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Methylobacterium nodulans ORS 2060 superfamily assignments

Taxonomy
Taxonomy browser entry

Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium; Methylobacterium nodulans; Methylobacterium nodulans ORS 2060

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Fasta format sequences
Domain assignments


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Assignment statistics

Sequences: 8308 total
4669 (56 %) with assignment
284 average length
59 % amino acid coverage
Domains: 6741 total
792 unique superfamilies
641 unique families
297 average length
8.5 average superfamily size
88 % formed by duplication
Domain combinations: 548 domain pairs
1430 unique architectures

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Superfamily assignments

Domains

Proteins

Architectures

Families

SCOP link

Superfamilies

365 322 67 9 SCOP 52540 P-loop containing nucleoside triphosphate hydrolases
233 230 31 9 SCOP 51735 NAD(P)-binding Rossmann-fold domains
228 227 22 1 SCOP 46785 "Winged helix" DNA-binding domain
171 171 9 1 SCOP 53850 Periplasmic binding protein-like II
129 122 38 1 SCOP 52172 CheY-like
122 121 18 11 SCOP 53335 S-adenosyl-L-methionine-dependent methyltransferases
121 110 22 0 SCOP 46689 Homeodomain-like
100 100 3 0 SCOP 103473 MFS general substrate transporter
86 82 20 3 SCOP 51905 FAD/NAD(P)-binding domain
86 49 32 1 SCOP 55785 PYP-like sensor domain (PAS domain)
83 79 4 1 SCOP 161098 MetI-like
80 80 44 3 SCOP 55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
70 70 7 7 SCOP 53474 alpha/beta-Hydrolases
63 63 10 4 SCOP 52833 Thioredoxin-like
63 62 6 6 SCOP 53383 PLP-dependent transferases
62 61 9 5 SCOP 53756 UDP-Glycosyltransferase/glycogen phosphorylase
61 61 33 0 SCOP 47384 Homodimeric domain of signal transducing histidine kinase
59 55 14 4 SCOP 53448 Nucleotide-diphospho-sugar transferases
59 20 8 1 SCOP 82693 Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
58 45 18 1 SCOP 48452 TPR-like
56 53 8 2 SCOP 55729 Acyl-CoA N-acyltransferases (Nat)
56 56 10 0 SCOP 47413 lambda repressor-like DNA-binding domains
53 53 4 1 SCOP 53822 Periplasmic binding protein-like I
52 31 10 6 SCOP 52518 Thiamin diphosphate-binding fold (THDP-binding)
48 48 10 2 SCOP 53955 Lysozyme-like
46 46 6 5 SCOP 51182 RmlC-like cupins
45 45 10 0 SCOP 46894 C-terminal effector domain of the bipartite response regulators
44 23 10 1 SCOP 82866 Multidrug efflux transporter AcrB transmembrane domain
41 39 7 4 SCOP 52096 ClpP/crotonase
40 20 8 0 SCOP 82714 Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
39 36 4 4 SCOP 48179 6-phosphogluconate dehydrogenase C-terminal domain-like
38 30 10 2 SCOP 46626 Cytochrome c
37 26 19 3 SCOP 50249 Nucleic acid-binding proteins
37 37 9 4 SCOP 56784 HAD-like
37 32 14 3 SCOP 52402 Adenine nucleotide alpha hydrolases-like
36 32 5 4 SCOP 54637 Thioesterase/thiol ester dehydrase-isomerase
36 27 8 1 SCOP 111369 HlyD-like secretion proteins
35 17 11 0 SCOP 51120 beta-Roll
34 34 6 0 SCOP 51206 cAMP-binding domain-like
33 19 3 2 SCOP 53901 Thiolase-like
32 32 8 4 SCOP 53098 Ribonuclease H-like
32 32 5 1 SCOP 56801 Acetyl-CoA synthetase-like
32 29 18 1 SCOP 55781 GAF domain-like
31 29 5 2 SCOP 54593 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
31 18 5 0 SCOP 103481 Multidrug resistance efflux transporter EmrE
30 20 7 5 SCOP 53067 Actin-like ATPase domain
30 30 11 0 SCOP 54292 2Fe-2S ferredoxin-like
30 29 5 2 SCOP 54909 Dimeric alpha+beta barrel
29 28 5 2 SCOP 50129 GroES-like
29 29 13 2 SCOP 55073 Nucleotide cyclase
28 27 15 4 SCOP 56059 Glutathione synthetase ATP-binding domain-like
28 28 4 5 SCOP 51569 Aldolase
28 28 2 0 SCOP 48008 GntR ligand-binding domain-like
28 28 6 2 SCOP 54373 FAD-linked reductases, C-terminal domain
27 24 15 3 SCOP 51445 (Trans)glycosidases
27 27 3 0 SCOP 48498 Tetracyclin repressor-like, C-terminal domain
27 27 10 2 SCOP 56176 FAD-binding/transporter-associated domain-like
26 26 8 8 SCOP 51556 Metallo-dependent hydrolases
26 26 7 1 SCOP 56349 DNA breaking-rejoining enzymes
25 25 4 3 SCOP 56281 Metallo-hydrolase/oxidoreductase
25 25 6 3 SCOP 102114 Radical SAM enzymes
24 21 15 6 SCOP 54211 Ribosomal protein S5 domain 2-like
24 24 5 2 SCOP 53720 ALDH-like
23 23 5 6 SCOP 51621 Phosphoenolpyruvate/pyruvate domain
23 23 6 3 SCOP 53187 Zn-dependent exopeptidases
23 22 7 0 SCOP 88659 Sigma3 and sigma4 domains of RNA polymerase sigma factors
22 17 6 4 SCOP 100950 NagB/RpiA/CoA transferase-like
22 22 2 0 SCOP 47616 GST C-terminal domain-like
21 18 5 5 SCOP 51161 Trimeric LpxA-like enzymes
21 21 5 1 SCOP 56645 Acyl-CoA dehydrogenase NM domain-like
20 20 7 1 SCOP 52317 Class I glutamine amidotransferase-like
20 15 8 1 SCOP 49503 Cupredoxins
20 20 4 1 SCOP 47203 Acyl-CoA dehydrogenase C-terminal domain-like
19 19 5 1 SCOP 56300 Metallo-dependent phosphatases
19 19 3 2 SCOP 56935 Porins
19 19 9 1 SCOP 54631 CBS-domain pair
19 19 4 1 SCOP 88946 Sigma2 domain of RNA polymerase sigma factors
19 16 6 1 SCOP 51338 Composite domain of metallo-dependent hydrolases
19 14 5 1 SCOP 56003 Molybdenum cofactor-binding domain
19 18 8 1 SCOP 63380 Riboflavin synthase domain-like
18 18 4 0 SCOP 54001 Cysteine proteinases
18 18 11 2 SCOP 56601 beta-lactamase/transpeptidase-like
18 17 6 4 SCOP 52467 DHS-like NAD/FAD-binding domain
17 17 9 3 SCOP 52374 Nucleotidylyl transferase
17 17 3 4 SCOP 47240 Ferritin-like
17 17 10 3 SCOP 54862 4Fe-4S ferredoxins
17 17 5 1 SCOP 55811 Nudix
17 17 7 3 SCOP 52343 Ferredoxin reductase-like, C-terminal NADP-linked domain
17 17 5 1 SCOP 90123 ABC transporter transmembrane region
16 16 3 4 SCOP 53659 Isocitrate/Isopropylmalate dehydrogenase-like
16 16 9 0 SCOP 81296 E set domains
16 16 4 1 SCOP 51306 LexA/Signal peptidase
16 16 5 0 SCOP 55961 Bet v1-like
16 16 5 0 SCOP 141523 L,D-transpeptidase catalytic domain-like
15 15 8 2 SCOP 56112 Protein kinase-like (PK-like)
15 15 3 3 SCOP 52218 Flavoproteins
15 15 3 0 SCOP 52980 Restriction endonuclease-like
15 15 6 2 SCOP 50475 FMN-binding split barrel
15 15 1 1 SCOP 51430 NAD(P)-linked oxidoreductase
15 15 5 0 SCOP 46955 Putative DNA-binding domain
15 15 7 1 SCOP 50494 Trypsin-like serine proteases
14 14 10 2 SCOP 55681 Class II aaRS and biotin synthetases
14 14 7 4 SCOP 56235 N-terminal nucleophile aminohydrolases (Ntn hydrolases)
14 14 5 1 SCOP 52151 FabD/lysophospholipase-like
14 14 1 1 SCOP 89796 CoA-transferase family III (CaiB/BaiF)
14 14 3 1 SCOP 53041 Resolvase-like
14 14 4 0 SCOP 82679 N-utilization substance G protein NusG, N-terminal domain
13 10 10 0 SCOP 55021 ACT-like
13 12 4 0 SCOP 56925 OMPA-like
13 13 5 1 SCOP 55103 FAD-linked oxidases, C-terminal domain
13 13 3 3 SCOP 53223 Aminoacid dehydrogenase-like, N-terminal domain
13 13 1 1 SCOP 55031 Bacterial exopeptidase dimerisation domain
12 12 6 2 SCOP 50104 Translation proteins SH3-like domain
12 12 6 0 SCOP 51126 Pectin lyase-like
12 12 5 2 SCOP 88713 Glycoside hydrolase/deacetylase
12 12 3 1 SCOP 56529 FAH
12 11 9 2 SCOP 50447 Translation proteins
12 12 6 1 SCOP 51230 Single hybrid motif
12 12 8 1 SCOP 50692 ADC-like
12 12 5 1 SCOP 53300 vWA-like
12 12 2 0 SCOP 50331 MOP-like
12 12 1 2 SCOP 51604 Enolase C-terminal domain-like
12 9 4 0 SCOP 50156 PDZ domain-like
12 9 7 1 SCOP 58104 Methyl-accepting chemotaxis protein (MCP) signaling domain
12 12 6 0 SCOP 52129 Caspase-like
12 12 6 1 SCOP 81665 Calcium ATPase, transmembrane domain M
12 11 6 1 SCOP 52440 PreATP-grasp domain
12 12 1 1 SCOP 54826 Enolase N-terminal domain-like
12 12 2 0 SCOP 47741 CO dehydrogenase ISP C-domain like
12 12 6 0 SCOP 81653 Calcium ATPase, transduction domain A
11 11 2 3 SCOP 51658 Xylose isomerase-like
11 11 3 1 SCOP 53686 Tryptophan synthase beta subunit-like PLP-dependent enzymes
11 11 6 1 SCOP 109604 HD-domain/PDEase-like
11 11 4 0 SCOP 110849 ParB/Sulfiredoxin
11 11 5 2 SCOP 50022 ISP domain
11 11 7 1 SCOP 53706 Formate dehydrogenase/DMSO reductase, domains 1-3
11 11 5 2 SCOP 52922 TK C-terminal domain-like
11 11 7 0 SCOP 47090 PGBD-like
11 11 5 3 SCOP 55347 Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
10 10 4 1 SCOP 51395 FMN-linked oxidoreductases
10 10 4 3 SCOP 54427 NTF2-like
10 9 2 2 SCOP 55620 Tetrahydrobiopterin biosynthesis enzymes-like
10 10 4 1 SCOP 69118 AhpD-like
10 7 6 0 SCOP 50341 CheW-like
10 10 3 1 SCOP 103088 OmpA-like
10 10 3 0 SCOP 50346 PRC-barrel domain
10 10 4 1 SCOP 54665 CO dehydrogenase molybdoprotein N-domain-like
10 4 2 1 SCOP 53738 Phosphoglucomutase, first 3 domains
9 9 4 2 SCOP 53271 PRTase-like
9 9 4 0 SCOP 47336 ACP-like
9 9 2 1 SCOP 55469 FMN-dependent nitroreductase-like
9 9 8 0 SCOP 47226 Histidine-containing phosphotransfer domain, HPT domain
9 9 7 1 SCOP 54534 FKBP-like
9 9 1 1 SCOP 51197 Clavaminate synthase-like
9 9 5 0 SCOP 52266 SGNH hydrolase
9 9 3 1 SCOP 52016 LeuD/IlvD-like
9 8 6 1 SCOP 81301 Nucleotidyltransferase
9 9 5 2 SCOP 53218 Molybdenum cofactor biosynthesis proteins
9 9 3 0 SCOP 48295 TrpR-like
9 9 8 1 SCOP 46548 alpha-helical ferredoxin
9 9 4 1 SCOP 55424 FAD/NAD-linked reductases, dimerisation (C-terminal) domain
9 5 4 1 SCOP 54980 EF-G C-terminal domain-like
9 9 7 0 SCOP 158472 HAMP domain-like
9 7 5 1 SCOP 52210 Succinyl-CoA synthetase domains
9 1 1 0 SCOP 101967 Adhesin YadA, collagen-binding domain
8 8 1 4 SCOP 51366 Ribulose-phoshate binding barrel
8 8 6 1 SCOP 55174 Alpha-L RNA-binding motif
8 8 1 2 SCOP 56655 Carbohydrate phosphatase
8 8 3 3 SCOP 52283 Formate/glycerate dehydrogenase catalytic domain-like
8 8 3 1 SCOP 81442 Cytochrome c oxidase subunit I-like
8 8 5 0 SCOP 141868 EAL domain-like
8 8 3 2 SCOP 53807 "Helical backbone" metal receptor
8 8 3 2 SCOP 51679 Bacterial luciferase-like
8 8 4 1 SCOP 56524 Oxidoreductase molybdopterin-binding domain
8 7 4 0 SCOP 141371 PilZ domain-like
8 8 1 0 SCOP 89562 RraA-like
8 8 2 0 SCOP 49265 Fibronectin type III
8 8 3 1 SCOP 56425 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
7 7 5 2 SCOP 53927 Cytidine deaminase-like
7 7 3 3 SCOP 53613 Ribokinase-like
7 7 1 1 SCOP 75304 Amidase signature (AS) enzymes
7 7 5 3 SCOP 55120 Pseudouridine synthase
7 7 3 1 SCOP 53597 Dihydrofolate reductase-like
7 7 4 1 SCOP 75217 alpha/beta knot
7 7 4 1 SCOP 55486 Metalloproteases ("zincins"), catalytic domain
7 7 1 2 SCOP 48557 L-aspartase-like
7 7 2 1 SCOP 51412 Inosine monophosphate dehydrogenase (IMPDH)
7 7 1 1 SCOP 53254 Phosphoglycerate mutase-like
7 7 1 0 SCOP 55298 YjgF-like
7 7 3 1 SCOP 51419 PLP-binding barrel
7 7 2 0 SCOP 49764 HSP20-like chaperones
7 7 3 1 SCOP 50891 Cyclophilin-like
7 7 3 2 SCOP 55931 Glutamine synthetase/guanido kinase
7 7 2 1 SCOP 48264 Cytochrome P450
7 6 3 0 SCOP 81901 HCP-like
7 7 4 0 SCOP 158682 TerB-like
7 7 3 1 SCOP 50800 PK beta-barrel domain-like
7 7 1 1 SCOP 118215 Proton glutamate symport protein
7 6 6 1 SCOP 47781 RuvA domain 2-like
7 7 6 1 SCOP 51011 Glycosyl hydrolase domain
6 6 4 1 SCOP 53790 Tetrapyrrole methylase
6 6 5 2 SCOP 53697 SIS domain
6 6 1 0 SCOP 47729 IHF-like DNA-binding proteins
6 5 3 1 SCOP 52821 Rhodanese/Cell cycle control phosphatase
6 6 4 0 SCOP 51261 Duplicated hybrid motif
6 6 1 1 SCOP 81452 Cytochrome c oxidase subunit III-like
6 6 1 2 SCOP 56796 Dehydroquinate synthase-like
6 6 3 0 SCOP 48371 ARM repeat
6 6 3 2 SCOP 56672 DNA/RNA polymerases
6 6 3 1 SCOP 74650 Galactose mutarotase-like
6 3 2 0 SCOP 49899 Concanavalin A-like lectins/glucanases
6 6 3 2 SCOP 48208 Six-hairpin glycosidases
6 6 2 0 SCOP 81343 Fumarate reductase respiratory complex transmembrane subunits
6 6 4 2 SCOP 81342 Transmembrane di-heme cytochromes
6 6 2 0 SCOP 47598 Ribbon-helix-helix
6 6 1 1 SCOP 49482 Aromatic compound dioxygenase
6 6 4 0 SCOP 117916 Fe-S cluster assembly (FSCA) domain-like
6 4 2 0 SCOP 117856 AF0104/ALDC/Ptd012-like
6 6 3 1 SCOP 69047 Hypothetical protein YjbJ
6 6 5 2 SCOP 88697 PUA domain-like
6 6 1 1 SCOP 55826 YbaK/ProRS associated domain
6 6 3 1 SCOP 103025 Folate-binding domain
6 3 1 1 SCOP 63411 LuxS/MPP-like metallohydrolase
6 6 3 0 SCOP 64288 Chorismate lyase-like
6 6 1 0 SCOP 52309 N-(deoxy)ribosyltransferase-like
6 6 1 1 SCOP 142764 YgbK-like
6 3 3 1 SCOP 56024 Phospholipase D/nuclease
6 6 1 0 SCOP 56563 Major capsid protein gp5
6 6 3 1 SCOP 51246 Rudiment single hybrid motif
6 6 5 1 SCOP 47323 Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
6 4 4 1 SCOP 56014 Nitrite and sulphite reductase 4Fe-4S domain-like
6 6 2 0 SCOP 55447 CO dehydrogenase flavoprotein C-terminal domain-like
6 3 3 0 SCOP 55124 Nitrite/Sulfite reductase N-terminal domain-like
5 5 3 1 SCOP 53167 Purine and uridine phosphorylases
5 5 4 0 SCOP 57716 Glucocorticoid receptor-like (DNA-binding domain)
5 5 3 2 SCOP 53633 Carbamate kinase-like
5 5 1 1 SCOP 48576 Terpenoid synthases
5 5 2 0 SCOP 88723 PIN domain-like
5 5 3 1 SCOP 53328 Formyltransferase
5 5 1 1 SCOP 52499 Isochorismatase-like hydrolases
5 4 3 1 SCOP 54506 Diaminopimelate epimerase-like
5 4 3 0 SCOP 55008 HMA, heavy metal-associated domain
5 5 1 2 SCOP 52768 Arginase/deacetylase
5 5 3 1 SCOP 46458 Globin-like
5 5 2 0 SCOP 55154 CYTH-like phosphatases
5 5 3 1 SCOP 81340 Clc chloride channel
5 5 2 1 SCOP 161111 Cation efflux protein transmembrane domain-like
5 5 2 1 SCOP 53732 Aconitase iron-sulfur domain
5 5 2 1 SCOP 56219 DNase I-like
5 5 1 1 SCOP 143081 BB1717-like
5 5 2 1 SCOP 50998 Quinoprotein alcohol dehydrogenase-like
5 5 3 1 SCOP 52242 Cobalamin (vitamin B12)-binding domain
5 5 4 1 SCOP 52738 Methylesterase CheB, C-terminal domain
5 5 1 0 SCOP 109709 KorB DNA-binding domain-like
5 5 4 1 SCOP 46565 Chaperone J-domain
5 5 1 1 SCOP 52777 CoA-dependent acyltransferases
5 5 2 0 SCOP 63867 MoeA C-terminal domain-like
5 5 4 1 SCOP 53244 MurD-like peptide ligases, peptide-binding domain
5 3 3 0 SCOP 69279 Phage tail proteins
5 5 2 0 SCOP 160113 YegP-like
5 3 3 0 SCOP 69318 Integrin alpha N-terminal domain
5 5 1 0 SCOP 52935 PK C-terminal domain-like
5 4 4 0 SCOP 51971 Nucleotide-binding domain
5 5 4 2 SCOP 53623 MurD-like peptide ligases, catalytic domain
5 4 2 1 SCOP 56042 PurM C-terminal domain-like
5 5 1 1 SCOP 81660 Metal cation-transporting ATPase, ATP-binding domain N
5 4 2 1 SCOP 55326 PurM N-terminal domain-like
5 5 2 0 SCOP 47823 lambda integrase-like, N-terminal domain
5 5 2 1 SCOP 63882 MoeA N-terminal region -like
5 5 2 1 SCOP 143975 IlvD/EDD N-terminal domain-like
5 5 1 0 SCOP 47005 Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
4 4 2 1 SCOP 54197 HIT-like
4 4 3 0 SCOP 69593 Glycerol-3-phosphate (1)-acyltransferase
4 4 3 0 SCOP 109998 Triger factor/SurA peptide-binding domain-like
4 4 2 3 SCOP 48150 DNA-glycosylase
4 4 1 1 SCOP 81345 ABC transporter involved in vitamin B12 uptake, BtuC
4 3 3 0 SCOP 64518 Phase 1 flagellin
4 4 4 0 SCOP 54060 His-Me finger endonucleases
4 4 2 1 SCOP 50685 Barwin-like endoglucanases
4 4 1 1 SCOP 56752 D-aminoacid aminotransferase-like PLP-dependent enzymes
4 4 4 0 SCOP 56317 Carbon-nitrogen hydrolase
4 4 2 1 SCOP 53639 AraD/HMP-PK domain-like
4 4 1 1 SCOP 53056 beta-carbonic anhydrase, cab
4 4 1 1 SCOP 52788 Phosphotyrosine protein phosphatases I
4 4 2 0 SCOP 102712 JAB1/MPN domain
4 4 1 1 SCOP 55331 Tautomerase/MIF
4 4 4 0 SCOP 57783 Zinc beta-ribbon
4 4 1 1 SCOP 54913 GlnB-like
4 4 2 0 SCOP 50952 Soluble quinoprotein glucose dehydrogenase
4 4 2 0 SCOP 56747 Prim-pol domain
4 3 3 1 SCOP 54814 Prokaryotic type KH domain (KH-domain type II)
4 4 2 1 SCOP 50486 FMT C-terminal domain-like
4 4 3 0 SCOP 50199 Staphylococcal nuclease
4 4 1 0 SCOP 48024 N-terminal domain of DnaB helicase
4 4 1 1 SCOP 143865 CorA soluble domain-like
4 4 3 1 SCOP 48019 post-AAA+ oligomerization domain-like
4 4 4 1 SCOP 56719 Type II DNA topoisomerase
4 2 1 0 SCOP 53681 Aspartate/glutamate racemase
4 4 4 1 SCOP 56436 C-type lectin-like
4 4 3 0 SCOP 51215 Regulatory protein AraC
4 4 3 1 SCOP 81464 Cytochrome c oxidase subunit II-like, transmembrane region
4 4 3 0 SCOP 142984 Nqo1 middle domain-like
4 4 1 1 SCOP 50621 Alanine racemase C-terminal domain-like
4 4 1 1 SCOP 54719 Fe,Mn superoxide dismutase (SOD), C-terminal domain
4 4 1 0 SCOP 48163 An anticodon-binding domain of class I aminoacyl-tRNA synthetases
4 4 1 0 SCOP 144083 Magnesium transport protein CorA, transmembrane region
4 4 1 0 SCOP 75516 Pheromone-binding domain of LuxR-like quorum-sensing transcription factors
4 4 2 1 SCOP 52413 UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
4 4 2 0 SCOP 117892 Band 7/SPFH domain
4 4 3 0 SCOP 140490 Nqo1C-terminal domain-like
4 4 3 1 SCOP 142019 Nqo1 FMN-binding domain-like
4 4 1 1 SCOP 54368 Glutamine synthetase, N-terminal domain
4 4 3 0 SCOP 47757 Chemotaxis receptor methyltransferase CheR, N-terminal domain
4 2 2 0 SCOP 49493 HSP40/DnaJ peptide-binding domain
4 4 1 1 SCOP 46609 Fe,Mn superoxide dismutase (SOD), N-terminal domain
4 4 1 0 SCOP 69742 Glutamyl tRNA-reductase catalytic, N-terminal domain
3 3 1 1 SCOP 81338 Aquaporin-like
3 3 2 1 SCOP 81606 PP2C-like
3 2 2 0 SCOP 56214 4'-phosphopantetheinyl transferase
3 3 1 0 SCOP 89447 AbrB/MazE/MraZ-like
3 3 1 1 SCOP 75620 Release factor
3 3 1 1 SCOP 82784 OsmC-like
3 2 2 1 SCOP 51283 dUTPase-like
3 3 1 0 SCOP 89360 HesB-like domain
3 3 2 1 SCOP 142695 RibA-like
3 3 2 0 SCOP 117143 Flagellar hook protein flgE
3 3 3 0 SCOP 50182 Sm-like ribonucleoproteins
3 3 1 0 SCOP 63829 Calcium-dependent phosphotriesterase
3 3 1 0 SCOP 47473 EF-hand
3 3 2 0 SCOP 143744 GlcG-like
3 3 2 0 SCOP 55315 L30e-like
3 3 2 1 SCOP 48256 Citrate synthase
3 3 1 0 SCOP 52799 (Phosphotyrosine protein) phosphatases II
3 3 1 1 SCOP 48317 Acid phosphatase/Vanadium-dependent haloperoxidase
3 3 2 2 SCOP 53649 Alkaline phosphatase-like
3 2 2 1 SCOP 48239 Terpenoid cyclases/Protein prenyltransferases
3 3 1 0 SCOP 50630 Acid proteases
3 2 2 0 SCOP 47819 HRDC-like
3 3 1 2 SCOP 52972 ITPase-like
3 2 2 2 SCOP 48113 Heme-dependent peroxidases
3 1 1 0 SCOP 58113 Apolipoprotein A-I
3 3 1 0 SCOP 103378 2-methylcitrate dehydratase PrpD
3 3 3 0 SCOP 52954 Class II aaRS ABD-related
3 3 2 0 SCOP 52091 SpoIIaa-like
3 3 3 1 SCOP 51717 Dihydropteroate synthetase-like
3 3 3 0 SCOP 54523 Pili subunits
3 3 2 1 SCOP 55166 Hedgehog/DD-peptidase
3 3 2 1 SCOP 56954 Outer membrane efflux proteins (OEP)
3 3 2 0 SCOP 110857 Gamma-glutamyl cyclotransferase-like
3 3 1 0 SCOP 160935 VPA0735-like
3 3 1 1 SCOP 51391 Thiamin phosphate synthase
3 3 1 0 SCOP 51004 C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
3 2 2 0 SCOP 101386 all-alpha NTP pyrophosphatases
3 3 1 0 SCOP 160537 SpoVG-like
3 3 1 0 SCOP 159888 YdhG-like
3 3 1 1 SCOP 143631 ApbE-like
3 3 3 0 SCOP 101801 Surface presentation of antigens (SPOA)
3 3 1 1 SCOP 51703 Cobalamin (vitamin B12)-dependent enzymes
3 2 2 0 SCOP 81593 Nucleotidyltransferase substrate binding subunit/domain
3 3 1 0 SCOP 89807 Dodecin-like
3 3 1 0 SCOP 75708 Chemotaxis phosphatase CheZ
3 3 2 1 SCOP 50465 EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
3 3 1 1 SCOP 52743 Subtilisin-like
3 3 2 0 SCOP 46589 tRNA-binding arm
3 3 1 1 SCOP 48592 GroEL equatorial domain-like
3 1 1 0 SCOP 55979 DNA clamp
3 3 2 1 SCOP 57938 DnaJ/Hsp40 cysteine-rich domain
3 3 2 1 SCOP 81923 Double Clp-N motif
3 3 3 0 SCOP 103190 Sensory domain-like
3 1 1 1 SCOP 55973 S-adenosylmethionine synthetase
3 3 1 0 SCOP 51344 Epsilon subunit of F1F0-ATP synthase N-terminal domain
3 2 2 0 SCOP 116726 TrkA C-terminal domain-like
3 3 2 0 SCOP 51294 Hedgehog/intein (Hint) domain
3 3 1 1 SCOP 52029 GroEL apical domain-like
3 3 2 1 SCOP 143548 Serine metabolism enzymes domain
3 3 1 0 SCOP 46977 Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
3 2 2 0 SCOP 50882 beta-Barrel protease inhibitors
3 3 1 0 SCOP 90002 Hypothetical protein YjiA, C-terminal domain
3 3 1 0 SCOP 160240 Cation efflux protein cytoplasmic domain-like
3 3 3 0 SCOP 141259 CarD-like
3 3 3 1 SCOP 50677 ValRS/IleRS/LeuRS editing domain
3 3 1 1 SCOP 55957 Phosphoglucomutase, C-terminal domain
3 3 3 1 SCOP 81271 TGS-like
3 3 2 0 SCOP 55048 Probable ACP-binding domain of malonyl-CoA ACP transacylase
3 2 2 1 SCOP 55666 Ribonuclease PH domain 2-like
3 3 1 0 SCOP 54849 GroEL-intermediate domain like
3 3 2 0 SCOP 101790 Aminomethyltransferase beta-barrel domain
2 2 2 0 SCOP 48013 NusB-like
2 2 1 0 SCOP 57829 Zn-binding ribosomal proteins
2 2 2 2 SCOP 52141 Uracil-DNA glycosylase-like
2 2 1 1 SCOP 56420 Peptide deformylase
2 2 1 0 SCOP 111331 NAD kinase/diacylglycerol kinase-like
2 2 2 0 SCOP 82607 YbaB-like
2 2 1 1 SCOP 53137 Translational machinery components
2 2 2 1 SCOP 55920 Creatinase/aminopeptidase
2 2 2 1 SCOP 46946 S13-like H2TH domain
2 2 1 0 SCOP 143800 L28p-like
2 2 2 1 SCOP 51695 PLC-like phosphodiesterases
2 2 2 1 SCOP 75625 YebC-like
2 2 1 1 SCOP 82649 SufE/NifU
2 2 1 1 SCOP 50324 Inorganic pyrophosphatase
2 2 1 1 SCOP 51316 Mss4-like
2 2 2 2 SCOP 64484 beta and beta-prime subunits of DNA dependent RNA-polymerase
2 2 2 2 SCOP 51730 FAD-linked oxidoreductase
2 2 2 1 SCOP 55821 YrdC/RibB
2 2 1 1 SCOP 64005 Undecaprenyl diphosphate synthase
2 2 1 0 SCOP 54285 MoaD/ThiS
2 2 1 1 SCOP 55205 EPT/RTPC-like
2 2 1 0 SCOP 55229 Cell division protein MinE topological specificity domain
2 2 1 0 SCOP 82657 BolA-like
2 2 1 1 SCOP 56104 SAICAR synthase-like
2 2 1 2 SCOP 48613 Heme oxygenase-like
2 2 1 1 SCOP 56634 Heme-dependent catalase-like
2 2 1 1 SCOP 56322 ADC synthase
2 2 1 0 SCOP 55248 PCD-like
2 2 2 1 SCOP 53774 Glutaminase/Asparaginase
2 2 2 0 SCOP 57997 Tropomyosin
2 2 2 1 SCOP 82282 Homocysteine S-methyltransferase
2 2 1 1 SCOP 56399 ADP-ribosylation
2 2 1 1 SCOP 101960 Stabilizer of iron transporter SufD
2 2 1 1 SCOP 50090 Electron transport accessory proteins
2 2 2 1 SCOP 102405 MCP/YpsA-like
2 2 2 1 SCOP 53795 PEP carboxykinase-like
2 2 2 0 SCOP 141571 Pentapeptide repeat-like
2 2 1 1 SCOP 56266 DmpA/ArgJ-like
2 2 2 0 SCOP 143100 TTHA1013/TTHA0281-like
2 2 2 0 SCOP 82771 GIY-YIG endonuclease
2 2 2 0 SCOP 89550 PHP domain-like
2 2 1 0 SCOP 55797 PR-1-like
2 2 1 1 SCOP 89733 L-sulfolactate dehydrogenase-like
2 2 2 1 SCOP 52507 Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
2 2 1 0 SCOP 102215 Creatininase
2 2 2 0 SCOP 159501 EreA/ChaN-like
2 2 2 2 SCOP 54736 ClpS-like
2 2 1 0 SCOP 54786 YcfA/nrd intein domain
2 2 2 0 SCOP 49879 SMAD/FHA domain
2 2 1 0 SCOP 50993 Peptidase/esterase 'gauge' domain
2 2 2 0 SCOP 82689 Mechanosensitive channel protein MscS (YggB), C-terminal domain
2 2 1 0 SCOP 54975 Acylphosphatase/BLUF domain-like
2 2 2 0 SCOP 160719 gpW/gp25-like
2 2 1 1 SCOP 82544 GckA/TtuD-like
2 2 1 0 SCOP 140804 YidB-like
2 2 1 1 SCOP 158634 RPA2825-like
2 2 2 0 SCOP 89095 GatB/YqeY motif
2 2 2 1 SCOP 158694 UraD-Like
2 2 1 0 SCOP 102588 LmbE-like
2 2 2 1 SCOP 52335 Methylglyoxal synthase-like
2 2 1 0 SCOP 55804 Phoshotransferase/anion transport protein
2 2 2 0 SCOP 53146 Nitrogenase accessory factor-like
2 2 2 0 SCOP 89155 TorD-like
2 2 1 0 SCOP 103247 TT1751-like
2 2 2 1 SCOP 103501 Respiratory nitrate reductase 1 gamma chain
2 2 2 0 SCOP 103039 CheC-like
2 2 1 0 SCOP 142906 YjbR-like
2 2 1 0 SCOP 50974 Nitrous oxide reductase, N-terminal domain
2 2 1 1 SCOP 160104 Acetoacetate decarboxylase-like
2 2 1 0 SCOP 75005 Arabinanase/levansucrase/invertase
2 2 2 1 SCOP 56091 DNA ligase/mRNA capping enzyme, catalytic domain
2 2 2 0 SCOP 158791 MgtE N-terminal domain-like
2 2 2 0 SCOP 102198 Putative cyclase
2 2 1 1 SCOP 160519 BB2672-like
2 2 2 1 SCOP 55186 ThrRS/AlaRS common domain
2 1 1 0 SCOP 53092 Creatinase/prolidase N-terminal domain
2 2 2 1 SCOP 69336 Alpha subunit of glutamate synthase, C-terminal domain
2 2 2 1 SCOP 56712 Prokaryotic type I DNA topoisomerase
2 2 1 0 SCOP 52200 Toll/Interleukin receptor TIR domain
2 2 1 2 SCOP 51690 Nicotinate/Quinolinate PRTase C-terminal domain-like
2 1 1 0 SCOP 103032 Hypothetical protein YwqG
2 2 2 0 SCOP 48619 Phospholipase A2, PLA2
2 2 2 0 SCOP 54106 LysM domain
2 2 1 0 SCOP 63848 Cell-division inhibitor MinC, C-terminal domain
2 2 2 1 SCOP 52009 Phosphohistidine domain
2 1 1 1 SCOP 48029 FliG
2 2 1 1 SCOP 53671 Aspartate/ornithine carbamoyltransferase
2 2 2 0 SCOP 143968 UbiD C-terminal domain-like
2 2 1 0 SCOP 81585 PsbU/PolX domain-like
2 2 2 0 SCOP 81891 Poly A polymerase C-terminal region-like
2 2 2 1 SCOP 101904 GyrA/ParC C-terminal domain-like
2 2 2 1 SCOP 100920 Heat shock protein 70kD (HSP70), peptide-binding domain
2 2 2 0 SCOP 46600 C-terminal UvrC-binding domain of UvrB
2 2 2 0 SCOP 110997 Sporulation related repeat
2 2 1 0 SCOP 63418 MurE/MurF N-terminal domain
2 2 2 0 SCOP 54768 dsRNA-binding domain-like
2 2 2 0 SCOP 82861 Mechanosensitive channel protein MscS (YggB), transmembrane region
2 1 1 1 SCOP 56053 Ribosomal protein L6
2 2 1 1 SCOP 54675 Nicotinate/Quinolinate PRTase N-terminal domain-like
2 1 1 0 SCOP 117987 CRISPR-associated protein
2 2 1 1 SCOP 50615 N-terminal domain of alpha and beta subunits of F1 ATP synthase
2 2 2 0 SCOP 69287 Urease metallochaperone UreE, N-terminal domain
2 1 1 1 SCOP 54713 Elongation factor Ts (EF-Ts), dimerisation domain
2 2 1 1 SCOP 51649 RuBisCo, C-terminal domain
2 2 1 0 SCOP 54966 RuBisCO, large subunit, small (N-terminal) domain
2 2 1 1 SCOP 47917 C-terminal domain of alpha and beta subunits of F1 ATP synthase
2 2 2 0 SCOP 143517 TRCF domain-like
2 2 1 0 SCOP 160467 PH0987 N-terminal domain-like
2 2 2 0 SCOP 69737 Urease metallochaperone UreE, C-terminal domain
2 1 1 1 SCOP 55112 Formylmethanofuran:tetrahydromethanopterin formyltransferase
1 1 1 1 SCOP 56731 DNA primase core
1 1 1 0 SCOP 55594 HPr-like
1 1 1 1 SCOP 74982 Small protein B (SmpB)
1 1 1 1 SCOP 56808 Ribosomal protein L1
1 1 1 1 SCOP 53178 Peptidyl-tRNA hydrolase-like
1 1 1 1 SCOP 47973 Ribosomal protein S7
1 1 1 0 SCOP 46911 Ribosomal protein S18
1 1 1 1 SCOP 142433 CinA-like
1 1 1 0 SCOP 64376 YlxR-like
1 1 1 0 SCOP 89919 Ribosome-binding factor A, RbfA
1 1 1 1 SCOP 54999 Ribosomal protein S10
1 1 1 1 SCOP 52166 Ribosomal protein L4
1 1 1 0 SCOP 54189 Ribosomal proteins S24e, L23 and L15e
1 1 1 1 SCOP 54570 Ribosomal protein S19
1 1 1 1 SCOP 54843 Ribosomal protein L22
1 1 1 1 SCOP 54686 Ribosomal protein L16p/L10e
1 1 1 1 SCOP 50193 Ribosomal protein L14
1 1 1 1 SCOP 55282 RL5-like
1 1 1 1 SCOP 56047 Ribosomal protein S8
1 1 1 1 SCOP 52080 Ribosomal proteins L15p and L18e
1 1 1 0 SCOP 103491 Preprotein translocase SecY subunit
1 1 1 0 SCOP 57840 Ribosomal protein L36
1 1 1 1 SCOP 64263 Prokaryotic ribosomal protein L17
1 1 1 1 SCOP 64182 DHH phosphoesterases
1 1 1 0 SCOP 143034 L35p-like
1 1 1 1 SCOP 74731 Ribosomal protein L20
1 1 1 0 SCOP 53784 Phosphofructokinase
1 1 1 1 SCOP 55831 Thymidylate synthase/dCMP hydroxymethylase
1 1 1 0 SCOP 141091 L21p-like
1 1 1 0 SCOP 110324 Ribosomal L27 protein-like
1 1 1 1 SCOP 53748 Phosphoglycerate kinase
1 1 1 1 SCOP 160369 Ribosomal protein L10-like
1 1 1 0 SCOP 46992 Ribosomal protein S20
1 1 1 1 SCOP 52943 ATP synthase (F1-ATPase), gamma subunit
1 1 1 0 SCOP 81333 F1F0 ATP synthase subunit C
1 1 1 1 SCOP 55068 Peptide methionine sulfoxide reductase
1 1 1 1 SCOP 109755 PhoU-like
1 1 1 1 SCOP 52161 Ribosomal protein L13
1 1 1 1 SCOP 47060 S15/NS1 RNA-binding domain
1 1 1 1 SCOP 51351 Triosephosphate isomerase (TIM)
1 1 1 1 SCOP 55194 Ribosome recycling factor, RRF
1 1 1 0 SCOP 54565 Ribosomal protein S16
1 1 1 1 SCOP 69765 IpsF-like
1 1 1 0 SCOP 54611 SecB-like
1 1 1 1 SCOP 103263 Chorismate synthase, AroC
1 1 1 1 SCOP 111337 QueA-like
1 1 1 1 SCOP 51713 tRNA-guanine transglycosylase
1 1 1 1 SCOP 50715 Ribosomal protein L25-like
1 1 1 1 SCOP 56770 HydA/Nqo6-like
1 1 1 1 SCOP 52313 Ribosomal protein S2
1 1 1 1 SCOP 52304 Type II 3-dehydroquinate dehydratase
1 1 1 0 SCOP 64307 SirA-like
1 1 1 0 SCOP 52121 Lumazine synthase
1 1 1 0 SCOP 55129 Ribosomal protein L30p/L7e
1 1 1 0 SCOP 46561 Ribosomal protein L29 (L29p)
1 1 1 0 SCOP 54995 Ribosomal protein S6
1 1 1 0 SCOP 89957 MTH1187/YkoF-like
1 1 1 0 SCOP 52949 Macro domain-like
1 1 1 0 SCOP 50978 WD40 repeat-like
1 1 1 1 SCOP 102886 Coproporphyrinogen III oxidase
1 1 1 1 SCOP 51726 UROD/MetE-like
1 1 1 0 SCOP 49785 Galactose-binding domain-like
1 1 1 0 SCOP 48403 Ankyrin repeat
1 1 1 0 SCOP 55144 LigT-like
1 1 1 1 SCOP 69572 Activating enzymes of the ubiquitin-like proteins
1 1 1 0 SCOP 57868 Metallothionein
1 1 1 1 SCOP 51645 Malate synthase G
1 1 1 0 SCOP 49329 Cu,Zn superoxide dismutase-like
1 1 1 1 SCOP 54919 Nucleoside diphosphate kinase, NDK
1 1 1 0 SCOP 49777 PEBP-like
1 1 1 0 SCOP 55257 RBP11-like subunits of RNA polymerase
1 1 1 1 SCOP 64153 YjeF N-terminal domain-like
1 1 1 0 SCOP 69618 HemD-like
1 1 1 0 SCOP 52058 L domain-like
1 1 1 1 SCOP 55909 Pentein
1 1 1 0 SCOP 63562 RPB6/omega subunit-like
1 1 1 0 SCOP 53800 Chelatase
1 1 1 1 SCOP 63965 Precorrin-8X methylmutase CbiC/CobH
1 1 1 1 SCOP 141734 HisI-like
1 1 1 1 SCOP 81648 a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
1 1 1 0 SCOP 144091 Rhomboid-like
1 1 1 0 SCOP 111038 YjbQ-like
1 1 1 1 SCOP 55040 Molybdenum cofactor biosynthesis protein C, MoaC
1 1 1 1 SCOP 143243 Nqo5-like
1 1 1 0 SCOP 81324 Voltage-gated potassium channels
1 1 1 0 SCOP 143422 Transposase IS200-like
1 1 1 0 SCOP 103642 Sec-C motif
1 1 1 0 SCOP 51998 PFL-like glycyl radical enzymes
1 1 1 1 SCOP 64438 CNF1/YfiH-like putative cysteine hydrolases
1 1 1 0 SCOP 143120 YefM-like
1 1 1 0 SCOP 118196 YaeB-like
1 1 1 1 SCOP 52255 N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)
1 1 1 0 SCOP 143011 RelE-like
1 1 1 1 SCOP 111352 Ammonium transporter
1 1 1 1 SCOP 142754 NadA-like
1 1 1 1 SCOP 56209 Nitrile hydratase alpha chain
1 1 1 0 SCOP 82697 PurS-like
1 1 1 0 SCOP 160246 EspE N-terminal domain-like
1 1 1 1 SCOP 55083 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK
1 1 1 1 SCOP 46767 Methylated DNA-protein cysteine methyltransferase, C-terminal domain
1 1 1 0 SCOP 50118 Cell growth inhibitor/plasmid maintenance toxic component
1 1 1 1 SCOP 64167 SurE-like
1 1 1 1 SCOP 63892 Pyridoxine 5'-phosphate synthase
1 1 1 1 SCOP 54690 Molybdopterin synthase subunit MoaE
1 1 1 0 SCOP 110710 TTHA0583/YokD-like
1 1 1 0 SCOP 109854 DinB/YfiT-like putative metalloenzymes
1 1 1 0 SCOP 141000 Glu-tRNAGln amidotransferase C subunit
1 1 1 1 SCOP 56762 HydB/Nqo4-like
1 1 1 0 SCOP 116842 XseB-like
1 1 1 1 SCOP 110399 ThiG-like
1 1 1 0 SCOP 88874 Receptor-binding domain of short tail fibre protein gp12
1 1 1 1 SCOP 111304 Recombination protein RecR
1 1 1 1 SCOP 103365 Hypothetical protein PH1602
1 1 1 1 SCOP 54111 Urease, gamma-subunit
1 1 1 1 SCOP 51278 Urease, beta-subunit
1 1 1 1 SCOP 52733 Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT)
1 1 1 0 SCOP 69065 RNase III domain-like
1 1 1 1 SCOP 55200 Translation initiation factor IF3, C-terminal domain
1 1 1 0 SCOP 158997 Trm112p-like
1 1 1 0 SCOP 158442 DsbB-like
1 1 1 0 SCOP 102829 Cell division protein ZapA-like
1 1 1 1 SCOP 143456 VC0467-like
1 1 1 1 SCOP 144052 Thermophilic metalloprotease-like
1 1 1 0 SCOP 50969 YVTN repeat-like/Quinoprotein amine dehydrogenase
1 1 1 1 SCOP 89028 Cobalamin adenosyltransferase-like
1 1 1 0 SCOP 102400 DNA polymerase III chi subunit
1 1 1 0 SCOP 48600 Chorismate mutase II
1 1 1 0 SCOP 109910 YgfY-like
1 1 1 0 SCOP 89392 Prokaryotic lipoproteins and lipoprotein localization factors
1 1 1 0 SCOP 110087 DR1885-like metal-binding protein
1 1 1 0 SCOP 49472 Transthyretin (synonym: prealbumin)
1 1 1 0 SCOP 159664 CobE/GbiG C-terminal domain-like
1 1 1 1 SCOP 160909 ATP12-like
1 1 1 1 SCOP 110069 ApaG-like
1 1 1 0 SCOP 159594 XCC0632-like
1 1 1 1 SCOP 140478 LemA-like
1 1 1 1 SCOP 110581 Indigoidine synthase A-like
1 1 1 0 SCOP 140931 Fic-like
1 1 1 0 SCOP 53323 Pyruvate-ferredoxin oxidoreductase, PFOR, domain III
1 1 1 1 SCOP 101262 Methenyltetrahydrofolate cyclohydrolase-like
1 1 1 0 SCOP 143430 TTP0101/SSO1404-like
1 1 1 0 SCOP 50037 C-terminal domain of transcriptional repressors
1 1 1 1 SCOP 117457 FumA C-terminal domain-like
1 1 1 1 SCOP 56507 Methionine synthase activation domain-like
1 1 1 0 SCOP 53182 Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase)
1 1 1 0 SCOP 53062 PTS system fructose IIA component-like
1 1 1 1 SCOP 111326 Urocanase
1 1 1 1 SCOP 101874 YceI-like
1 1 1 1 SCOP 141130 Acetamidase/Formamidase-like
1 1 1 1 SCOP 101738 SspB-like
1 1 1 0 SCOP 69786 YggU-like
1 1 1 1 SCOP 64076 MTH938-like
1 1 1 0 SCOP 159203 NifT/FixU-like
1 1 1 1 SCOP 159709 PhnH-like
1 1 1 1 SCOP 55846 N-acetylmuramoyl-L-alanine amidase-like
1 1 1 0 SCOP 69754 Ribosome binding protein Y (YfiA homologue)
1 1 1 0 SCOP 50939 Sialidases
1 1 1 0 SCOP 48695 Multiheme cytochromes
1 1 1 1 SCOP 140736 Rv1873-like
1 1 1 0 SCOP 103515 Autotransporter
1 1 1 0 SCOP 74653 TolA/TonB C-terminal domain
1 1 1 0 SCOP 160904 Jann2411-like
1 1 1 0 SCOP 55136 Probable bacterial effector-binding domain
1 1 1 0 SCOP 47592 SWIB/MDM2 domain
1 1 1 1 SCOP 141452 Hcp1-like
1 1 1 0 SCOP 69349 Phage fibre proteins
1 1 1 1 SCOP 160920 PSTPO5379-like
1 1 1 0 SCOP 160975 AF1531-like
1 1 1 1 SCOP 52490 Tubulin nucleotide-binding domain-like
1 1 1 1 SCOP 103165 Ta1353-like
1 1 1 0 SCOP 55895 Ribonuclease Rh-like
1 1 1 1 SCOP 69864 Argininosuccinate synthetase, C-terminal domain
1 1 1 1 SCOP 158832 Tex N-terminal region-like
1 1 1 1 SCOP 82093 Heme chaperone CcmE
1 1 1 1 SCOP 50729 PH domain-like
1 1 1 0 SCOP 101898 NHL repeat
1 1 1 0 SCOP 89372 Fucose-specific lectin
1 1 1 0 SCOP 160214 FlaG-like
1 1 1 0 SCOP 55608 Homing endonucleases
1 1 1 0 SCOP 82114 Riboflavin kinase-like
1 1 1 0 SCOP 46906 Ribosomal protein L11, C-terminal domain
1 1 1 0 SCOP 160443 SMR domain-like
1 1 1 0 SCOP 69304 Tricorn protease N-terminal domain
1 1 1 0 SCOP 82057 Prokaryotic SH3-related domain
1 1 1 0 SCOP 141255 YccV-like
1 1 1 1 SCOP 158757 SMc04008-like
1 1 1 0 SCOP 81469 Bacterial aa3 type cytochrome c oxidase subunit IV
1 1 1 1 SCOP 102645 CoaB-like
1 1 1 0 SCOP 48230 Chondroitin AC/alginate lyase
1 1 1 0 SCOP 49344 CBD9-like
1 1 1 0 SCOP 118352 HSP33 redox switch-like
1 1 1 0 SCOP 160544 EscU C-terminal domain-like
1 1 1 1 SCOP 54821 Ribosomal protein S3 C-terminal domain
1 1 1 0 SCOP 55234 Cyanase C-terminal domain
1 1 1 0 SCOP 109635 DnaK suppressor protein DksA, alpha-hairpin domain
1 1 1 0 SCOP 81995 beta-sandwich domain of Sec23/24
1 1 1 1 SCOP 81935 N-terminal domain of bifunctional PutA protein
1 1 1 0 SCOP 118116 DNA mismatch repair protein MutL
1 1 1 0 SCOP 81336 F1F0 ATP synthase subunit A
1 1 1 0 SCOP 111342 CbiD-like
1 1 1 1 SCOP 56199 Methenyltetrahydromethanopterin cyclohydrolase
1 1 1 1 SCOP 47789 C-terminal domain of RNA polymerase alpha subunit
1 1 1 0 SCOP 90257 Myosin rod fragments
1 1 1 0 SCOP 55658 L9 N-domain-like
1 1 1 1 SCOP 55816 5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain
1 1 1 1 SCOP 68923 PEP carboxykinase N-terminal domain
1 1 1 0 SCOP 55190 Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain
1 1 1 0 SCOP 69055 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain
1 1 1 1 SCOP 56037 PheT/TilS domain
1 1 1 1 SCOP 52418 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
1 1 1 1 SCOP 48334 DNA repair protein MutS, domain III
1 1 1 0 SCOP 58014 Coiled-coil domain of nucleotide exchange factor GrpE
1 1 1 1 SCOP 161093 MgtE membrane domain-like
1 1 1 1 SCOP 55307 Tubulin C-terminal domain-like
1 1 1 1 SCOP 140990 FtsH protease domain-like
1 1 1 1 SCOP 57884 Ada DNA repair protein, N-terminal domain (N-Ada 10)
1 1 1 0 SCOP 52964 TolB, N-terminal domain
1 1 1 0 SCOP 64210 Head-to-tail joining protein W, gpW
1 1 1 1 SCOP 110111 Ctag/Cox11
1 1 1 1 SCOP 52021 Carbamoyl phosphate synthetase, small subunit N-terminal domain
1 1 1 0 SCOP 54791 Eukaryotic type KH-domain (KH-domain type I)
1 1 1 0 SCOP 55060 GHMP Kinase, C-terminal domain
1 1 1 0 SCOP 68912 Rho N-terminal domain-like
1 1 1 1 SCOP 54810 GMP synthetase C-terminal dimerisation domain
1 1 1 0 SCOP 57863 ArfGap/RecO-like zinc finger
1 1 1 0 SCOP 52279 Beta-D-glucan exohydrolase, C-terminal domain
1 1 1 0 SCOP 47364 Domain of the SRP/SRP receptor G-proteins
1 1 1 0 SCOP 161270 PspA lactotransferrin-binding region
1 1 1 0 SCOP 48300 Ribosomal protein L7/12, oligomerisation (N-terminal) domain
1 1 1 0 SCOP 63737 Leukotriene A4 hydrolase N-terminal domain
1 1 1 0 SCOP 141322 NfeD domain-like
1 1 1 0 SCOP 46934 UBA-like
1 1 1 0 SCOP 158544 GspK insert domain-like
1 1 1 0 SCOP 47648 Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
1 1 1 1 SCOP 56327 LDH C-terminal domain-like
1 1 1 0 SCOP 110836 Hypothetical protein SAV1430
1 1 1 0 SCOP 110921 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain
1 1 1 1 SCOP 51984 MurCD N-terminal domain
1 1 1 1 SCOP 48666 Methanol dehydrogenase subunit
1 1 1 0 SCOP 100879 Lesion bypass DNA polymerase (Y-family), little finger domain
1 1 1 0 SCOP 52113 BRCT domain
1 1 1 0 SCOP 47794 Rad51 N-terminal domain-like
1 1 1 0 SCOP 53155 Methylated DNA-protein cysteine methyltransferase domain
1 1 1 0 SCOP 47831 Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain
1 1 1 0 SCOP 74942 YhbC-like, C-terminal domain
1 1 1 0 SCOP 48435 Bacterial muramidases
1 1 1 0 SCOP 75420 YhbC-like, N-terminal domain
1 1 1 0 SCOP 81624 N-terminal domain of MutM-like DNA repair proteins
1 1 1 0 SCOP 54752 RecA protein, C-terminal domain
1 1 1 0 SCOP 100934 Heat shock protein 70kD (HSP70), C-terminal subdomain
1 1 1 0 SCOP 54782 Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain
1 1 1 0 SCOP 102735 Trigger factor ribosome-binding domain
1 1 1 0 SCOP 69255 gp5 N-terminal domain-like
1 1 1 0 SCOP 46557 GreA transcript cleavage protein, N-terminal domain
1 1 1 0 SCOP 69189 Penicillin-binding protein associated domain
1 1 1 1 SCOP 55904 Ornithine decarboxylase C-terminal domain
1 1 1 0 SCOP 47807 5' to 3' exonuclease, C-terminal subdomain
1 1 1 1 SCOP 47446 Signal peptide-binding domain
1 1 1 1 SCOP 64397 Hsp33 domain
1 1 1 0 SCOP 54991 Anticodon-binding domain of PheRS
1 1 1 1 SCOP 55271 DNA repair protein MutS, domain I
1 1 1 0 SCOP 47928 N-terminal domain of the delta subunit of the F1F0-ATP synthase
1 1 1 1 SCOP 48108 Carbamoyl phosphate synthetase, large subunit connection domain
1 1 1 1 SCOP 82051 Obg GTP-binding protein N-terminal domain
1 1 1 0 SCOP 143724 PHP14-like
1 1 1 1 SCOP 140864 TROVE domain-like
1 1 1 0 SCOP 55261 GAD domain-like
1 1 1 0 SCOP 110942 HSP90 C-terminal domain
1 1 1 1 SCOP 54747 Ribosomal L11/L12e N-terminal domain
1 1 1 0 SCOP 75615 Siroheme synthase middle domains-like
1 1 1 1 SCOP 81886 Helical scaffold and wing domains of SecA
1 1 1 0 SCOP 56194 Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain
1 1 1 0 SCOP 52156 Initiation factor IF2/eIF5b, domain 3
1 1 1 0 SCOP 116878 TrmE connector domain
1 1 1 0 SCOP 51064 Head domain of nucleotide exchange factor GrpE
1 1 1 0 SCOP 54585 Cdc48 domain 2-like
1 1 1 0 SCOP 55653 Ribosomal protein L9 C-domain
1 1 1 0 SCOP 75445 D-ribose-5-phosphate isomerase (RpiA), lid domain
1 1 1 1 SCOP 101353 Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
1 1 1 1 SCOP 56553 Insert subdomain of RNA polymerase alpha subunit
1 1 1 0 SCOP 63433 Fumarylacetoacetate hydrolase, FAH, N-terminal domain
1 1 1 1 SCOP 47644 Methionine synthase domain
1 1 1 0 SCOP 46929 DNA helicase RuvA subunit, C-terminal domain
1 1 1 0 SCOP 101821 Aminopeptidase/glucanase lid domain
1 1 1 0 SCOP 54364 Translation initiation factor IF3, N-terminal domain
1 1 1 0 SCOP 69705 Transcription factor NusA, N-terminal domain
1 1 1 0 SCOP 53150 DNA repair protein MutS, domain II
1 1 1 1 SCOP 81767 Pre-protein crosslinking domain of SecA
1 1 1 0 SCOP 140356 PPK N-terminal domain-like
1 1 1 0 SCOP 56519 Penicillin binding protein dimerisation domain
1 1 1 0 SCOP 81799 Putative methyltransferase TM0872, insert domain
1 1 1 0 SCOP 82829 MesJ substrate recognition domain-like
1 1 1 0 SCOP 55869 DNA topoisomerase I domain
1 1 1 0 SCOP 143856 DeoB insert domain-like
1 1 1 0 SCOP 160996 HI0933 insert domain-like

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The following superfamilies have one or more weak hits:

SCOP superfamily Head morphogenesis protein gp7
SCOP superfamily Soluble domain of poliovirus core protein 3a
SCOP superfamily Positive stranded ssRNA viruses
SCOP superfamily DPP6 N-terminal domain-like
SCOP superfamily Photosystem I reaction center subunit XI, PsaL
SCOP superfamily Subunit IX of photosystem I reaction centre, PsaJ
SCOP superfamily Subunit III of photosystem I reaction centre, PsaF
SCOP superfamily ISP transmembrane anchor
SCOP superfamily Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor
SCOP superfamily Bacterial photosystem II reaction centre, L and M subunits
SCOP superfamily Gated mechanosensitive channel
SCOP superfamily Rad50 coiled-coil Zn hook
SCOP superfamily Mitotic arrest deficient-like 1, Mad1
SCOP superfamily Archaeal IMP cyclohydrolase PurO
SCOP superfamily Smc hinge domain
SCOP superfamily Bcr-Abl oncoprotein oligomerization domain
SCOP superfamily PX domain
SCOP superfamily YWTD domain
SCOP superfamily LEM domain
SCOP superfamily RNA polymerase subunits
SCOP superfamily Bacterial hemolysins
SCOP superfamily Variant surface glycoprotein (N-terminal domain)
SCOP superfamily N-terminal coiled coil domain from apc
SCOP superfamily Delta-sleep-inducing peptide immunoreactive peptide
SCOP superfamily Leucine zipper domain
SCOP superfamily TAZ domain
SCOP superfamily Cysteine-rich domain
SCOP superfamily Rubredoxin-like
SCOP superfamily Methionyl-tRNA synthetase (MetRS), Zn-domain
SCOP superfamily Zn2/Cys6 DNA-binding domain
SCOP superfamily Carboxypeptidase inhibitor
SCOP superfamily Antifungal protein (AGAFP)
SCOP superfamily TB module/8-cys domain
SCOP superfamily Growth factor receptor domain
SCOP superfamily Bcl-2 inhibitors of programmed cell death
SCOP superfamily Prismane protein-like
SCOP superfamily SRCR-like
SCOP superfamily Frataxin/Nqo15-like
SCOP superfamily Protease propeptides/inhibitors
SCOP superfamily Cystatin/monellin
SCOP superfamily Carbohydrate binding domain
SCOP superfamily DNA-binding domain of retroviral integrase
SCOP superfamily SH3-domain
SCOP superfamily gp9
SCOP superfamily Cna protein B-type domain
SCOP superfamily Carboxypeptidase regulatory domain-like
SCOP superfamily Starch-binding domain-like
SCOP superfamily Actinoxanthin-like
SCOP superfamily PKD domain
SCOP superfamily Lipovitellin-phosvitin complex, superhelical domain
SCOP superfamily Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain
SCOP superfamily Iron-dependent repressor protein, dimerization domain
SCOP superfamily Apolipophorin-III
SCOP superfamily FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP)
SCOP superfamily Diol dehydratase, gamma subunit
SCOP superfamily HMG-box
SCOP superfamily Protozoan pheromone proteins
SCOP superfamily Tubulin chaperone cofactor A
SCOP superfamily Spectrin repeat
SCOP superfamily CHY zinc finger-like
SCOP superfamily Photosystem II 10 kDa phosphoprotein PsbH
SCOP superfamily MalF N-terminal region-like
SCOP superfamily V-type ATPase subunit E-like
SCOP superfamily BRK domain-like
SCOP superfamily BLRF2-like
SCOP superfamily YdgH-like
SCOP superfamily Dhaf3308-like
SCOP superfamily PSPTO4464-like
SCOP superfamily PRP4-like
SCOP superfamily ImpE-like
SCOP superfamily FdhE-like
SCOP superfamily PF0523-like
SCOP superfamily DOPA-like
SCOP superfamily LD-carboxypeptidase A C-terminal domain-like
SCOP superfamily FHV B2 protein-like
SCOP superfamily HP1531-like
SCOP superfamily Synuclein
SCOP superfamily Variant surface glycoprotein MITAT 1.2, VSG 221, C-terminal domain
SCOP superfamily Vacuolar ATP synthase subunit C
SCOP superfamily D-lysine 5,6-aminomutase beta subunit KamE, N-terminal domain
SCOP superfamily Kelch motif
SCOP superfamily MIT domain
SCOP superfamily DNA methylase specificity domain
SCOP superfamily Mitochondrial ATP synthase coupling factor 6
SCOP superfamily CAPPD, an extracellular domain of amyloid beta A4 protein
SCOP superfamily BAR/IMD domain-like
SCOP superfamily Mitochondrial carrier
SCOP superfamily Roadblock/LC7 domain
SCOP superfamily Holliday junction resolvase RusA
SCOP superfamily Chromosomal protein MC1
SCOP superfamily Peptidyl-tRNA hydrolase II
SCOP superfamily PAZ domain
SCOP superfamily Formin homology 2 domain (FH2 domain)
SCOP superfamily L27 domain
SCOP superfamily XPC-binding domain
SCOP superfamily Docking domain B of the erythromycin polyketide synthase (DEBS)
SCOP superfamily Flagellar export chaperone FliS
SCOP superfamily Staphylocoagulase
SCOP superfamily Translation initiation factor 2 beta, aIF2beta, N-terminal domain

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