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Clostridiales genomosp. BVAB3 str. UPII9-5 superfamily assignments

Taxonomy
Taxonomy browser entry

Bacteria; Terrabacteria group; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Mageeibacillus; Mageeibacillus indolicus; Mageeibacillus indolicus UPII9-5

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Fasta format sequences
Domain assignments


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Assignment statistics

Sequences: 1567 total
1035 (66 %) with assignment
343 average length
58 % amino acid coverage
Domains: 1534 total
475 unique superfamilies
276 unique families
303 average length
3.2 average superfamily size
69 % formed by duplication
Domain combinations: 281 domain pairs
613 unique architectures

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Superfamily assignments

Domains

Proteins

Architectures

Families

SCOP link

Superfamilies

184 158 56 7 SCOP 52540 P-loop containing nucleoside triphosphate hydrolases
36 34 6 1 SCOP 161098 MetI-like
35 34 17 0 SCOP 46785 "Winged helix" DNA-binding domain
28 22 18 3 SCOP 50249 Nucleic acid-binding proteins
28 28 7 5 SCOP 53335 S-adenosyl-L-methionine-dependent methyltransferases
28 28 6 1 SCOP 53850 Periplasmic binding protein-like II
25 23 12 6 SCOP 51735 NAD(P)-binding Rossmann-fold domains
24 17 9 0 SCOP 46689 Homeodomain-like
23 18 3 1 SCOP 55729 Acyl-CoA N-acyltransferases (Nat)
20 12 5 4 SCOP 53067 Actin-like ATPase domain
18 18 3 0 SCOP 47413 lambda repressor-like DNA-binding domains
18 18 2 0 SCOP 90123 ABC transporter transmembrane region
17 16 13 5 SCOP 54211 Ribosomal protein S5 domain 2-like
16 16 5 4 SCOP 53383 PLP-dependent transferases
15 13 8 0 SCOP 51905 FAD/NAD(P)-binding domain
14 14 8 2 SCOP 56784 HAD-like
14 14 13 2 SCOP 52374 Nucleotidylyl transferase
14 13 9 1 SCOP 55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
13 12 9 2 SCOP 50447 Translation proteins
12 11 4 2 SCOP 53448 Nucleotide-diphospho-sugar transferases
12 12 10 1 SCOP 55681 Class II aaRS and biotin synthetases
12 12 3 0 SCOP 102114 Radical SAM enzymes
12 11 7 4 SCOP 51445 (Trans)glycosidases
12 7 4 1 SCOP 54980 EF-G C-terminal domain-like
10 8 4 1 SCOP 53271 PRTase-like
10 9 5 1 SCOP 53187 Zn-dependent exopeptidases
10 9 4 1 SCOP 52172 CheY-like
9 9 2 1 SCOP 52833 Thioredoxin-like
9 9 9 3 SCOP 52402 Adenine nucleotide alpha hydrolases-like
9 3 2 0 SCOP 53738 Phosphoglucomutase, first 3 domains
8 8 3 2 SCOP 53098 Ribonuclease H-like
8 8 5 1 SCOP 55486 Metalloproteases ("zincins"), catalytic domain
8 4 2 0 SCOP 103481 Multidrug resistance efflux transporter EmrE
7 7 2 2 SCOP 53613 Ribokinase-like
7 7 4 3 SCOP 55120 Pseudouridine synthase
7 5 5 3 SCOP 52518 Thiamin diphosphate-binding fold (THDP-binding)
7 7 5 1 SCOP 109604 HD-domain/PDEase-like
7 6 4 1 SCOP 56601 beta-lactamase/transpeptidase-like
7 7 3 0 SCOP 47384 Homodimeric domain of signal transducing histidine kinase
7 7 3 2 SCOP 55347 Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
7 6 6 1 SCOP 53623 MurD-like peptide ligases, catalytic domain
6 6 4 2 SCOP 50104 Translation proteins SH3-like domain
6 6 4 3 SCOP 75217 alpha/beta knot
6 6 3 0 SCOP 46894 C-terminal effector domain of the bipartite response regulators
6 6 2 1 SCOP 53822 Periplasmic binding protein-like I
6 4 2 0 SCOP 116734 DNA methylase specificity domain
6 5 5 0 SCOP 53244 MurD-like peptide ligases, peptide-binding domain
6 6 6 1 SCOP 47323 Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
6 4 4 0 SCOP 116726 TrkA C-terminal domain-like
6 6 5 0 SCOP 81653 Calcium ATPase, transduction domain A
5 5 1 1 SCOP 53474 alpha/beta-Hydrolases
5 5 3 0 SCOP 56300 Metallo-dependent phosphatases
5 5 2 0 SCOP 103473 MFS general substrate transporter
5 4 4 0 SCOP 54862 4Fe-4S ferredoxins
5 5 3 4 SCOP 53756 UDP-Glycosyltransferase/glycogen phosphorylase
5 5 4 0 SCOP 56281 Metallo-hydrolase/oxidoreductase
5 5 2 1 SCOP 56801 Acetyl-CoA synthetase-like
5 5 4 1 SCOP 54001 Cysteine proteinases
5 5 3 0 SCOP 51206 cAMP-binding domain-like
5 4 3 0 SCOP 88659 Sigma3 and sigma4 domains of RNA polymerase sigma factors
5 4 4 1 SCOP 54814 Prokaryotic type KH domain (KH-domain type II)
5 4 4 0 SCOP 55021 ACT-like
5 5 4 1 SCOP 81665 Calcium ATPase, transmembrane domain M
4 4 4 3 SCOP 51556 Metallo-dependent hydrolases
4 4 4 0 SCOP 57716 Glucocorticoid receptor-like (DNA-binding domain)
4 4 2 0 SCOP 52218 Flavoproteins
4 4 3 1 SCOP 55174 Alpha-L RNA-binding motif
4 3 3 0 SCOP 48452 TPR-like
4 4 1 0 SCOP 55811 Nudix
4 4 2 0 SCOP 51306 LexA/Signal peptidase
4 4 4 0 SCOP 51126 Pectin lyase-like
4 4 3 1 SCOP 52954 Class II aaRS ABD-related
4 4 4 1 SCOP 54631 CBS-domain pair
4 3 3 0 SCOP 49478 Cna protein B-type domain
4 4 1 0 SCOP 143011 RelE-like
4 4 1 1 SCOP 53807 "Helical backbone" metal receptor
4 4 4 1 SCOP 81301 Nucleotidyltransferase
4 4 3 0 SCOP 50331 MOP-like
4 4 4 0 SCOP 47781 RuvA domain 2-like
4 3 2 0 SCOP 82866 Multidrug efflux transporter AcrB transmembrane domain
4 3 3 0 SCOP 50156 PDZ domain-like
4 4 3 1 SCOP 56719 Type II DNA topoisomerase
4 4 4 0 SCOP 51011 Glycosyl hydrolase domain
4 4 1 0 SCOP 55031 Bacterial exopeptidase dimerisation domain
4 4 4 1 SCOP 47917 C-terminal domain of alpha and beta subunits of F1 ATP synthase
3 3 1 1 SCOP 51569 Aldolase
3 3 2 1 SCOP 52317 Class I glutamine amidotransferase-like
3 3 1 1 SCOP 53167 Purine and uridine phosphorylases
3 3 1 2 SCOP 53927 Cytidine deaminase-like
3 3 1 3 SCOP 51366 Ribulose-phoshate binding barrel
3 3 3 2 SCOP 64182 DHH phosphoesterases
3 3 3 2 SCOP 47240 Ferritin-like
3 3 3 0 SCOP 52980 Restriction endonuclease-like
3 2 2 0 SCOP 81333 F1F0 ATP synthase subunit C
3 3 2 2 SCOP 53633 Carbamate kinase-like
3 3 2 0 SCOP 51161 Trimeric LpxA-like enzymes
3 2 2 0 SCOP 54637 Thioesterase/thiol ester dehydrase-isomerase
3 3 3 1 SCOP 52096 ClpP/crotonase
3 3 1 1 SCOP 51395 FMN-linked oxidoreductases
3 3 2 1 SCOP 51419 PLP-binding barrel
3 3 3 0 SCOP 55315 L30e-like
3 3 3 0 SCOP 81296 E set domains
3 1 1 0 SCOP 49785 Galactose-binding domain-like
3 3 3 1 SCOP 74650 Galactose mutarotase-like
3 3 3 2 SCOP 48208 Six-hairpin glycosidases
3 3 3 0 SCOP 55008 HMA, heavy metal-associated domain
3 3 3 0 SCOP 52266 SGNH hydrolase
3 3 3 3 SCOP 51998 PFL-like glycyl radical enzymes
3 3 2 0 SCOP 56349 DNA breaking-rejoining enzymes
3 2 2 0 SCOP 63411 LuxS/MPP-like metallohydrolase
3 3 1 1 SCOP 161070 SNF-like
3 3 3 1 SCOP 63817 Sortase
3 3 1 0 SCOP 160631 SMI1/KNR4-like
3 3 3 1 SCOP 55186 ThrRS/AlaRS common domain
3 3 1 0 SCOP 48179 6-phosphogluconate dehydrogenase C-terminal domain-like
3 3 2 0 SCOP 46589 tRNA-binding arm
3 1 1 0 SCOP 55979 DNA clamp
3 3 2 1 SCOP 48019 post-AAA+ oligomerization domain-like
3 3 3 1 SCOP 52922 TK C-terminal domain-like
3 1 1 1 SCOP 55973 S-adenosylmethionine synthetase
3 3 2 0 SCOP 51215 Regulatory protein AraC
3 3 3 0 SCOP 46600 C-terminal UvrC-binding domain of UvrB
3 3 3 1 SCOP 50677 ValRS/IleRS/LeuRS editing domain
3 3 2 0 SCOP 55957 Phosphoglucomutase, C-terminal domain
3 3 3 0 SCOP 50615 N-terminal domain of alpha and beta subunits of F1 ATP synthase
3 3 3 1 SCOP 81271 TGS-like
2 2 2 1 SCOP 56059 Glutathione synthetase ATP-binding domain-like
2 2 2 0 SCOP 48013 NusB-like
2 2 1 0 SCOP 55594 HPr-like
2 2 2 0 SCOP 53790 Tetrapyrrole methylase
2 2 2 1 SCOP 81606 PP2C-like
2 2 2 1 SCOP 56112 Protein kinase-like (PK-like)
2 2 2 1 SCOP 53697 SIS domain
2 2 1 2 SCOP 111331 NAD kinase/diacylglycerol kinase-like
2 2 1 1 SCOP 53137 Translational machinery components
2 2 2 1 SCOP 55920 Creatinase/aminopeptidase
2 2 2 1 SCOP 46946 S13-like H2TH domain
2 2 1 0 SCOP 69593 Glycerol-3-phosphate (1)-acyltransferase
2 2 1 1 SCOP 53784 Phosphofructokinase
2 2 1 1 SCOP 51658 Xylose isomerase-like
2 2 2 1 SCOP 100950 NagB/RpiA/CoA transferase-like
2 2 1 1 SCOP 75620 Release factor
2 2 1 0 SCOP 51695 PLC-like phosphodiesterases
2 2 1 2 SCOP 53659 Isocitrate/Isopropylmalate dehydrogenase-like
2 2 2 1 SCOP 53748 Phosphoglycerate kinase
2 2 2 0 SCOP 109998 Triger factor/SurA peptide-binding domain-like
2 2 2 1 SCOP 50129 GroES-like
2 2 1 2 SCOP 64484 beta and beta-prime subunits of DNA dependent RNA-polymerase
2 2 1 1 SCOP 48557 L-aspartase-like
2 2 1 0 SCOP 51261 Duplicated hybrid motif
2 2 2 1 SCOP 53686 Tryptophan synthase beta subunit-like PLP-dependent enzymes
2 2 2 2 SCOP 51621 Phosphoenolpyruvate/pyruvate domain
2 2 1 1 SCOP 53254 Phosphoglycerate mutase-like
2 2 1 1 SCOP 81345 ABC transporter involved in vitamin B12 uptake, BtuC
2 2 2 1 SCOP 56796 Dehydroquinate synthase-like
2 1 1 0 SCOP 50985 RCC1/BLIP-II
2 2 2 0 SCOP 50475 FMN-binding split barrel
2 2 2 2 SCOP 56672 DNA/RNA polymerases
2 2 1 0 SCOP 51726 UROD/MetE-like
2 2 2 1 SCOP 50891 Cyclophilin-like
2 2 1 0 SCOP 48317 Acid phosphatase/Vanadium-dependent haloperoxidase
2 2 2 1 SCOP 88723 PIN domain-like
2 2 1 1 SCOP 53590 Nucleoside hydrolase
2 2 2 0 SCOP 54534 FKBP-like
2 2 1 0 SCOP 52499 Isochorismatase-like hydrolases
2 2 1 0 SCOP 69572 Activating enzymes of the ubiquitin-like proteins
2 2 1 2 SCOP 52972 ITPase-like
2 2 2 1 SCOP 55781 GAF domain-like
2 2 1 0 SCOP 101960 Stabilizer of iron transporter SufD
2 2 1 0 SCOP 143422 Transposase IS200-like
2 2 2 0 SCOP 57783 Zinc beta-ribbon
2 2 2 0 SCOP 89550 PHP domain-like
2 2 2 1 SCOP 52467 DHS-like NAD/FAD-binding domain
2 2 2 1 SCOP 53955 Lysozyme-like
2 2 2 1 SCOP 69065 RNase III domain-like
2 2 2 1 SCOP 56219 DNase I-like
2 2 2 0 SCOP 51338 Composite domain of metallo-dependent hydrolases
2 2 1 1 SCOP 118215 Proton glutamate symport protein
2 2 2 0 SCOP 48295 TrpR-like
2 2 2 0 SCOP 57802 Rubredoxin-like
2 2 2 0 SCOP 55785 PYP-like sensor domain (PAS domain)
2 2 2 0 SCOP 75138 HprK N-terminal domain-like
2 2 2 1 SCOP 51604 Enolase C-terminal domain-like
2 2 2 1 SCOP 46565 Chaperone J-domain
2 2 2 0 SCOP 46548 alpha-helical ferredoxin
2 2 1 0 SCOP 48008 GntR ligand-binding domain-like
2 2 2 0 SCOP 55424 FAD/NAD-linked reductases, dimerisation (C-terminal) domain
2 2 2 0 SCOP 52343 Ferredoxin reductase-like, C-terminal NADP-linked domain
2 2 2 0 SCOP 52743 Subtilisin-like
2 1 1 1 SCOP 48592 GroEL equatorial domain-like
2 2 2 0 SCOP 56176 FAD-binding/transporter-associated domain-like
2 2 2 0 SCOP 101898 NHL repeat
2 2 1 2 SCOP 53223 Aminoacid dehydrogenase-like, N-terminal domain
2 2 2 1 SCOP 52009 Phosphohistidine domain
2 1 1 0 SCOP 51971 Nucleotide-binding domain
2 2 2 0 SCOP 158472 HAMP domain-like
2 2 2 1 SCOP 56037 PheT/TilS domain
2 2 2 1 SCOP 48334 DNA repair protein MutS, domain III
2 2 1 1 SCOP 53671 Aspartate/ornithine carbamoyltransferase
2 2 1 0 SCOP 50621 Alanine racemase C-terminal domain-like
2 2 2 0 SCOP 54791 Eukaryotic type KH-domain (KH-domain type I)
2 2 1 1 SCOP 101904 GyrA/ParC C-terminal domain-like
2 2 1 0 SCOP 81660 Metal cation-transporting ATPase, ATP-binding domain N
2 2 1 0 SCOP 52279 Beta-D-glucan exohydrolase, C-terminal domain
2 2 2 0 SCOP 63380 Riboflavin synthase domain-like
2 2 1 0 SCOP 90002 Hypothetical protein YjiA, C-terminal domain
2 2 2 0 SCOP 63418 MurE/MurF N-terminal domain
2 2 2 0 SCOP 54768 dsRNA-binding domain-like
2 2 2 0 SCOP 141259 CarD-like
2 1 1 1 SCOP 56053 Ribosomal protein L6
2 2 1 0 SCOP 117892 Band 7/SPFH domain
2 2 2 0 SCOP 52025 PA domain
2 1 1 0 SCOP 49493 HSP40/DnaJ peptide-binding domain
2 1 1 0 SCOP 55666 Ribonuclease PH domain 2-like
1 1 1 1 SCOP 56731 DNA primase core
1 1 1 1 SCOP 81338 Aquaporin-like
1 1 1 0 SCOP 57829 Zn-binding ribosomal proteins
1 1 1 1 SCOP 74982 Small protein B (SmpB)
1 1 1 1 SCOP 56808 Ribosomal protein L1
1 1 1 1 SCOP 53178 Peptidyl-tRNA hydrolase-like
1 1 1 1 SCOP 47973 Ribosomal protein S7
1 1 1 0 SCOP 46911 Ribosomal protein S18
1 1 1 1 SCOP 52141 Uracil-DNA glycosylase-like
1 1 1 1 SCOP 143597 YojJ-like
1 1 1 1 SCOP 56420 Peptide deformylase
1 1 1 0 SCOP 142433 CinA-like
1 1 1 0 SCOP 54197 HIT-like
1 1 1 0 SCOP 82607 YbaB-like
1 1 1 0 SCOP 64376 YlxR-like
1 1 1 0 SCOP 89919 Ribosome-binding factor A, RbfA
1 1 1 1 SCOP 54999 Ribosomal protein S10
1 1 1 1 SCOP 52166 Ribosomal protein L4
1 1 1 0 SCOP 54189 Ribosomal proteins S24e, L23 and L15e
1 1 1 1 SCOP 54570 Ribosomal protein S19
1 1 1 1 SCOP 54843 Ribosomal protein L22
1 1 1 1 SCOP 54686 Ribosomal protein L16p/L10e
1 1 1 1 SCOP 50193 Ribosomal protein L14
1 1 1 1 SCOP 55282 RL5-like
1 1 1 1 SCOP 56047 Ribosomal protein S8
1 1 1 1 SCOP 52080 Ribosomal proteins L15p and L18e
1 1 1 0 SCOP 103491 Preprotein translocase SecY subunit
1 1 1 0 SCOP 57840 Ribosomal protein L36
1 1 1 0 SCOP 64263 Prokaryotic ribosomal protein L17
1 1 1 0 SCOP 143034 L35p-like
1 1 1 1 SCOP 74731 Ribosomal protein L20
1 1 1 0 SCOP 56214 4'-phosphopantetheinyl transferase
1 1 1 1 SCOP 55831 Thymidylate synthase/dCMP hydroxymethylase
1 1 1 0 SCOP 53597 Dihydrofolate reductase-like
1 1 1 0 SCOP 141091 L21p-like
1 1 1 0 SCOP 118010 TM1457-like
1 1 1 0 SCOP 110324 Ribosomal L27 protein-like
1 1 1 0 SCOP 143800 L28p-like
1 1 1 0 SCOP 47336 ACP-like
1 1 1 1 SCOP 82549 DAK1/DegV-like
1 1 1 1 SCOP 75625 YebC-like
1 1 1 1 SCOP 82649 SufE/NifU
1 1 1 1 SCOP 47729 IHF-like DNA-binding proteins
1 1 1 1 SCOP 160369 Ribosomal protein L10-like
1 1 1 0 SCOP 46992 Ribosomal protein S20
1 1 1 0 SCOP 52943 ATP synthase (F1-ATPase), gamma subunit
1 1 1 1 SCOP 52161 Ribosomal protein L13
1 1 1 1 SCOP 47060 S15/NS1 RNA-binding domain
1 1 1 1 SCOP 51351 Triosephosphate isomerase (TIM)
1 1 1 1 SCOP 55194 Ribosome recycling factor, RRF
1 1 1 0 SCOP 54565 Ribosomal protein S16
1 1 1 0 SCOP 69765 IpsF-like
1 1 1 0 SCOP 52821 Rhodanese/Cell cycle control phosphatase
1 1 1 1 SCOP 55821 YrdC/RibB
1 1 1 0 SCOP 53720 ALDH-like
1 1 1 0 SCOP 51283 dUTPase-like
1 1 1 0 SCOP 48150 DNA-glycosylase
1 1 1 1 SCOP 111337 QueA-like
1 1 1 1 SCOP 51713 tRNA-guanine transglycosylase
1 1 1 1 SCOP 50715 Ribosomal protein L25-like
1 1 1 1 SCOP 51412 Inosine monophosphate dehydrogenase (IMPDH)
1 1 1 0 SCOP 56276 S-adenosylmethionine decarboxylase
1 1 1 1 SCOP 52313 Ribosomal protein S2
1 1 1 1 SCOP 64005 Undecaprenyl diphosphate synthase
1 1 1 0 SCOP 54285 MoaD/ThiS
1 1 1 1 SCOP 56655 Carbohydrate phosphatase
1 1 1 1 SCOP 102705 NIF3 (NGG1p interacting factor 3)-like
1 1 1 1 SCOP 55205 EPT/RTPC-like
1 1 1 1 SCOP 55298 YjgF-like
1 1 1 1 SCOP 48576 Terpenoid synthases
1 1 1 0 SCOP 55129 Ribosomal protein L30p/L7e
1 1 1 0 SCOP 46561 Ribosomal protein L29 (L29p)
1 1 1 0 SCOP 54995 Ribosomal protein S6
1 1 1 0 SCOP 48371 ARM repeat
1 1 1 1 SCOP 69500 DTD-like
1 1 1 1 SCOP 53328 Formyltransferase
1 1 1 0 SCOP 159468 AtpF-like
1 1 1 1 SCOP 53774 Glutaminase/Asparaginase
1 1 1 0 SCOP 56317 Carbon-nitrogen hydrolase
1 1 1 0 SCOP 51182 RmlC-like cupins
1 1 1 0 SCOP 110849 ParB/Sulfiredoxin
1 1 1 0 SCOP 88713 Glycoside hydrolase/deacetylase
1 1 1 0 SCOP 103486 V-type ATP synthase subunit C
1 1 1 0 SCOP 55257 RBP11-like subunits of RNA polymerase
1 1 1 0 SCOP 56529 FAH
1 1 1 0 SCOP 64153 YjeF N-terminal domain-like
1 1 1 0 SCOP 58113 Apolipoprotein A-I
1 1 1 0 SCOP 69618 HemD-like
1 1 1 1 SCOP 52768 Arginase/deacetylase
1 1 1 0 SCOP 52058 L domain-like
1 1 1 1 SCOP 55909 Pentein
1 1 1 0 SCOP 52788 Phosphotyrosine protein phosphatases I
1 1 1 0 SCOP 63562 RPB6/omega subunit-like
1 1 1 1 SCOP 55931 Glutamine synthetase/guanido kinase
1 1 1 0 SCOP 102405 MCP/YpsA-like
1 1 1 1 SCOP 53795 PEP carboxykinase-like
1 1 1 0 SCOP 103642 Sec-C motif
1 1 1 0 SCOP 54593 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
1 1 1 0 SCOP 46955 Putative DNA-binding domain
1 1 1 0 SCOP 54909 Dimeric alpha+beta barrel
1 1 1 1 SCOP 50494 Trypsin-like serine proteases
1 1 1 0 SCOP 52255 N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)
1 1 1 0 SCOP 82771 GIY-YIG endonuclease
1 1 1 1 SCOP 88946 Sigma2 domain of RNA polymerase sigma factors
1 1 1 0 SCOP 46767 Methylated DNA-protein cysteine methyltransferase, C-terminal domain
1 1 1 0 SCOP 55166 Hedgehog/DD-peptidase
1 1 1 0 SCOP 53300 vWA-like
1 1 1 1 SCOP 52507 Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
1 1 1 1 SCOP 81340 Clc chloride channel
1 1 1 0 SCOP 54913 GlnB-like
1 1 1 0 SCOP 116842 XseB-like
1 1 1 1 SCOP 110399 ThiG-like
1 1 1 0 SCOP 53218 Molybdenum cofactor biosynthesis proteins
1 1 1 0 SCOP 54736 ClpS-like
1 1 1 1 SCOP 111304 Recombination protein RecR
1 1 1 0 SCOP 111069 Hypothetical protein yfbM
1 1 1 0 SCOP 50800 PK beta-barrel domain-like
1 1 1 0 SCOP 49879 SMAD/FHA domain
1 1 1 0 SCOP 55200 Translation initiation factor IF3, C-terminal domain
1 1 1 1 SCOP 51391 Thiamin phosphate synthase
1 1 1 0 SCOP 88697 PUA domain-like
1 1 1 0 SCOP 81330 Gated mechanosensitive channel
1 1 1 0 SCOP 48600 Chorismate mutase II
1 1 1 0 SCOP 55826 YbaK/ProRS associated domain
1 1 1 1 SCOP 56645 Acyl-CoA dehydrogenase NM domain-like
1 1 1 1 SCOP 89796 CoA-transferase family III (CaiB/BaiF)
1 1 1 0 SCOP 52335 Methylglyoxal synthase-like
1 1 1 0 SCOP 140931 Fic-like
1 1 1 1 SCOP 53323 Pyruvate-ferredoxin oxidoreductase, PFOR, domain III
1 1 1 1 SCOP 143631 ApbE-like
1 1 1 0 SCOP 144010 CofE-like
1 1 1 0 SCOP 140683 SP0561-like
1 1 1 0 SCOP 69322 Tricorn protease domain 2
1 1 1 1 SCOP 53182 Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase)
1 1 1 0 SCOP 64288 Chorismate lyase-like
1 1 1 1 SCOP 101473 DhaL-like
1 1 1 1 SCOP 51219 TRAP-like
1 1 1 0 SCOP 50486 FMT C-terminal domain-like
1 1 1 0 SCOP 75471 YhbY-like
1 1 1 0 SCOP 69754 Ribosome binding protein Y (YfiA homologue)
1 1 1 1 SCOP 110395 CutC-like
1 1 1 0 SCOP 82171 DPP6 N-terminal domain-like
1 1 1 0 SCOP 55136 Probable bacterial effector-binding domain
1 1 1 1 SCOP 56091 DNA ligase/mRNA capping enzyme, catalytic domain
1 1 1 0 SCOP 109709 KorB DNA-binding domain-like
1 1 1 0 SCOP 158791 MgtE N-terminal domain-like
1 1 1 0 SCOP 50346 PRC-barrel domain
1 1 1 0 SCOP 143437 THUMP domain-like
1 1 1 1 SCOP 52490 Tubulin nucleotide-binding domain-like
1 1 1 0 SCOP 52777 CoA-dependent acyltransferases
1 1 1 0 SCOP 53092 Creatinase/prolidase N-terminal domain
1 1 1 1 SCOP 50465 EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
1 1 1 1 SCOP 47203 Acyl-CoA dehydrogenase C-terminal domain-like
1 1 1 0 SCOP 50199 Staphylococcal nuclease
1 1 1 0 SCOP 48024 N-terminal domain of DnaB helicase
1 1 1 0 SCOP 143865 CorA soluble domain-like
1 1 1 1 SCOP 56712 Prokaryotic type I DNA topoisomerase
1 1 1 1 SCOP 51690 Nicotinate/Quinolinate PRTase C-terminal domain-like
1 1 1 0 SCOP 57938 DnaJ/Hsp40 cysteine-rich domain
1 1 1 0 SCOP 81923 Double Clp-N motif
1 1 1 0 SCOP 55608 Homing endonucleases
1 1 1 0 SCOP 82114 Riboflavin kinase-like
1 1 1 1 SCOP 46906 Ribosomal protein L11, C-terminal domain
1 1 1 0 SCOP 160443 SMR domain-like
1 1 1 0 SCOP 63825 YWTD domain
1 1 1 1 SCOP 102645 CoaB-like
1 1 1 0 SCOP 118352 HSP33 redox switch-like
1 1 1 0 SCOP 56014 Nitrite and sulphite reductase 4Fe-4S domain-like
1 1 1 1 SCOP 54821 Ribosomal protein S3 C-terminal domain
1 1 1 0 SCOP 81573 F1F0 ATP synthase subunit B, membrane domain
1 1 1 0 SCOP 52935 PK C-terminal domain-like
1 1 1 0 SCOP 118116 DNA mismatch repair protein MutL
1 1 1 0 SCOP 81336 F1F0 ATP synthase subunit A
1 1 1 0 SCOP 47789 C-terminal domain of RNA polymerase alpha subunit
1 1 1 0 SCOP 51344 Epsilon subunit of F1F0-ATP synthase N-terminal domain
1 1 1 0 SCOP 52129 Caspase-like
1 1 1 0 SCOP 55658 L9 N-domain-like
1 1 1 0 SCOP 52440 PreATP-grasp domain
1 1 1 1 SCOP 82679 N-utilization substance G protein NusG, N-terminal domain
1 1 1 0 SCOP 55190 Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain
1 1 1 0 SCOP 69055 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain
1 1 1 0 SCOP 158499 DnaD domain-like
1 1 1 1 SCOP 52418 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
1 1 1 0 SCOP 58014 Coiled-coil domain of nucleotide exchange factor GrpE
1 1 1 0 SCOP 63999 Thiamin pyrophosphokinase, catalytic domain
1 1 1 1 SCOP 161093 MgtE membrane domain-like
1 1 1 1 SCOP 55307 Tubulin C-terminal domain-like
1 1 1 1 SCOP 140990 FtsH protease domain-like
1 1 1 0 SCOP 142984 Nqo1 middle domain-like
1 1 1 0 SCOP 48163 An anticodon-binding domain of class I aminoacyl-tRNA synthetases
1 1 1 1 SCOP 54826 Enolase N-terminal domain-like
1 1 1 1 SCOP 52029 GroEL apical domain-like
1 1 1 0 SCOP 55060 GHMP Kinase, C-terminal domain
1 1 1 0 SCOP 160148 CPE0013-like
1 1 1 0 SCOP 81891 Poly A polymerase C-terminal region-like
1 1 1 0 SCOP 47979 Iron-dependent repressor protein, dimerization domain
1 1 1 1 SCOP 54810 GMP synthetase C-terminal dimerisation domain
1 1 1 0 SCOP 57825 Aspartate carbamoyltransferase, Regulatory-chain, C-terminal domain
1 1 1 0 SCOP 57863 ArfGap/RecO-like zinc finger
1 1 1 0 SCOP 143548 Serine metabolism enzymes domain
1 1 1 0 SCOP 47364 Domain of the SRP/SRP receptor G-proteins
1 1 1 0 SCOP 48300 Ribosomal protein L7/12, oligomerisation (N-terminal) domain
1 1 1 0 SCOP 63737 Leukotriene A4 hydrolase N-terminal domain
1 1 1 1 SCOP 100920 Heat shock protein 70kD (HSP70), peptide-binding domain
1 1 1 0 SCOP 141322 NfeD domain-like
1 1 1 0 SCOP 144083 Magnesium transport protein CorA, transmembrane region
1 1 1 0 SCOP 46934 UBA-like
1 1 1 0 SCOP 47648 Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
1 1 1 1 SCOP 56327 LDH C-terminal domain-like
1 1 1 0 SCOP 46604 Epsilon subunit of F1F0-ATP synthase C-terminal domain
1 1 1 0 SCOP 51984 MurCD N-terminal domain
1 1 1 0 SCOP 100879 Lesion bypass DNA polymerase (Y-family), little finger domain
1 1 1 0 SCOP 52113 BRCT domain
1 1 1 0 SCOP 54373 FAD-linked reductases, C-terminal domain
1 1 1 0 SCOP 74942 YhbC-like, C-terminal domain
1 1 1 0 SCOP 75420 YhbC-like, N-terminal domain
1 1 1 0 SCOP 81624 N-terminal domain of MutM-like DNA repair proteins
1 1 1 0 SCOP 54752 RecA protein, C-terminal domain
1 1 1 0 SCOP 100934 Heat shock protein 70kD (HSP70), C-terminal subdomain
1 1 1 0 SCOP 102735 Trigger factor ribosome-binding domain
1 1 1 0 SCOP 54680 Pyrimidine nucleoside phosphorylase C-terminal domain
1 1 1 0 SCOP 46557 GreA transcript cleavage protein, N-terminal domain
1 1 1 0 SCOP 54675 Nicotinate/Quinolinate PRTase N-terminal domain-like
1 1 1 0 SCOP 69189 Penicillin-binding protein associated domain
1 1 1 0 SCOP 47807 5' to 3' exonuclease, C-terminal subdomain
1 1 1 1 SCOP 47446 Signal peptide-binding domain
1 1 1 1 SCOP 64397 Hsp33 domain
1 1 1 0 SCOP 54991 Anticodon-binding domain of PheRS
1 1 1 0 SCOP 82708 R3H domain
1 1 1 1 SCOP 55271 DNA repair protein MutS, domain I
1 1 1 1 SCOP 82051 Obg GTP-binding protein N-terminal domain
1 1 1 0 SCOP 142019 Nqo1 FMN-binding domain-like
1 1 1 0 SCOP 55261 GAD domain-like
1 1 1 1 SCOP 54713 Elongation factor Ts (EF-Ts), dimerisation domain
1 1 1 0 SCOP 110942 HSP90 C-terminal domain
1 1 1 1 SCOP 54747 Ribosomal L11/L12e N-terminal domain
1 1 1 1 SCOP 75553 Smc hinge domain
1 1 1 0 SCOP 48168 R1 subunit of ribonucleotide reductase, N-terminal domain
1 1 1 1 SCOP 81886 Helical scaffold and wing domains of SecA
1 1 1 1 SCOP 56194 Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain
1 1 1 0 SCOP 52156 Initiation factor IF2/eIF5b, domain 3
1 1 1 0 SCOP 64586 C-terminal domain of ProRS
1 1 1 0 SCOP 51064 Head domain of nucleotide exchange factor GrpE
1 1 1 0 SCOP 55653 Ribosomal protein L9 C-domain
1 1 1 0 SCOP 75445 D-ribose-5-phosphate isomerase (RpiA), lid domain
1 1 1 0 SCOP 143517 TRCF domain-like
1 1 1 1 SCOP 101353 Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
1 1 1 0 SCOP 56553 Insert subdomain of RNA polymerase alpha subunit
1 1 1 0 SCOP 46929 DNA helicase RuvA subunit, C-terminal domain
1 1 1 0 SCOP 101821 Aminopeptidase/glucanase lid domain
1 1 1 0 SCOP 54893 Aspartate carbamoyltransferase, Regulatory-chain, N-terminal domain
1 1 1 0 SCOP 54364 Translation initiation factor IF3, N-terminal domain
1 1 1 1 SCOP 69705 Transcription factor NusA, N-terminal domain
1 1 1 0 SCOP 53150 DNA repair protein MutS, domain II
1 1 1 1 SCOP 81767 Pre-protein crosslinking domain of SecA
1 1 1 0 SCOP 56519 Penicillin binding protein dimerisation domain
1 1 1 0 SCOP 81799 Putative methyltransferase TM0872, insert domain
1 1 1 0 SCOP 82829 MesJ substrate recognition domain-like
1 1 1 0 SCOP 102741 Obg GTP-binding protein C-terminal domain
1 1 1 0 SCOP 46915 Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3
1 1 1 0 SCOP 160996 HI0933 insert domain-like

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The following superfamilies have one or more weak hits:

SCOP superfamily Myosin rod fragments
SCOP superfamily eEF1-gamma domain
SCOP superfamily Antibiotic binding domain of TipA-like multidrug resistance regulators
SCOP superfamily Zn-finger domain of Sec23/24
SCOP superfamily beta-sandwich domain of Sec23/24
SCOP superfamily Cytochrome c oxidase subunit I-like
SCOP superfamily Voltage-gated potassium channels
SCOP superfamily Cell wall binding repeat
SCOP superfamily SAP domain
SCOP superfamily Thiamin pyrophosphokinase, substrate-binding domain
SCOP superfamily Methyl-accepting chemotaxis protein (MCP) signaling domain
SCOP superfamily Bacterial hemolysins
SCOP superfamily Delta-sleep-inducing peptide immunoreactive peptide
SCOP superfamily Tropomyosin
SCOP superfamily Inhibitor of apoptosis (IAP) repeat
SCOP superfamily B-box zinc-binding domain
SCOP superfamily Elafin-like
SCOP superfamily delta-Endotoxin (insectocide), N-terminal domain
SCOP superfamily HydB/Nqo4-like
SCOP superfamily PurM N-terminal domain-like
SCOP superfamily Acylphosphatase/BLUF domain-like
SCOP superfamily Chalcone isomerase
SCOP superfamily NTF2-like
SCOP superfamily Penicillin-binding protein 2x (pbp-2x), c-terminal domain
SCOP superfamily LysM domain
SCOP superfamily Formate dehydrogenase/DMSO reductase, domains 1-3
SCOP superfamily Methylated DNA-protein cysteine methyltransferase domain
SCOP superfamily Cobalamin (vitamin B12)-binding domain
SCOP superfamily Single hybrid motif
SCOP superfamily Lipocalins
SCOP superfamily ADC-like
SCOP superfamily Actin-crosslinking proteins
SCOP superfamily Sm-like ribonucleoproteins
SCOP superfamily Soluble secreted chemokine inhibitor, VCCI
SCOP superfamily Virus attachment protein globular domain
SCOP superfamily Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor
SCOP superfamily Bacterial adhesins
SCOP superfamily Cadherin-like
SCOP superfamily Transglutaminase, two C-terminal domains
SCOP superfamily Multiheme cytochromes
SCOP superfamily GST C-terminal domain-like
SCOP superfamily Ribbon-helix-helix
SCOP superfamily EF-hand
SCOP superfamily Apolipoprotein
SCOP superfamily Prefoldin
SCOP superfamily YfgJ-like
SCOP superfamily Cation efflux protein transmembrane domain-like
SCOP superfamily ATP synthase D chain-like
SCOP superfamily MalF N-terminal region-like
SCOP superfamily V-type ATPase subunit E-like
SCOP superfamily FdhE-like
SCOP superfamily YwmB-like
SCOP superfamily Pentapeptide repeat-like
SCOP superfamily IpaD-like
SCOP superfamily TM0693-like
SCOP superfamily MW0975(SA0943)-like
SCOP superfamily OmpH-like
SCOP superfamily Toprim domain
SCOP superfamily Oligoxyloglucan reducing end-specific cellobiohydrolase
SCOP superfamily PhoU-like
SCOP superfamily BAR/IMD domain-like
SCOP superfamily 2-methylcitrate dehydratase PrpD
SCOP superfamily Cell division protein ZapA-like
SCOP superfamily JAB1/MPN domain
SCOP superfamily Adhesin YadA, collagen-binding domain
SCOP superfamily Methenyltetrahydrofolate cyclohydrolase-like

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