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Runella slithyformis DSM 19594 superfamily assignments

Taxonomy
Taxonomy browser entry

Bacteria; FCB group; Bacteroidetes/Chlorobi group; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella; Runella slithyformis; Runella slithyformis DSM 19594

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Fasta format sequences
Domain assignments


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Assignment statistics

Sequences: 5774 total
3693 (64 %) with assignment
348 average length
58 % amino acid coverage
Domains: 5422 total
738 unique superfamilies
504 unique families
316 average length
7.3 average superfamily size
86 % formed by duplication
Domain combinations: 546 domain pairs
1359 unique architectures

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Superfamily assignments

Domains

Proteins

Architectures

Families

SCOP link

Superfamilies

272 236 65 9 SCOP 52540 P-loop containing nucleoside triphosphate hydrolases
185 184 27 8 SCOP 51735 NAD(P)-binding Rossmann-fold domains
128 103 29 1 SCOP 48452 TPR-like
117 96 19 0 SCOP 46689 Homeodomain-like
106 106 14 1 SCOP 56935 Porins
101 100 16 7 SCOP 53474 alpha/beta-Hydrolases
100 100 13 0 SCOP 49464 Carboxypeptidase regulatory domain-like
99 94 23 1 SCOP 52172 CheY-like
88 84 25 0 SCOP 46785 "Winged helix" DNA-binding domain
78 77 35 1 SCOP 55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
71 71 15 6 SCOP 53335 S-adenosyl-L-methionine-dependent methyltransferases
69 68 34 6 SCOP 51445 (Trans)glycosidases
61 57 18 4 SCOP 51905 FAD/NAD(P)-binding domain
60 60 7 3 SCOP 53448 Nucleotide-diphospho-sugar transferases
60 22 16 0 SCOP 55785 PYP-like sensor domain (PAS domain)
56 51 30 0 SCOP 46626 Cytochrome c
50 49 24 0 SCOP 47384 Homodimeric domain of signal transducing histidine kinase
48 48 5 3 SCOP 55347 Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
45 17 8 0 SCOP 82693 Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
44 43 3 4 SCOP 53383 PLP-dependent transferases
43 27 7 4 SCOP 53067 Actin-like ATPase domain
43 42 3 1 SCOP 103473 MFS general substrate transporter
42 33 22 4 SCOP 50249 Nucleic acid-binding proteins
42 42 4 2 SCOP 53756 UDP-Glycosyltransferase/glycogen phosphorylase
41 41 6 0 SCOP 47413 lambda repressor-like DNA-binding domains
40 40 1 2 SCOP 51658 Xylose isomerase-like
39 38 6 1 SCOP 52833 Thioredoxin-like
39 20 11 1 SCOP 82866 Multidrug efflux transporter AcrB transmembrane domain
38 34 26 2 SCOP 49785 Galactose-binding domain-like
38 38 13 6 SCOP 48208 Six-hairpin glycosidases
37 37 7 2 SCOP 55729 Acyl-CoA N-acyltransferases (Nat)
37 37 4 0 SCOP 88946 Sigma2 domain of RNA polymerase sigma factors
37 36 3 0 SCOP 88659 Sigma3 and sigma4 domains of RNA polymerase sigma factors
34 34 15 2 SCOP 52317 Class I glutamine amidotransferase-like
34 33 12 1 SCOP 52266 SGNH hydrolase
33 33 13 3 SCOP 53187 Zn-dependent exopeptidases
33 31 17 1 SCOP 82171 DPP6 N-terminal domain-like
32 32 10 3 SCOP 53649 Alkaline phosphatase-like
31 31 3 3 SCOP 52980 Restriction endonuclease-like
31 31 6 4 SCOP 51182 RmlC-like cupins
31 17 8 0 SCOP 82714 Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
30 30 11 1 SCOP 56601 beta-lactamase/transpeptidase-like
29 26 10 4 SCOP 52096 ClpP/crotonase
28 27 10 7 SCOP 51556 Metallo-dependent hydrolases
28 27 15 0 SCOP 103088 OmpA-like
27 27 11 3 SCOP 56784 HAD-like
26 26 8 4 SCOP 53098 Ribonuclease H-like
26 26 15 0 SCOP 50952 Soluble quinoprotein glucose dehydrogenase
25 22 3 0 SCOP 54909 Dimeric alpha+beta barrel
25 25 5 1 SCOP 56954 Outer membrane efflux proteins (OEP)
24 19 11 3 SCOP 52402 Adenine nucleotide alpha hydrolases-like
24 21 15 6 SCOP 54211 Ribosomal protein S5 domain 2-like
24 12 6 0 SCOP 69318 Integrin alpha N-terminal domain
23 23 5 0 SCOP 51206 cAMP-binding domain-like
23 7 6 0 SCOP 117074 Hypothetical protein PA1324
22 21 5 1 SCOP 111369 HlyD-like secretion proteins
21 20 11 2 SCOP 56059 Glutathione synthetase ATP-binding domain-like
21 21 8 2 SCOP 55486 Metalloproteases ("zincins"), catalytic domain
21 21 4 3 SCOP 56281 Metallo-hydrolase/oxidoreductase
21 17 12 0 SCOP 63829 Calcium-dependent phosphotriesterase
21 19 5 1 SCOP 54593 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
21 19 8 1 SCOP 50939 Sialidases
20 17 8 3 SCOP 75005 Arabinanase/levansucrase/invertase
19 19 6 4 SCOP 51569 Aldolase
19 19 8 1 SCOP 56300 Metallo-dependent phosphatases
19 18 11 0 SCOP 48371 ARM repeat
18 13 9 5 SCOP 52518 Thiamin diphosphate-binding fold (THDP-binding)
18 18 4 2 SCOP 55811 Nudix
18 18 7 5 SCOP 56235 N-terminal nucleophile aminohydrolases (Ntn hydrolases)
18 18 5 1 SCOP 56349 DNA breaking-rejoining enzymes
18 6 3 1 SCOP 63411 LuxS/MPP-like metallohydrolase
18 14 12 0 SCOP 49299 PKD domain
18 18 5 2 SCOP 54373 FAD-linked reductases, C-terminal domain
17 17 2 2 SCOP 102114 Radical SAM enzymes
17 17 3 0 SCOP 46894 C-terminal effector domain of the bipartite response regulators
17 15 4 0 SCOP 48179 6-phosphogluconate dehydrogenase C-terminal domain-like
16 16 10 1 SCOP 81296 E set domains
16 11 10 1 SCOP 54534 FKBP-like
16 15 8 0 SCOP 51338 Composite domain of metallo-dependent hydrolases
16 14 9 0 SCOP 50156 PDZ domain-like
15 15 11 3 SCOP 52374 Nucleotidylyl transferase
15 14 4 1 SCOP 50129 GroES-like
15 8 3 0 SCOP 103481 Multidrug resistance efflux transporter EmrE
15 15 3 2 SCOP 51604 Enolase C-terminal domain-like
15 15 2 1 SCOP 90123 ABC transporter transmembrane region
14 12 5 3 SCOP 100950 NagB/RpiA/CoA transferase-like
14 11 4 0 SCOP 52821 Rhodanese/Cell cycle control phosphatase
14 14 3 2 SCOP 51161 Trimeric LpxA-like enzymes
14 14 2 1 SCOP 109854 DinB/YfiT-like putative metalloenzymes
14 14 8 1 SCOP 53822 Periplasmic binding protein-like I
14 14 2 1 SCOP 54826 Enolase N-terminal domain-like
13 13 11 2 SCOP 55681 Class II aaRS and biotin synthetases
13 13 6 0 SCOP 54292 2Fe-2S ferredoxin-like
13 13 4 0 SCOP 54001 Cysteine proteinases
13 13 6 0 SCOP 49899 Concanavalin A-like lectins/glucanases
13 9 3 2 SCOP 53901 Thiolase-like
13 7 2 1 SCOP 56003 Molybdenum cofactor-binding domain
13 11 11 0 SCOP 49265 Fibronectin type III
12 12 8 0 SCOP 51126 Pectin lyase-like
12 4 4 0 SCOP 49313 Cadherin-like
11 11 3 2 SCOP 53613 Ribokinase-like
11 11 1 4 SCOP 47240 Ferritin-like
11 11 1 2 SCOP 53720 ALDH-like
11 11 2 2 SCOP 54637 Thioesterase/thiol ester dehydrase-isomerase
11 11 2 0 SCOP 55961 Bet v1-like
11 10 8 2 SCOP 50447 Translation proteins
11 7 5 0 SCOP 116734 DNA methylase specificity domain
11 11 4 0 SCOP 56925 OMPA-like
11 6 6 0 SCOP 54106 LysM domain
11 11 2 0 SCOP 51215 Regulatory protein AraC
11 11 7 0 SCOP 51011 Glycosyl hydrolase domain
10 10 4 0 SCOP 56112 Protein kinase-like (PK-like)
10 10 2 3 SCOP 51366 Ribulose-phoshate binding barrel
10 10 3 1 SCOP 51395 FMN-linked oxidoreductases
10 10 5 2 SCOP 109604 HD-domain/PDEase-like
10 10 3 1 SCOP 88723 PIN domain-like
10 10 3 2 SCOP 81301 Nucleotidyltransferase
10 7 7 0 SCOP 55021 ACT-like
10 7 7 0 SCOP 47781 RuvA domain 2-like
10 9 3 1 SCOP 47203 Acyl-CoA dehydrogenase C-terminal domain-like
10 6 6 0 SCOP 49303 beta-Galactosidase/glucuronidase domain
9 9 5 0 SCOP 51261 Duplicated hybrid motif
9 9 2 1 SCOP 56801 Acetyl-CoA synthetase-like
9 9 8 1 SCOP 55781 GAF domain-like
9 9 3 0 SCOP 88713 Glycoside hydrolase/deacetylase
9 9 2 0 SCOP 143422 Transposase IS200-like
9 7 5 1 SCOP 51230 Single hybrid motif
9 7 7 0 SCOP 49503 Cupredoxins
9 9 4 0 SCOP 53300 vWA-like
9 7 5 1 SCOP 50998 Quinoprotein alcohol dehydrogenase-like
9 9 3 1 SCOP 56645 Acyl-CoA dehydrogenase NM domain-like
8 8 3 2 SCOP 53271 PRTase-like
8 8 6 1 SCOP 53850 Periplasmic binding protein-like II
8 8 7 0 SCOP 54862 4Fe-4S ferredoxins
8 8 1 1 SCOP 51430 NAD(P)-linked oxidoreductase
8 8 1 0 SCOP 54427 NTF2-like
8 8 6 4 SCOP 74650 Galactose mutarotase-like
8 8 1 0 SCOP 51197 Clavaminate synthase-like
8 8 4 0 SCOP 55008 HMA, heavy metal-associated domain
8 8 2 3 SCOP 52283 Formate/glycerate dehydrogenase catalytic domain-like
8 8 6 1 SCOP 54631 CBS-domain pair
8 8 1 1 SCOP 158446 IVS-encoded protein-like
8 8 7 1 SCOP 53955 Lysozyme-like
8 6 5 0 SCOP 74653 TolA/TonB C-terminal domain
8 8 8 0 SCOP 46548 alpha-helical ferredoxin
8 8 5 0 SCOP 53244 MurD-like peptide ligases, peptide-binding domain
8 8 7 2 SCOP 56176 FAD-binding/transporter-associated domain-like
8 8 4 0 SCOP 81665 Calcium ATPase, transmembrane domain M
8 7 5 1 SCOP 52440 PreATP-grasp domain
8 8 3 0 SCOP 158472 HAMP domain-like
8 8 5 2 SCOP 53623 MurD-like peptide ligases, catalytic domain
8 8 2 0 SCOP 55031 Bacterial exopeptidase dimerisation domain
8 8 4 0 SCOP 81653 Calcium ATPase, transduction domain A
7 7 3 3 SCOP 53697 SIS domain
7 7 5 0 SCOP 51695 PLC-like phosphodiesterases
7 7 2 1 SCOP 53686 Tryptophan synthase beta subunit-like PLP-dependent enzymes
7 6 2 0 SCOP 48317 Acid phosphatase/Vanadium-dependent haloperoxidase
7 5 3 3 SCOP 54506 Diaminopimelate epimerase-like
7 7 4 0 SCOP 56317 Carbon-nitrogen hydrolase
7 7 1 0 SCOP 143011 RelE-like
7 7 5 0 SCOP 89550 PHP domain-like
7 5 3 0 SCOP 82153 FAS1 domain
7 6 6 1 SCOP 47323 Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
7 4 3 1 SCOP 54980 EF-G C-terminal domain-like
7 7 3 0 SCOP 49344 CBD9-like
7 6 2 1 SCOP 56042 PurM C-terminal domain-like
7 6 2 1 SCOP 55326 PurM N-terminal domain-like
7 7 5 0 SCOP 55545 beta-N-acetylhexosaminidase-like domain
6 6 3 2 SCOP 53927 Cytidine deaminase-like
6 6 2 0 SCOP 69593 Glycerol-3-phosphate (1)-acyltransferase
6 6 3 4 SCOP 53659 Isocitrate/Isopropylmalate dehydrogenase-like
6 6 1 1 SCOP 55298 YjgF-like
6 6 5 2 SCOP 51419 PLP-binding barrel
6 6 3 1 SCOP 50475 FMN-binding split barrel
6 6 4 2 SCOP 56672 DNA/RNA polymerases
6 5 4 0 SCOP 110296 Oligoxyloglucan reducing end-specific cellobiohydrolase
6 6 3 0 SCOP 51306 LexA/Signal peptidase
6 6 3 1 SCOP 56529 FAH
6 6 5 1 SCOP 50494 Trypsin-like serine proteases
6 6 4 0 SCOP 50022 ISP domain
6 6 3 1 SCOP 56219 DNase I-like
6 6 6 1 SCOP 88697 PUA domain-like
6 6 2 1 SCOP 101874 YceI-like
6 6 4 0 SCOP 49452 Starch-binding domain-like
6 6 2 0 SCOP 89562 RraA-like
6 6 2 0 SCOP 48498 Tetracyclin repressor-like, C-terminal domain
6 6 3 0 SCOP 48230 Chondroitin AC/alginate lyase
6 6 4 1 SCOP 52922 TK C-terminal domain-like
6 2 1 1 SCOP 55973 S-adenosylmethionine synthetase
6 5 4 0 SCOP 63380 Riboflavin synthase domain-like
6 2 2 0 SCOP 103647 TSP type-3 repeat
6 6 1 0 SCOP 47741 CO dehydrogenase ISP C-domain like
6 2 2 0 SCOP 53738 Phosphoglucomutase, first 3 domains
5 5 4 1 SCOP 50104 Translation proteins SH3-like domain
5 5 3 1 SCOP 55920 Creatinase/aminopeptidase
5 5 3 1 SCOP 75217 alpha/beta knot
5 5 4 2 SCOP 53633 Carbamate kinase-like
5 5 2 2 SCOP 52151 FabD/lysophospholipase-like
5 5 4 3 SCOP 55931 Glutamine synthetase/guanido kinase
5 5 2 1 SCOP 102405 MCP/YpsA-like
5 5 3 0 SCOP 46955 Putative DNA-binding domain
5 5 5 0 SCOP 81901 HCP-like
5 5 4 3 SCOP 52467 DHS-like NAD/FAD-binding domain
5 5 3 1 SCOP 102588 LmbE-like
5 5 3 1 SCOP 52743 Subtilisin-like
5 5 4 0 SCOP 69304 Tricorn protease N-terminal domain
5 5 4 0 SCOP 82185 Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain
5 5 3 0 SCOP 52129 Caspase-like
5 5 1 0 SCOP 55060 GHMP Kinase, C-terminal domain
5 5 2 1 SCOP 52025 PA domain
4 4 1 1 SCOP 53790 Tetrapyrrole methylase
4 4 1 1 SCOP 111331 NAD kinase/diacylglycerol kinase-like
4 4 2 1 SCOP 53597 Dihydrofolate reductase-like
4 4 1 1 SCOP 82784 OsmC-like
4 4 1 1 SCOP 48557 L-aspartase-like
4 4 4 2 SCOP 55821 YrdC/RibB
4 4 2 2 SCOP 48150 DNA-glycosylase
4 4 3 3 SCOP 51621 Phosphoenolpyruvate/pyruvate domain
4 4 1 0 SCOP 53254 Phosphoglycerate mutase-like
4 4 4 1 SCOP 54060 His-Me finger endonucleases
4 4 1 2 SCOP 56796 Dehydroquinate synthase-like
4 4 4 0 SCOP 47226 Histidine-containing phosphotransfer domain, HPT domain
4 4 4 0 SCOP 52047 RNI-like
4 4 2 2 SCOP 55620 Tetrahydrobiopterin biosynthesis enzymes-like
4 4 4 1 SCOP 52954 Class II aaRS ABD-related
4 4 2 0 SCOP 69118 AhpD-like
4 4 3 1 SCOP 52016 LeuD/IlvD-like
4 4 4 0 SCOP 57783 Zinc beta-ribbon
4 4 1 1 SCOP 49482 Aromatic compound dioxygenase
4 4 3 0 SCOP 117916 Fe-S cluster assembly (FSCA) domain-like
4 4 2 1 SCOP 56524 Oxidoreductase molybdopterin-binding domain
4 4 4 1 SCOP 50692 ADC-like
4 4 3 0 SCOP 55166 Hedgehog/DD-peptidase
4 3 3 0 SCOP 101386 all-alpha NTP pyrophosphatases
4 3 3 1 SCOP 54814 Prokaryotic type KH domain (KH-domain type II)
4 4 2 1 SCOP 143631 ApbE-like
4 4 4 1 SCOP 52242 Cobalamin (vitamin B12)-binding domain
4 4 1 1 SCOP 53041 Resolvase-like
4 3 2 1 SCOP 56024 Phospholipase D/nuclease
4 4 3 1 SCOP 52738 Methylesterase CheB, C-terminal domain
4 4 3 1 SCOP 52777 CoA-dependent acyltransferases
4 4 3 0 SCOP 52343 Ferredoxin reductase-like, C-terminal NADP-linked domain
4 4 4 1 SCOP 53706 Formate dehydrogenase/DMSO reductase, domains 1-3
4 4 2 1 SCOP 51246 Rudiment single hybrid motif
4 4 4 0 SCOP 63825 YWTD domain
4 4 2 3 SCOP 53223 Aminoacid dehydrogenase-like, N-terminal domain
4 3 3 0 SCOP 56014 Nitrite and sulphite reductase 4Fe-4S domain-like
4 4 3 1 SCOP 48019 post-AAA+ oligomerization domain-like
4 4 3 1 SCOP 56719 Type II DNA topoisomerase
4 3 3 1 SCOP 51971 Nucleotide-binding domain
4 4 1 1 SCOP 56436 C-type lectin-like
4 4 3 1 SCOP 50621 Alanine racemase C-terminal domain-like
4 4 2 0 SCOP 117892 Band 7/SPFH domain
4 3 3 0 SCOP 55124 Nitrite/Sulfite reductase N-terminal domain-like
3 3 2 1 SCOP 53167 Purine and uridine phosphorylases
3 3 3 0 SCOP 57716 Glucocorticoid receptor-like (DNA-binding domain)
3 3 3 0 SCOP 109998 Triger factor/SurA peptide-binding domain-like
3 3 2 2 SCOP 56770 HydA/Nqo6-like
3 3 1 1 SCOP 56655 Carbohydrate phosphatase
3 3 1 1 SCOP 48576 Terpenoid synthases
3 3 1 0 SCOP 81452 Cytochrome c oxidase subunit III-like
3 3 1 0 SCOP 49764 HSP20-like chaperones
3 3 3 0 SCOP 50182 Sm-like ribonucleoproteins
3 3 1 1 SCOP 51726 UROD/MetE-like
3 3 2 0 SCOP 50891 Cyclophilin-like
3 3 3 1 SCOP 53328 Formyltransferase
3 3 1 1 SCOP 56322 ADC synthase
3 2 2 0 SCOP 48403 Ankyrin repeat
3 3 1 1 SCOP 69572 Activating enzymes of the ubiquitin-like proteins
3 3 1 1 SCOP 56752 D-aminoacid aminotransferase-like PLP-dependent enzymes
3 3 2 0 SCOP 47819 HRDC-like
3 3 3 0 SCOP 110849 ParB/Sulfiredoxin
3 3 3 0 SCOP 52058 L domain-like
3 3 2 2 SCOP 55909 Pentein
3 3 1 0 SCOP 46458 Globin-like
3 3 2 0 SCOP 144091 Rhomboid-like
3 3 3 0 SCOP 81324 Voltage-gated potassium channels
3 3 2 1 SCOP 53795 PEP carboxykinase-like
3 3 3 0 SCOP 46767 Methylated DNA-protein cysteine methyltransferase, C-terminal domain
3 3 1 2 SCOP 56762 HydB/Nqo4-like
3 3 3 1 SCOP 53218 Molybdenum cofactor biosynthesis proteins
3 3 3 0 SCOP 50800 PK beta-barrel domain-like
3 3 1 1 SCOP 50993 Peptidase/esterase 'gauge' domain
3 3 2 0 SCOP 51004 C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
3 3 1 0 SCOP 159888 YdhG-like
3 3 2 0 SCOP 111384 OmpH-like
3 3 3 1 SCOP 51703 Cobalamin (vitamin B12)-dependent enzymes
3 3 1 0 SCOP 75011 3-carboxy-cis,cis-mucoante lactonizing enzyme
3 3 2 0 SCOP 48695 Multiheme cytochromes
3 3 3 1 SCOP 50974 Nitrous oxide reductase, N-terminal domain
3 3 2 1 SCOP 55424 FAD/NAD-linked reductases, dimerisation (C-terminal) domain
3 3 2 0 SCOP 46589 tRNA-binding arm
3 1 1 0 SCOP 55979 DNA clamp
3 3 3 0 SCOP 55103 FAD-linked oxidases, C-terminal domain
3 3 3 0 SCOP 101898 NHL repeat
3 3 1 0 SCOP 81923 Double Clp-N motif
3 2 2 0 SCOP 49373 Invasin/intimin cell-adhesion fragments
3 3 3 1 SCOP 48334 DNA repair protein MutS, domain III
3 3 3 0 SCOP 49363 Purple acid phosphatase, N-terminal domain
3 3 2 0 SCOP 52279 Beta-D-glucan exohydrolase, C-terminal domain
3 3 2 0 SCOP 63418 MurE/MurF N-terminal domain
3 3 1 0 SCOP 51984 MurCD N-terminal domain
3 3 3 1 SCOP 50677 ValRS/IleRS/LeuRS editing domain
3 3 3 1 SCOP 81271 TGS-like
3 3 3 0 SCOP 141072 CalX-like
3 3 2 0 SCOP 47757 Chemotaxis receptor methyltransferase CheR, N-terminal domain
3 3 2 0 SCOP 47005 Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
2 2 2 1 SCOP 56731 DNA primase core
2 2 1 0 SCOP 57829 Zn-binding ribosomal proteins
2 2 2 1 SCOP 75304 Amidase signature (AS) enzymes
2 2 1 1 SCOP 56420 Peptide deformylase
2 2 2 1 SCOP 142433 CinA-like
2 2 2 0 SCOP 54197 HIT-like
2 2 1 1 SCOP 53137 Translational machinery components
2 2 2 1 SCOP 46946 S13-like H2TH domain
2 2 2 1 SCOP 64182 DHH phosphoesterases
2 1 1 0 SCOP 56214 4'-phosphopantetheinyl transferase
2 2 2 0 SCOP 52218 Flavoproteins
2 2 1 0 SCOP 143800 L28p-like
2 2 1 1 SCOP 75620 Release factor
2 2 1 0 SCOP 47336 ACP-like
2 2 2 1 SCOP 55174 Alpha-L RNA-binding motif
2 2 1 0 SCOP 47729 IHF-like DNA-binding proteins
2 2 1 1 SCOP 51316 Mss4-like
2 2 1 2 SCOP 64484 beta and beta-prime subunits of DNA dependent RNA-polymerase
2 2 2 1 SCOP 51730 FAD-linked oxidoreductase
2 2 2 0 SCOP 111283 Putative modulator of DNA gyrase, PmbA/TldD
2 2 1 0 SCOP 89360 HesB-like domain
2 2 2 1 SCOP 111337 QueA-like
2 2 2 1 SCOP 50715 Ribosomal protein L25-like
2 2 1 1 SCOP 102705 NIF3 (NGG1p interacting factor 3)-like
2 2 2 0 SCOP 75169 DsrEFH-like
2 2 2 0 SCOP 56988 Anthrax protective antigen
2 2 1 0 SCOP 55315 L30e-like
2 2 1 0 SCOP 48239 Terpenoid cyclases/Protein prenyltransferases
2 2 1 1 SCOP 53774 Glutaminase/Asparaginase
2 2 1 0 SCOP 57997 Tropomyosin
2 2 2 0 SCOP 48439 Protein prenylyltransferase
2 2 2 1 SCOP 53639 AraD/HMP-PK domain-like
2 2 1 2 SCOP 52972 ITPase-like
2 1 1 1 SCOP 48113 Heme-dependent peroxidases
2 2 2 0 SCOP 81343 Fumarate reductase respiratory complex transmembrane subunits
2 2 1 1 SCOP 53056 beta-carbonic anhydrase, cab
2 2 1 0 SCOP 56399 ADP-ribosylation
2 2 1 0 SCOP 58113 Apolipoprotein A-I
2 2 2 1 SCOP 52788 Phosphotyrosine protein phosphatases I
2 2 2 1 SCOP 81442 Cytochrome c oxidase subunit I-like
2 2 1 1 SCOP 101960 Stabilizer of iron transporter SufD
2 2 2 0 SCOP 49478 Cna protein B-type domain
2 2 1 0 SCOP 143243 Nqo5-like
2 2 2 0 SCOP 52091 SpoIIaa-like
2 2 2 1 SCOP 51717 Dihydropteroate synthetase-like
2 2 2 0 SCOP 55073 Nucleotide cyclase
2 2 1 1 SCOP 48264 Cytochrome P450
2 2 1 0 SCOP 47598 Ribbon-helix-helix
2 2 1 0 SCOP 103256 Hypothetical protein TM0160
2 2 1 1 SCOP 89733 L-sulfolactate dehydrogenase-like
2 2 2 1 SCOP 117782 YbjQ-like
2 2 2 1 SCOP 159501 EreA/ChaN-like
2 2 2 1 SCOP 54736 ClpS-like
2 2 2 1 SCOP 53732 Aconitase iron-sulfur domain
2 2 2 0 SCOP 49879 SMAD/FHA domain
2 2 1 1 SCOP 143847 XisI-like
2 2 1 1 SCOP 48173 Cryptochrome/photolyase FAD-binding domain
2 2 1 1 SCOP 52425 Cryptochrome/photolyase, N-terminal domain
2 2 2 0 SCOP 50969 YVTN repeat-like/Quinoprotein amine dehydrogenase
2 2 2 1 SCOP 89095 GatB/YqeY motif
2 2 2 0 SCOP 48600 Chorismate mutase II
2 2 1 1 SCOP 118215 Proton glutamate symport protein
2 2 1 1 SCOP 140478 LemA-like
2 2 2 2 SCOP 52335 Methylglyoxal synthase-like
2 2 1 0 SCOP 140931 Fic-like
2 2 2 1 SCOP 50486 FMT C-terminal domain-like
2 2 2 0 SCOP 160574 BT0923-like
2 2 1 0 SCOP 142906 YjbR-like
2 2 2 0 SCOP 55136 Probable bacterial effector-binding domain
2 2 2 1 SCOP 56091 DNA ligase/mRNA capping enzyme, catalytic domain
2 2 2 1 SCOP 46565 Chaperone J-domain
2 2 2 1 SCOP 55186 ThrRS/AlaRS common domain
2 2 2 0 SCOP 141523 L,D-transpeptidase catalytic domain-like
2 2 1 0 SCOP 53092 Creatinase/prolidase N-terminal domain
2 2 1 1 SCOP 50465 EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
2 2 1 1 SCOP 143865 CorA soluble domain-like
2 2 1 0 SCOP 49384 Carbohydrate-binding domain
2 2 2 0 SCOP 55658 L9 N-domain-like
2 2 2 0 SCOP 55816 5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain
2 1 1 0 SCOP 53681 Aspartate/glutamate racemase
2 2 2 1 SCOP 52210 Succinyl-CoA synthetase domains
2 2 2 1 SCOP 56037 PheT/TilS domain
2 2 2 1 SCOP 52418 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
2 2 1 1 SCOP 53671 Aspartate/ornithine carbamoyltransferase
2 2 1 1 SCOP 54719 Fe,Mn superoxide dismutase (SOD), C-terminal domain
2 2 2 0 SCOP 54791 Eukaryotic type KH-domain (KH-domain type I)
2 2 2 1 SCOP 56425 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
2 2 1 0 SCOP 143548 Serine metabolism enzymes domain
2 2 2 0 SCOP 46977 Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
2 2 2 0 SCOP 63737 Leukotriene A4 hydrolase N-terminal domain
2 2 2 0 SCOP 46600 C-terminal UvrC-binding domain of UvrB
2 2 1 0 SCOP 144083 Magnesium transport protein CorA, transmembrane region
2 2 2 0 SCOP 47648 Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
2 2 1 0 SCOP 47823 lambda integrase-like, N-terminal domain
2 2 2 0 SCOP 54768 dsRNA-binding domain-like
2 2 2 0 SCOP 52113 BRCT domain
2 2 2 0 SCOP 53155 Methylated DNA-protein cysteine methyltransferase domain
2 2 2 0 SCOP 82861 Mechanosensitive channel protein MscS (YggB), transmembrane region
2 1 1 1 SCOP 56053 Ribosomal protein L6
2 2 1 0 SCOP 52413 UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
2 2 2 0 SCOP 55957 Phosphoglucomutase, C-terminal domain
2 2 1 1 SCOP 53743 FucI/AraA N-terminal and middle domains
2 2 1 1 SCOP 143975 IlvD/EDD N-terminal domain-like
2 2 1 1 SCOP 50443 FucI/AraA C-terminal domain-like
2 2 1 1 SCOP 50615 N-terminal domain of alpha and beta subunits of F1 ATP synthase
2 2 1 0 SCOP 141986 LD-carboxypeptidase A C-terminal domain-like
2 2 1 0 SCOP 54368 Glutamine synthetase, N-terminal domain
2 1 1 0 SCOP 49493 HSP40/DnaJ peptide-binding domain
2 1 1 0 SCOP 54713 Elongation factor Ts (EF-Ts), dimerisation domain
2 2 1 1 SCOP 46609 Fe,Mn superoxide dismutase (SOD), N-terminal domain
2 1 1 1 SCOP 55666 Ribonuclease PH domain 2-like
2 2 1 1 SCOP 47917 C-terminal domain of alpha and beta subunits of F1 ATP synthase
2 2 2 0 SCOP 54184 Penicillin-binding protein 2x (pbp-2x), c-terminal domain
2 2 2 0 SCOP 56519 Penicillin binding protein dimerisation domain
1 1 1 0 SCOP 48013 NusB-like
1 1 1 1 SCOP 81338 Aquaporin-like
1 1 1 1 SCOP 74982 Small protein B (SmpB)
1 1 1 1 SCOP 56808 Ribosomal protein L1
1 1 1 1 SCOP 53178 Peptidyl-tRNA hydrolase-like
1 1 1 1 SCOP 47973 Ribosomal protein S7
1 1 1 0 SCOP 46911 Ribosomal protein S18
1 1 1 1 SCOP 52141 Uracil-DNA glycosylase-like
1 1 1 0 SCOP 143597 YojJ-like
1 1 1 1 SCOP 81606 PP2C-like
1 1 1 0 SCOP 82607 YbaB-like
1 1 1 0 SCOP 89919 Ribosome-binding factor A, RbfA
1 1 1 1 SCOP 54999 Ribosomal protein S10
1 1 1 1 SCOP 52166 Ribosomal protein L4
1 1 1 0 SCOP 54189 Ribosomal proteins S24e, L23 and L15e
1 1 1 1 SCOP 54570 Ribosomal protein S19
1 1 1 0 SCOP 54843 Ribosomal protein L22
1 1 1 1 SCOP 54686 Ribosomal protein L16p/L10e
1 1 1 1 SCOP 50193 Ribosomal protein L14
1 1 1 1 SCOP 55282 RL5-like
1 1 1 1 SCOP 56047 Ribosomal protein S8
1 1 1 1 SCOP 52080 Ribosomal proteins L15p and L18e
1 1 1 0 SCOP 103491 Preprotein translocase SecY subunit
1 1 1 0 SCOP 57840 Ribosomal protein L36
1 1 1 1 SCOP 64263 Prokaryotic ribosomal protein L17
1 1 1 0 SCOP 143034 L35p-like
1 1 1 1 SCOP 74731 Ribosomal protein L20
1 1 1 1 SCOP 53784 Phosphofructokinase
1 1 1 1 SCOP 55831 Thymidylate synthase/dCMP hydroxymethylase
1 1 1 0 SCOP 141091 L21p-like
1 1 1 0 SCOP 110324 Ribosomal L27 protein-like
1 1 1 1 SCOP 53748 Phosphoglycerate kinase
1 1 1 1 SCOP 75625 YebC-like
1 1 1 0 SCOP 82649 SufE/NifU
1 1 1 1 SCOP 50324 Inorganic pyrophosphatase
1 1 1 0 SCOP 160369 Ribosomal protein L10-like
1 1 1 0 SCOP 46992 Ribosomal protein S20
1 1 1 1 SCOP 89623 Ribose/Galactose isomerase RpiB/AlsB
1 1 1 1 SCOP 52943 ATP synthase (F1-ATPase), gamma subunit
1 1 1 0 SCOP 81333 F1F0 ATP synthase subunit C
1 1 1 1 SCOP 55068 Peptide methionine sulfoxide reductase
1 1 1 1 SCOP 52161 Ribosomal protein L13
1 1 1 1 SCOP 47060 S15/NS1 RNA-binding domain
1 1 1 1 SCOP 51351 Triosephosphate isomerase (TIM)
1 1 1 1 SCOP 55194 Ribosome recycling factor, RRF
1 1 1 0 SCOP 54565 Ribosomal protein S16
1 1 1 1 SCOP 69765 IpsF-like
1 1 1 1 SCOP 103263 Chorismate synthase, AroC
1 1 1 1 SCOP 51713 tRNA-guanine transglycosylase
1 1 1 1 SCOP 51412 Inosine monophosphate dehydrogenase (IMPDH)
1 1 1 1 SCOP 52313 Ribosomal protein S2
1 1 1 1 SCOP 64005 Undecaprenyl diphosphate synthase
1 1 1 0 SCOP 54285 MoaD/ThiS
1 1 1 1 SCOP 142695 RibA-like
1 1 1 0 SCOP 101908 Putative isomerase YbhE
1 1 1 1 SCOP 55205 EPT/RTPC-like
1 1 1 1 SCOP 52304 Type II 3-dehydroquinate dehydratase
1 1 1 0 SCOP 50685 Barwin-like endoglucanases
1 1 1 1 SCOP 52121 Lumazine synthase
1 1 1 0 SCOP 55129 Ribosomal protein L30p/L7e
1 1 1 0 SCOP 46561 Ribosomal protein L29 (L29p)
1 1 1 0 SCOP 54995 Ribosomal protein S6
1 1 1 1 SCOP 56104 SAICAR synthase-like
1 1 1 0 SCOP 52949 Macro domain-like
1 1 1 0 SCOP 54495 UBC-like
1 1 1 0 SCOP 47095 HMG-box
1 1 1 0 SCOP 50978 WD40 repeat-like
1 1 1 0 SCOP 55469 FMN-dependent nitroreductase-like
1 1 1 1 SCOP 48256 Citrate synthase
1 1 1 0 SCOP 48613 Heme oxygenase-like
1 1 1 0 SCOP 81321 Family A G protein-coupled receptor-like
1 1 1 1 SCOP 69500 DTD-like
1 1 1 1 SCOP 102886 Coproporphyrinogen III oxidase
1 1 1 0 SCOP 53590 Nucleoside hydrolase
1 1 1 0 SCOP 50630 Acid proteases
1 1 1 0 SCOP 55144 LigT-like
1 1 1 0 SCOP 55248 PCD-like
1 1 1 0 SCOP 54897 Protease propeptides/inhibitors
1 1 1 0 SCOP 54928 RNA-binding domain, RBD
1 1 1 1 SCOP 54919 Nucleoside diphosphate kinase, NDK
1 1 1 0 SCOP 111126 Ligand-binding domain in the NO signalling and Golgi transport
1 1 1 1 SCOP 82282 Homocysteine S-methyltransferase
1 1 1 0 SCOP 55257 RBP11-like subunits of RNA polymerase
1 1 1 0 SCOP 64153 YjeF N-terminal domain-like
1 1 1 0 SCOP 55159 eIF1-like
1 1 1 0 SCOP 69618 HemD-like
1 1 1 0 SCOP 52768 Arginase/deacetylase
1 1 1 0 SCOP 63562 RPB6/omega subunit-like
1 1 1 1 SCOP 53800 Chelatase
1 1 1 1 SCOP 141734 HisI-like
1 1 1 0 SCOP 101478 ADP-ribosylglycohydrolase
1 1 1 0 SCOP 111038 YjbQ-like
1 1 1 1 SCOP 55040 Molybdenum cofactor biosynthesis protein C, MoaC
1 1 1 0 SCOP 103642 Sec-C motif
1 1 1 1 SCOP 51998 PFL-like glycyl radical enzymes
1 1 1 0 SCOP 55718 SCP-like
1 1 1 0 SCOP 102712 JAB1/MPN domain
1 1 1 1 SCOP 64438 CNF1/YfiH-like putative cysteine hydrolases
1 1 1 1 SCOP 52255 N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)
1 1 1 1 SCOP 111352 Ammonium transporter
1 1 1 1 SCOP 142754 NadA-like
1 1 1 1 SCOP 56266 DmpA/ArgJ-like
1 1 1 0 SCOP 143100 TTHA1013/TTHA0281-like
1 1 1 0 SCOP 82771 GIY-YIG endonuclease
1 1 1 0 SCOP 82697 PurS-like
1 1 1 0 SCOP 53807 "Helical backbone" metal receptor
1 1 1 0 SCOP 51679 Bacterial luciferase-like
1 1 1 0 SCOP 55083 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK
1 1 1 1 SCOP 64167 SurE-like
1 1 1 0 SCOP 158682 TerB-like
1 1 1 0 SCOP 110857 Gamma-glutamyl cyclotransferase-like
1 1 1 1 SCOP 63892 Pyridoxine 5'-phosphate synthase
1 1 1 1 SCOP 52507 Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
1 1 1 0 SCOP 81340 Clc chloride channel
1 1 1 0 SCOP 161111 Cation efflux protein transmembrane domain-like
1 1 1 1 SCOP 54690 Molybdopterin synthase subunit MoaE
1 1 1 0 SCOP 54913 GlnB-like
1 1 1 0 SCOP 102215 Creatininase
1 1 1 0 SCOP 141000 Glu-tRNAGln amidotransferase C subunit
1 1 1 1 SCOP 111304 Recombination protein RecR
1 1 1 0 SCOP 54786 YcfA/nrd intein domain
1 1 1 1 SCOP 103365 Hypothetical protein PH1602
1 1 1 0 SCOP 69065 RNase III domain-like
1 1 1 0 SCOP 55200 Translation initiation factor IF3, C-terminal domain
1 1 1 1 SCOP 143081 BB1717-like
1 1 1 0 SCOP 82689 Mechanosensitive channel protein MscS (YggB), C-terminal domain
1 1 1 0 SCOP 117396 TM1631-like
1 1 1 0 SCOP 141694 AF2212/PG0164-like
1 1 1 0 SCOP 54975 Acylphosphatase/BLUF domain-like
1 1 1 0 SCOP 160719 gpW/gp25-like
1 1 1 0 SCOP 158997 Trm112p-like
1 1 1 1 SCOP 53213 LigB-like
1 1 1 0 SCOP 102829 Cell division protein ZapA-like
1 1 1 0 SCOP 51391 Thiamin phosphate synthase
1 1 1 1 SCOP 143456 VC0467-like
1 1 1 0 SCOP 140804 YidB-like
1 1 1 1 SCOP 89028 Cobalamin adenosyltransferase-like
1 1 1 0 SCOP 81330 Gated mechanosensitive channel
1 1 1 0 SCOP 89392 Prokaryotic lipoproteins and lipoprotein localization factors
1 1 1 0 SCOP 110916 Peptidyl-tRNA hydrolase domain-like
1 1 1 1 SCOP 89796 CoA-transferase family III (CaiB/BaiF)
1 1 1 1 SCOP 103025 Folate-binding domain
1 1 1 1 SCOP 110069 ApaG-like
1 1 1 0 SCOP 48295 TrpR-like
1 1 1 0 SCOP 53323 Pyruvate-ferredoxin oxidoreductase, PFOR, domain III
1 1 1 0 SCOP 57802 Rubredoxin-like
1 1 1 0 SCOP 143430 TTP0101/SSO1404-like
1 1 1 0 SCOP 50037 C-terminal domain of transcriptional repressors
1 1 1 0 SCOP 69322 Tricorn protease domain 2
1 1 1 1 SCOP 50814 Lipocalins
1 1 1 1 SCOP 56507 Methionine synthase activation domain-like
1 1 1 0 SCOP 64288 Chorismate lyase-like
1 1 1 1 SCOP 110738 Glycerate kinase I
1 1 1 1 SCOP 51219 TRAP-like
1 1 1 0 SCOP 117070 LEA14-like
1 1 1 0 SCOP 53163 HybD-like
1 1 1 0 SCOP 159127 HupF/HypC-like
1 1 1 0 SCOP 81593 Nucleotidyltransferase substrate binding subunit/domain
1 1 1 0 SCOP 50331 MOP-like
1 1 1 0 SCOP 69754 Ribosome binding protein Y (YfiA homologue)
1 1 1 0 SCOP 103501 Respiratory nitrate reductase 1 gamma chain
1 1 1 0 SCOP 103515 Autotransporter
1 1 1 1 SCOP 110395 CutC-like
1 1 1 1 SCOP 56534 Aromatic aminoacid monoxygenases, catalytic and oligomerization domains
1 1 1 0 SCOP 109709 KorB DNA-binding domain-like
1 1 1 0 SCOP 158791 MgtE N-terminal domain-like
1 1 1 0 SCOP 102198 Putative cyclase
1 1 1 0 SCOP 69349 Phage fibre proteins
1 1 1 0 SCOP 52038 Barstar-related
1 1 1 0 SCOP 50346 PRC-barrel domain
1 1 1 1 SCOP 56574 Serpins
1 1 1 1 SCOP 52490 Tubulin nucleotide-binding domain-like
1 1 1 0 SCOP 63867 MoeA C-terminal domain-like
1 1 1 0 SCOP 69864 Argininosuccinate synthetase, C-terminal domain
1 1 1 0 SCOP 48024 N-terminal domain of DnaB helicase
1 1 1 1 SCOP 158832 Tex N-terminal region-like
1 1 1 1 SCOP 48592 GroEL equatorial domain-like
1 1 1 1 SCOP 69336 Alpha subunit of glutamate synthase, C-terminal domain
1 1 1 0 SCOP 69279 Phage tail proteins
1 1 1 1 SCOP 56712 Prokaryotic type I DNA topoisomerase
1 1 1 1 SCOP 51690 Nicotinate/Quinolinate PRTase C-terminal domain-like
1 1 1 0 SCOP 82093 Heme chaperone CcmE
1 1 1 0 SCOP 57938 DnaJ/Hsp40 cysteine-rich domain
1 1 1 1 SCOP 142823 ComB-like
1 1 1 0 SCOP 50370 Ricin B-like lectins
1 1 1 0 SCOP 46906 Ribosomal protein L11, C-terminal domain
1 1 1 0 SCOP 160443 SMR domain-like
1 1 1 1 SCOP 82057 Prokaryotic SH3-related domain
1 1 1 0 SCOP 158587 Jann4075-like
1 1 1 1 SCOP 102645 CoaB-like
1 1 1 1 SCOP 102110 (2r)-phospho-3-sulfolactate synthase ComA
1 1 1 0 SCOP 48537 Phospholipase C/P1 nuclease
1 1 1 0 SCOP 159006 YopX-like
1 1 1 0 SCOP 58104 Methyl-accepting chemotaxis protein (MCP) signaling domain
1 1 1 1 SCOP 54821 Ribosomal protein S3 C-terminal domain
1 1 1 0 SCOP 81573 F1F0 ATP synthase subunit B, membrane domain
1 1 1 0 SCOP 82602 Nuclease A inhibitor (NuiA)
1 1 1 0 SCOP 52935 PK C-terminal domain-like
1 1 1 0 SCOP 160387 NosL/MerB-like
1 1 1 0 SCOP 52009 Phosphohistidine domain
1 1 1 0 SCOP 109635 DnaK suppressor protein DksA, alpha-hairpin domain
1 1 1 0 SCOP 50965 Galactose oxidase, central domain
1 1 1 0 SCOP 118116 DNA mismatch repair protein MutL
1 1 1 0 SCOP 81336 F1F0 ATP synthase subunit A
1 1 1 0 SCOP 47789 C-terminal domain of RNA polymerase alpha subunit
1 1 1 0 SCOP 51344 Epsilon subunit of F1F0-ATP synthase N-terminal domain
1 1 1 0 SCOP 158745 LanC-like
1 1 1 1 SCOP 68923 PEP carboxykinase N-terminal domain
1 1 1 0 SCOP 82679 N-utilization substance G protein NusG, N-terminal domain
1 1 1 0 SCOP 55190 Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain
1 1 1 0 SCOP 49842 TNF-like
1 1 1 0 SCOP 69055 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain
1 1 1 0 SCOP 47090 PGBD-like
1 1 1 0 SCOP 58014 Coiled-coil domain of nucleotide exchange factor GrpE
1 1 1 0 SCOP 63999 Thiamin pyrophosphokinase, catalytic domain
1 1 1 0 SCOP 140753 PG0816-like
1 1 1 0 SCOP 81464 Cytochrome c oxidase subunit II-like, transmembrane region
1 1 1 1 SCOP 161093 MgtE membrane domain-like
1 1 1 0 SCOP 55307 Tubulin C-terminal domain-like
1 1 1 1 SCOP 140990 FtsH protease domain-like
1 1 1 0 SCOP 141673 MOSC N-terminal domain-like
1 1 1 0 SCOP 142984 Nqo1 middle domain-like
1 1 1 0 SCOP 51294 Hedgehog/intein (Hint) domain
1 1 1 0 SCOP 48163 An anticodon-binding domain of class I aminoacyl-tRNA synthetases
1 1 1 1 SCOP 52021 Carbamoyl phosphate synthetase, small subunit N-terminal domain
1 1 1 0 SCOP 48726 Immunoglobulin
1 1 1 0 SCOP 160766 NE1680-like
1 1 1 1 SCOP 52029 GroEL apical domain-like
1 1 1 0 SCOP 54665 CO dehydrogenase molybdoprotein N-domain-like
1 1 1 0 SCOP 81891 Poly A polymerase C-terminal region-like
1 1 1 0 SCOP 68912 Rho N-terminal domain-like
1 1 1 0 SCOP 47979 Iron-dependent repressor protein, dimerization domain
1 1 1 1 SCOP 54810 GMP synthetase C-terminal dimerisation domain
1 1 1 1 SCOP 101904 GyrA/ParC C-terminal domain-like
1 1 1 0 SCOP 57863 ArfGap/RecO-like zinc finger
1 1 1 0 SCOP 47364 Domain of the SRP/SRP receptor G-proteins
1 1 1 0 SCOP 161270 PspA lactotransferrin-binding region
1 1 1 0 SCOP 48300 Ribosomal protein L7/12, oligomerisation (N-terminal) domain
1 1 1 1 SCOP 100920 Heat shock protein 70kD (HSP70), peptide-binding domain
1 1 1 0 SCOP 141322 NfeD domain-like
1 1 1 0 SCOP 55447 CO dehydrogenase flavoprotein C-terminal domain-like
1 1 1 0 SCOP 110997 Sporulation related repeat
1 1 1 0 SCOP 46934 UBA-like
1 1 1 0 SCOP 160240 Cation efflux protein cytoplasmic domain-like
1 1 1 1 SCOP 56327 LDH C-terminal domain-like
1 1 1 0 SCOP 110836 Hypothetical protein SAV1430
1 1 1 0 SCOP 110921 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain
1 1 1 0 SCOP 100879 Lesion bypass DNA polymerase (Y-family), little finger domain
1 1 1 0 SCOP 69075 Glutamyl tRNA-reductase dimerization domain
1 1 1 0 SCOP 63882 MoeA N-terminal region -like
1 1 1 0 SCOP 141259 CarD-like
1 1 1 0 SCOP 47794 Rad51 N-terminal domain-like
1 1 1 0 SCOP 54160 Chromo domain-like
1 1 1 0 SCOP 75420 YhbC-like, N-terminal domain
1 1 1 0 SCOP 81624 N-terminal domain of MutM-like DNA repair proteins
1 1 1 0 SCOP 54752 RecA protein, C-terminal domain
1 1 1 0 SCOP 54782 Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain
1 1 1 0 SCOP 101852 Bacterial fluorinating enzyme, C-terminal domain
1 1 1 0 SCOP 140490 Nqo1C-terminal domain-like
1 1 1 0 SCOP 102735 Trigger factor ribosome-binding domain
1 1 1 0 SCOP 69255 gp5 N-terminal domain-like
1 1 1 0 SCOP 159283 Guanosine diphospho-D-mannose pyrophosphorylase/mannose-6-phosphate isomerase linker domain
1 1 1 0 SCOP 46557 GreA transcript cleavage protein, N-terminal domain
1 1 1 0 SCOP 54675 Nicotinate/Quinolinate PRTase N-terminal domain-like
1 1 1 0 SCOP 49742 PHM/PNGase F
1 1 1 0 SCOP 47807 5' to 3' exonuclease, C-terminal subdomain
1 1 1 1 SCOP 47446 Signal peptide-binding domain
1 1 1 1 SCOP 56542 Substrate-binding domain of HMG-CoA reductase
1 1 1 0 SCOP 54991 Anticodon-binding domain of PheRS
1 1 1 1 SCOP 55271 DNA repair protein MutS, domain I
1 1 1 0 SCOP 102522 Bacterial fluorinating enzyme, N-terminal domain
1 1 1 0 SCOP 57184 Growth factor receptor domain
1 1 1 0 SCOP 55048 Probable ACP-binding domain of malonyl-CoA ACP transacylase
1 1 1 0 SCOP 47928 N-terminal domain of the delta subunit of the F1F0-ATP synthase
1 1 1 1 SCOP 48108 Carbamoyl phosphate synthetase, large subunit connection domain
1 1 1 0 SCOP 100895 Kazal-type serine protease inhibitors
1 1 1 0 SCOP 57362 BPTI-like
1 1 1 1 SCOP 82051 Obg GTP-binding protein N-terminal domain
1 1 1 0 SCOP 143724 PHP14-like
1 1 1 0 SCOP 47672 Transferrin receptor-like dimerisation domain
1 1 1 1 SCOP 142019 Nqo1 FMN-binding domain-like
1 1 1 0 SCOP 55261 GAD domain-like
1 1 1 1 SCOP 64158 2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain
1 1 1 1 SCOP 54747 Ribosomal L11/L12e N-terminal domain
1 1 1 0 SCOP 69742 Glutamyl tRNA-reductase catalytic, N-terminal domain
1 1 1 0 SCOP 75615 Siroheme synthase middle domains-like
1 1 1 0 SCOP 48168 R1 subunit of ribonucleotide reductase, N-terminal domain
1 1 1 1 SCOP 81886 Helical scaffold and wing domains of SecA
1 1 1 0 SCOP 54849 GroEL-intermediate domain like
1 1 1 1 SCOP 56194 Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain
1 1 1 0 SCOP 63862 Thiamin pyrophosphokinase, substrate-binding domain
1 1 1 0 SCOP 52156 Initiation factor IF2/eIF5b, domain 3
1 1 1 0 SCOP 116878 TrmE connector domain
1 1 1 0 SCOP 64586 C-terminal domain of ProRS
1 1 1 0 SCOP 51064 Head domain of nucleotide exchange factor GrpE
1 1 1 0 SCOP 55653 Ribosomal protein L9 C-domain
1 1 1 0 SCOP 55035 NAD-binding domain of HMG-CoA reductase
1 1 1 0 SCOP 101790 Aminomethyltransferase beta-barrel domain
1 1 1 0 SCOP 143517 TRCF domain-like
1 1 1 1 SCOP 101353 Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
1 1 1 0 SCOP 56553 Insert subdomain of RNA polymerase alpha subunit
1 1 1 0 SCOP 63433 Fumarylacetoacetate hydrolase, FAH, N-terminal domain
1 1 1 1 SCOP 47644 Methionine synthase domain
1 1 1 0 SCOP 46929 DNA helicase RuvA subunit, C-terminal domain
1 1 1 0 SCOP 101821 Aminopeptidase/glucanase lid domain
1 1 1 0 SCOP 54364 Translation initiation factor IF3, N-terminal domain
1 1 1 0 SCOP 69705 Transcription factor NusA, N-terminal domain
1 1 1 0 SCOP 158949 Smr-associated domain-like
1 1 1 0 SCOP 53150 DNA repair protein MutS, domain II
1 1 1 0 SCOP 81767 Pre-protein crosslinking domain of SecA
1 1 1 0 SCOP 140356 PPK N-terminal domain-like
1 1 1 0 SCOP 49863 Hyaluronate lyase-like, C-terminal domain
1 1 1 0 SCOP 47802 DNA polymerase beta, N-terminal domain-like
1 1 1 0 SCOP 81799 Putative methyltransferase TM0872, insert domain
1 1 1 0 SCOP 55869 DNA topoisomerase I domain
1 1 1 0 SCOP 160996 HI0933 insert domain-like
1 1 1 0 SCOP 57770 Methionyl-tRNA synthetase (MetRS), Zn-domain

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The following superfamilies have one or more weak hits:

SCOP superfamily Myosin rod fragments
SCOP superfamily CCCH zinc finger
SCOP superfamily Neurotransmitter-gated ion-channel transmembrane pore
SCOP superfamily Subunits of heterodimeric actin filament capping protein Capz
SCOP superfamily AbrB/MazE/MraZ-like
SCOP superfamily Fucose-specific lectin
SCOP superfamily Collagen-binding domain
SCOP superfamily Gametocyte protein Pfg27
SCOP superfamily TorD-like
SCOP superfamily post-HMGL domain-like
SCOP superfamily C-terminal, gelsolin-like domain of Sec23/24
SCOP superfamily beta-sandwich domain of Sec23/24
SCOP superfamily Bacterial aa3 type cytochrome c oxidase subunit IV
SCOP superfamily Mitochondrial cytochrome c oxidase subunit VIa
SCOP superfamily ABC transporter involved in vitamin B12 uptake, BtuC
SCOP superfamily Transmembrane di-heme cytochromes
SCOP superfamily H-NS histone-like proteins
SCOP superfamily Mitotic arrest deficient-like 1, Mad1
SCOP superfamily Cullin homology domain
SCOP superfamily NSP3 homodimer
SCOP superfamily LCCL domain
SCOP superfamily Arp2/3 complex subunits
SCOP superfamily Cell wall binding repeat
SCOP superfamily alpha-ketoacid dehydrogenase kinase, N-terminal domain
SCOP superfamily FAD-dependent thiol oxidase
SCOP superfamily Phase 1 flagellin
SCOP superfamily MTH938-like
SCOP superfamily Tudor/PWWP/MBT
SCOP superfamily Cytolysin/lectin
SCOP superfamily Flagellar transcriptional activator FlhD
SCOP superfamily Type I dockerin domain
SCOP superfamily Bacterial hemolysins
SCOP superfamily XRCC4, C-terminal oligomerization domain
SCOP superfamily Ada DNA repair protein, N-terminal domain (N-Ada 10)
SCOP superfamily RING/U-box
SCOP superfamily beta-beta-alpha zinc fingers
SCOP superfamily Aerolisin/ETX pore-forming domain
SCOP superfamily Leukocidin-like
SCOP superfamily delta-Endotoxin (insectocide), N-terminal domain
SCOP superfamily Diphtheria toxin, middle domain
SCOP superfamily Colicin
SCOP superfamily Prismane protein-like
SCOP superfamily Eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment
SCOP superfamily Baseplate structural protein gp11
SCOP superfamily gp120 core
SCOP superfamily Ribosome inactivating proteins (RIP)
SCOP superfamily Hect, E3 ligase catalytic domain
SCOP superfamily Cell cycle regulatory proteins
SCOP superfamily eIF4e-like
SCOP superfamily CYTH-like phosphatases
SCOP superfamily Formylmethanofuran:tetrahydromethanopterin formyltransferase
SCOP superfamily Heme-binding protein A (HasA)
SCOP superfamily Cdc48 domain 2-like
SCOP superfamily Tubby C-terminal domain-like
SCOP superfamily Isochorismatase-like hydrolases
SCOP superfamily Glycosyl hydrolases family 6, cellulases
SCOP superfamily dUTPase-like
SCOP superfamily An insect antifreeze protein
SCOP superfamily Thermostable phytase (3-phytase)
SCOP superfamily Oncogene products
SCOP superfamily Actin-crosslinking proteins
SCOP superfamily STI-like
SCOP superfamily Periplasmic chaperone C-domain
SCOP superfamily Bacterial adhesins
SCOP superfamily Moesin tail domain
SCOP superfamily Methanol dehydrogenase subunit
SCOP superfamily gene 59 helicase assembly protein
SCOP superfamily Bacterial muramidases
SCOP superfamily Lipovitellin-phosvitin complex, superhelical domain
SCOP superfamily Ras GEF
SCOP superfamily GTPase activation domain, GAP
SCOP superfamily Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain
SCOP superfamily LigA subunit of an aromatic-ring-opening dioxygenase LigAB
SCOP superfamily Di-copper centre-containing domain
SCOP superfamily Annexin
SCOP superfamily SAM/Pointed domain
SCOP superfamily t-snare proteins
SCOP superfamily STAT
SCOP superfamily EF-hand
SCOP superfamily Cytochromes
SCOP superfamily Apolipoprotein
SCOP superfamily Mitochondrial import receptor subunit Tom20
SCOP superfamily VHP, Villin headpiece domain
SCOP superfamily Spectrin repeat
SCOP superfamily Prefoldin
SCOP superfamily MetI-like
SCOP superfamily Photosystem II antenna protein-like
SCOP superfamily Photosystem II reaction center protein I, PsbI
SCOP superfamily SSO1389-like
SCOP superfamily MalF N-terminal region-like
SCOP superfamily FlhC-like
SCOP superfamily EscU C-terminal domain-like
SCOP superfamily BLRF2-like
SCOP superfamily Acetoacetate decarboxylase-like
SCOP superfamily YerB-like
SCOP superfamily AttH-like
SCOP superfamily Lipase chaperone-like
SCOP superfamily Sec63 N-terminal domain-like
SCOP superfamily MtlR-like
SCOP superfamily GINS helical bundle-like
SCOP superfamily Bacillus cereus metalloprotein-like
SCOP superfamily L,D-transpeptidase pre-catalytic domain-like
SCOP superfamily STIV B116-like
SCOP superfamily DOPA-like
SCOP superfamily YefM-like
SCOP superfamily YktB/PF0168-like
SCOP superfamily MFPT repeat-like
SCOP superfamily Hcp1-like
SCOP superfamily PriB N-terminal domain-like
SCOP superfamily USP8 N-terminal domain-like
SCOP superfamily Rv1873-like
SCOP superfamily Mediator hinge subcomplex-like
SCOP superfamily IpaD-like
SCOP superfamily BAS1536-like
SCOP superfamily MW0975(SA0943)-like
SCOP superfamily DNA primase DnaG, C-terminal domain
SCOP superfamily Hook domain
SCOP superfamily Avirulence protein AvrPto
SCOP superfamily XseB-like
SCOP superfamily Coronavirus S2 glycoprotein
SCOP superfamily AF1104-like
SCOP superfamily Rbstp2229 protein
SCOP superfamily Bacillus phage protein
SCOP superfamily HSP90 C-terminal domain
SCOP superfamily Toprim domain
SCOP superfamily Coronavirus RNA-binding domain
SCOP superfamily A middle domain of Talin 1
SCOP superfamily Mannose-6-phosphate receptor binding protein 1 (Tip47), C-terminal domain
SCOP superfamily DEK C-terminal domain
SCOP superfamily BAR/IMD domain-like
SCOP superfamily Obg GTP-binding protein C-terminal domain
SCOP superfamily DNA polymerase III psi subunit
SCOP superfamily AXH domain
SCOP superfamily DNA-binding pseudobarrel domain
SCOP superfamily Hypothetical protein YgiW
SCOP superfamily SspB-like
SCOP superfamily Superantigen MAM
SCOP superfamily KaiA/RbsU domain
SCOP superfamily Docking domain B of the erythromycin polyketide synthase (DEBS)
SCOP superfamily Typo IV secretion system protein TraC
SCOP superfamily Heat shock protein 70kD (HSP70), C-terminal subdomain
SCOP superfamily IP3 receptor type 1 binding core, domain 2
SCOP superfamily Plant proteinase inhibitors

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