SUPERFAMILY 1.75 HMM library and genome assignments server


Lactobacillus helveticus DPC 4571 superfamily assignments

Taxonomy
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Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus; Lactobacillus helveticus; Lactobacillus helveticus DPC 4571

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Domain assignments


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Assignment statistics

Sequences: 1610 total
1085 (67 %) with assignment
317 average length
61 % amino acid coverage
Domains: 1589 total
494 unique superfamilies
329 unique families
289 average length
3.2 average superfamily size
69 % formed by duplication
Domain combinations: 277 domain pairs
594 unique architectures

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Superfamily assignments

Domains

Proteins

Architectures

Families

SCOP link

Superfamilies

173 145 52 8 SCOP 52540 P-loop containing nucleoside triphosphate hydrolases
37 28 18 2 SCOP 50249 Nucleic acid-binding proteins
30 29 14 0 SCOP 46785 "Winged helix" DNA-binding domain
25 25 12 6 SCOP 51735 NAD(P)-binding Rossmann-fold domains
25 25 10 2 SCOP 53098 Ribonuclease H-like
23 23 9 9 SCOP 53335 S-adenosyl-L-methionine-dependent methyltransferases
21 21 4 1 SCOP 161098 MetI-like
21 21 5 1 SCOP 53850 Periplasmic binding protein-like II
20 20 4 4 SCOP 56784 HAD-like
20 11 5 3 SCOP 53067 Actin-like ATPase domain
17 17 3 0 SCOP 47413 lambda repressor-like DNA-binding domains
16 16 2 0 SCOP 103473 MFS general substrate transporter
15 14 5 2 SCOP 53271 PRTase-like
15 15 12 3 SCOP 52374 Nucleotidylyl transferase
15 15 10 4 SCOP 54211 Ribosomal protein S5 domain 2-like
14 14 1 0 SCOP 90123 ABC transporter transmembrane region
13 13 3 2 SCOP 53474 alpha/beta-Hydrolases
13 13 2 4 SCOP 53383 PLP-dependent transferases
13 13 10 1 SCOP 55681 Class II aaRS and biotin synthetases
12 10 7 0 SCOP 46689 Homeodomain-like
12 12 5 1 SCOP 56601 beta-lactamase/transpeptidase-like
11 11 2 1 SCOP 53448 Nucleotide-diphospho-sugar transferases
11 11 2 2 SCOP 55729 Acyl-CoA N-acyltransferases (Nat)
11 11 4 0 SCOP 46955 Putative DNA-binding domain
10 8 5 2 SCOP 56059 Glutathione synthetase ATP-binding domain-like
10 10 7 4 SCOP 51445 (Trans)glycosidases
9 9 4 2 SCOP 52317 Class I glutamine amidotransferase-like
9 8 4 3 SCOP 100950 NagB/RpiA/CoA transferase-like
9 9 2 1 SCOP 53254 Phosphoglycerate mutase-like
9 9 6 1 SCOP 109604 HD-domain/PDEase-like
9 8 8 2 SCOP 50447 Translation proteins
9 9 3 0 SCOP 53041 Resolvase-like
9 7 4 1 SCOP 52440 PreATP-grasp domain
8 7 5 1 SCOP 51905 FAD/NAD(P)-binding domain
8 8 4 1 SCOP 55174 Alpha-L RNA-binding motif
8 8 6 2 SCOP 52402 Adenine nucleotide alpha hydrolases-like
8 8 4 1 SCOP 55486 Metalloproteases ("zincins"), catalytic domain
8 7 5 0 SCOP 55021 ACT-like
8 5 5 1 SCOP 54980 EF-G C-terminal domain-like
8 8 3 0 SCOP 81665 Calcium ATPase, transmembrane domain M
8 8 3 0 SCOP 81653 Calcium ATPase, transduction domain A
7 7 4 3 SCOP 55120 Pseudouridine synthase
7 7 4 1 SCOP 51261 Duplicated hybrid motif
7 7 1 2 SCOP 53756 UDP-Glycosyltransferase/glycogen phosphorylase
7 7 2 1 SCOP 53187 Zn-dependent exopeptidases
7 7 3 1 SCOP 54001 Cysteine proteinases
7 7 5 1 SCOP 55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
7 5 4 0 SCOP 103481 Multidrug resistance efflux transporter EmrE
7 4 2 2 SCOP 53901 Thiolase-like
7 7 4 2 SCOP 53623 MurD-like peptide ligases, catalytic domain
6 6 4 3 SCOP 51556 Metallo-dependent hydrolases
6 6 1 3 SCOP 53613 Ribokinase-like
6 6 2 1 SCOP 52833 Thioredoxin-like
6 6 4 2 SCOP 50104 Translation proteins SH3-like domain
6 6 2 1 SCOP 51161 Trimeric LpxA-like enzymes
6 6 2 0 SCOP 55811 Nudix
6 6 4 2 SCOP 56281 Metallo-hydrolase/oxidoreductase
6 6 3 2 SCOP 74650 Galactose mutarotase-like
6 6 3 1 SCOP 56349 DNA breaking-rejoining enzymes
6 6 3 0 SCOP 48295 TrpR-like
6 6 3 0 SCOP 53244 MurD-like peptide ligases, peptide-binding domain
6 6 6 1 SCOP 47323 Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
6 2 2 0 SCOP 53738 Phosphoglucomutase, first 3 domains
6 6 1 1 SCOP 55031 Bacterial exopeptidase dimerisation domain
5 5 4 0 SCOP 57716 Glucocorticoid receptor-like (DNA-binding domain)
5 5 4 0 SCOP 56300 Metallo-dependent phosphatases
5 5 2 3 SCOP 75217 alpha/beta knot
5 5 3 1 SCOP 52980 Restriction endonuclease-like
5 3 2 0 SCOP 116734 DNA methylase specificity domain
5 3 2 0 SCOP 56024 Phospholipase D/nuclease
5 5 2 3 SCOP 55347 Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
4 4 2 2 SCOP 53927 Cytidine deaminase-like
4 4 3 2 SCOP 64182 DHH phosphoesterases
4 4 1 0 SCOP 52218 Flavoproteins
4 4 2 0 SCOP 47336 ACP-like
4 4 1 1 SCOP 82549 DAK1/DegV-like
4 4 4 2 SCOP 51621 Phosphoenolpyruvate/pyruvate domain
4 3 2 0 SCOP 54637 Thioesterase/thiol ester dehydrase-isomerase
4 4 4 2 SCOP 56235 N-terminal nucleophile aminohydrolases (Ntn hydrolases)
4 4 1 1 SCOP 51430 NAD(P)-linked oxidoreductase
4 4 3 1 SCOP 54534 FKBP-like
4 4 2 0 SCOP 52266 SGNH hydrolase
4 4 1 1 SCOP 52172 CheY-like
4 4 3 4 SCOP 51998 PFL-like glycyl radical enzymes
4 4 1 0 SCOP 143011 RelE-like
4 4 3 2 SCOP 81301 Nucleotidyltransferase
4 4 1 0 SCOP 46894 C-terminal effector domain of the bipartite response regulators
4 4 2 1 SCOP 53822 Periplasmic binding protein-like I
4 3 3 1 SCOP 63411 LuxS/MPP-like metallohydrolase
4 3 3 1 SCOP 54814 Prokaryotic type KH domain (KH-domain type II)
4 4 1 1 SCOP 64288 Chorismate lyase-like
4 4 4 1 SCOP 47781 RuvA domain 2-like
4 4 2 0 SCOP 51246 Rudiment single hybrid motif
4 4 3 0 SCOP 47384 Homodimeric domain of signal transducing histidine kinase
4 4 2 1 SCOP 48019 post-AAA+ oligomerization domain-like
4 4 2 1 SCOP 56719 Type II DNA topoisomerase
4 2 1 0 SCOP 53681 Aspartate/glutamate racemase
4 4 1 1 SCOP 55060 GHMP Kinase, C-terminal domain
3 3 1 0 SCOP 57829 Zn-binding ribosomal proteins
3 3 3 2 SCOP 53697 SIS domain
3 3 2 1 SCOP 55920 Creatinase/aminopeptidase
3 3 1 0 SCOP 69593 Glycerol-3-phosphate (1)-acyltransferase
3 3 1 2 SCOP 48150 DNA-glycosylase
3 3 1 1 SCOP 51412 Inosine monophosphate dehydrogenase (IMPDH)
3 3 1 2 SCOP 52096 ClpP/crotonase
3 3 1 1 SCOP 51395 FMN-linked oxidoreductases
3 3 2 0 SCOP 55315 L30e-like
3 3 1 0 SCOP 52799 (Phosphotyrosine protein) phosphatases II
3 3 1 0 SCOP 48317 Acid phosphatase/Vanadium-dependent haloperoxidase
3 3 3 1 SCOP 49785 Galactose-binding domain-like
3 3 2 0 SCOP 51306 LexA/Signal peptidase
3 3 3 1 SCOP 52954 Class II aaRS ABD-related
3 3 2 0 SCOP 54631 CBS-domain pair
3 3 2 0 SCOP 117916 Fe-S cluster assembly (FSCA) domain-like
3 3 1 1 SCOP 52467 DHS-like NAD/FAD-binding domain
3 3 2 0 SCOP 55826 YbaK/ProRS associated domain
3 3 2 0 SCOP 51338 Composite domain of metallo-dependent hydrolases
3 2 2 0 SCOP 88659 Sigma3 and sigma4 domains of RNA polymerase sigma factors
3 3 2 1 SCOP 52335 Methylglyoxal synthase-like
3 3 2 0 SCOP 140931 Fic-like
3 3 1 0 SCOP 50331 MOP-like
3 3 2 1 SCOP 48179 6-phosphogluconate dehydrogenase C-terminal domain-like
3 3 2 0 SCOP 46589 tRNA-binding arm
3 3 3 0 SCOP 50156 PDZ domain-like
3 1 1 0 SCOP 55979 DNA clamp
3 3 2 1 SCOP 56176 FAD-binding/transporter-associated domain-like
3 3 1 1 SCOP 53223 Aminoacid dehydrogenase-like, N-terminal domain
3 1 1 1 SCOP 55973 S-adenosylmethionine synthetase
3 3 2 0 SCOP 55816 5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain
3 3 2 0 SCOP 158472 HAMP domain-like
3 3 2 0 SCOP 51215 Regulatory protein AraC
3 3 3 1 SCOP 48334 DNA repair protein MutS, domain III
3 2 2 1 SCOP 56042 PurM C-terminal domain-like
3 3 1 0 SCOP 81660 Metal cation-transporting ATPase, ATP-binding domain N
3 2 2 1 SCOP 55326 PurM N-terminal domain-like
3 3 1 1 SCOP 56327 LDH C-terminal domain-like
3 3 3 1 SCOP 50677 ValRS/IleRS/LeuRS editing domain
3 3 3 1 SCOP 81271 TGS-like
3 3 2 1 SCOP 48108 Carbamoyl phosphate synthetase, large subunit connection domain
3 1 1 0 SCOP 54713 Elongation factor Ts (EF-Ts), dimerisation domain
2 2 1 2 SCOP 51569 Aldolase
2 2 2 0 SCOP 48013 NusB-like
2 2 1 1 SCOP 53167 Purine and uridine phosphorylases
2 2 1 1 SCOP 52141 Uracil-DNA glycosylase-like
2 2 1 1 SCOP 56420 Peptide deformylase
2 2 2 1 SCOP 56112 Protein kinase-like (PK-like)
2 2 1 2 SCOP 51366 Ribulose-phoshate binding barrel
2 2 1 1 SCOP 111331 NAD kinase/diacylglycerol kinase-like
2 2 2 1 SCOP 54197 HIT-like
2 2 1 1 SCOP 53137 Translational machinery components
2 2 2 1 SCOP 46946 S13-like H2TH domain
2 2 1 2 SCOP 47240 Ferritin-like
2 2 1 0 SCOP 143800 L28p-like
2 2 1 1 SCOP 75620 Release factor
2 1 1 0 SCOP 52518 Thiamin diphosphate-binding fold (THDP-binding)
2 2 2 0 SCOP 51695 PLC-like phosphodiesterases
2 2 1 2 SCOP 53659 Isocitrate/Isopropylmalate dehydrogenase-like
2 2 2 0 SCOP 109998 Triger factor/SurA peptide-binding domain-like
2 2 2 1 SCOP 53633 Carbamate kinase-like
2 2 1 2 SCOP 64484 beta and beta-prime subunits of DNA dependent RNA-polymerase
2 2 1 1 SCOP 48557 L-aspartase-like
2 2 2 0 SCOP 52821 Rhodanese/Cell cycle control phosphatase
2 2 1 1 SCOP 53686 Tryptophan synthase beta subunit-like PLP-dependent enzymes
2 2 1 0 SCOP 48452 TPR-like
2 2 2 1 SCOP 51419 PLP-binding barrel
2 2 2 1 SCOP 56801 Acetyl-CoA synthetase-like
2 2 1 1 SCOP 55469 FMN-dependent nitroreductase-like
2 2 2 2 SCOP 56672 DNA/RNA polymerases
2 1 1 1 SCOP 51726 UROD/MetE-like
2 2 2 1 SCOP 50891 Cyclophilin-like
2 2 1 1 SCOP 53590 Nucleoside hydrolase
2 2 2 1 SCOP 53328 Formyltransferase
2 2 1 0 SCOP 53649 Alkaline phosphatase-like
2 1 1 0 SCOP 54506 Diaminopimelate epimerase-like
2 2 1 1 SCOP 51182 RmlC-like cupins
2 2 1 1 SCOP 52972 ITPase-like
2 2 2 0 SCOP 110849 ParB/Sulfiredoxin
2 2 2 0 SCOP 52151 FabD/lysophospholipase-like
2 2 2 1 SCOP 52283 Formate/glycerate dehydrogenase catalytic domain-like
2 2 1 0 SCOP 101960 Stabilizer of iron transporter SufD
2 2 2 1 SCOP 55620 Tetrahydrobiopterin biosynthesis enzymes-like
2 2 2 2 SCOP 55931 Glutamine synthetase/guanido kinase
2 2 2 1 SCOP 102405 MCP/YpsA-like
2 1 1 0 SCOP 54909 Dimeric alpha+beta barrel
2 2 2 1 SCOP 57783 Zinc beta-ribbon
2 2 2 0 SCOP 82771 GIY-YIG endonuclease
2 2 1 0 SCOP 53807 "Helical backbone" metal receptor
2 2 2 1 SCOP 88946 Sigma2 domain of RNA polymerase sigma factors
2 2 1 0 SCOP 49503 Cupredoxins
2 2 2 0 SCOP 89550 PHP domain-like
2 2 2 1 SCOP 53955 Lysozyme-like
2 2 2 1 SCOP 69065 RNase III domain-like
2 2 1 0 SCOP 88697 PUA domain-like
2 2 2 1 SCOP 89095 GatB/YqeY motif
2 2 2 0 SCOP 55804 Phoshotransferase/anion transport protein
2 2 2 0 SCOP 55785 PYP-like sensor domain (PAS domain)
2 2 2 1 SCOP 50486 FMT C-terminal domain-like
2 2 1 1 SCOP 52309 N-(deoxy)ribosyltransferase-like
2 2 2 1 SCOP 55186 ThrRS/AlaRS common domain
2 1 1 0 SCOP 49401 Bacterial adhesins
2 2 2 1 SCOP 141523 L,D-transpeptidase catalytic domain-like
2 2 1 0 SCOP 53092 Creatinase/prolidase N-terminal domain
2 2 1 0 SCOP 55424 FAD/NAD-linked reductases, dimerisation (C-terminal) domain
2 1 1 0 SCOP 82866 Multidrug efflux transporter AcrB transmembrane domain
2 2 1 1 SCOP 51690 Nicotinate/Quinolinate PRTase C-terminal domain-like
2 1 1 0 SCOP 54403 Cystatin/monellin
2 2 2 0 SCOP 82057 Prokaryotic SH3-related domain
2 2 2 0 SCOP 63825 YWTD domain
2 2 2 0 SCOP 55658 L9 N-domain-like
2 2 2 0 SCOP 49265 Fibronectin type III
2 2 2 0 SCOP 116726 TrkA C-terminal domain-like
2 2 2 1 SCOP 56037 PheT/TilS domain
2 2 2 0 SCOP 51011 Glycosyl hydrolase domain
2 2 2 2 SCOP 50621 Alanine racemase C-terminal domain-like
2 2 1 1 SCOP 52021 Carbamoyl phosphate synthetase, small subunit N-terminal domain
2 2 1 1 SCOP 101904 GyrA/ParC C-terminal domain-like
2 2 2 0 SCOP 46600 C-terminal UvrC-binding domain of UvrB
2 2 1 0 SCOP 63418 MurE/MurF N-terminal domain
2 2 1 0 SCOP 51984 MurCD N-terminal domain
2 2 2 0 SCOP 54768 dsRNA-binding domain-like
2 2 2 0 SCOP 52113 BRCT domain
2 1 1 1 SCOP 56053 Ribosomal protein L6
2 2 2 0 SCOP 55957 Phosphoglucomutase, C-terminal domain
2 2 1 0 SCOP 46557 GreA transcript cleavage protein, N-terminal domain
2 2 1 1 SCOP 54675 Nicotinate/Quinolinate PRTase N-terminal domain-like
2 2 1 1 SCOP 55904 Ornithine decarboxylase C-terminal domain
2 2 1 0 SCOP 50615 N-terminal domain of alpha and beta subunits of F1 ATP synthase
2 1 1 0 SCOP 49493 HSP40/DnaJ peptide-binding domain
2 2 1 1 SCOP 47917 C-terminal domain of alpha and beta subunits of F1 ATP synthase
1 1 1 1 SCOP 56731 DNA primase core
1 1 1 1 SCOP 81338 Aquaporin-like
1 1 1 1 SCOP 55594 HPr-like
1 1 1 0 SCOP 53790 Tetrapyrrole methylase
1 1 1 1 SCOP 74982 Small protein B (SmpB)
1 1 1 1 SCOP 56808 Ribosomal protein L1
1 1 1 1 SCOP 53178 Peptidyl-tRNA hydrolase-like
1 1 1 1 SCOP 47973 Ribosomal protein S7
1 1 1 0 SCOP 46911 Ribosomal protein S18
1 1 1 1 SCOP 75304 Amidase signature (AS) enzymes
1 1 1 1 SCOP 143597 YojJ-like
1 1 1 1 SCOP 81606 PP2C-like
1 1 1 0 SCOP 82607 YbaB-like
1 1 1 0 SCOP 64376 YlxR-like
1 1 1 0 SCOP 89919 Ribosome-binding factor A, RbfA
1 1 1 1 SCOP 54999 Ribosomal protein S10
1 1 1 1 SCOP 52166 Ribosomal protein L4
1 1 1 0 SCOP 54189 Ribosomal proteins S24e, L23 and L15e
1 1 1 1 SCOP 54570 Ribosomal protein S19
1 1 1 1 SCOP 54843 Ribosomal protein L22
1 1 1 1 SCOP 54686 Ribosomal protein L16p/L10e
1 1 1 1 SCOP 50193 Ribosomal protein L14
1 1 1 1 SCOP 55282 RL5-like
1 1 1 1 SCOP 56047 Ribosomal protein S8
1 1 1 1 SCOP 52080 Ribosomal proteins L15p and L18e
1 1 1 0 SCOP 103491 Preprotein translocase SecY subunit
1 1 1 1 SCOP 64263 Prokaryotic ribosomal protein L17
1 1 1 0 SCOP 143034 L35p-like
1 1 1 1 SCOP 74731 Ribosomal protein L20
1 1 1 0 SCOP 56214 4'-phosphopantetheinyl transferase
1 1 1 1 SCOP 53784 Phosphofructokinase
1 1 1 0 SCOP 89447 AbrB/MazE/MraZ-like
1 1 1 1 SCOP 55831 Thymidylate synthase/dCMP hydroxymethylase
1 1 1 1 SCOP 53597 Dihydrofolate reductase-like
1 1 1 1 SCOP 141091 L21p-like
1 1 1 0 SCOP 110324 Ribosomal L27 protein-like
1 1 1 1 SCOP 53748 Phosphoglycerate kinase
1 1 1 1 SCOP 75625 YebC-like
1 1 1 1 SCOP 82649 SufE/NifU
1 1 1 1 SCOP 47729 IHF-like DNA-binding proteins
1 1 1 1 SCOP 160369 Ribosomal protein L10-like
1 1 1 0 SCOP 50129 GroES-like
1 1 1 1 SCOP 52943 ATP synthase (F1-ATPase), gamma subunit
1 1 1 0 SCOP 81333 F1F0 ATP synthase subunit C
1 1 1 1 SCOP 109755 PhoU-like
1 1 1 1 SCOP 52161 Ribosomal protein L13
1 1 1 1 SCOP 47060 S15/NS1 RNA-binding domain
1 1 1 0 SCOP 82784 OsmC-like
1 1 1 1 SCOP 51351 Triosephosphate isomerase (TIM)
1 1 1 1 SCOP 55194 Ribosome recycling factor, RRF
1 1 1 0 SCOP 54565 Ribosomal protein S16
1 1 1 1 SCOP 51316 Mss4-like
1 1 1 1 SCOP 51730 FAD-linked oxidoreductase
1 1 1 0 SCOP 54611 SecB-like
1 1 1 1 SCOP 55821 YrdC/RibB
1 1 1 1 SCOP 53720 ALDH-like
1 1 1 0 SCOP 51283 dUTPase-like
1 1 1 0 SCOP 89360 HesB-like domain
1 1 1 1 SCOP 52313 Ribosomal protein S2
1 1 1 1 SCOP 64005 Undecaprenyl diphosphate synthase
1 1 1 0 SCOP 102114 Radical SAM enzymes
1 1 1 1 SCOP 102705 NIF3 (NGG1p interacting factor 3)-like
1 1 1 1 SCOP 55205 EPT/RTPC-like
1 1 1 0 SCOP 81345 ABC transporter involved in vitamin B12 uptake, BtuC
1 1 1 0 SCOP 55129 Ribosomal protein L30p/L7e
1 1 1 0 SCOP 46561 Ribosomal protein L29 (L29p)
1 1 1 0 SCOP 54995 Ribosomal protein S6
1 1 1 0 SCOP 49764 HSP20-like chaperones
1 1 1 1 SCOP 56104 SAICAR synthase-like
1 1 1 0 SCOP 50182 Sm-like ribonucleoproteins
1 1 1 0 SCOP 52949 Macro domain-like
1 1 1 0 SCOP 50475 FMN-binding split barrel
1 1 1 0 SCOP 81296 E set domains
1 1 1 1 SCOP 69500 DTD-like
1 1 1 1 SCOP 88723 PIN domain-like
1 1 1 0 SCOP 52499 Isochorismatase-like hydrolases
1 1 1 0 SCOP 48239 Terpenoid cyclases/Protein prenyltransferases
1 1 1 1 SCOP 53774 Glutaminase/Asparaginase
1 1 1 1 SCOP 56752 D-aminoacid aminotransferase-like PLP-dependent enzymes
1 1 1 0 SCOP 56317 Carbon-nitrogen hydrolase
1 1 1 0 SCOP 47819 HRDC-like
1 1 1 0 SCOP 51126 Pectin lyase-like
1 1 1 1 SCOP 48208 Six-hairpin glycosidases
1 1 1 1 SCOP 55781 GAF domain-like
1 1 1 0 SCOP 111126 Ligand-binding domain in the NO signalling and Golgi transport
1 1 1 0 SCOP 82282 Homocysteine S-methyltransferase
1 1 1 0 SCOP 49777 PEBP-like
1 1 1 0 SCOP 55856 Cytochrome b5-like heme/steroid binding domain
1 1 1 0 SCOP 55257 RBP11-like subunits of RNA polymerase
1 1 1 1 SCOP 52788 Phosphotyrosine protein phosphatases I
1 1 1 0 SCOP 63562 RPB6/omega subunit-like
1 1 1 0 SCOP 144091 Rhomboid-like
1 1 1 1 SCOP 101478 ADP-ribosylglycohydrolase
1 1 1 0 SCOP 51069 Carbonic anhydrase
1 1 1 0 SCOP 51717 Dihydropteroate synthetase-like
1 1 1 1 SCOP 53795 PEP carboxykinase-like
1 1 1 0 SCOP 55718 SCP-like
1 1 1 1 SCOP 50494 Trypsin-like serine proteases
1 1 1 0 SCOP 143120 YefM-like
1 1 1 1 SCOP 52255 N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)
1 1 1 1 SCOP 111352 Ammonium transporter
1 1 1 0 SCOP 55331 Tautomerase/MIF
1 1 1 0 SCOP 143100 TTHA1013/TTHA0281-like
1 1 1 0 SCOP 54523 Pili subunits
1 1 1 0 SCOP 82697 PurS-like
1 1 1 0 SCOP 51230 Single hybrid motif
1 1 1 1 SCOP 55083 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK
1 1 1 0 SCOP 46767 Methylated DNA-protein cysteine methyltransferase, C-terminal domain
1 1 1 0 SCOP 55797 PR-1-like
1 1 1 0 SCOP 50118 Cell growth inhibitor/plasmid maintenance toxic component
1 1 1 0 SCOP 55154 CYTH-like phosphatases
1 1 1 0 SCOP 52507 Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
1 1 1 1 SCOP 81340 Clc chloride channel
1 1 1 0 SCOP 161111 Cation efflux protein transmembrane domain-like
1 1 1 0 SCOP 110710 TTHA0583/YokD-like
1 1 1 0 SCOP 54913 GlnB-like
1 1 1 0 SCOP 141000 Glu-tRNAGln amidotransferase C subunit
1 1 1 0 SCOP 116842 XseB-like
1 1 1 0 SCOP 54736 ClpS-like
1 1 1 1 SCOP 111304 Recombination protein RecR
1 1 1 0 SCOP 50800 PK beta-barrel domain-like
1 1 1 0 SCOP 54518 Tubby C-terminal domain-like
1 1 1 1 SCOP 56219 DNase I-like
1 1 1 1 SCOP 55200 Translation initiation factor IF3, C-terminal domain
1 1 1 0 SCOP 143081 BB1717-like
1 1 1 0 SCOP 82689 Mechanosensitive channel protein MscS (YggB), C-terminal domain
1 1 1 0 SCOP 54975 Acylphosphatase/BLUF domain-like
1 1 1 1 SCOP 89028 Cobalamin adenosyltransferase-like
1 1 1 0 SCOP 51004 C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
1 1 1 0 SCOP 81330 Gated mechanosensitive channel
1 1 1 1 SCOP 118215 Proton glutamate symport protein
1 1 1 1 SCOP 140478 LemA-like
1 1 1 0 SCOP 55604 Glucose permease domain IIB
1 1 1 1 SCOP 143631 ApbE-like
1 1 1 0 SCOP 158622 YheA/YmcA-like
1 1 1 0 SCOP 50037 C-terminal domain of transcriptional repressors
1 1 1 0 SCOP 140683 SP0561-like
1 1 1 0 SCOP 50814 Lipocalins
1 1 1 0 SCOP 75138 HprK N-terminal domain-like
1 1 1 1 SCOP 53182 Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase)
1 1 1 1 SCOP 110738 Glycerate kinase I
1 1 1 1 SCOP 142338 CofD-like
1 1 1 0 SCOP 101473 DhaL-like
1 1 1 0 SCOP 53062 PTS system fructose IIA component-like
1 1 1 0 SCOP 63817 Sortase
1 1 1 1 SCOP 51604 Enolase C-terminal domain-like
1 1 1 0 SCOP 55846 N-acetylmuramoyl-L-alanine amidase-like
1 1 1 0 SCOP 69754 Ribosome binding protein Y (YfiA homologue)
1 1 1 1 SCOP 56091 DNA ligase/mRNA capping enzyme, catalytic domain
1 1 1 0 SCOP 109709 KorB DNA-binding domain-like
1 1 1 0 SCOP 46565 Chaperone J-domain
1 1 1 0 SCOP 50346 PRC-barrel domain
1 1 1 1 SCOP 143437 THUMP domain-like
1 1 1 1 SCOP 52490 Tubulin nucleotide-binding domain-like
1 1 1 0 SCOP 110455 Toprim domain
1 1 1 1 SCOP 50465 EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
1 1 1 0 SCOP 48498 Tetracyclin repressor-like, C-terminal domain
1 1 1 0 SCOP 48024 N-terminal domain of DnaB helicase
1 1 1 0 SCOP 143865 CorA soluble domain-like
1 1 1 1 SCOP 48592 GroEL equatorial domain-like
1 1 1 1 SCOP 56712 Prokaryotic type I DNA topoisomerase
1 1 1 0 SCOP 52794 PTS system IIB component-like
1 1 1 0 SCOP 57938 DnaJ/Hsp40 cysteine-rich domain
1 1 1 0 SCOP 81923 Double Clp-N motif
1 1 1 1 SCOP 52728 PTS IIb component
1 1 1 0 SCOP 55608 Homing endonucleases
1 1 1 0 SCOP 82114 Riboflavin kinase-like
1 1 1 1 SCOP 46906 Ribosomal protein L11, C-terminal domain
1 1 1 0 SCOP 160443 SMR domain-like
1 1 1 1 SCOP 102645 CoaB-like
1 1 1 0 SCOP 118352 HSP33 redox switch-like
1 1 1 0 SCOP 54106 LysM domain
1 1 1 0 SCOP 158221 YnzC-like
1 1 1 0 SCOP 103190 Sensory domain-like
1 1 1 0 SCOP 160515 YueI-like
1 1 1 1 SCOP 54821 Ribosomal protein S3 C-terminal domain
1 1 1 0 SCOP 52935 PK C-terminal domain-like
1 1 1 0 SCOP 52009 Phosphohistidine domain
1 1 1 0 SCOP 118116 DNA mismatch repair protein MutL
1 1 1 0 SCOP 158379 YqgQ-like
1 1 1 0 SCOP 81336 F1F0 ATP synthase subunit A
1 1 1 1 SCOP 47789 C-terminal domain of RNA polymerase alpha subunit
1 1 1 0 SCOP 51344 Epsilon subunit of F1F0-ATP synthase N-terminal domain
1 1 1 1 SCOP 51971 Nucleotide-binding domain
1 1 1 0 SCOP 140652 YozE-like
1 1 1 1 SCOP 82679 N-utilization substance G protein NusG, N-terminal domain
1 1 1 0 SCOP 55190 Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain
1 1 1 0 SCOP 158499 DnaD domain-like
1 1 1 0 SCOP 47090 PGBD-like
1 1 1 0 SCOP 63999 Thiamin pyrophosphokinase, catalytic domain
1 1 1 1 SCOP 55307 Tubulin C-terminal domain-like
1 1 1 1 SCOP 140990 FtsH protease domain-like
1 1 1 1 SCOP 53671 Aspartate/ornithine carbamoyltransferase
1 1 1 0 SCOP 142984 Nqo1 middle domain-like
1 1 1 0 SCOP 89260 Collagen-binding domain
1 1 1 0 SCOP 48163 An anticodon-binding domain of class I aminoacyl-tRNA synthetases
1 1 1 0 SCOP 54791 Eukaryotic type KH-domain (KH-domain type I)
1 1 1 1 SCOP 54826 Enolase N-terminal domain-like
1 1 1 1 SCOP 52029 GroEL apical domain-like
1 1 1 1 SCOP 81891 Poly A polymerase C-terminal region-like
1 1 1 1 SCOP 56425 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
1 1 1 0 SCOP 109797 Bacteriocin immunity protein-like
1 1 1 0 SCOP 57863 ArfGap/RecO-like zinc finger
1 1 1 0 SCOP 143548 Serine metabolism enzymes domain
1 1 1 0 SCOP 47364 Domain of the SRP/SRP receptor G-proteins
1 1 1 0 SCOP 48300 Ribosomal protein L7/12, oligomerisation (N-terminal) domain
1 1 1 0 SCOP 63737 Leukotriene A4 hydrolase N-terminal domain
1 1 1 1 SCOP 100920 Heat shock protein 70kD (HSP70), peptide-binding domain
1 1 1 0 SCOP 160964 MalF N-terminal region-like
1 1 1 0 SCOP 144083 Magnesium transport protein CorA, transmembrane region
1 1 1 0 SCOP 46934 UBA-like
1 1 1 0 SCOP 160240 Cation efflux protein cytoplasmic domain-like
1 1 1 0 SCOP 46604 Epsilon subunit of F1F0-ATP synthase C-terminal domain
1 1 1 0 SCOP 47823 lambda integrase-like, N-terminal domain
1 1 1 0 SCOP 100879 Lesion bypass DNA polymerase (Y-family), little finger domain
1 1 1 0 SCOP 141259 CarD-like
1 1 1 0 SCOP 53155 Methylated DNA-protein cysteine methyltransferase domain
1 1 1 1 SCOP 54373 FAD-linked reductases, C-terminal domain
1 1 1 0 SCOP 81761 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal domain
1 1 1 0 SCOP 82861 Mechanosensitive channel protein MscS (YggB), transmembrane region
1 1 1 0 SCOP 47831 Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain
1 1 1 0 SCOP 74942 YhbC-like, C-terminal domain
1 1 1 0 SCOP 117892 Band 7/SPFH domain
1 1 1 0 SCOP 75420 YhbC-like, N-terminal domain
1 1 1 1 SCOP 81624 N-terminal domain of MutM-like DNA repair proteins
1 1 1 0 SCOP 54752 RecA protein, C-terminal domain
1 1 1 0 SCOP 100934 Heat shock protein 70kD (HSP70), C-terminal subdomain
1 1 1 0 SCOP 102735 Trigger factor ribosome-binding domain
1 1 1 0 SCOP 69189 Penicillin-binding protein associated domain
1 1 1 0 SCOP 47807 5' to 3' exonuclease, C-terminal subdomain
1 1 1 0 SCOP 47446 Signal peptide-binding domain
1 1 1 1 SCOP 56542 Substrate-binding domain of HMG-CoA reductase
1 1 1 1 SCOP 64397 Hsp33 domain
1 1 1 0 SCOP 54991 Anticodon-binding domain of PheRS
1 1 1 1 SCOP 55271 DNA repair protein MutS, domain I
1 1 1 0 SCOP 55048 Probable ACP-binding domain of malonyl-CoA ACP transacylase
1 1 1 0 SCOP 47928 N-terminal domain of the delta subunit of the F1F0-ATP synthase
1 1 1 0 SCOP 49303 beta-Galactosidase/glucuronidase domain
1 1 1 1 SCOP 82051 Obg GTP-binding protein N-terminal domain
1 1 1 0 SCOP 54368 Glutamine synthetase, N-terminal domain
1 1 1 0 SCOP 55261 GAD domain-like
1 1 1 1 SCOP 54747 Ribosomal L11/L12e N-terminal domain
1 1 1 1 SCOP 75553 Smc hinge domain
1 1 1 1 SCOP 48168 R1 subunit of ribonucleotide reductase, N-terminal domain
1 1 1 1 SCOP 81886 Helical scaffold and wing domains of SecA
1 1 1 0 SCOP 54849 GroEL-intermediate domain like
1 1 1 1 SCOP 56194 Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain
1 1 1 0 SCOP 52156 Initiation factor IF2/eIF5b, domain 3
1 1 1 1 SCOP 55653 Ribosomal protein L9 C-domain
1 1 1 0 SCOP 55035 NAD-binding domain of HMG-CoA reductase
1 1 1 0 SCOP 75445 D-ribose-5-phosphate isomerase (RpiA), lid domain
1 1 1 0 SCOP 143517 TRCF domain-like
1 1 1 1 SCOP 101353 Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
1 1 1 1 SCOP 56553 Insert subdomain of RNA polymerase alpha subunit
1 1 1 0 SCOP 46929 DNA helicase RuvA subunit, C-terminal domain
1 1 1 0 SCOP 54184 Penicillin-binding protein 2x (pbp-2x), c-terminal domain
1 1 1 0 SCOP 101821 Aminopeptidase/glucanase lid domain
1 1 1 1 SCOP 69705 Transcription factor NusA, N-terminal domain
1 1 1 0 SCOP 53150 DNA repair protein MutS, domain II
1 1 1 1 SCOP 81767 Pre-protein crosslinking domain of SecA
1 1 1 0 SCOP 56519 Penicillin binding protein dimerisation domain
1 1 1 0 SCOP 143985 L,D-transpeptidase pre-catalytic domain-like
1 1 1 0 SCOP 81799 Putative methyltransferase TM0872, insert domain
1 1 1 0 SCOP 102741 Obg GTP-binding protein C-terminal domain
1 1 1 0 SCOP 109736 FGAM synthase PurL, linker domain

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The following superfamilies have one or more weak hits:

SCOP superfamily Myosin rod fragments
SCOP superfamily Zn-finger domain of Sec23/24
SCOP superfamily R3H domain
SCOP superfamily DPP6 N-terminal domain-like
SCOP superfamily F1F0 ATP synthase subunit B, membrane domain
SCOP superfamily Family A G protein-coupled receptor-like
SCOP superfamily Arabinanase/levansucrase/invertase
SCOP superfamily C-terminal domain of PLC-beta
SCOP superfamily Argininosuccinate synthetase, C-terminal domain
SCOP superfamily Cell wall binding repeat
SCOP superfamily Integrin alpha N-terminal domain
SCOP superfamily Apolipoprotein A-I
SCOP superfamily Oligomerization domain of hepatitis delta antigen
SCOP superfamily Methyl-accepting chemotaxis protein (MCP) signaling domain
SCOP superfamily XRCC4, C-terminal oligomerization domain
SCOP superfamily Tropomyosin
SCOP superfamily FYVE/PHD zinc finger
SCOP superfamily Cysteine-rich domain
SCOP superfamily Rubredoxin-like
SCOP superfamily Aerolisin/ETX pore-forming domain
SCOP superfamily Nitric oxide (NO) synthase oxygenase domain
SCOP superfamily ADP-ribosylation
SCOP superfamily CytB endotoxin-like
SCOP superfamily Methyl-coenzyme M reductase subunits
SCOP superfamily Nucleotide cyclase
SCOP superfamily RNA-binding domain, RBD
SCOP superfamily Pyrimidine nucleoside phosphorylase C-terminal domain
SCOP superfamily Translation initiation factor IF3, N-terminal domain
SCOP superfamily Staphylokinase/streptokinase
SCOP superfamily vWA-like
SCOP superfamily TolB, N-terminal domain
SCOP superfamily LeuD/IlvD-like
SCOP superfamily Galactose oxidase, central domain
SCOP superfamily Thermostable phytase (3-phytase)
SCOP superfamily Clathrin adaptor appendage domain
SCOP superfamily PKD domain
SCOP superfamily Lipovitellin-phosvitin complex, superhelical domain
SCOP superfamily ARM repeat
SCOP superfamily Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain
SCOP superfamily Conserved domain common to transcription factors TFIIS, elongin A, CRSP70
SCOP superfamily Prefoldin
SCOP superfamily PspA lactotransferrin-binding region
SCOP superfamily ATP synthase B chain-like
SCOP superfamily AF1531-like
SCOP superfamily V-type ATPase subunit E-like
SCOP superfamily BH3703-like
SCOP superfamily Bacterial polysaccharide co-polymerase-like
SCOP superfamily NEAT domain-like
SCOP superfamily BH3980-like
SCOP superfamily Ta0600-like
SCOP superfamily occludin/ELL-like
SCOP superfamily FdhE-like
SCOP superfamily GUN4-like
SCOP superfamily YfmB-like
SCOP superfamily Hyaluronidase post-catalytic domain-like
SCOP superfamily EsxAB dimer-like
SCOP superfamily YfbU-like
SCOP superfamily Hook domain
SCOP superfamily Hypothetical membrane protein Ta0354, soluble domain
SCOP superfamily Coronavirus S2 glycoprotein
SCOP superfamily OmpH-like
SCOP superfamily BAR/IMD domain-like
SCOP superfamily 2-methylcitrate dehydratase PrpD
SCOP superfamily JAB1/MPN domain
SCOP superfamily Adhesin YadA, collagen-binding domain
SCOP superfamily Formin homology 2 domain (FH2 domain)
SCOP superfamily Typo IV secretion system protein TraC

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