 PTS system fructose IIA component-like
23 23 9 2 SCOP 53187 Zn-dependent exopeptidases
23 14 8 0 SCOP 111369 HlyD-like secretion proteins
22 22 9 2 SCOP 52317 Class I glutamine amidotransferase-like
22 22 11 5 SCOP 52402 Adenine nucleotide alpha hydrolases-like
21 21 8 0 SCOP 46955 Putative DNA-binding domain
21 13 5 0 SCOP 103481 Multidrug resistance efflux transporter EmrE
21 21 2 1 SCOP 48179 6-phosphogluconate dehydrogenase C-terminal domain-like
20 20 7 3 SCOP 53098 Ribonuclease H-like
19 17 7 0 SCOP 56300 Metallo-dependent phosphatases
19 15 10 0 SCOP 55021 ACT-like
19 18 9 0 SCOP 103190 Sensory domain-like
18 18 14 3 SCOP 52374 Nucleotidylyl transferase
18 18 3 3 SCOP 51161 Trimeric LpxA-like enzymes
17 15 9 2 SCOP 56059 Glutathione synthetase ATP-binding domain-like
17 17 10 2 SCOP 55681 Class II aaRS and biotin synthetases
17 17 3 2 SCOP 56796 Dehydroquinate synthase-like
17 17 3 2 SCOP 53807 "Helical backbone" metal receptor
17 17 5 0 SCOP 55604 Glucose permease domain IIB
16 16 6 6 SCOP 51556 Metallo-dependent hydrolases
16 16 6 0 SCOP 54001 Cysteine proteinases
16 16 2 3 SCOP 88713 Glycoside hydrolase/deacetylase
16 15 10 0 SCOP 46548 alpha-helical ferredoxin
16 9 5 1 SCOP 82866 Multidrug efflux transporter AcrB transmembrane domain
15 13 5 2 SCOP 53271 PRTase-like
15 14 11 2 SCOP 50447 Translation proteins
15 15 10 1 SCOP 54631 CBS-domain pair
15 15 4 0 SCOP 56349 DNA breaking-rejoining enzymes
15 15 8 1 SCOP 55804 Phoshotransferase/anion transport protein
15 15 4 0 SCOP 51215 Regulatory protein AraC
15 15 8 1 SCOP 51011 Glycosyl hydrolase domain
15 15 4 2 SCOP 55347 Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
15 6 3 0 SCOP 82693 Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
14 14 2 3 SCOP 53613 Ribokinase-like
14 14 3 2 SCOP 47240 Ferritin-like
14 14 2 2 SCOP 53720 ALDH-like
14 6 5 1 SCOP 52777 CoA-dependent acyltransferases
14 14 2 1 SCOP 90123 ABC transporter transmembrane region
14 8 5 0 SCOP 49373 Invasin/intimin cell-adhesion fragments
14 14 2 2 SCOP 56327 LDH C-terminal domain-like
13 13 6 1 SCOP 56112 Protein kinase-like (PK-like)
13 13 2 4 SCOP 51366 Ribulose-phoshate binding barrel
13 13 5 1 SCOP 51395 FMN-linked oxidoreductases
13 13 9 1 SCOP 56601 beta-lactamase/transpeptidase-like
13 13 2 1 SCOP 54909 Dimeric alpha+beta barrel
13 11 4 0 SCOP 51338 Composite domain of metallo-dependent hydrolases
13 8 7 1 SCOP 54980 EF-G C-terminal domain-like
12 12 2 4 SCOP 51658 Xylose isomerase-like
12 12 4 1 SCOP 55174 Alpha-L RNA-binding motif
12 12 3 1 SCOP 51261 Duplicated hybrid motif
12 10 3 0 SCOP 54637 Thioesterase/thiol ester dehydrase-isomerase
12 11 9 2 SCOP 55781 GAF domain-like
12 12 6 3 SCOP 52467 DHS-like NAD/FAD-binding domain
12 12 7 0 SCOP 57802 Rubredoxin-like
12 12 5 2 SCOP 52922 TK C-terminal domain-like
12 4 2 0 SCOP 53738 Phosphoglucomutase, first 3 domains
12 6 3 0 SCOP 82714 Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
11 8 4 0 SCOP 47336 ACP-like
11 10 3 0 SCOP 55811 Nudix
11 11 2 4 SCOP 52096 ClpP/crotonase
11 11 1 1 SCOP 50475 FMN-binding split barrel
11 8 2 1 SCOP 56801 Acetyl-CoA synthetase-like
11 10 6 3 SCOP 74650 Galactose mutarotase-like
11 9 6 0 SCOP 55008 HMA, heavy metal-associated domain
11 11 4 1 SCOP 50341 CheW-like
11 8 4 2 SCOP 53901 Thiolase-like
11 11 5 0 SCOP 55136 Probable bacterial effector-binding domain
11 11 1 1 SCOP 48498 Tetracyclin repressor-like, C-terminal domain
11 11 3 0 SCOP 69279 Phage tail proteins
11 10 4 1 SCOP 63380 Riboflavin synthase domain-like
10 10 6 0 SCOP 141868 EAL domain-like
10 10 1 0 SCOP 54593 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
10 9 8 1 SCOP 47781 RuvA domain 2-like
10 10 6 1 SCOP 56176 FAD-binding/transporter-associated domain-like
10 10 2 1 SCOP 52728 PTS IIb component
10 10 1 0 SCOP 46973 Enzyme IIa from lactose specific PTS, IIa-lac
10 8 4 1 SCOP 56014 Nitrite and sulphite reductase 4Fe-4S domain-like
10 7 4 0 SCOP 51971 Nucleotide-binding domain
10 10 6 1 SCOP 81665 Calcium ATPase, transmembrane domain M
10 10 6 0 SCOP 81653 Calcium ATPase, transduction domain A
9 9 4 3 SCOP 55120 Pseudouridine synthase
9 9 2 2 SCOP 50129 GroES-like
9 9 5 2 SCOP 49899 Concanavalin A-like lectins/glucanases
9 9 3 5 SCOP 51998 PFL-like glycyl radical enzymes
9 9 4 2 SCOP 81301 Nucleotidyltransferase
9 9 3 1 SCOP 89550 PHP domain-like
9 7 3 0 SCOP 56954 Outer membrane efflux proteins (OEP)
9 9 6 2 SCOP 53955 Lysozyme-like
9 9 1 0 SCOP 64288 Chorismate lyase-like
9 9 1 0 SCOP 48008 GntR ligand-binding domain-like
9 9 3 0 SCOP 52343 Ferredoxin reductase-like, C-terminal NADP-linked domain
9 9 3 1 SCOP 52743 Subtilisin-like
9 7 3 0 SCOP 55124 Nitrite/Sulfite reductase N-terminal domain-like
8 8 4 3 SCOP 53927 Cytidine deaminase-like
8 8 3 1 SCOP 55486 Metalloproteases ("zincins"), catalytic domain
8 8 1 1 SCOP 53254 Phosphoglycerate mutase-like
8 8 3 1 SCOP 51430 NAD(P)-linked oxidoreductase
8 8 6 0 SCOP 47226 Histidine-containing phosphotransfer domain, HPT domain
8 8 4 0 SCOP 141571 Pentapeptide repeat-like
8 6 5 1 SCOP 143414 CcmK-like
8 8 1 0 SCOP 51206 cAMP-binding domain-like
8 8 1 2 SCOP 56821 Prismane protein-like
8 8 4 2 SCOP 75005 Arabinanase/levansucrase/invertase
8 7 7 1 SCOP 47323 Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
8 8 1 0 SCOP 47188 Hemerythrin-like
8 8 5 2 SCOP 53623 MurD-like peptide ligases, catalytic domain
7 7 4 1 SCOP 53790 Tetrapyrrole methylase
7 7 2 0 SCOP 89447 AbrB/MazE/MraZ-like
7 7 3 1 SCOP 53686 Tryptophan synthase beta subunit-like PLP-dependent enzymes
7 7 5 4 SCOP 51621 Phosphoenolpyruvate/pyruvate domain
7 7 1 1 SCOP 81345 ABC transporter involved in vitamin B12 uptake, BtuC
7 7 5 0 SCOP 51306 LexA/Signal peptidase
7 7 1 0 SCOP 52283 Formate/glycerate dehydrogenase catalytic domain-like
7 6 2 0 SCOP 101386 all-alpha NTP pyrophosphatases
7 4 4 0 SCOP 48295 TrpR-like
7 4 2 1 SCOP 63411 LuxS/MPP-like metallohydrolase
7 5 5 1 SCOP 56024 Phospholipase D/nuclease
7 7 3 1 SCOP 141523 L,D-transpeptidase catalytic domain-like
7 7 4 1 SCOP 53244 MurD-like peptide ligases, peptide-binding domain
7 7 3 1 SCOP 52009 Phosphohistidine domain
7 6 4 1 SCOP 52440 PreATP-grasp domain
7 5 5 0 SCOP 47090 PGBD-like
6 6 4 2 SCOP 50104 Translation proteins SH3-like domain
6 6 4 1 SCOP 55920 Creatinase/aminopeptidase
6 6 3 4 SCOP 75217 alpha/beta knot
6 6 2 3 SCOP 53633 Carbamate kinase-like
6 5 3 1 SCOP 51412 Inosine monophosphate dehydrogenase (IMPDH)
6 6 5 2 SCOP 56235 N-terminal nucleophile aminohydrolases (Ntn hydrolases)
6 6 4 2 SCOP 50891 Cyclophilin-like
6 6 4 3 SCOP 53649 Alkaline phosphatase-like
6 6 3 1 SCOP 52266 SGNH hydrolase
6 6 3 1 SCOP 52954 Class II aaRS ABD-related
6 6 3 0 SCOP 103642 Sec-C motif
6 5 3 0 SCOP 53300 vWA-like
6 6 2 1 SCOP 56645 Acyl-CoA dehydrogenase NM domain-like
6 6 5 1 SCOP 46565 Chaperone J-domain
6 5 4 0 SCOP 50346 PRC-barrel domain
6 6 2 1 SCOP 47203 Acyl-CoA dehydrogenase C-terminal domain-like
6 2 1 1 SCOP 55973 S-adenosylmethionine synthetase
6 3 1 1 SCOP 53681 Aspartate/glutamate racemase
6 5 3 0 SCOP 158499 DnaD domain-like
6 4 4 0 SCOP 51055 Carbohydrate binding domain
6 6 5 1 SCOP 53920 Fe-only hydrogenase
6 6 2 0 SCOP 52279 Beta-D-glucan exohydrolase, C-terminal domain
6 5 3 0 SCOP 160240 Cation efflux protein cytoplasmic domain-like
6 6 1 1 SCOP 55031 Bacterial exopeptidase dimerisation domain
5 5 4 2 SCOP 64182 DHH phosphoesterases
5 3 2 0 SCOP 56214 4'-phosphopantetheinyl transferase
5 5 1 3 SCOP 53659 Isocitrate/Isopropylmalate dehydrogenase-like
5 5 1 2 SCOP 82549 DAK1/DegV-like
5 5 5 0 SCOP 52980 Restriction endonuclease-like
5 5 1 1 SCOP 48557 L-aspartase-like
5 5 5 0 SCOP 54292 2Fe-2S ferredoxin-like
5 5 3 2 SCOP 51419 PLP-binding barrel
5 5 3 2 SCOP 56672 DNA/RNA polymerases
5 5 4 0 SCOP 54534 FKBP-like
5 5 1 1 SCOP 52499 Isochorismatase-like hydrolases
5 5 3 0 SCOP 52058 L domain-like
5 5 5 3 SCOP 55931 Glutamine synthetase/guanido kinase
5 5 1 1 SCOP 69118 AhpD-like
5 5 3 1 SCOP 52016 LeuD/IlvD-like
5 5 4 0 SCOP 51230 Single hybrid motif
5 5 3 0 SCOP 161111 Cation efflux protein transmembrane domain-like
5 5 1 0 SCOP 54913 GlnB-like
5 5 4 0 SCOP 88697 PUA domain-like
5 4 4 1 SCOP 54814 Prokaryotic type KH domain (KH-domain type II)
5 5 2 1 SCOP 143631 ApbE-like
5 5 4 1 SCOP 103039 CheC-like
5 5 4 1 SCOP 55186 ThrRS/AlaRS common domain
5 5 5 0 SCOP 50156 PDZ domain-like
5 3 3 0 SCOP 158430 Bacillus cereus metalloprotein-like
5 4 2 1 SCOP 56042 PurM C-terminal domain-like
5 5 1 0 SCOP 81660 Metal cation-transporting ATPase, ATP-binding domain N
5 4 2 1 SCOP 55326 PurM N-terminal domain-like
5 3 2 0 SCOP 54184 Penicillin-binding protein 2x (pbp-2x), c-terminal domain
5 5 4 1 SCOP 56519 Penicillin binding protein dimerisation domain
4 4 1 1 SCOP 53167 Purine and uridine phosphorylases
4 4 3 1 SCOP 81606 PP2C-like
4 4 2 1 SCOP 54197 HIT-like
4 4 2 1 SCOP 89623 Ribose/Galactose isomerase RpiB/AlsB
4 4 2 1 SCOP 64518 Phase 1 flagellin
4 4 3 0 SCOP 48371 ARM repeat
4 4 4 0 SCOP 81296 E set domains
4 4 4 1 SCOP 88723 PIN domain-like
4 4 3 0 SCOP 54427 NTF2-like
4 4 4 1 SCOP 49785 Galactose-binding domain-like
4 4 1 1 SCOP 56752 D-aminoacid aminotransferase-like PLP-dependent enzymes
4 4 2 0 SCOP 56317 Carbon-nitrogen hydrolase
4 4 1 1 SCOP 53639 AraD/HMP-PK domain-like
4 4 4 1 SCOP 48208 Six-hairpin glycosidases
4 4 4 1 SCOP 82282 Homocysteine S-methyltransferase
4 4 2 1 SCOP 52151 FabD/lysophospholipase-like
4 4 2 1 SCOP 55620 Tetrahydrobiopterin biosynthesis enzymes-like
4 4 4 2 SCOP 51717 Dihydropteroate synthetase-like
4 4 4 1 SCOP 50494 Trypsin-like serine proteases
4 4 4 0 SCOP 82771 GIY-YIG endonuclease
4 4 2 0 SCOP 55797 PR-1-like
4 4 4 1 SCOP 53218 Molybdenum cofactor biosynthesis proteins
4 4 2 1 SCOP 50800 PK beta-barrel domain-like
4 4 1 1 SCOP 118215 Proton glutamate symport protein
4 4 2 1 SCOP 53323 Pyruvate-ferredoxin oxidoreductase, PFOR, domain III
4 4 4 1 SCOP 52242 Cobalamin (vitamin B12)-binding domain
4 4 1 1 SCOP 53163 HybD-like
4 4 2 0 SCOP 50331 MOP-like
4 4 2 1 SCOP 51246 Rudiment single hybrid motif
4 4 1 2 SCOP 53223 Aminoacid dehydrogenase-like, N-terminal domain
4 3 2 0 SCOP 82185 Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain
4 4 3 1 SCOP 56719 Type II DNA topoisomerase
4 4 4 1 SCOP 48334 DNA repair protein MutS, domain III
4 4 2 1 SCOP 140990 FtsH protease domain-like
4 4 1 1 SCOP 53671 Aspartate/ornithine carbamoyltransferase
4 4 4 0 SCOP 142984 Nqo1 middle domain-like
4 4 2 2 SCOP 50621 Alanine racemase C-terminal domain-like
4 4 1 0 SCOP 47979 Iron-dependent repressor protein, dimerization domain
4 4 3 0 SCOP 56425 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
4 4 4 0 SCOP 46600 C-terminal UvrC-binding domain of UvrB
4 4 2 0 SCOP 46934 UBA-like
4 4 1 0 SCOP 50151 SacY-like RNA-binding domain
4 4 2 0 SCOP 55957 Phosphoglucomutase, C-terminal domain
4 4 3 1 SCOP 81271 TGS-like
4 4 1 1 SCOP 101821 Aminopeptidase/glucanase lid domain
4 4 1 0 SCOP 143985 L,D-transpeptidase pre-catalytic domain-like
4 4 2 0 SCOP 55052 CheY-binding domain of CheA
3 3 1 1 SCOP 52141 Uracil-DNA glycosylase-like
3 3 1 1 SCOP 56420 Peptide deformylase
3 3 3 0 SCOP 57716 Glucocorticoid receptor-like (DNA-binding domain)
3 3 1 0 SCOP 69593 Glycerol-3-phosphate (1)-acyltransferase
3 3 1 1 SCOP 53784 Phosphofructokinase
3 3 2 1 SCOP 53597 Dihydrofolate reductase-like
3 3 2 1 SCOP 82649 SufE/NifU
3 3 3 0 SCOP 109998 Triger factor/SurA peptide-binding domain-like
3 3 3 0 SCOP 52821 Rhodanese/Cell cycle control phosphatase
3 3 3 2 SCOP 55821 YrdC/RibB
3 3 2 2 SCOP 48150 DNA-glycosylase
3 3 1 1 SCOP 55205 EPT/RTPC-like
3 3 2 0 SCOP 117143 Flagellar hook protein flgE
3 3 1 1 SCOP 55298 YjgF-like
3 3 3 0 SCOP 75169 DsrEFH-like
3 3 2 0 SCOP 55315 L30e-like
3 3 1 0 SCOP 51726 UROD/MetE-like
3 2 2 1 SCOP 54506 Diaminopimelate epimerase-like
3 2 2 0 SCOP 47819 HRDC-like
3 3 2 0 SCOP 110849 ParB/Sulfiredoxin
3 3 1 0 SCOP 55961 Bet v1-like
3 3 3 0 SCOP 81324 Voltage-gated potassium channels
3 3 2 0 SCOP 52091 SpoIIaa-like
3 3 1 1 SCOP 111352 Ammonium transporter
3 2 2 1 SCOP 57783 Zinc beta-ribbon
3 2 2 0 SCOP 49503 Cupredoxins
3 3 2 0 SCOP 49879 SMAD/FHA domain
3 3 2 1 SCOP 53213 LigB-like
3 3 2 0 SCOP 51004 C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
3 3 1 0 SCOP 103088 OmpA-like
3 3 2 1 SCOP 55826 YbaK/ProRS associated domain
3 3 3 2 SCOP 52335 Methylglyoxal synthase-like
3 3 1 0 SCOP 50037 C-terminal domain of transcriptional repressors
3 3 2 0 SCOP 140683 SP0561-like
3 3 1 1 SCOP 51219 TRAP-like
3 3 2 0 SCOP 53146 Nitrogenase accessory factor-like
3 3 1 2 SCOP 51604 Enolase C-terminal domain-like
3 3 2 0 SCOP 82171 DPP6 N-terminal domain-like
3 3 1 1 SCOP 52738 Methylesterase CheB, C-terminal domain
3 3 1 1 SCOP 102198 Putative cyclase
3 3 2 0 SCOP 53092 Creatinase/prolidase N-terminal domain
3 3 2 1 SCOP 50465 EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
3 3 3 1 SCOP 55424 FAD/NAD-linked reductases, dimerisation (C-terminal) domain
3 3 2 0 SCOP 46589 tRNA-binding arm
3 1 1 0 SCOP 55979 DNA clamp
3 3 2 1 SCOP 56712 Prokaryotic type I DNA topoisomerase
3 3 3 0 SCOP 52200 Toll/Interleukin receptor TIR domain
3 3 2 1 SCOP 51690 Nicotinate/Quinolinate PRTase C-terminal domain-like
3 3 2 0 SCOP 55103 FAD-linked oxidases, C-terminal domain
3 3 1 0 SCOP 81923 Double Clp-N motif
3 3 3 0 SCOP 69304 Tricorn protease N-terminal domain
3 3 2 0 SCOP 140500 BAS1536-like
3 3 2 1 SCOP 48019 post-AAA+ oligomerization domain-like
3 2 2 1 SCOP 49265 Fibronectin type III
3 3 3 1 SCOP 56037 PheT/TilS domain
3 3 1 1 SCOP 54826 Enolase N-terminal domain-like
3 3 1 1 SCOP 55060 GHMP Kinase, C-terminal domain
3 2 2 1 SCOP 101904 GyrA/ParC C-terminal domain-like
3 3 1 0 SCOP 63418 MurE/MurF N-terminal domain
3 3 2 0 SCOP 141259 CarD-like
3 3 1 0 SCOP 52413 UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
3 3 3 1 SCOP 50677 ValRS/IleRS/LeuRS editing domain
3 3 2 1 SCOP 53743 FucI/AraA N-terminal and middle domains
3 3 1 1 SCOP 143975 IlvD/EDD N-terminal domain-like
3 3 3 1 SCOP 142019 Nqo1 FMN-binding domain-like
3 3 3 1 SCOP 47644 Methionine synthase domain
2 2 2 0 SCOP 48013 NusB-like
2 2 2 0 SCOP 55594 HPr-like
2 2 1 0 SCOP 57829 Zn-binding ribosomal proteins
2 2 2 1 SCOP 143597 YojJ-like
2 2 1 2 SCOP 111331 NAD kinase/diacylglycerol kinase-like
2 2 1 1 SCOP 53137 Translational machinery components
2 2 1 0 SCOP 143800 L28p-like
2 2 1 1 SCOP 75620 Release factor
2 2 1 1 SCOP 109755 PhoU-like
2 2 1 2 SCOP 64484 beta and beta-prime subunits of DNA dependent RNA-polymerase
2 2 1 1 SCOP 111283 Putative modulator of DNA gyrase, PmbA/TldD
2 2 1 1 SCOP 51283 dUTPase-like
2 2 2 1 SCOP 50715 Ribosomal protein L25-like
2 2 1 2 SCOP 56770 HydA/Nqo6-like
2 2 1 1 SCOP 64005 Undecaprenyl diphosphate synthase
2 2 1 0 SCOP 55229 Cell division protein MinE topological specificity domain
2 2 1 0 SCOP 50685 Barwin-like endoglucanases
2 2 1 1 SCOP 48576 Terpenoid synthases
2 2 2 0 SCOP 49764 HSP20-like chaperones
2 2 2 0 SCOP 50182 Sm-like ribonucleoproteins
2 2 2 1 SCOP 52949 Macro domain-like
2 2 2 0 SCOP 63829 Calcium-dependent phosphotriesterase
2 2 1 0 SCOP 48317 Acid phosphatase/Vanadium-dependent haloperoxidase
2 2 2 1 SCOP 53328 Formyltransferase
2 2 1 1 SCOP 56322 ADC synthase
2 2 1 0 SCOP 48403 Ankyrin repeat
2 2 1 0 SCOP 55144 LigT-like
2 2 1 0 SCOP 69572 Activating enzymes of the ubiquitin-like proteins
2 2 1 2 SCOP 52972 ITPase-like
2 2 2 0 SCOP 51126 Pectin lyase-like
2 2 1 0 SCOP 101960 Stabilizer of iron transporter SufD
2 2 1 1 SCOP 55040 Molybdenum cofactor biosynthesis protein C, MoaC
2 2 2 1 SCOP 53795 PEP carboxykinase-like
2 2 1 1 SCOP 64438 CNF1/YfiH-like putative cysteine hydrolases
2 2 2 1 SCOP 52255 N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)
2 2 1 0 SCOP 54523 Pili subunits
2 2 1 0 SCOP 117916 Fe-S cluster assembly (FSCA) domain-like
2 2 2 0 SCOP 46767 Methylated DNA-protein cysteine methyltransferase, C-terminal domain
2 2 2 0 SCOP 81901 HCP-like
2 2 2 2 SCOP 50692 ADC-like
2 2 1 0 SCOP 55166 Hedgehog/DD-peptidase
2 2 2 1 SCOP 50118 Cell growth inhibitor/plasmid maintenance toxic component
2 2 1 2 SCOP 56762 HydB/Nqo4-like
2 2 2 0 SCOP 54736 ClpS-like
2 2 2 1 SCOP 53732 Aconitase iron-sulfur domain
2 1 1 0 SCOP 116734 DNA methylase specificity domain
2 2 2 1 SCOP 69065 RNase III domain-like
2 2 1 1 SCOP 56219 DNase I-like
2 2 2 0 SCOP 54975 Acylphosphatase/BLUF domain-like
2 2 1 1 SCOP 51391 Thiamin phosphate synthase
2 2 1 1 SCOP 144052 Thermophilic metalloprotease-like
2 2 2 1 SCOP 89095 GatB/YqeY motif
2 2 2 0 SCOP 75138 HprK N-terminal domain-like
2 2 2 1 SCOP 56507 Methionine synthase activation domain-like
2 2 2 1 SCOP 101801 Surface presentation of antigens (SPOA)
2 2 2 1 SCOP 101473 DhaL-like
2 2 1 0 SCOP 53041 Resolvase-like
2 2 2 1 SCOP 50486 FMT C-terminal domain-like
2 2 2 1 SCOP 56091 DNA ligase/mRNA capping enzyme, catalytic domain
2 2 1 0 SCOP 109709 KorB DNA-binding domain-like
2 2 2 0 SCOP 158791 MgtE N-terminal domain-like
2 2 2 1 SCOP 56003 Molybdenum cofactor-binding domain
2 2 1 0 SCOP 143865 CorA soluble domain-like
2 2 2 0 SCOP 101898 NHL repeat
2 1 1 0 SCOP 89372 Fucose-specific lectin
2 2 2 0 SCOP 160544 EscU C-terminal domain-like
2 2 2 0 SCOP 55890 Sporulation response regulatory protein Spo0B
2 2 2 0 SCOP 159941 MM3350-like
2 2 1 0 SCOP 52935 PK C-terminal domain-like
2 2 2 0 SCOP 55658 L9 N-domain-like
2 1 1 0 SCOP 55816 5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain
2 2 2 0 SCOP 116726 TrkA C-terminal domain-like
2 1 1 1 SCOP 48029 FliG
2 2 1 1 SCOP 54719 Fe,Mn superoxide dismutase (SOD), C-terminal domain
2 2 2 0 SCOP 54791 Eukaryotic type KH-domain (KH-domain type I)
2 2 2 0 SCOP 54665 CO dehydrogenase molybdoprotein N-domain-like
2 2 2 1 SCOP 160148 CPE0013-like
2 2 2 0 SCOP 143548 Serine metabolism enzymes domain
2 2 1 0 SCOP 141322 NfeD domain-like
2 2 1 0 SCOP 144083 Magnesium transport protein CorA, transmembrane region
2 2 2 0 SCOP 110921 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain
2 2 1 1 SCOP 51984 MurCD N-terminal domain
2 2 2 0 SCOP 54768 dsRNA-binding domain-like
2 2 1 0 SCOP 54373 FAD-linked reductases, C-terminal domain
2 1 1 1 SCOP 56053 Ribosomal protein L6
2 2 2 0 SCOP 47741 CO dehydrogenase ISP C-domain like
2 2 2 0 SCOP 140490 Nqo1C-terminal domain-like
2 2 2 0 SCOP 89082 Antibiotic binding domain of TipA-like multidrug resistance regulators
2 2 1 0 SCOP 46557 GreA transcript cleavage protein, N-terminal domain
2 2 1 1 SCOP 54675 Nicotinate/Quinolinate PRTase N-terminal domain-like
2 2 1 0 SCOP 55904 Ornithine decarboxylase C-terminal domain
2 2 2 0 SCOP 47807 5' to 3' exonuclease, C-terminal subdomain
2 2 1 0 SCOP 50615 N-terminal domain of alpha and beta subunits of F1 ATP synthase
2 2 1 0 SCOP 141986 LD-carboxypeptidase A C-terminal domain-like
2 2 1 0 SCOP 55048 Probable ACP-binding domain of malonyl-CoA ACP transacylase
2 1 1 0 SCOP 49303 beta-Galactosidase/glucuronidase domain
2 2 1 0 SCOP 47757 Chemotaxis receptor methyltransferase CheR, N-terminal domain
2 1 1 0 SCOP 49493 HSP40/DnaJ peptide-binding domain
2 1 1 1 SCOP 54713 Elongation factor Ts (EF-Ts), dimerisation domain
2 2 1 0 SCOP 46609 Fe,Mn superoxide dismutase (SOD), N-terminal domain
2 1 1 0 SCOP 55666 Ribonuclease PH domain 2-like
2 2 1 1 SCOP 47917 C-terminal domain of alpha and beta subunits of F1 ATP synthase
2 2 2 0 SCOP 54556 Chitinase insertion domain
2 2 2 0 SCOP 89000 post-HMGL domain-like
2 2 2 0 SCOP 75445 D-ribose-5-phosphate isomerase (RpiA), lid domain
2 2 1 0 SCOP 160996 HI0933 insert domain-like
1 1 1 1 SCOP 56731 DNA primase core
1 1 1 1 SCOP 81338 Aquaporin-like
1 1 1 1 SCOP 74982 Small protein B (SmpB)
1 1 1 1 SCOP 56808 Ribosomal protein L1
1 1 1 1 SCOP 53178 Peptidyl-tRNA hydrolase-like
1 1 1 1 SCOP 47973 Ribosomal protein S7
1 1 1 0 SCOP 46911 Ribosomal protein S18
1 1 1 1 SCOP 75304 Amidase signature (AS) enzymes
1 1 1 1 SCOP 142433 CinA-like
1 1 1 0 SCOP 82607 YbaB-like
1 1 1 0 SCOP 64376 YlxR-like
1 1 1 0 SCOP 89919 Ribosome-binding factor A, RbfA
1 1 1 1 SCOP 54999 Ribosomal protein S10
1 1 1 1 SCOP 52166 Ribosomal protein L4
1 1 1 0 SCOP 54189 Ribosomal proteins S24e, L23 and L15e
1 1 1 1 SCOP 54570 Ribosomal protein S19
1 1 1 1 SCOP 54843 Ribosomal protein L22
1 1 1 1 SCOP 54686 Ribosomal protein L16p/L10e
1 1 1 1 SCOP 50193 Ribosomal protein L14
1 1 1 1 SCOP 55282 RL5-like
1 1 1 1 SCOP 56047 Ribosomal protein S8
1 1 1 1 SCOP 52080 Ribosomal proteins L15p and L18e
1 1 1 0 SCOP 103491 Preprotein translocase SecY subunit
1 1 1 0 SCOP 57840 Ribosomal protein L36
1 1 1 1 SCOP 46946 S13-like H2TH domain
1 1 1 1 SCOP 64263 Prokaryotic ribosomal protein L17
1 1 1 0 SCOP 143034 L35p-like
1 1 1 1 SCOP 74731 Ribosomal protein L20
1 1 1 1 SCOP 55831 Thymidylate synthase/dCMP hydroxymethylase
1 1 1 1 SCOP 141091 L21p-like
1 1 1 0 SCOP 118010 TM1457-like
1 1 1 0 SCOP 110324 Ribosomal L27 protein-like
1 1 1 0 SCOP 51695 PLC-like phosphodiesterases
1 1 1 1 SCOP 53748 Phosphoglycerate kinase
1 1 1 1 SCOP 75625 YebC-like
1 1 1 1 SCOP 47729 IHF-like DNA-binding proteins
1 1 1 1 SCOP 160369 Ribosomal protein L10-like
1 1 1 0 SCOP 46992 Ribosomal protein S20
1 1 1 1 SCOP 52943 ATP synthase (F1-ATPase), gamma subunit
1 1 1 0 SCOP 81333 F1F0 ATP synthase subunit C
1 1 1 1 SCOP 55068 Peptide methionine sulfoxide reductase
1 1 1 1 SCOP 52161 Ribosomal protein L13
1 1 1 1 SCOP 47060 S15/NS1 RNA-binding domain
1 1 1 1 SCOP 51351 Triosephosphate isomerase (TIM)
1 1 1 1 SCOP 55194 Ribosome recycling factor, RRF
1 1 1 0 SCOP 54565 Ribosomal protein S16
1 1 1 1 SCOP 51316 Mss4-like
1 1 1 1 SCOP 69765 IpsF-like
1 1 1 0 SCOP 51730 FAD-linked oxidoreductase
1 1 1 1 SCOP 103263 Chorismate synthase, AroC
1 1 1 0 SCOP 89360 HesB-like domain
1 1 1 1 SCOP 111337 QueA-like
1 1 1 1 SCOP 51713 tRNA-guanine transglycosylase
1 1 1 0 SCOP 56276 S-adenosylmethionine decarboxylase
1 1 1 1 SCOP 52313 Ribosomal protein S2
1 1 1 0 SCOP 54285 MoaD/ThiS
1 1 1 1 SCOP 142695 RibA-like
1 1 1 1 SCOP 102705 NIF3 (NGG1p interacting factor 3)-like
1 1 1 0 SCOP 140566 FlgN-like
1 1 1 1 SCOP 52304 Type II 3-dehydroquinate dehydratase
1 1 1 0 SCOP 117130 CsrA-like
1 1 1 0 SCOP 64307 SirA-like
1 1 1 1 SCOP 52121 Lumazine synthase
1 1 1 0 SCOP 55129 Ribosomal protein L30p/L7e
1 1 1 0 SCOP 46561 Ribosomal protein L29 (L29p)
1 1 1 0 SCOP 54995 Ribosomal protein S6
1 1 1 1 SCOP 56104 SAICAR synthase-like
1 1 1 1 SCOP 143744 GlcG-like
1 1 1 1 SCOP 48613 Heme oxygenase-like
1 1 1 0 SCOP 110296 Oligoxyloglucan reducing end-specific cellobiohydrolase
1 1 1 1 SCOP 69500 DTD-like
1 1 1 1 SCOP 52799 (Phosphotyrosine protein) phosphatases II
1 1 1 0 SCOP 50630 Acid proteases
1 1 1 0 SCOP 54897 Protease propeptides/inhibitors
1 1 1 1 SCOP 53774 Glutaminase/Asparaginase
1 1 1 0 SCOP 57997 Tropomyosin
1 1 1 1 SCOP 54919 Nucleoside diphosphate kinase, NDK
1 1 1 1 SCOP 111126 Ligand-binding domain in the NO signalling and Golgi transport
1 1 1 0 SCOP 49777 PEBP-like
1 1 1 1 SCOP 53056 beta-carbonic anhydrase, cab
1 1 1 0 SCOP 55856 Cytochrome b5-like heme/steroid binding domain
1 1 1 0 SCOP 55257 RBP11-like subunits of RNA polymerase
1 1 1 1 SCOP 56529 FAH
1 1 1 1 SCOP 64153 YjeF N-terminal domain-like
1 1 1 0 SCOP 56399 ADP-ribosylation
1 1 1 0 SCOP 69618 HemD-like
1 1 1 0 SCOP 143447 AMMECR1-like
1 1 1 1 SCOP 55909 Pentein
1 1 1 0 SCOP 52788 Phosphotyrosine protein phosphatases I
1 1 1 0 SCOP 63562 RPB6/omega subunit-like
1 1 1 1 SCOP 53800 Chelatase
1 1 1 1 SCOP 63965 Precorrin-8X methylmutase CbiC/CobH
1 1 1 1 SCOP 141734 HisI-like
1 1 1 0 SCOP 144091 Rhomboid-like
1 1 1 0 SCOP 49478 Cna protein B-type domain
1 1 1 1 SCOP 111038 YjbQ-like
1 1 1 0 SCOP 102405 MCP/YpsA-like
1 1 1 0 SCOP 143243 Nqo5-like
1 1 1 0 SCOP 55718 SCP-like
1 1 1 0 SCOP 102712 JAB1/MPN domain
1 1 1 0 SCOP 55331 Tautomerase/MIF
1 1 1 1 SCOP 142754 NadA-like
1 1 1 1 SCOP 56266 DmpA/ArgJ-like
1 1 1 0 SCOP 160246 EspE N-terminal domain-like
1 1 1 0 SCOP 50022 ISP domain
1 1 1 1 SCOP 55083 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK
1 1 1 1 SCOP 64167 SurE-like
1 1 1 0 SCOP 158682 TerB-like
1 1 1 0 SCOP 143990 YbiA-like
1 1 1 0 SCOP 55154 CYTH-like phosphatases
1 1 1 1 SCOP 52507 Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
1 1 1 1 SCOP 81340 Clc chloride channel
1 1 1 1 SCOP 110710 TTHA0583/YokD-like
1 1 1 0 SCOP 141000 Glu-tRNAGln amidotransferase C subunit
1 1 1 0 SCOP 116842 XseB-like
1 1 1 1 SCOP 110399 ThiG-like
1 1 1 1 SCOP 111304 Recombination protein RecR
1 1 1 0 SCOP 159894 YgaC/TfoX-N like
1 1 1 0 SCOP 103365 Hypothetical protein PH1602
1 1 1 1 SCOP 52733 Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT)
1 1 1 0 SCOP 159133 EutN/CcmL-like
1 1 1 1 SCOP 55200 Translation initiation factor IF3, C-terminal domain
1 1 1 0 SCOP 82689 Mechanosensitive channel protein MscS (YggB), C-terminal domain
1 1 1 0 SCOP 50952 Soluble quinoprotein glucose dehydrogenase
1 1 1 0 SCOP 103084 Holliday junction resolvase RusA
1 1 1 0 SCOP 102829 Cell division protein ZapA-like
1 1 1 0 SCOP 50998 Quinoprotein alcohol dehydrogenase-like
1 1 1 0 SCOP 81330 Gated mechanosensitive channel
1 1 1 0 SCOP 48600 Chorismate mutase II
1 1 1 0 SCOP 159664 CobE/GbiG C-terminal domain-like
1 1 1 1 SCOP 160537 SpoVG-like
1 1 1 1 SCOP 140478 LemA-like
1 1 1 0 SCOP 101262 Methenyltetrahydrofolate cyclohydrolase-like
1 1 1 1 SCOP 117457 FumA C-terminal domain-like
1 1 1 0 SCOP 50814 Lipocalins
1 1 1 0 SCOP 101116 Flagellar export chaperone FliS
1 1 1 0 SCOP 141457 BH3618-like
1 1 1 1 SCOP 110738 Glycerate kinase I
1 1 1 1 SCOP 142338 CofD-like
1 1 1 0 SCOP 110391 GlpP-like
1 1 1 0 SCOP 159127 HupF/HypC-like
1 1 1 0 SCOP 75471 YhbY-like
1 1 1 0 SCOP 69754 Ribosome binding protein Y (YfiA homologue)
1 1 1 0 SCOP 48695 Multiheme cytochromes
1 1 1 0 SCOP 101498 Anti-sigma factor FlgM
1 1 1 0 SCOP 103007 Hypothetical protein TT1725
1 1 1 1 SCOP 110395 CutC-like
1 1 1 0 SCOP 141371 PilZ domain-like
1 1 1 1 SCOP 160104 Acetoacetate decarboxylase-like
1 1 1 0 SCOP 52206 Hypothetical protein MTH538
1 1 1 1 SCOP 53933 Microbial ribonucleases
1 1 1 0 SCOP 159672 CbiG N-terminal domain-like
1 1 1 0 SCOP 52038 Barstar-related
1 1 1 1 SCOP 160920 PSTPO5379-like
1 1 1 1 SCOP 111321 AF1104-like
1 1 1 1 SCOP 49367 Superoxide reductase-like
1 1 1 0 SCOP 143437 THUMP domain-like
1 1 1 1 SCOP 52490 Tubulin nucleotide-binding domain-like
1 1 1 0 SCOP 110455 Toprim domain
1 1 1 0 SCOP 63867 MoeA C-terminal domain-like
1 1 1 0 SCOP 56563 Major capsid protein gp5
1 1 1 1 SCOP 69864 Argininosuccinate synthetase, C-terminal domain
1 1 1 0 SCOP 48024 N-terminal domain of DnaB helicase
1 1 1 1 SCOP 158832 Tex N-terminal region-like
1 1 1 1 SCOP 48592 GroEL equatorial domain-like
1 1 1 1 SCOP 69336 Alpha subunit of glutamate synthase, C-terminal domain
1 1 1 0 SCOP 160113 YegP-like
1 1 1 1 SCOP 53706 Formate dehydrogenase/DMSO reductase, domains 1-3
1 1 1 0 SCOP 141530 PTSIIA/GutA-like
1 1 1 0 SCOP 57938 DnaJ/Hsp40 cysteine-rich domain
1 1 1 1 SCOP 142823 ComB-like
1 1 1 0 SCOP 49695 gamma-Crystallin-like
1 1 1 0 SCOP 69318 Integrin alpha N-terminal domain
1 1 1 1 SCOP 103032 Hypothetical protein YwqG
1 1 1 0 SCOP 160214 FlaG-like
1 1 1 0 SCOP 161187 YfgJ-like
1 1 1 0 SCOP 55608 Homing endonucleases
1 1 1 0 SCOP 82114 Riboflavin kinase-like
1 1 1 1 SCOP 46906 Ribosomal protein L11, C-terminal domain
1 1 1 0 SCOP 160443 SMR domain-like
1 1 1 0 SCOP 141099 Atu1913-like
1 1 1 0 SCOP 63825 YWTD domain
1 1 1 1 SCOP 102645 CoaB-like
1 1 1 0 SCOP 118352 HSP33 redox switch-like
1 1 1 0 SCOP 54106 LysM domain
1 1 1 0 SCOP 158397 TM1646-like
1 1 1 0 SCOP 143602 STIV B116-like
1 1 1 0 SCOP 158221 YnzC-like
1 1 1 1 SCOP 54821 Ribosomal protein S3 C-terminal domain
1 1 1 0 SCOP 81573 F1F0 ATP synthase subunit B, membrane domain
1 1 1 0 SCOP 63848 Cell-division inhibitor MinC, C-terminal domain
1 1 1 0 SCOP 111064 Hut operon positive regulatory protein HutP
1 1 1 0 SCOP 118116 DNA mismatch repair protein MutL
1 1 1 0 SCOP 143842 YwmB-like
1 1 1 0 SCOP 81336 F1F0 ATP synthase subunit A
1 1 1 0 SCOP 111342 CbiD-like
1 1 1 1 SCOP 47789 C-terminal domain of RNA polymerase alpha subunit
1 1 1 0 SCOP 51344 Epsilon subunit of F1F0-ATP synthase N-terminal domain
1 1 1 0 SCOP 141066 ICP-like
1 1 1 1 SCOP 82679 N-utilization substance G protein NusG, N-terminal domain
1 1 1 0 SCOP 56436 C-type lectin-like
1 1 1 0 SCOP 55190 Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain
1 1 1 0 SCOP 69055 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain
1 1 1 1 SCOP 52418 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
1 1 1 0 SCOP 58014 Coiled-coil domain of nucleotide exchange factor GrpE
1 1 1 0 SCOP 63999 Thiamin pyrophosphokinase, catalytic domain
1 1 1 1 SCOP 55307 Tubulin C-terminal domain-like
1 1 1 0 SCOP 48163 An anticodon-binding domain of class I aminoacyl-tRNA synthetases
1 1 1 1 SCOP 52021 Carbamoyl phosphate synthetase, small subunit N-terminal domain
1 1 1 0 SCOP 49363 Purple acid phosphatase, N-terminal domain
1 1 1 1 SCOP 52029 GroEL apical domain-like
1 1 1 0 SCOP 81891 Poly A polymerase C-terminal region-like
1 1 1 0 SCOP 68912 Rho N-terminal domain-like
1 1 1 0 SCOP 57825 Aspartate carbamoyltransferase, Regulatory-chain, C-terminal domain
1 1 1 0 SCOP 57863 ArfGap/RecO-like zinc finger
1 1 1 0 SCOP 46977 Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
1 1 1 0 SCOP 47364 Domain of the SRP/SRP receptor G-proteins
1 1 1 0 SCOP 48300 Ribosomal protein L7/12, oligomerisation (N-terminal) domain
1 1 1 1 SCOP 100920 Heat shock protein 70kD (HSP70), peptide-binding domain
1 1 1 0 SCOP 55447 CO dehydrogenase flavoprotein C-terminal domain-like
1 1 1 0 SCOP 160964 MalF N-terminal region-like
1 1 1 0 SCOP 48674 Fe-only hydrogenase smaller subunit
1 1 1 0 SCOP 55252 C-terminal domain of arginine repressor
1 1 1 0 SCOP 47648 Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
1 1 1 0 SCOP 46604 Epsilon subunit of F1F0-ATP synthase C-terminal domain
1 1 1 0 SCOP 75500 Putative transcriptional regulator TM1602, C-terminal domain
1 1 1 0 SCOP 100879 Lesion bypass DNA polymerase (Y-family), little finger domain
1 1 1 1 SCOP 63882 MoeA N-terminal region -like
1 1 1 0 SCOP 55945 TATA-box binding protein-like
1 1 1 0 SCOP 52113 BRCT domain
1 1 1 0 SCOP 53155 Methylated DNA-protein cysteine methyltransferase domain
1 1 1 0 SCOP 82861 Mechanosensitive channel protein MscS (YggB), transmembrane region
1 1 1 0 SCOP 47831 Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain
1 1 1 0 SCOP 74942 YhbC-like, C-terminal domain
1 1 1 0 SCOP 117892 Band 7/SPFH domain
1 1 1 0 SCOP 75420 YhbC-like, N-terminal domain
1 1 1 0 SCOP 54752 RecA protein, C-terminal domain
1 1 1 0 SCOP 100934 Heat shock protein 70kD (HSP70), C-terminal subdomain
1 1 1 0 SCOP 54782 Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain
1 1 1 0 SCOP 102735 Trigger factor ribosome-binding domain
1 1 1 0 SCOP 69255 gp5 N-terminal domain-like
1 1 1 0 SCOP 159283 Guanosine diphospho-D-mannose pyrophosphorylase/mannose-6-phosphate isomerase linker domain
1 1 1 0 SCOP 69189 Penicillin-binding protein associated domain
1 1 1 1 SCOP 50443 FucI/AraA C-terminal domain-like
1 1 1 0 SCOP 47446 Signal peptide-binding domain
1 1 1 1 SCOP 64397 Hsp33 domain
1 1 1 0 SCOP 54991 Anticodon-binding domain of PheRS
1 1 1 0 SCOP 82708 R3H domain
1 1 1 1 SCOP 55271 DNA repair protein MutS, domain I
1 1 1 0 SCOP 47928 N-terminal domain of the delta subunit of the F1F0-ATP synthase
1 1 1 0 SCOP 48108 Carbamoyl phosphate synthetase, large subunit connection domain
1 1 1 1 SCOP 82051 Obg GTP-binding protein N-terminal domain
1 1 1 0 SCOP 143724 PHP14-like
1 1 1 0 SCOP 46984 Smac/diablo
1 1 1 0 SCOP 140864 TROVE domain-like
1 1 1 0 SCOP 54368 Glutamine synthetase, N-terminal domain
1 1 1 0 SCOP 55261 GAD domain-like
1 1 1 0 SCOP 51269 AFP III-like domain
1 1 1 1 SCOP 64158 2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain
1 1 1 0 SCOP 110942 HSP90 C-terminal domain
1 1 1 1 SCOP 54747 Ribosomal L11/L12e N-terminal domain
1 1 1 0 SCOP 69742 Glutamyl tRNA-reductase catalytic, N-terminal domain
1 1 1 1 SCOP 75553 Smc hinge domain
1 1 1 0 SCOP 159800 PrpR receptor domain-like
1 1 1 0 SCOP 48168 R1 subunit of ribonucleotide reductase, N-terminal domain
1 1 1 1 SCOP 81886 Helical scaffold and wing domains of SecA
1 1 1 0 SCOP 54849 GroEL-intermediate domain like
1 1 1 1 SCOP 56194 Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain
1 1 1 0 SCOP 52156 Initiation factor IF2/eIF5b, domain 3
1 1 1 0 SCOP 51064 Head domain of nucleotide exchange factor GrpE
1 1 1 0 SCOP 55653 Ribosomal protein L9 C-domain
1 1 1 0 SCOP 143517 TRCF domain-like
1 1 1 1 SCOP 101353 Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
1 1 1 1 SCOP 56553 Insert subdomain of RNA polymerase alpha subunit
1 1 1 0 SCOP 46929 DNA helicase RuvA subunit, C-terminal domain
1 1 1 0 SCOP 160467 PH0987 N-terminal domain-like
1 1 1 0 SCOP 54893 Aspartate carbamoyltransferase, Regulatory-chain, N-terminal domain
1 1 1 0 SCOP 54364 Translation initiation factor IF3, N-terminal domain
1 1 1 1 SCOP 69705 Transcription factor NusA, N-terminal domain
1 1 1 0 SCOP 53150 DNA repair protein MutS, domain II
1 1 1 1 SCOP 81767 Pre-protein crosslinking domain of SecA
1 1 1 0 SCOP 140356 PPK N-terminal domain-like
1 1 1 0 SCOP 117125 Putative glucosidase YicI, C-terminal domain
1 1 1 1 SCOP 81799 Putative methyltransferase TM0872, insert domain
1 1 1 0 SCOP 82829 MesJ substrate recognition domain-like
1 1 1 0 SCOP 102741 Obg GTP-binding protein C-terminal domain
1 1 1 0 SCOP 46915 Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3
1 1 1 1 SCOP 143856 DeoB insert domain-like

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The following superfamilies have one or more weak hits:

SCOP superfamily Myosin rod fragments
SCOP superfamily Neurotransmitter-gated ion-channel transmembrane pore
SCOP superfamily Subunits of heterodimeric actin filament capping protein Capz
SCOP superfamily Hypothetical protein TM0875
SCOP superfamily Hypothetical protein YjiA, C-terminal domain
SCOP superfamily C-terminal autoproteolytic domain of nucleoporin nup98
SCOP superfamily Heme chaperone CcmE
SCOP superfamily N-utilization substance G protein NusG, insert domain
SCOP superfamily beta-sandwich domain of Sec23/24
SCOP superfamily PAP/OAS1 substrate-binding domain
SCOP superfamily Nucleotidyltransferase substrate binding subunit/domain
SCOP superfamily PsbU/PolX domain-like
SCOP superfamily Photosystem I reaction center subunit XI, PsaL
SCOP superfamily Cytochrome c oxidase subunit III-like
SCOP superfamily Family A G protein-coupled receptor-like
SCOP superfamily Adenylylcyclase toxin (the edema factor)
SCOP superfamily Rad50 coiled-coil Zn hook
SCOP superfamily Chemotaxis phosphatase CheZ
SCOP superfamily Mitotic arrest deficient-like 1, Mad1
SCOP superfamily Zinc-binding domain of translation initiation factor 2 beta
SCOP superfamily Rotavirus NSP2 fragment, C-terminal domain
SCOP superfamily Cullin repeat-like
SCOP superfamily Translin
SCOP superfamily Variable surface antigen VlsE
SCOP superfamily TolA/TonB C-terminal domain
SCOP superfamily C-terminal domain of PLC-beta
SCOP superfamily C-terminal domain of adenylylcyclase associated protein
SCOP superfamily RecG, N-terminal domain
SCOP superfamily FAT domain of focal adhesion kinase
SCOP superfamily Thiamin pyrophosphokinase, substrate-binding domain
SCOP superfamily Apolipoprotein A-I
SCOP superfamily Bacterial hemolysins
SCOP superfamily Fibritin
SCOP superfamily FYVE/PHD zinc finger
SCOP superfamily RING/U-box
SCOP superfamily beta-beta-alpha zinc fingers
SCOP superfamily Porins
SCOP superfamily OMPA-like
SCOP superfamily Bcl-2 inhibitors of programmed cell death
SCOP superfamily Diphtheria toxin, middle domain
SCOP superfamily Colicin
SCOP superfamily Sec1/munc18-like (SM) proteins
SCOP superfamily Serpins
SCOP superfamily Aldehyde ferredoxin oxidoreductase, N-terminal domain
SCOP superfamily Actin depolymerizing proteins
SCOP superfamily Mog1p/PsbP-like
SCOP superfamily CytB endotoxin-like
SCOP superfamily Copper amine oxidase, domain N
SCOP superfamily Cyanase C-terminal domain
SCOP superfamily RNA-binding domain, RBD
SCOP superfamily POZ domain
SCOP superfamily Amine oxidase N-terminal region
SCOP superfamily Cystatin/monellin
SCOP superfamily Superantigen toxins, C-terminal domain
SCOP superfamily Prion-like
SCOP superfamily His-Me finger endonucleases
SCOP superfamily RNI-like
SCOP superfamily Cobalamin (vitamin B12)-dependent enzymes
SCOP superfamily YVTN repeat-like/Quinoprotein amine dehydrogenase
SCOP superfamily Sialidases
SCOP superfamily XRCC4, N-terminal domain
SCOP superfamily Transcription factor IIA (TFIIA), beta-barrel domain
SCOP superfamily STI-like
SCOP superfamily SH3-domain
SCOP superfamily Group II dsDNA viruses VP
SCOP superfamily Alpha-macroglobulin receptor domain
SCOP superfamily Clathrin adaptor appendage domain
SCOP superfamily Cadherin-like
SCOP superfamily Phospholipase C/P1 nuclease
SCOP superfamily Nuclear receptor ligand-binding domain
SCOP superfamily ENTH/VHS domain
SCOP superfamily 14-3-3 protein
SCOP superfamily Sec7 domain
SCOP superfamily Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain
SCOP superfamily Terpenoid cyclases/Protein prenyltransferases
SCOP superfamily DBL homology domain (DH-domain)
SCOP superfamily Cyclin-like
SCOP superfamily ERP29 C domain-like
SCOP superfamily Ypt/Rab-GAP domain of gyp1p
SCOP superfamily Annexin
SCOP superfamily Apolipophorin-III
SCOP superfamily t-snare proteins
SCOP superfamily STAT
SCOP superfamily Ribbon-helix-helix
SCOP superfamily Domain of poly(ADP-ribose) polymerase
SCOP superfamily EF-hand
SCOP superfamily Dimerization-anchoring domain of cAMP-dependent PK regulatory subunit
SCOP superfamily alpha-catenin/vinculin-like
SCOP superfamily Aspartate receptor, ligand-binding domain
SCOP superfamily Histone-fold
SCOP superfamily Tubulin chaperone cofactor A
SCOP superfamily Spectrin repeat
SCOP superfamily Prefoldin
SCOP superfamily PspA lactotransferrin-binding region
SCOP superfamily Gam-like
SCOP superfamily MgtE membrane domain-like
SCOP superfamily SNF-like
SCOP superfamily PsbZ-like
SCOP superfamily Photosystem II reaction center protein I, PsbI
SCOP superfamily PG1388-like
SCOP superfamily Rv2827c C-terminal domain-like
SCOP superfamily SMI1/KNR4-like
SCOP superfamily BT0923-like
SCOP superfamily V-type ATPase subunit E-like
SCOP superfamily BLRF2-like
SCOP superfamily PH1570-like
SCOP superfamily XCC0632-like
SCOP superfamily Mib/herc2 domain-like
SCOP superfamily YopX-like
SCOP superfamily LanC-like
SCOP superfamily YheA/YmcA-like
SCOP superfamily AF1862-like
SCOP superfamily TAFH domain-like
SCOP superfamily Ta0600-like
SCOP superfamily HP0062-like
SCOP superfamily FdhE-like
SCOP superfamily DUSP-like
SCOP superfamily PUG domain-like
SCOP superfamily WGR domain-like
SCOP superfamily GatD N-terminal domain-like
SCOP superfamily Agglutinin HPA-like
SCOP superfamily Duffy binding domain-like
SCOP superfamily Rhabdovirus nucleoprotein-like
SCOP superfamily Mediator hinge subcomplex-like
SCOP superfamily TM0693-like
SCOP superfamily MW0975(SA0943)-like
SCOP superfamily Endosomal sorting complex assembly domain
SCOP superfamily Vacuolar ATP synthase subunit C
SCOP superfamily Hypothetical protein MPN330
SCOP superfamily TrmE connector domain
SCOP superfamily MIT domain
SCOP superfamily Hypothetical protein yfbM
SCOP superfamily Sporulation related repeat
SCOP superfamily Hypothetical protein MTH677
SCOP superfamily Peptidylarginine deiminase Pad4, middle domain
SCOP superfamily ERO1-like
SCOP superfamily YgfY-like
SCOP superfamily A middle domain of Talin 1
SCOP superfamily CAPPD, an extracellular domain of amyloid beta A4 protein
SCOP superfamily Cag-Z
SCOP superfamily DnaK suppressor protein DksA, alpha-hairpin domain
SCOP superfamily BAR/IMD domain-like
SCOP superfamily Mitochondrial carrier
SCOP superfamily Respiratory nitrate reductase 1 gamma chain
SCOP superfamily Preprotein translocase SecE subunit
SCOP superfamily Virulence-associated V antigen
SCOP superfamily 2-methylcitrate dehydratase PrpD
SCOP superfamily Adhesin YadA, collagen-binding domain
SCOP superfamily YceI-like
SCOP superfamily Bacterial fluorinating enzyme, C-terminal domain
SCOP superfamily C-terminal domain of Ku80
SCOP superfamily Typo IV secretion system protein TraC
SCOP superfamily SPOC domain-like
SCOP superfamily IP3 receptor type 1 binding core, domain 2

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