SUPERFAMILY 1.75 HMM library and genome assignments server


Anaplasma centrale str. Israel superfamily assignments

Taxonomy
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Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Anaplasmataceae; Anaplasma; Anaplasma centrale; Anaplasma centrale str. Israel

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Fasta format sequences
Domain assignments


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Assignment statistics

Sequences: 923 total
629 (68 %) with assignment
366 average length
56 % amino acid coverage
Domains: 967 total
440 unique superfamilies
249 unique families
299 average length
2.2 average superfamily size
54 % formed by duplication
Domain combinations: 224 domain pairs
459 unique architectures

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Superfamily assignments

Domains

Proteins

Architectures

Families

SCOP link

Superfamilies

83 73 43 7 SCOP 52540 P-loop containing nucleoside triphosphate hydrolases
23 18 15 2 SCOP 50249 Nucleic acid-binding proteins
19 19 11 6 SCOP 51735 NAD(P)-binding Rossmann-fold domains
15 15 4 1 SCOP 52833 Thioredoxin-like
15 15 9 3 SCOP 52374 Nucleotidylyl transferase
14 8 4 1 SCOP 53067 Actin-like ATPase domain
14 14 1 0 SCOP 56925 OMPA-like
13 12 11 5 SCOP 54211 Ribosomal protein S5 domain 2-like
12 12 3 3 SCOP 53335 S-adenosyl-L-methionine-dependent methyltransferases
11 11 7 2 SCOP 55681 Class II aaRS and biotin synthetases
9 8 6 3 SCOP 56059 Glutathione synthetase ATP-binding domain-like
9 9 3 2 SCOP 53098 Ribonuclease H-like
9 9 2 3 SCOP 53383 PLP-dependent transferases
9 8 7 2 SCOP 50447 Translation proteins
8 8 2 0 SCOP 103473 MFS general substrate transporter
8 3 3 0 SCOP 48403 Ankyrin repeat
7 7 6 2 SCOP 52317 Class I glutamine amidotransferase-like
7 7 5 2 SCOP 51905 FAD/NAD(P)-binding domain
7 6 4 1 SCOP 52440 PreATP-grasp domain
6 4 4 4 SCOP 52518 Thiamin diphosphate-binding fold (THDP-binding)
6 6 5 2 SCOP 55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
6 3 1 1 SCOP 63411 LuxS/MPP-like metallohydrolase
6 6 5 0 SCOP 47323 Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
6 3 3 1 SCOP 54980 EF-G C-terminal domain-like
5 5 4 1 SCOP 50104 Translation proteins SH3-like domain
5 5 5 0 SCOP 54534 FKBP-like
5 4 4 1 SCOP 52172 CheY-like
5 5 3 0 SCOP 53244 MurD-like peptide ligases, peptide-binding domain
5 5 3 2 SCOP 53623 MurD-like peptide ligases, catalytic domain
4 4 1 1 SCOP 53474 alpha/beta-Hydrolases
4 4 1 2 SCOP 51569 Aldolase
4 4 3 1 SCOP 53271 PRTase-like
4 3 2 0 SCOP 161098 MetI-like
4 4 4 0 SCOP 57716 Glucocorticoid receptor-like (DNA-binding domain)
4 4 3 3 SCOP 55120 Pseudouridine synthase
4 4 3 1 SCOP 55174 Alpha-L RNA-binding motif
4 4 3 1 SCOP 52402 Adenine nucleotide alpha hydrolases-like
4 4 2 1 SCOP 53850 Periplasmic binding protein-like II
4 4 4 0 SCOP 48452 TPR-like
4 3 2 2 SCOP 52096 ClpP/crotonase
4 4 3 1 SCOP 54631 CBS-domain pair
4 1 1 0 SCOP 141571 Pentapeptide repeat-like
4 4 4 0 SCOP 47781 RuvA domain 2-like
4 3 2 0 SCOP 82866 Multidrug efflux transporter AcrB transmembrane domain
4 4 2 2 SCOP 55347 Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
4 3 2 1 SCOP 56042 PurM C-terminal domain-like
4 3 2 1 SCOP 55326 PurM N-terminal domain-like
3 3 3 2 SCOP 53927 Cytidine deaminase-like
3 3 3 0 SCOP 46785 "Winged helix" DNA-binding domain
3 3 3 3 SCOP 53659 Isocitrate/Isopropylmalate dehydrogenase-like
3 3 3 2 SCOP 75217 alpha/beta knot
3 3 1 0 SCOP 47729 IHF-like DNA-binding proteins
3 3 3 0 SCOP 109998 Triger factor/SurA peptide-binding domain-like
3 3 3 0 SCOP 55486 Metalloproteases ("zincins"), catalytic domain
3 3 2 2 SCOP 53633 Carbamate kinase-like
3 3 2 1 SCOP 51161 Trimeric LpxA-like enzymes
3 3 2 0 SCOP 54862 4Fe-4S ferredoxins
3 3 3 0 SCOP 54292 2Fe-2S ferredoxin-like
3 3 3 1 SCOP 51412 Inosine monophosphate dehydrogenase (IMPDH)
3 3 2 1 SCOP 102114 Radical SAM enzymes
3 3 3 2 SCOP 56235 N-terminal nucleophile aminohydrolases (Ntn hydrolases)
3 3 2 3 SCOP 50475 FMN-binding split barrel
3 3 1 0 SCOP 54427 NTF2-like
3 3 3 2 SCOP 55931 Glutamine synthetase/guanido kinase
3 3 2 0 SCOP 52954 Class II aaRS ABD-related
3 3 2 1 SCOP 56601 beta-lactamase/transpeptidase-like
3 3 3 0 SCOP 47413 lambda repressor-like DNA-binding domains
3 3 3 0 SCOP 51230 Single hybrid motif
3 2 2 0 SCOP 88659 Sigma3 and sigma4 domains of RNA polymerase sigma factors
3 2 2 0 SCOP 54814 Prokaryotic type KH domain (KH-domain type II)
3 2 2 2 SCOP 53901 Thiolase-like
3 3 3 1 SCOP 46565 Chaperone J-domain
3 3 2 1 SCOP 48179 6-phosphogluconate dehydrogenase C-terminal domain-like
3 2 2 0 SCOP 50156 PDZ domain-like
3 1 1 0 SCOP 55979 DNA clamp
3 3 2 0 SCOP 51246 Rudiment single hybrid motif
3 3 2 0 SCOP 56176 FAD-binding/transporter-associated domain-like
3 3 3 1 SCOP 53223 Aminoacid dehydrogenase-like, N-terminal domain
3 3 2 0 SCOP 47384 Homodimeric domain of signal transducing histidine kinase
3 1 1 1 SCOP 55973 S-adenosylmethionine synthetase
3 3 1 0 SCOP 48163 An anticodon-binding domain of class I aminoacyl-tRNA synthetases
3 2 2 0 SCOP 63380 Riboflavin synthase domain-like
3 3 1 0 SCOP 117892 Band 7/SPFH domain
3 3 3 1 SCOP 50677 ValRS/IleRS/LeuRS editing domain
3 1 1 0 SCOP 53738 Phosphoglucomutase, first 3 domains
2 2 2 2 SCOP 51556 Metallo-dependent hydrolases
2 2 2 0 SCOP 53448 Nucleotide-diphospho-sugar transferases
2 2 1 0 SCOP 57829 Zn-binding ribosomal proteins
2 2 2 1 SCOP 53613 Ribokinase-like
2 2 1 1 SCOP 56420 Peptide deformylase
2 2 1 2 SCOP 51366 Ribulose-phoshate binding barrel
2 2 1 1 SCOP 53137 Translational machinery components
2 2 2 1 SCOP 55920 Creatinase/aminopeptidase
2 2 2 1 SCOP 46946 S13-like H2TH domain
2 2 1 1 SCOP 47240 Ferritin-like
2 2 1 0 SCOP 143800 L28p-like
2 2 1 1 SCOP 75620 Release factor
2 2 2 0 SCOP 50129 GroES-like
2 2 1 2 SCOP 64484 beta and beta-prime subunits of DNA dependent RNA-polymerase
2 2 1 1 SCOP 48557 L-aspartase-like
2 2 1 2 SCOP 55821 YrdC/RibB
2 2 2 0 SCOP 51261 Duplicated hybrid motif
2 2 1 1 SCOP 111283 Putative modulator of DNA gyrase, PmbA/TldD
2 2 1 1 SCOP 51283 dUTPase-like
2 2 2 0 SCOP 89360 HesB-like domain
2 2 2 2 SCOP 51621 Phosphoenolpyruvate/pyruvate domain
2 2 2 0 SCOP 56281 Metallo-hydrolase/oxidoreductase
2 2 1 1 SCOP 56655 Carbohydrate phosphatase
2 2 1 1 SCOP 55205 EPT/RTPC-like
2 2 1 0 SCOP 56935 Porins
2 2 1 1 SCOP 51395 FMN-linked oxidoreductases
2 2 1 0 SCOP 82657 BolA-like
2 2 1 1 SCOP 48576 Terpenoid synthases
2 2 2 2 SCOP 53187 Zn-dependent exopeptidases
2 2 2 1 SCOP 53328 Formyltransferase
2 2 2 1 SCOP 46626 Cytochrome c
2 1 1 0 SCOP 54506 Diaminopimelate epimerase-like
2 2 2 1 SCOP 51306 LexA/Signal peptidase
2 2 1 0 SCOP 81343 Fumarate reductase respiratory complex transmembrane subunits
2 2 2 1 SCOP 52151 FabD/lysophospholipase-like
2 2 1 1 SCOP 81442 Cytochrome c oxidase subunit I-like
2 2 1 1 SCOP 55620 Tetrahydrobiopterin biosynthesis enzymes-like
2 2 2 1 SCOP 81342 Transmembrane di-heme cytochromes
2 2 2 0 SCOP 46955 Putative DNA-binding domain
2 2 2 0 SCOP 57783 Zinc beta-ribbon
2 2 2 0 SCOP 82771 GIY-YIG endonuclease
2 2 2 0 SCOP 117916 Fe-S cluster assembly (FSCA) domain-like
2 2 2 1 SCOP 88946 Sigma2 domain of RNA polymerase sigma factors
2 2 1 1 SCOP 56349 DNA breaking-rejoining enzymes
2 2 2 1 SCOP 81301 Nucleotidyltransferase
2 2 1 1 SCOP 52507 Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
2 2 2 0 SCOP 55200 Translation initiation factor IF3, C-terminal domain
2 2 2 0 SCOP 88697 PUA domain-like
2 2 2 1 SCOP 52335 Methylglyoxal synthase-like
2 1 1 0 SCOP 55021 ACT-like
2 2 2 1 SCOP 55186 ThrRS/AlaRS common domain
2 2 2 1 SCOP 52777 CoA-dependent acyltransferases
2 2 1 1 SCOP 50465 EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
2 2 2 1 SCOP 55424 FAD/NAD-linked reductases, dimerisation (C-terminal) domain
2 2 2 0 SCOP 90123 ABC transporter transmembrane region
2 2 1 0 SCOP 46589 tRNA-binding arm
2 2 1 1 SCOP 81923 Double Clp-N motif
2 2 2 0 SCOP 48019 post-AAA+ oligomerization domain-like
2 2 2 1 SCOP 56719 Type II DNA topoisomerase
2 2 2 1 SCOP 52922 TK C-terminal domain-like
2 2 2 0 SCOP 51971 Nucleotide-binding domain
2 2 2 1 SCOP 52210 Succinyl-CoA synthetase domains
2 2 1 1 SCOP 53671 Aspartate/ornithine carbamoyltransferase
2 2 2 0 SCOP 68912 Rho N-terminal domain-like
2 2 2 1 SCOP 100920 Heat shock protein 70kD (HSP70), peptide-binding domain
2 2 2 0 SCOP 46600 C-terminal UvrC-binding domain of UvrB
2 2 1 0 SCOP 63418 MurE/MurF N-terminal domain
2 2 1 0 SCOP 51984 MurCD N-terminal domain
2 2 2 0 SCOP 54768 dsRNA-binding domain-like
2 1 1 0 SCOP 47794 Rad51 N-terminal domain-like
2 1 1 0 SCOP 56053 Ribosomal protein L6
2 1 1 0 SCOP 82693 Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
2 2 1 0 SCOP 50615 N-terminal domain of alpha and beta subunits of F1 ATP synthase
2 2 2 1 SCOP 81271 TGS-like
2 2 1 1 SCOP 82051 Obg GTP-binding protein N-terminal domain
2 1 1 0 SCOP 49493 HSP40/DnaJ peptide-binding domain
2 1 1 0 SCOP 55666 Ribonuclease PH domain 2-like
2 2 1 1 SCOP 47917 C-terminal domain of alpha and beta subunits of F1 ATP synthase
2 2 1 0 SCOP 56519 Penicillin binding protein dimerisation domain
1 1 1 1 SCOP 56731 DNA primase core
1 1 1 0 SCOP 48013 NusB-like
1 1 1 1 SCOP 74982 Small protein B (SmpB)
1 1 1 1 SCOP 56808 Ribosomal protein L1
1 1 1 1 SCOP 53178 Peptidyl-tRNA hydrolase-like
1 1 1 1 SCOP 47973 Ribosomal protein S7
1 1 1 0 SCOP 46911 Ribosomal protein S18
1 1 1 1 SCOP 52141 Uracil-DNA glycosylase-like
1 1 1 1 SCOP 75304 Amidase signature (AS) enzymes
1 1 1 0 SCOP 56112 Protein kinase-like (PK-like)
1 1 1 1 SCOP 53697 SIS domain
1 1 1 0 SCOP 142433 CinA-like
1 1 1 0 SCOP 56784 HAD-like
1 1 1 0 SCOP 111331 NAD kinase/diacylglycerol kinase-like
1 1 1 0 SCOP 54197 HIT-like
1 1 1 0 SCOP 82607 YbaB-like
1 1 1 0 SCOP 89919 Ribosome-binding factor A, RbfA
1 1 1 1 SCOP 54999 Ribosomal protein S10
1 1 1 1 SCOP 52166 Ribosomal protein L4
1 1 1 0 SCOP 54189 Ribosomal proteins S24e, L23 and L15e
1 1 1 0 SCOP 54570 Ribosomal protein S19
1 1 1 0 SCOP 54843 Ribosomal protein L22
1 1 1 1 SCOP 54686 Ribosomal protein L16p/L10e
1 1 1 1 SCOP 50193 Ribosomal protein L14
1 1 1 1 SCOP 55282 RL5-like
1 1 1 1 SCOP 56047 Ribosomal protein S8
1 1 1 0 SCOP 52080 Ribosomal proteins L15p and L18e
1 1 1 0 SCOP 103491 Preprotein translocase SecY subunit
1 1 1 0 SCOP 57840 Ribosomal protein L36
1 1 1 1 SCOP 64263 Prokaryotic ribosomal protein L17
1 1 1 1 SCOP 64182 DHH phosphoesterases
1 1 1 0 SCOP 143034 L35p-like
1 1 1 1 SCOP 74731 Ribosomal protein L20
1 1 1 0 SCOP 56300 Metallo-dependent phosphatases
1 1 1 0 SCOP 56214 4'-phosphopantetheinyl transferase
1 1 1 0 SCOP 69593 Glycerol-3-phosphate (1)-acyltransferase
1 1 1 0 SCOP 53597 Dihydrofolate reductase-like
1 1 1 0 SCOP 141091 L21p-like
1 1 1 0 SCOP 110324 Ribosomal L27 protein-like
1 1 1 0 SCOP 100950 NagB/RpiA/CoA transferase-like
1 1 1 0 SCOP 47336 ACP-like
1 1 1 1 SCOP 53748 Phosphoglycerate kinase
1 1 1 1 SCOP 75625 YebC-like
1 1 1 1 SCOP 82649 SufE/NifU
1 1 1 1 SCOP 50324 Inorganic pyrophosphatase
1 1 1 0 SCOP 52980 Restriction endonuclease-like
1 1 1 0 SCOP 160369 Ribosomal protein L10-like
1 1 1 0 SCOP 46992 Ribosomal protein S20
1 1 1 1 SCOP 89623 Ribose/Galactose isomerase RpiB/AlsB
1 1 1 0 SCOP 52943 ATP synthase (F1-ATPase), gamma subunit
1 1 1 0 SCOP 81333 F1F0 ATP synthase subunit C
1 1 1 1 SCOP 52161 Ribosomal protein L13
1 1 1 0 SCOP 47060 S15/NS1 RNA-binding domain
1 1 1 1 SCOP 51351 Triosephosphate isomerase (TIM)
1 1 1 1 SCOP 55194 Ribosome recycling factor, RRF
1 1 1 0 SCOP 54565 Ribosomal protein S16
1 1 1 1 SCOP 69765 IpsF-like
1 1 1 1 SCOP 51730 FAD-linked oxidoreductase
1 1 1 0 SCOP 52821 Rhodanese/Cell cycle control phosphatase
1 1 1 0 SCOP 54611 SecB-like
1 1 1 1 SCOP 53720 ALDH-like
1 1 1 1 SCOP 48150 DNA-glycosylase
1 1 1 1 SCOP 51713 tRNA-guanine transglycosylase
1 1 1 0 SCOP 50715 Ribosomal protein L25-like
1 1 1 1 SCOP 56770 HydA/Nqo6-like
1 1 1 1 SCOP 53756 UDP-Glycosyltransferase/glycogen phosphorylase
1 1 1 1 SCOP 52313 Ribosomal protein S2
1 1 1 1 SCOP 64005 Undecaprenyl diphosphate synthase
1 1 1 0 SCOP 54285 MoaD/ThiS
1 1 1 1 SCOP 142695 RibA-like
1 1 1 0 SCOP 54637 Thioesterase/thiol ester dehydrase-isomerase
1 1 1 0 SCOP 81345 ABC transporter involved in vitamin B12 uptake, BtuC
1 1 1 0 SCOP 46689 Homeodomain-like
1 1 1 0 SCOP 50685 Barwin-like endoglucanases
1 1 1 0 SCOP 52121 Lumazine synthase
1 1 1 1 SCOP 81452 Cytochrome c oxidase subunit III-like
1 1 1 0 SCOP 46561 Ribosomal protein L29 (L29p)
1 1 1 0 SCOP 56796 Dehydroquinate synthase-like
1 1 1 0 SCOP 54995 Ribosomal protein S6
1 1 1 0 SCOP 55387 Frataxin/Nqo15-like
1 1 1 1 SCOP 56104 SAICAR synthase-like
1 1 1 0 SCOP 52949 Macro domain-like
1 1 1 0 SCOP 109604 HD-domain/PDEase-like
1 1 1 0 SCOP 55315 L30e-like
1 1 1 1 SCOP 56672 DNA/RNA polymerases
1 1 1 1 SCOP 48256 Citrate synthase
1 1 1 1 SCOP 102886 Coproporphyrinogen III oxidase
1 1 1 1 SCOP 51726 UROD/MetE-like
1 1 1 0 SCOP 55729 Acyl-CoA N-acyltransferases (Nat)
1 1 1 1 SCOP 88723 PIN domain-like
1 1 1 1 SCOP 53649 Alkaline phosphatase-like
1 1 1 0 SCOP 50630 Acid proteases
1 1 1 0 SCOP 51445 (Trans)glycosidases
1 1 1 0 SCOP 69572 Activating enzymes of the ubiquitin-like proteins
1 1 1 0 SCOP 56317 Carbon-nitrogen hydrolase
1 1 1 0 SCOP 47819 HRDC-like
1 1 1 1 SCOP 52972 ITPase-like
1 1 1 1 SCOP 54919 Nucleoside diphosphate kinase, NDK
1 1 1 0 SCOP 110849 ParB/Sulfiredoxin
1 1 1 0 SCOP 88713 Glycoside hydrolase/deacetylase
1 1 1 0 SCOP 55257 RBP11-like subunits of RNA polymerase
1 1 1 1 SCOP 64153 YjeF N-terminal domain-like
1 1 1 0 SCOP 55961 Bet v1-like
1 1 1 0 SCOP 69618 HemD-like
1 1 1 0 SCOP 63562 RPB6/omega subunit-like
1 1 1 1 SCOP 53800 Chelatase
1 1 1 1 SCOP 81648 a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
1 1 1 0 SCOP 102405 MCP/YpsA-like
1 1 1 0 SCOP 143243 Nqo5-like
1 1 1 1 SCOP 51717 Dihydropteroate synthetase-like
1 1 1 1 SCOP 55073 Nucleotide cyclase
1 1 1 1 SCOP 51998 PFL-like glycyl radical enzymes
1 1 1 0 SCOP 102712 JAB1/MPN domain
1 1 1 1 SCOP 50494 Trypsin-like serine proteases
1 1 1 1 SCOP 52255 N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)
1 1 1 1 SCOP 52016 LeuD/IlvD-like
1 1 1 1 SCOP 142754 NadA-like
1 1 1 0 SCOP 49482 Aromatic compound dioxygenase
1 1 1 0 SCOP 53807 "Helical backbone" metal receptor
1 1 1 1 SCOP 50022 ISP domain
1 1 1 0 SCOP 55083 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK
1 1 1 1 SCOP 49503 Cupredoxins
1 1 1 0 SCOP 89550 PHP domain-like
1 1 1 0 SCOP 56954 Outer membrane efflux proteins (OEP)
1 1 1 0 SCOP 64167 SurE-like
1 1 1 1 SCOP 63892 Pyridoxine 5'-phosphate synthase
1 1 1 0 SCOP 161111 Cation efflux protein transmembrane domain-like
1 1 1 0 SCOP 54913 GlnB-like
1 1 1 0 SCOP 141000 Glu-tRNAGln amidotransferase C subunit
1 1 1 1 SCOP 56762 HydB/Nqo4-like
1 1 1 0 SCOP 116842 XseB-like
1 1 1 1 SCOP 110399 ThiG-like
1 1 1 0 SCOP 54736 ClpS-like
1 1 1 1 SCOP 111304 Recombination protein RecR
1 1 1 0 SCOP 53955 Lysozyme-like
1 1 1 1 SCOP 69796 Thymidylate synthase-complementing protein Thy1
1 1 1 1 SCOP 53732 Aconitase iron-sulfur domain
1 1 1 0 SCOP 69065 RNase III domain-like
1 1 1 1 SCOP 56219 DNase I-like
1 1 1 0 SCOP 111369 HlyD-like secretion proteins
1 1 1 0 SCOP 158442 DsbB-like
1 1 1 0 SCOP 102829 Cell division protein ZapA-like
1 1 1 1 SCOP 51391 Thiamin phosphate synthase
1 1 1 0 SCOP 50998 Quinoprotein alcohol dehydrogenase-like
1 1 1 0 SCOP 89095 GatB/YqeY motif
1 1 1 0 SCOP 109910 YgfY-like
1 1 1 0 SCOP 101307 YutG-like
1 1 1 0 SCOP 103088 OmpA-like
1 1 1 0 SCOP 51338 Composite domain of metallo-dependent hydrolases
1 1 1 0 SCOP 118215 Proton glutamate symport protein
1 1 1 0 SCOP 103025 Folate-binding domain
1 1 1 1 SCOP 110069 ApaG-like
1 1 1 1 SCOP 48295 TrpR-like
1 1 1 0 SCOP 111384 OmpH-like
1 1 1 0 SCOP 50486 FMT C-terminal domain-like
1 1 1 0 SCOP 101738 SspB-like
1 1 1 0 SCOP 64076 MTH938-like
1 1 1 0 SCOP 140319 IscX-like
1 1 1 0 SCOP 50331 MOP-like
1 1 1 1 SCOP 51604 Enolase C-terminal domain-like
1 1 1 0 SCOP 69754 Ribosome binding protein Y (YfiA homologue)
1 1 1 0 SCOP 74653 TolA/TonB C-terminal domain
1 1 1 1 SCOP 56091 DNA ligase/mRNA capping enzyme, catalytic domain
1 1 1 0 SCOP 109709 KorB DNA-binding domain-like
1 1 1 0 SCOP 158791 MgtE N-terminal domain-like
1 1 1 0 SCOP 50346 PRC-barrel domain
1 1 1 1 SCOP 46548 alpha-helical ferredoxin
1 1 1 1 SCOP 52490 Tubulin nucleotide-binding domain-like
1 1 1 0 SCOP 56563 Major capsid protein gp5
1 1 1 0 SCOP 47616 GST C-terminal domain-like
1 1 1 0 SCOP 53092 Creatinase/prolidase N-terminal domain
1 1 1 0 SCOP 52343 Ferredoxin reductase-like, C-terminal NADP-linked domain
1 1 1 0 SCOP 48024 N-terminal domain of DnaB helicase
1 1 1 0 SCOP 48592 GroEL equatorial domain-like
1 1 1 1 SCOP 56712 Prokaryotic type I DNA topoisomerase
1 1 1 0 SCOP 53706 Formate dehydrogenase/DMSO reductase, domains 1-3
1 1 1 1 SCOP 51690 Nicotinate/Quinolinate PRTase C-terminal domain-like
1 1 1 0 SCOP 82093 Heme chaperone CcmE
1 1 1 0 SCOP 57938 DnaJ/Hsp40 cysteine-rich domain
1 1 1 0 SCOP 82114 Riboflavin kinase-like
1 1 1 0 SCOP 46906 Ribosomal protein L11, C-terminal domain
1 1 1 0 SCOP 160443 SMR domain-like
1 1 1 0 SCOP 50789 Herpes virus serine proteinase, assemblin
1 1 1 0 SCOP 69304 Tricorn protease N-terminal domain
1 1 1 1 SCOP 102645 CoaB-like
1 1 1 1 SCOP 54821 Ribosomal protein S3 C-terminal domain
1 1 1 0 SCOP 52009 Phosphohistidine domain
1 1 1 0 SCOP 109635 DnaK suppressor protein DksA, alpha-hairpin domain
1 1 1 1 SCOP 81935 N-terminal domain of bifunctional PutA protein
1 1 1 0 SCOP 118116 DNA mismatch repair protein MutL
1 1 1 0 SCOP 81336 F1F0 ATP synthase subunit A
1 1 1 1 SCOP 47789 C-terminal domain of RNA polymerase alpha subunit
1 1 1 0 SCOP 51344 Epsilon subunit of F1F0-ATP synthase N-terminal domain
1 1 1 0 SCOP 55658 L9 N-domain-like
1 1 1 0 SCOP 82679 N-utilization substance G protein NusG, N-terminal domain
1 1 1 0 SCOP 55190 Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain
1 1 1 0 SCOP 69055 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain
1 1 1 0 SCOP 56037 PheT/TilS domain
1 1 1 1 SCOP 48334 DNA repair protein MutS, domain III
1 1 1 0 SCOP 58014 Coiled-coil domain of nucleotide exchange factor GrpE
1 1 1 0 SCOP 81464 Cytochrome c oxidase subunit II-like, transmembrane region
1 1 1 0 SCOP 161093 MgtE membrane domain-like
1 1 1 1 SCOP 55307 Tubulin C-terminal domain-like
1 1 1 1 SCOP 140990 FtsH protease domain-like
1 1 1 0 SCOP 142984 Nqo1 middle domain-like
1 1 1 0 SCOP 52964 TolB, N-terminal domain
1 1 1 1 SCOP 54719 Fe,Mn superoxide dismutase (SOD), C-terminal domain
1 1 1 1 SCOP 110111 Ctag/Cox11
1 1 1 1 SCOP 143968 UbiD C-terminal domain-like
1 1 1 1 SCOP 52021 Carbamoyl phosphate synthetase, small subunit N-terminal domain
1 1 1 0 SCOP 54791 Eukaryotic type KH-domain (KH-domain type I)
1 1 1 1 SCOP 54826 Enolase N-terminal domain-like
1 1 1 1 SCOP 52029 GroEL apical domain-like
1 1 1 0 SCOP 55060 GHMP Kinase, C-terminal domain
1 1 1 0 SCOP 81891 Poly A polymerase C-terminal region-like
1 1 1 1 SCOP 54810 GMP synthetase C-terminal dimerisation domain
1 1 1 1 SCOP 56425 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
1 1 1 1 SCOP 101904 GyrA/ParC C-terminal domain-like
1 1 1 0 SCOP 57863 ArfGap/RecO-like zinc finger
1 1 1 0 SCOP 46977 Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
1 1 1 0 SCOP 47364 Domain of the SRP/SRP receptor G-proteins
1 1 1 0 SCOP 48300 Ribosomal protein L7/12, oligomerisation (N-terminal) domain
1 1 1 0 SCOP 46934 UBA-like
1 1 1 0 SCOP 160240 Cation efflux protein cytoplasmic domain-like
1 1 1 1 SCOP 56327 LDH C-terminal domain-like
1 1 1 0 SCOP 110836 Hypothetical protein SAV1430
1 1 1 0 SCOP 52113 BRCT domain
1 1 1 0 SCOP 141259 CarD-like
1 1 1 0 SCOP 54373 FAD-linked reductases, C-terminal domain
1 1 1 0 SCOP 48435 Bacterial muramidases
1 1 1 0 SCOP 81624 N-terminal domain of MutM-like DNA repair proteins
1 1 1 0 SCOP 54752 RecA protein, C-terminal domain
1 1 1 0 SCOP 100934 Heat shock protein 70kD (HSP70), C-terminal subdomain
1 1 1 0 SCOP 55957 Phosphoglucomutase, C-terminal domain
1 1 1 0 SCOP 54782 Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain
1 1 1 0 SCOP 140490 Nqo1C-terminal domain-like
1 1 1 0 SCOP 102735 Trigger factor ribosome-binding domain
1 1 1 0 SCOP 55031 Bacterial exopeptidase dimerisation domain
1 1 1 0 SCOP 82714 Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
1 1 1 0 SCOP 46557 GreA transcript cleavage protein, N-terminal domain
1 1 1 0 SCOP 54675 Nicotinate/Quinolinate PRTase N-terminal domain-like
1 1 1 0 SCOP 69189 Penicillin-binding protein associated domain
1 1 1 0 SCOP 47807 5' to 3' exonuclease, C-terminal subdomain
1 1 1 0 SCOP 47446 Signal peptide-binding domain
1 1 1 0 SCOP 54991 Anticodon-binding domain of PheRS
1 1 1 1 SCOP 55271 DNA repair protein MutS, domain I
1 1 1 0 SCOP 55048 Probable ACP-binding domain of malonyl-CoA ACP transacylase
1 1 1 0 SCOP 47928 N-terminal domain of the delta subunit of the F1F0-ATP synthase
1 1 1 1 SCOP 48108 Carbamoyl phosphate synthetase, large subunit connection domain
1 1 1 1 SCOP 142019 Nqo1 FMN-binding domain-like
1 1 1 0 SCOP 54368 Glutamine synthetase, N-terminal domain
1 1 1 0 SCOP 55261 GAD domain-like
1 1 1 0 SCOP 54713 Elongation factor Ts (EF-Ts), dimerisation domain
1 1 1 1 SCOP 64158 2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain
1 1 1 0 SCOP 110942 HSP90 C-terminal domain
1 1 1 0 SCOP 54747 Ribosomal L11/L12e N-terminal domain
1 1 1 0 SCOP 46609 Fe,Mn superoxide dismutase (SOD), N-terminal domain
1 1 1 0 SCOP 48168 R1 subunit of ribonucleotide reductase, N-terminal domain
1 1 1 1 SCOP 81886 Helical scaffold and wing domains of SecA
1 1 1 0 SCOP 54849 GroEL-intermediate domain like
1 1 1 0 SCOP 56194 Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain
1 1 1 0 SCOP 52156 Initiation factor IF2/eIF5b, domain 3
1 1 1 0 SCOP 116878 TrmE connector domain
1 1 1 0 SCOP 51064 Head domain of nucleotide exchange factor GrpE
1 1 1 0 SCOP 47005 Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
1 1 1 0 SCOP 55653 Ribosomal protein L9 C-domain
1 1 1 0 SCOP 143517 TRCF domain-like
1 1 1 1 SCOP 101353 Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
1 1 1 0 SCOP 56553 Insert subdomain of RNA polymerase alpha subunit
1 1 1 0 SCOP 46929 DNA helicase RuvA subunit, C-terminal domain
1 1 1 0 SCOP 54364 Translation initiation factor IF3, N-terminal domain
1 1 1 0 SCOP 69705 Transcription factor NusA, N-terminal domain
1 1 1 0 SCOP 53150 DNA repair protein MutS, domain II
1 1 1 1 SCOP 81767 Pre-protein crosslinking domain of SecA
1 1 1 0 SCOP 81799 Putative methyltransferase TM0872, insert domain
1 1 1 0 SCOP 46915 Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3

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The following superfamilies have one or more weak hits:

SCOP superfamily Myosin rod fragments
SCOP superfamily Calcium ATPase, transmembrane domain M
SCOP superfamily Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor
SCOP superfamily Gated mechanosensitive channel
SCOP superfamily F1 ATPase inhibitor, IF1, C-terminal domain
SCOP superfamily Phase 1 flagellin
SCOP superfamily Precorrin-8X methylmutase CbiC/CobH
SCOP superfamily Apolipoprotein A-I
SCOP superfamily Bacterial hemolysins
SCOP superfamily Insulin-like
SCOP superfamily C-type lectin-like
SCOP superfamily PYP-like sensor domain (PAS domain)
SCOP superfamily Actin depolymerizing proteins
SCOP superfamily Cystatin/monellin
SCOP superfamily Interleukin 8-like chemokines
SCOP superfamily Purine and uridine phosphorylases
SCOP superfamily C-terminal domain of transcriptional repressors
SCOP superfamily Multiheme cytochromes
SCOP superfamily ARM repeat
SCOP superfamily DNA polymerase beta, N-terminal domain-like
SCOP superfamily HSC20 (HSCB), C-terminal oligomerisation domain
SCOP superfamily HAMP domain-like
SCOP superfamily Peptidoglycan deacetylase N-terminal noncatalytic region
SCOP superfamily GAS2 domain-like
SCOP superfamily PTSIIA/GutA-like
SCOP superfamily RUN domain-like
SCOP superfamily Hook domain
SCOP superfamily Multidrug resistance efflux transporter EmrE

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