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Anaerococcus prevotii DSM 20548 superfamily assignments

Taxonomy
Taxonomy browser entry

Bacteria; Terrabacteria group; Firmicutes; Tissierellia; Tissierellales; Peptoniphilaceae; Anaerococcus; Anaerococcus prevotii; Anaerococcus prevotii DSM 20548

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Fasta format sequences
Domain assignments


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Assignment statistics

Sequences: 1806 total
1269 (70 %) with assignment
326 average length
63 % amino acid coverage
Domains: 1877 total
566 unique superfamilies
350 unique families
293 average length
3.3 average superfamily size
70 % formed by duplication
Domain combinations: 337 domain pairs
712 unique architectures

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Superfamily assignments

Domains

Proteins

Architectures

Families

SCOP link

Superfamilies

199 177 58 8 SCOP 52540 P-loop containing nucleoside triphosphate hydrolases
41 40 16 0 SCOP 46785 "Winged helix" DNA-binding domain
36 28 21 3 SCOP 50249 Nucleic acid-binding proteins
33 32 7 1 SCOP 161098 MetI-like
32 31 17 6 SCOP 51735 NAD(P)-binding Rossmann-fold domains
27 16 6 4 SCOP 53067 Actin-like ATPase domain
27 27 12 4 SCOP 53335 S-adenosyl-L-methionine-dependent methyltransferases
26 25 7 1 SCOP 53850 Periplasmic binding protein-like II
22 22 3 1 SCOP 102114 Radical SAM enzymes
22 21 10 3 SCOP 51445 (Trans)glycosidases
20 20 2 0 SCOP 90123 ABC transporter transmembrane region
19 19 7 2 SCOP 56784 HAD-like
19 15 6 0 SCOP 46689 Homeodomain-like
18 18 6 0 SCOP 47413 lambda repressor-like DNA-binding domains
17 16 8 3 SCOP 51905 FAD/NAD(P)-binding domain
15 14 3 1 SCOP 52833 Thioredoxin-like
15 14 12 5 SCOP 54211 Ribosomal protein S5 domain 2-like
14 14 11 3 SCOP 52374 Nucleotidylyl transferase
14 13 4 0 SCOP 55729 Acyl-CoA N-acyltransferases (Nat)
14 14 8 2 SCOP 55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
13 13 3 0 SCOP 53474 alpha/beta-Hydrolases
12 12 2 3 SCOP 53383 PLP-dependent transferases
12 12 10 1 SCOP 55681 Class II aaRS and biotin synthetases
11 11 2 1 SCOP 52172 CheY-like
10 10 6 7 SCOP 51556 Metallo-dependent hydrolases
10 10 3 2 SCOP 53448 Nucleotide-diphospho-sugar transferases
10 10 2 3 SCOP 53613 Ribokinase-like
10 10 8 3 SCOP 52402 Adenine nucleotide alpha hydrolases-like
10 9 8 0 SCOP 54862 4Fe-4S ferredoxins
10 10 3 1 SCOP 53187 Zn-dependent exopeptidases
10 9 7 2 SCOP 50447 Translation proteins
10 8 4 1 SCOP 51338 Composite domain of metallo-dependent hydrolases
9 9 4 0 SCOP 56300 Metallo-dependent phosphatases
9 9 2 3 SCOP 53756 UDP-Glycosyltransferase/glycogen phosphorylase
9 9 6 2 SCOP 56601 beta-lactamase/transpeptidase-like
9 7 5 0 SCOP 88659 Sigma3 and sigma4 domains of RNA polymerase sigma factors
9 5 4 1 SCOP 54980 EF-G C-terminal domain-like
8 8 5 3 SCOP 52317 Class I glutamine amidotransferase-like
8 8 3 2 SCOP 53271 PRTase-like
8 8 6 4 SCOP 53098 Ribonuclease H-like
8 8 4 1 SCOP 55174 Alpha-L RNA-binding motif
8 8 4 3 SCOP 52096 ClpP/crotonase
8 8 2 1 SCOP 81345 ABC transporter involved in vitamin B12 uptake, BtuC
8 2 2 0 SCOP 49478 Cna protein B-type domain
8 8 2 0 SCOP 46894 C-terminal effector domain of the bipartite response regulators
8 8 3 1 SCOP 53822 Periplasmic binding protein-like I
8 8 1 0 SCOP 50331 MOP-like
7 7 3 3 SCOP 53697 SIS domain
7 7 4 3 SCOP 55120 Pseudouridine synthase
7 6 3 1 SCOP 100950 NagB/RpiA/CoA transferase-like
7 7 1 0 SCOP 103473 MFS general substrate transporter
7 7 4 1 SCOP 54001 Cysteine proteinases
7 7 5 1 SCOP 54631 CBS-domain pair
7 7 1 1 SCOP 118215 Proton glutamate symport protein
7 6 6 1 SCOP 47781 RuvA domain 2-like
7 7 2 2 SCOP 48179 6-phosphogluconate dehydrogenase C-terminal domain-like
7 6 6 1 SCOP 47323 Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
7 7 3 0 SCOP 47384 Homodimeric domain of signal transducing histidine kinase
7 7 2 0 SCOP 51011 Glycosyl hydrolase domain
6 6 4 2 SCOP 56059 Glutathione synthetase ATP-binding domain-like
6 6 1 2 SCOP 51569 Aldolase
6 3 2 4 SCOP 52518 Thiamin diphosphate-binding fold (THDP-binding)
6 6 4 1 SCOP 56281 Metallo-hydrolase/oxidoreductase
6 6 2 1 SCOP 53807 "Helical backbone" metal receptor
6 6 5 0 SCOP 56176 FAD-binding/transporter-associated domain-like
6 6 4 2 SCOP 53623 MurD-like peptide ligases, catalytic domain
6 2 2 0 SCOP 53738 Phosphoglucomutase, first 3 domains
6 6 1 1 SCOP 55031 Bacterial exopeptidase dimerisation domain
6 2 2 0 SCOP 46997 Bacterial immunoglobulin/albumin-binding domains
5 5 3 2 SCOP 53927 Cytidine deaminase-like
5 5 4 1 SCOP 56112 Protein kinase-like (PK-like)
5 5 4 2 SCOP 50104 Translation proteins SH3-like domain
5 5 2 0 SCOP 52218 Flavoproteins
5 5 2 3 SCOP 75217 alpha/beta knot
5 5 2 2 SCOP 51161 Trimeric LpxA-like enzymes
5 4 3 0 SCOP 54637 Thioesterase/thiol ester dehydrase-isomerase
5 5 4 1 SCOP 109604 HD-domain/PDEase-like
5 5 4 1 SCOP 88946 Sigma2 domain of RNA polymerase sigma factors
5 5 5 2 SCOP 52467 DHS-like NAD/FAD-binding domain
5 3 2 0 SCOP 103481 Multidrug resistance efflux transporter EmrE
5 5 3 0 SCOP 53244 MurD-like peptide ligases, peptide-binding domain
5 5 2 1 SCOP 55347 Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
5 4 3 0 SCOP 63380 Riboflavin synthase domain-like
5 5 5 0 SCOP 81653 Calcium ATPase, transduction domain A
4 4 2 2 SCOP 51366 Ribulose-phoshate binding barrel
4 4 4 2 SCOP 64182 DHH phosphoesterases
4 4 2 2 SCOP 47240 Ferritin-like
4 4 1 2 SCOP 82549 DAK1/DegV-like
4 4 4 0 SCOP 52980 Restriction endonuclease-like
4 4 4 0 SCOP 109998 Triger factor/SurA peptide-binding domain-like
4 4 3 0 SCOP 55486 Metalloproteases ("zincins"), catalytic domain
4 4 1 0 SCOP 55811 Nudix
4 4 1 1 SCOP 51395 FMN-linked oxidoreductases
4 3 2 1 SCOP 55469 FMN-dependent nitroreductase-like
4 4 4 2 SCOP 56672 DNA/RNA polymerases
4 4 2 0 SCOP 81296 E set domains
4 4 4 1 SCOP 54534 FKBP-like
4 4 1 2 SCOP 51182 RmlC-like cupins
4 4 3 1 SCOP 55931 Glutamine synthetase/guanido kinase
4 4 4 0 SCOP 89550 PHP domain-like
4 4 2 0 SCOP 55604 Glucose permease domain IIB
4 1 1 1 SCOP 63411 LuxS/MPP-like metallohydrolase
4 3 3 1 SCOP 54814 Prokaryotic type KH domain (KH-domain type II)
4 4 3 0 SCOP 57802 Rubredoxin-like
4 4 4 0 SCOP 55021 ACT-like
4 4 2 1 SCOP 63817 Sortase
4 2 2 1 SCOP 56024 Phospholipase D/nuclease
4 4 4 0 SCOP 46548 alpha-helical ferredoxin
4 2 2 0 SCOP 52777 CoA-dependent acyltransferases
4 4 3 0 SCOP 52343 Ferredoxin reductase-like, C-terminal NADP-linked domain
4 3 3 0 SCOP 81923 Double Clp-N motif
4 2 2 1 SCOP 55973 S-adenosylmethionine synthetase
4 4 4 1 SCOP 81665 Calcium ATPase, transmembrane domain M
4 3 3 0 SCOP 116726 TrkA C-terminal domain-like
4 4 1 1 SCOP 53671 Aspartate/ornithine carbamoyltransferase
4 3 2 1 SCOP 55326 PurM N-terminal domain-like
4 2 2 0 SCOP 49493 HSP40/DnaJ peptide-binding domain
3 3 1 1 SCOP 111331 NAD kinase/diacylglycerol kinase-like
3 3 3 0 SCOP 57716 Glucocorticoid receptor-like (DNA-binding domain)
3 2 2 0 SCOP 56214 4'-phosphopantetheinyl transferase
3 2 2 0 SCOP 47336 ACP-like
3 3 1 3 SCOP 53659 Isocitrate/Isopropylmalate dehydrogenase-like
3 3 1 1 SCOP 89623 Ribose/Galactose isomerase RpiB/AlsB
3 2 2 0 SCOP 81333 F1F0 ATP synthase subunit C
3 3 1 2 SCOP 53633 Carbamate kinase-like
3 3 1 1 SCOP 48557 L-aspartase-like
3 3 3 0 SCOP 52821 Rhodanese/Cell cycle control phosphatase
3 3 2 1 SCOP 53686 Tryptophan synthase beta subunit-like PLP-dependent enzymes
3 3 1 1 SCOP 53720 ALDH-like
3 3 2 1 SCOP 48150 DNA-glycosylase
3 3 2 0 SCOP 48452 TPR-like
3 3 3 0 SCOP 54292 2Fe-2S ferredoxin-like
3 3 3 2 SCOP 51621 Phosphoenolpyruvate/pyruvate domain
3 3 3 0 SCOP 49785 Galactose-binding domain-like
3 2 2 0 SCOP 55008 HMA, heavy metal-associated domain
3 3 2 0 SCOP 52266 SGNH hydrolase
3 3 3 0 SCOP 52954 Class II aaRS ABD-related
3 3 3 3 SCOP 51998 PFL-like glycyl radical enzymes
3 3 3 0 SCOP 46955 Putative DNA-binding domain
3 3 3 1 SCOP 57783 Zinc beta-ribbon
3 3 2 0 SCOP 82771 GIY-YIG endonuclease
3 3 1 0 SCOP 54523 Pili subunits
3 3 3 2 SCOP 81301 Nucleotidyltransferase
3 3 3 1 SCOP 53218 Molybdenum cofactor biosynthesis proteins
3 3 3 1 SCOP 56645 Acyl-CoA dehydrogenase NM domain-like
3 3 3 0 SCOP 55785 PYP-like sensor domain (PAS domain)
3 3 2 0 SCOP 53062 PTS system fructose IIA component-like
3 3 1 0 SCOP 53041 Resolvase-like
3 3 3 0 SCOP 46565 Chaperone J-domain
3 3 3 1 SCOP 47203 Acyl-CoA dehydrogenase C-terminal domain-like
3 3 2 0 SCOP 46589 tRNA-binding arm
3 3 3 0 SCOP 50156 PDZ domain-like
3 1 1 0 SCOP 55979 DNA clamp
3 3 3 1 SCOP 52794 PTS system IIB component-like
3 3 2 1 SCOP 52728 PTS IIb component
3 3 2 1 SCOP 48019 post-AAA+ oligomerization domain-like
3 3 2 1 SCOP 52922 TK C-terminal domain-like
3 2 2 0 SCOP 69360 Cell wall binding repeat
3 3 3 1 SCOP 52009 Phosphohistidine domain
3 3 2 0 SCOP 52440 PreATP-grasp domain
3 3 2 1 SCOP 56042 PurM C-terminal domain-like
3 3 1 2 SCOP 56327 LDH C-terminal domain-like
3 3 3 1 SCOP 50677 ValRS/IleRS/LeuRS editing domain
3 3 3 0 SCOP 81271 TGS-like
3 3 3 0 SCOP 47917 C-terminal domain of alpha and beta subunits of F1 ATP synthase
3 3 1 1 SCOP 101821 Aminopeptidase/glucanase lid domain
2 2 2 0 SCOP 48013 NusB-like
2 2 1 0 SCOP 55594 HPr-like
2 2 1 1 SCOP 53167 Purine and uridine phosphorylases
2 2 1 0 SCOP 57829 Zn-binding ribosomal proteins
2 2 1 1 SCOP 52141 Uracil-DNA glycosylase-like
2 2 1 1 SCOP 53137 Translational machinery components
2 2 2 1 SCOP 55920 Creatinase/aminopeptidase
2 2 1 1 SCOP 53784 Phosphofructokinase
2 2 1 0 SCOP 89447 AbrB/MazE/MraZ-like
2 2 2 1 SCOP 53597 Dihydrofolate reductase-like
2 2 1 1 SCOP 51658 Xylose isomerase-like
2 2 1 0 SCOP 143800 L28p-like
2 2 1 1 SCOP 75620 Release factor
2 2 2 0 SCOP 50129 GroES-like
2 2 2 0 SCOP 109755 PhoU-like
2 2 1 2 SCOP 64484 beta and beta-prime subunits of DNA dependent RNA-polymerase
2 2 2 2 SCOP 55821 YrdC/RibB
2 2 1 1 SCOP 53254 Phosphoglycerate mutase-like
2 2 2 1 SCOP 56235 N-terminal nucleophile aminohydrolases (Ntn hydrolases)
2 1 1 0 SCOP 50985 RCC1/BLIP-II
2 2 2 1 SCOP 51430 NAD(P)-linked oxidoreductase
2 2 2 1 SCOP 56801 Acetyl-CoA synthetase-like
2 2 1 0 SCOP 55315 L30e-like
2 2 2 1 SCOP 50891 Cyclophilin-like
2 2 2 0 SCOP 48317 Acid phosphatase/Vanadium-dependent haloperoxidase
2 2 2 1 SCOP 88723 PIN domain-like
2 2 2 1 SCOP 53328 Formyltransferase
2 2 1 0 SCOP 159468 AtpF-like
2 2 2 0 SCOP 74650 Galactose mutarotase-like
2 2 2 0 SCOP 51306 LexA/Signal peptidase
2 2 1 2 SCOP 52972 ITPase-like
2 2 2 1 SCOP 48208 Six-hairpin glycosidases
2 2 2 1 SCOP 55781 GAF domain-like
2 2 2 0 SCOP 110849 ParB/Sulfiredoxin
2 2 1 0 SCOP 103486 V-type ATP synthase subunit C
2 2 1 1 SCOP 52283 Formate/glycerate dehydrogenase catalytic domain-like
2 2 1 0 SCOP 101960 Stabilizer of iron transporter SufD
2 2 2 1 SCOP 53795 PEP carboxykinase-like
2 2 1 0 SCOP 54593 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
2 2 2 1 SCOP 52255 N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)
2 2 1 0 SCOP 56349 DNA breaking-rejoining enzymes
2 2 1 0 SCOP 54913 GlnB-like
2 2 2 1 SCOP 53955 Lysozyme-like
2 2 2 0 SCOP 50800 PK beta-barrel domain-like
2 2 2 0 SCOP 55826 YbaK/ProRS associated domain
2 2 1 1 SCOP 140478 LemA-like
2 2 2 0 SCOP 55804 Phoshotransferase/anion transport protein
2 2 2 0 SCOP 48295 TrpR-like
2 2 1 1 SCOP 53323 Pyruvate-ferredoxin oxidoreductase, PFOR, domain III
2 2 1 0 SCOP 50037 C-terminal domain of transcriptional repressors
2 2 2 0 SCOP 140683 SP0561-like
2 2 1 1 SCOP 161070 SNF-like
2 2 2 0 SCOP 75138 HprK N-terminal domain-like
2 2 2 1 SCOP 101473 DhaL-like
2 1 1 1 SCOP 53901 Thiolase-like
2 2 2 0 SCOP 55136 Probable bacterial effector-binding domain
2 2 1 0 SCOP 158791 MgtE N-terminal domain-like
2 2 2 1 SCOP 55186 ThrRS/AlaRS common domain
2 2 2 0 SCOP 49401 Bacterial adhesins
2 2 1 0 SCOP 48008 GntR ligand-binding domain-like
2 1 1 0 SCOP 53092 Creatinase/prolidase N-terminal domain
2 2 1 1 SCOP 50465 EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
2 2 2 1 SCOP 56003 Molybdenum cofactor-binding domain
2 1 1 0 SCOP 82866 Multidrug efflux transporter AcrB transmembrane domain
2 2 2 1 SCOP 56712 Prokaryotic type I DNA topoisomerase
2 1 1 0 SCOP 63520 PTS-regulatory domain, PRD
2 2 1 2 SCOP 53223 Aminoacid dehydrogenase-like, N-terminal domain
2 2 2 1 SCOP 56719 Type II DNA topoisomerase
2 2 2 0 SCOP 55658 L9 N-domain-like
2 1 1 0 SCOP 53681 Aspartate/glutamate racemase
2 2 2 1 SCOP 56037 PheT/TilS domain
2 2 1 0 SCOP 51215 Regulatory protein AraC
2 2 2 1 SCOP 48334 DNA repair protein MutS, domain III
2 2 1 1 SCOP 161093 MgtE membrane domain-like
2 2 2 0 SCOP 142984 Nqo1 middle domain-like
2 2 2 0 SCOP 54791 Eukaryotic type KH-domain (KH-domain type I)
2 2 2 0 SCOP 54665 CO dehydrogenase molybdoprotein N-domain-like
2 2 1 0 SCOP 47979 Iron-dependent repressor protein, dimerization domain
2 2 2 1 SCOP 53920 Fe-only hydrogenase
2 2 1 1 SCOP 56425 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
2 2 2 0 SCOP 46600 C-terminal UvrC-binding domain of UvrB
2 2 2 0 SCOP 160964 MalF N-terminal region-like
2 2 1 0 SCOP 63418 MurE/MurF N-terminal domain
2 2 1 0 SCOP 51984 MurCD N-terminal domain
2 2 2 0 SCOP 100879 Lesion bypass DNA polymerase (Y-family), little finger domain
2 2 2 0 SCOP 54768 dsRNA-binding domain-like
2 2 2 0 SCOP 141259 CarD-like
2 1 1 1 SCOP 56053 Ribosomal protein L6
2 2 2 0 SCOP 47741 CO dehydrogenase ISP C-domain like
2 2 2 0 SCOP 55957 Phosphoglucomutase, C-terminal domain
2 2 2 0 SCOP 50615 N-terminal domain of alpha and beta subunits of F1 ATP synthase
2 2 2 1 SCOP 142019 Nqo1 FMN-binding domain-like
2 1 1 0 SCOP 55666 Ribonuclease PH domain 2-like
2 2 1 0 SCOP 160527 V-type ATPase subunit E-like
2 1 1 0 SCOP 56519 Penicillin binding protein dimerisation domain
2 2 1 0 SCOP 160996 HI0933 insert domain-like
1 1 1 1 SCOP 56731 DNA primase core
1 1 1 1 SCOP 81338 Aquaporin-like
1 1 1 0 SCOP 53790 Tetrapyrrole methylase
1 1 1 1 SCOP 74982 Small protein B (SmpB)
1 1 1 1 SCOP 56808 Ribosomal protein L1
1 1 1 1 SCOP 53178 Peptidyl-tRNA hydrolase-like
1 1 1 1 SCOP 47973 Ribosomal protein S7
1 1 1 0 SCOP 46911 Ribosomal protein S18
1 1 1 1 SCOP 75304 Amidase signature (AS) enzymes
1 1 1 1 SCOP 143597 YojJ-like
1 1 1 1 SCOP 56420 Peptide deformylase
1 1 1 1 SCOP 81606 PP2C-like
1 1 1 0 SCOP 142433 CinA-like
1 1 1 1 SCOP 54197 HIT-like
1 1 1 0 SCOP 82607 YbaB-like
1 1 1 0 SCOP 64376 YlxR-like
1 1 1 0 SCOP 89919 Ribosome-binding factor A, RbfA
1 1 1 1 SCOP 54999 Ribosomal protein S10
1 1 1 1 SCOP 52166 Ribosomal protein L4
1 1 1 0 SCOP 54189 Ribosomal proteins S24e, L23 and L15e
1 1 1 1 SCOP 54570 Ribosomal protein S19
1 1 1 1 SCOP 54843 Ribosomal protein L22
1 1 1 1 SCOP 54686 Ribosomal protein L16p/L10e
1 1 1 1 SCOP 50193 Ribosomal protein L14
1 1 1 1 SCOP 55282 RL5-like
1 1 1 1 SCOP 56047 Ribosomal protein S8
1 1 1 1 SCOP 52080 Ribosomal proteins L15p and L18e
1 1 1 0 SCOP 103491 Preprotein translocase SecY subunit
1 1 1 0 SCOP 57840 Ribosomal protein L36
1 1 1 1 SCOP 46946 S13-like H2TH domain
1 1 1 1 SCOP 64263 Prokaryotic ribosomal protein L17
1 1 1 0 SCOP 143034 L35p-like
1 1 1 1 SCOP 74731 Ribosomal protein L20
1 1 1 0 SCOP 69593 Glycerol-3-phosphate (1)-acyltransferase
1 1 1 1 SCOP 141091 L21p-like
1 1 1 0 SCOP 118010 TM1457-like
1 1 1 0 SCOP 110324 Ribosomal L27 protein-like
1 1 1 0 SCOP 51695 PLC-like phosphodiesterases
1 1 1 1 SCOP 53748 Phosphoglycerate kinase
1 1 1 1 SCOP 75625 YebC-like
1 1 1 1 SCOP 82649 SufE/NifU
1 1 1 1 SCOP 47729 IHF-like DNA-binding proteins
1 1 1 0 SCOP 160369 Ribosomal protein L10-like
1 1 1 0 SCOP 46992 Ribosomal protein S20
1 1 1 1 SCOP 55068 Peptide methionine sulfoxide reductase
1 1 1 1 SCOP 52161 Ribosomal protein L13
1 1 1 1 SCOP 47060 S15/NS1 RNA-binding domain
1 1 1 1 SCOP 51351 Triosephosphate isomerase (TIM)
1 1 1 1 SCOP 55194 Ribosome recycling factor, RRF
1 1 1 0 SCOP 54565 Ribosomal protein S16
1 1 1 1 SCOP 51316 Mss4-like
1 1 1 1 SCOP 69765 IpsF-like
1 1 1 1 SCOP 51261 Duplicated hybrid motif
1 1 1 1 SCOP 51283 dUTPase-like
1 1 1 1 SCOP 111337 QueA-like
1 1 1 1 SCOP 51713 tRNA-guanine transglycosylase
1 1 1 0 SCOP 50715 Ribosomal protein L25-like
1 1 1 1 SCOP 51412 Inosine monophosphate dehydrogenase (IMPDH)
1 1 1 1 SCOP 52313 Ribosomal protein S2
1 1 1 1 SCOP 64005 Undecaprenyl diphosphate synthase
1 1 1 0 SCOP 54285 MoaD/ThiS
1 1 1 1 SCOP 142695 RibA-like
1 1 1 1 SCOP 102705 NIF3 (NGG1p interacting factor 3)-like
1 1 1 1 SCOP 55205 EPT/RTPC-like
1 1 1 1 SCOP 55298 YjgF-like
1 1 1 0 SCOP 64307 SirA-like
1 1 1 1 SCOP 52121 Lumazine synthase
1 1 1 1 SCOP 48576 Terpenoid synthases
1 1 1 0 SCOP 55129 Ribosomal protein L30p/L7e
1 1 1 0 SCOP 46561 Ribosomal protein L29 (L29p)
1 1 1 0 SCOP 75169 DsrEFH-like
1 1 1 1 SCOP 56796 Dehydroquinate synthase-like
1 1 1 1 SCOP 51419 PLP-binding barrel
1 1 1 0 SCOP 54995 Ribosomal protein S6
1 1 1 1 SCOP 56104 SAICAR synthase-like
1 1 1 0 SCOP 89957 MTH1187/YkoF-like
1 1 1 0 SCOP 50182 Sm-like ribonucleoproteins
1 1 1 0 SCOP 50475 FMN-binding split barrel
1 1 1 1 SCOP 48256 Citrate synthase
1 1 1 1 SCOP 69500 DTD-like
1 1 1 0 SCOP 52799 (Phosphotyrosine protein) phosphatases II
1 1 1 0 SCOP 51726 UROD/MetE-like
1 1 1 1 SCOP 56634 Heme-dependent catalase-like
1 1 1 0 SCOP 53590 Nucleoside hydrolase
1 1 1 1 SCOP 53649 Alkaline phosphatase-like
1 1 1 1 SCOP 52499 Isochorismatase-like hydrolases
1 1 1 0 SCOP 69572 Activating enzymes of the ubiquitin-like proteins
1 1 1 0 SCOP 57997 Tropomyosin
1 1 1 0 SCOP 56317 Carbon-nitrogen hydrolase
1 1 1 0 SCOP 47819 HRDC-like
1 1 1 0 SCOP 49899 Concanavalin A-like lectins/glucanases
1 1 1 0 SCOP 50044 SH3-domain
1 1 1 0 SCOP 88713 Glycoside hydrolase/deacetylase
1 1 1 0 SCOP 55257 RBP11-like subunits of RNA polymerase
1 1 1 1 SCOP 64153 YjeF N-terminal domain-like
1 1 1 1 SCOP 55909 Pentein
1 1 1 0 SCOP 52788 Phosphotyrosine protein phosphatases I
1 1 1 0 SCOP 63562 RPB6/omega subunit-like
1 1 1 0 SCOP 144091 Rhomboid-like
1 1 1 1 SCOP 55040 Molybdenum cofactor biosynthesis protein C, MoaC
1 1 1 0 SCOP 102405 MCP/YpsA-like
1 1 1 0 SCOP 81324 Voltage-gated potassium channels
1 1 1 0 SCOP 52091 SpoIIaa-like
1 1 1 0 SCOP 51717 Dihydropteroate synthetase-like
1 1 1 1 SCOP 50494 Trypsin-like serine proteases
1 1 1 0 SCOP 143120 YefM-like
1 1 1 0 SCOP 47598 Ribbon-helix-helix
1 1 1 0 SCOP 143011 RelE-like
1 1 1 0 SCOP 52016 LeuD/IlvD-like
1 1 1 0 SCOP 56266 DmpA/ArgJ-like
1 1 1 0 SCOP 51230 Single hybrid motif
1 1 1 0 SCOP 46767 Methylated DNA-protein cysteine methyltransferase, C-terminal domain
1 1 1 1 SCOP 50692 ADC-like
1 1 1 0 SCOP 55166 Hedgehog/DD-peptidase
1 1 1 0 SCOP 53300 vWA-like
1 1 1 1 SCOP 89733 L-sulfolactate dehydrogenase-like
1 1 1 1 SCOP 50118 Cell growth inhibitor/plasmid maintenance toxic component
1 1 1 0 SCOP 55154 CYTH-like phosphatases
1 1 1 1 SCOP 52507 Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
1 1 1 1 SCOP 81340 Clc chloride channel
1 1 1 0 SCOP 51206 cAMP-binding domain-like
1 1 1 0 SCOP 161111 Cation efflux protein transmembrane domain-like
1 1 1 0 SCOP 141000 Glu-tRNAGln amidotransferase C subunit
1 1 1 0 SCOP 116842 XseB-like
1 1 1 1 SCOP 110399 ThiG-like
1 1 1 0 SCOP 54736 ClpS-like
1 1 1 1 SCOP 111304 Recombination protein RecR
1 1 1 0 SCOP 69796 Thymidylate synthase-complementing protein Thy1
1 1 1 1 SCOP 53732 Aconitase iron-sulfur domain
1 1 1 0 SCOP 49879 SMAD/FHA domain
1 1 1 0 SCOP 54518 Tubby C-terminal domain-like
1 1 1 1 SCOP 54111 Urease, gamma-subunit
1 1 1 1 SCOP 51278 Urease, beta-subunit
1 1 1 0 SCOP 69065 RNase III domain-like
1 1 1 1 SCOP 56219 DNase I-like
1 1 1 0 SCOP 55200 Translation initiation factor IF3, C-terminal domain
1 1 1 0 SCOP 82689 Mechanosensitive channel protein MscS (YggB), C-terminal domain
1 1 1 0 SCOP 54975 Acylphosphatase/BLUF domain-like
1 1 1 0 SCOP 160719 gpW/gp25-like
1 1 1 0 SCOP 103084 Holliday junction resolvase RusA
1 1 1 0 SCOP 102829 Cell division protein ZapA-like
1 1 1 1 SCOP 51391 Thiamin phosphate synthase
1 1 1 1 SCOP 144052 Thermophilic metalloprotease-like
1 1 1 0 SCOP 88697 PUA domain-like
1 1 1 0 SCOP 89095 GatB/YqeY motif
1 1 1 0 SCOP 81330 Gated mechanosensitive channel
1 1 1 0 SCOP 101386 all-alpha NTP pyrophosphatases
1 1 1 1 SCOP 52335 Methylglyoxal synthase-like
1 1 1 1 SCOP 143631 ApbE-like
1 1 1 0 SCOP 101262 Methenyltetrahydrofolate cyclohydrolase-like
1 1 1 1 SCOP 56821 Prismane protein-like
1 1 1 0 SCOP 144010 CofE-like
1 1 1 0 SCOP 50814 Lipocalins
1 1 1 1 SCOP 53182 Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase)
1 1 1 0 SCOP 64288 Chorismate lyase-like
1 1 1 1 SCOP 110738 Glycerate kinase I
1 1 1 0 SCOP 110391 GlpP-like
1 1 1 0 SCOP 50486 FMT C-terminal domain-like
1 1 1 0 SCOP 52309 N-(deoxy)ribosyltransferase-like
1 1 1 1 SCOP 51604 Enolase C-terminal domain-like
1 1 1 0 SCOP 75471 YhbY-like
1 1 1 0 SCOP 69754 Ribosome binding protein Y (YfiA homologue)
1 1 1 1 SCOP 48695 Multiheme cytochromes
1 1 1 1 SCOP 110395 CutC-like
1 1 1 1 SCOP 75005 Arabinanase/levansucrase/invertase
1 1 1 0 SCOP 82171 DPP6 N-terminal domain-like
1 1 1 1 SCOP 56091 DNA ligase/mRNA capping enzyme, catalytic domain
1 1 1 0 SCOP 109709 KorB DNA-binding domain-like
1 1 1 0 SCOP 53933 Microbial ribonucleases
1 1 1 0 SCOP 102198 Putative cyclase
1 1 1 0 SCOP 69349 Phage fibre proteins
1 1 1 0 SCOP 52038 Barstar-related
1 1 1 1 SCOP 102546 RbsD-like
1 1 1 0 SCOP 50346 PRC-barrel domain
1 1 1 0 SCOP 160975 AF1531-like
1 1 1 1 SCOP 49367 Superoxide reductase-like
1 1 1 0 SCOP 143437 THUMP domain-like
1 1 1 1 SCOP 52490 Tubulin nucleotide-binding domain-like
1 1 1 0 SCOP 110455 Toprim domain
1 1 1 0 SCOP 56563 Major capsid protein gp5
1 1 1 1 SCOP 141523 L,D-transpeptidase catalytic domain-like
1 1 1 1 SCOP 69864 Argininosuccinate synthetase, C-terminal domain
1 1 1 0 SCOP 55424 FAD/NAD-linked reductases, dimerisation (C-terminal) domain
1 1 1 0 SCOP 48024 N-terminal domain of DnaB helicase
1 1 1 0 SCOP 143865 CorA soluble domain-like
1 1 1 1 SCOP 158832 Tex N-terminal region-like
1 1 1 1 SCOP 48592 GroEL equatorial domain-like
1 1 1 0 SCOP 53706 Formate dehydrogenase/DMSO reductase, domains 1-3
1 1 1 1 SCOP 51690 Nicotinate/Quinolinate PRTase C-terminal domain-like
1 1 1 0 SCOP 51246 Rudiment single hybrid motif
1 1 1 0 SCOP 57938 DnaJ/Hsp40 cysteine-rich domain
1 1 1 0 SCOP 50729 PH domain-like
1 1 1 0 SCOP 55103 FAD-linked oxidases, C-terminal domain
1 1 1 0 SCOP 48619 Phospholipase A2, PLA2
1 1 1 0 SCOP 46973 Enzyme IIa from lactose specific PTS, IIa-lac
1 1 1 0 SCOP 55608 Homing endonucleases
1 1 1 0 SCOP 82114 Riboflavin kinase-like
1 1 1 1 SCOP 46906 Ribosomal protein L11, C-terminal domain
1 1 1 0 SCOP 160443 SMR domain-like
1 1 1 1 SCOP 102645 CoaB-like
1 1 1 0 SCOP 56014 Nitrite and sulphite reductase 4Fe-4S domain-like
1 1 1 0 SCOP 103190 Sensory domain-like
1 1 1 0 SCOP 58104 Methyl-accepting chemotaxis protein (MCP) signaling domain
1 1 1 1 SCOP 54821 Ribosomal protein S3 C-terminal domain
1 1 1 0 SCOP 52935 PK C-terminal domain-like
1 1 1 0 SCOP 118116 DNA mismatch repair protein MutL
1 1 1 0 SCOP 47789 C-terminal domain of RNA polymerase alpha subunit
1 1 1 0 SCOP 51971 Nucleotide-binding domain
1 1 1 0 SCOP 158745 LanC-like
1 1 1 0 SCOP 158472 HAMP domain-like
1 1 1 0 SCOP 82679 N-utilization substance G protein NusG, N-terminal domain
1 1 1 0 SCOP 55190 Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain
1 1 1 0 SCOP 158499 DnaD domain-like
1 1 1 0 SCOP 49373 Invasin/intimin cell-adhesion fragments
1 1 1 1 SCOP 52418 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
1 1 1 0 SCOP 58014 Coiled-coil domain of nucleotide exchange factor GrpE
1 1 1 0 SCOP 55383 Copper amine oxidase, domain N
1 1 1 0 SCOP 63999 Thiamin pyrophosphokinase, catalytic domain
1 1 1 1 SCOP 55307 Tubulin C-terminal domain-like
1 1 1 1 SCOP 140990 FtsH protease domain-like
1 1 1 0 SCOP 57884 Ada DNA repair protein, N-terminal domain (N-Ada 10)
1 1 1 0 SCOP 50621 Alanine racemase C-terminal domain-like
1 1 1 0 SCOP 48163 An anticodon-binding domain of class I aminoacyl-tRNA synthetases
1 1 1 1 SCOP 54826 Enolase N-terminal domain-like
1 1 1 0 SCOP 117074 Hypothetical protein PA1324
1 1 1 1 SCOP 52029 GroEL apical domain-like
1 1 1 0 SCOP 55060 GHMP Kinase, C-terminal domain
1 1 1 0 SCOP 160148 CPE0013-like
1 1 1 0 SCOP 81891 Poly A polymerase C-terminal region-like
1 1 1 0 SCOP 68912 Rho N-terminal domain-like
1 1 1 1 SCOP 101904 GyrA/ParC C-terminal domain-like
1 1 1 0 SCOP 57825 Aspartate carbamoyltransferase, Regulatory-chain, C-terminal domain
1 1 1 0 SCOP 57863 ArfGap/RecO-like zinc finger
1 1 1 0 SCOP 81660 Metal cation-transporting ATPase, ATP-binding domain N
1 1 1 0 SCOP 143548 Serine metabolism enzymes domain
1 1 1 0 SCOP 52279 Beta-D-glucan exohydrolase, C-terminal domain
1 1 1 0 SCOP 47364 Domain of the SRP/SRP receptor G-proteins
1 1 1 0 SCOP 48300 Ribosomal protein L7/12, oligomerisation (N-terminal) domain
1 1 1 1 SCOP 100920 Heat shock protein 70kD (HSP70), peptide-binding domain
1 1 1 0 SCOP 55447 CO dehydrogenase flavoprotein C-terminal domain-like
1 1 1 0 SCOP 55252 C-terminal domain of arginine repressor
1 1 1 0 SCOP 81631 PAP/OAS1 substrate-binding domain
1 1 1 0 SCOP 144083 Magnesium transport protein CorA, transmembrane region
1 1 1 0 SCOP 46934 UBA-like
1 1 1 0 SCOP 160240 Cation efflux protein cytoplasmic domain-like
1 1 1 0 SCOP 47648 Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
1 1 1 0 SCOP 75500 Putative transcriptional regulator TM1602, C-terminal domain
1 1 1 0 SCOP 55945 TATA-box binding protein-like
1 1 1 0 SCOP 52113 BRCT domain
1 1 1 0 SCOP 82861 Mechanosensitive channel protein MscS (YggB), transmembrane region
1 1 1 0 SCOP 47831 Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain
1 1 1 1 SCOP 52413 UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
1 1 1 0 SCOP 117892 Band 7/SPFH domain
1 1 1 0 SCOP 75420 YhbC-like, N-terminal domain
1 1 1 0 SCOP 54752 RecA protein, C-terminal domain
1 1 1 0 SCOP 100934 Heat shock protein 70kD (HSP70), C-terminal subdomain
1 1 1 0 SCOP 140490 Nqo1C-terminal domain-like
1 1 1 0 SCOP 102735 Trigger factor ribosome-binding domain
1 1 1 0 SCOP 54680 Pyrimidine nucleoside phosphorylase C-terminal domain
1 1 1 0 SCOP 46557 GreA transcript cleavage protein, N-terminal domain
1 1 1 0 SCOP 54675 Nicotinate/Quinolinate PRTase N-terminal domain-like
1 1 1 0 SCOP 69189 Penicillin-binding protein associated domain
1 1 1 0 SCOP 55904 Ornithine decarboxylase C-terminal domain
1 1 1 0 SCOP 47807 5' to 3' exonuclease, C-terminal subdomain
1 1 1 1 SCOP 47446 Signal peptide-binding domain
1 1 1 0 SCOP 54991 Anticodon-binding domain of PheRS
1 1 1 0 SCOP 82708 R3H domain
1 1 1 1 SCOP 55271 DNA repair protein MutS, domain I
1 1 1 0 SCOP 69287 Urease metallochaperone UreE, N-terminal domain
1 1 1 0 SCOP 49303 beta-Galactosidase/glucuronidase domain
1 1 1 1 SCOP 82051 Obg GTP-binding protein N-terminal domain
1 1 1 0 SCOP 143724 PHP14-like
1 1 1 0 SCOP 88688 Families 57/38 glycoside transferase middle domain
1 1 1 0 SCOP 55261 GAD domain-like
1 1 1 1 SCOP 54713 Elongation factor Ts (EF-Ts), dimerisation domain
1 1 1 0 SCOP 110942 HSP90 C-terminal domain
1 1 1 1 SCOP 54747 Ribosomal L11/L12e N-terminal domain
1 1 1 0 SCOP 75553 Smc hinge domain
1 1 1 0 SCOP 48168 R1 subunit of ribonucleotide reductase, N-terminal domain
1 1 1 1 SCOP 81886 Helical scaffold and wing domains of SecA
1 1 1 0 SCOP 54849 GroEL-intermediate domain like
1 1 1 1 SCOP 56194 Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain
1 1 1 0 SCOP 63862 Thiamin pyrophosphokinase, substrate-binding domain
1 1 1 0 SCOP 52156 Initiation factor IF2/eIF5b, domain 3
1 1 1 0 SCOP 116878 TrmE connector domain
1 1 1 0 SCOP 51064 Head domain of nucleotide exchange factor GrpE
1 1 1 0 SCOP 55653 Ribosomal protein L9 C-domain
1 1 1 0 SCOP 143517 TRCF domain-like
1 1 1 1 SCOP 101353 Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
1 1 1 0 SCOP 56553 Insert subdomain of RNA polymerase alpha subunit
1 1 1 0 SCOP 46929 DNA helicase RuvA subunit, C-terminal domain
1 1 1 0 SCOP 54893 Aspartate carbamoyltransferase, Regulatory-chain, N-terminal domain
1 1 1 1 SCOP 54364 Translation initiation factor IF3, N-terminal domain
1 1 1 1 SCOP 69705 Transcription factor NusA, N-terminal domain
1 1 1 0 SCOP 53150 DNA repair protein MutS, domain II
1 1 1 1 SCOP 81767 Pre-protein crosslinking domain of SecA
1 1 1 0 SCOP 140356 PPK N-terminal domain-like
1 1 1 0 SCOP 143985 L,D-transpeptidase pre-catalytic domain-like
1 1 1 0 SCOP 81799 Putative methyltransferase TM0872, insert domain
1 1 1 0 SCOP 69737 Urease metallochaperone UreE, C-terminal domain
1 1 1 0 SCOP 82829 MesJ substrate recognition domain-like
1 1 1 0 SCOP 102741 Obg GTP-binding protein C-terminal domain
1 1 1 0 SCOP 46915 Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3
1 1 1 1 SCOP 143856 DeoB insert domain-like

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The following superfamilies have one or more weak hits:

SCOP superfamily Fucose-specific lectin
SCOP superfamily HesB-like domain
SCOP superfamily Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain
SCOP superfamily F1F0 ATP synthase subunit B, membrane domain
SCOP superfamily Cytochrome c oxidase subunit III-like
SCOP superfamily Rad50 coiled-coil Zn hook
SCOP superfamily Chemotaxis phosphatase CheZ
SCOP superfamily Mitotic arrest deficient-like 1, Mad1
SCOP superfamily YhbC-like, C-terminal domain
SCOP superfamily Intermediate filament protein, coiled coil region
SCOP superfamily Phase 1 flagellin
SCOP superfamily Cell-division inhibitor MinC, N-terminal domain
SCOP superfamily Apolipoprotein A-I
SCOP superfamily Bacterial hemolysins
SCOP superfamily Clostridium neurotoxins, "coiled-coil" domain
SCOP superfamily SNARE fusion complex
SCOP superfamily Fibrinogen coiled-coil and central regions
SCOP superfamily RING/U-box
SCOP superfamily Trefoil
SCOP superfamily Outer membrane efflux proteins (OEP)
SCOP superfamily Eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment
SCOP superfamily Serpins
SCOP superfamily Oxidoreductase molybdopterin-binding domain
SCOP superfamily PR-1-like
SCOP superfamily CytB endotoxin-like
SCOP superfamily Origin of replication-binding domain, RBD-like
SCOP superfamily Nucleotide cyclase
SCOP superfamily DNA-binding domain of Mlu1-box binding protein MBP1
SCOP superfamily NTF2-like
SCOP superfamily FAD-linked reductases, C-terminal domain
SCOP superfamily Penicillin-binding protein 2x (pbp-2x), c-terminal domain
SCOP superfamily Methylated DNA-protein cysteine methyltransferase domain
SCOP superfamily Cobalamin (vitamin B12)-dependent enzymes
SCOP superfamily XRCC4, N-terminal domain
SCOP superfamily Sec7 domain
SCOP superfamily ARM repeat
SCOP superfamily DBL homology domain (DH-domain)
SCOP superfamily Apolipophorin-III
SCOP superfamily Rad51 N-terminal domain-like
SCOP superfamily t-snare proteins
SCOP superfamily EF-hand
SCOP superfamily Apolipoprotein
SCOP superfamily Spectrin repeat
SCOP superfamily Prefoldin
SCOP superfamily YfgJ-like
SCOP superfamily Photosystem II antenna protein-like
SCOP superfamily SMI1/KNR4-like
SCOP superfamily YopX-like
SCOP superfamily WSSV envelope protein-like
SCOP superfamily NEAT domain-like
SCOP superfamily BH3980-like
SCOP superfamily TAFH domain-like
SCOP superfamily MPN010-like
SCOP superfamily NOB1 zinc finger-like
SCOP superfamily AMMECR1-like
SCOP superfamily YktB/PF0168-like
SCOP superfamily PhtA domain-like
SCOP superfamily BH3618-like
SCOP superfamily NfeD domain-like
SCOP superfamily Hyaluronidase post-catalytic domain-like
SCOP superfamily MW0975(SA0943)-like
SCOP superfamily ISY1 domain-like
SCOP superfamily Vasodilator-stimulated phosphoprotein, VASP, tetramerisation domain
SCOP superfamily Hypothetical membrane protein Ta0354, soluble domain
SCOP superfamily MIT domain
SCOP superfamily Coronavirus S2 glycoprotein
SCOP superfamily Ammonium transporter
SCOP superfamily Hypothetical protein yfbM
SCOP superfamily Hypothetical protein D-63
SCOP superfamily Bacteriocin immunity protein-like
SCOP superfamily BAR/IMD domain-like
SCOP superfamily G protein-binding domain
SCOP superfamily Mitochondrial carrier
SCOP superfamily Respiratory nitrate reductase 1 gamma chain
SCOP superfamily JAB1/MPN domain
SCOP superfamily PAZ domain
SCOP superfamily Formin homology 2 domain (FH2 domain)
SCOP superfamily C-terminal domain of Ku80
SCOP superfamily SPOC domain-like

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