SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.


Bacteroides uniformis superfamily assignments

Taxonomy
Taxonomy browser entry

Bacteria; FCB group; Bacteroidetes/Chlorobi group; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides uniformis

Downloads
Fasta format sequences
Domain assignments


Jump to [ Top of page · Domain assignments ]

Assignment statistics

Sequences: 11 total
6 (55 %) with assignment
285 average length
39 % amino acid coverage
Domains: 7 total
6 unique superfamilies
0 unique families
204 average length
1.2 average superfamily size
14 % formed by duplication
Domain combinations: 1 domain pairs
7 unique architectures

Jump to [ Top of page · Assignment statistics ]

Superfamily assignments

Domains

Proteins

Architectures

Families

SCOP link

Superfamilies

2 2 2 0 SCOP 57783 Zinc beta-ribbon
1 1 1 0 SCOP 52540 P-loop containing nucleoside triphosphate hydrolases
1 1 1 0 SCOP 56731 DNA primase core
1 1 1 0 SCOP 46955 Putative DNA-binding domain
1 1 1 0 SCOP 56349 DNA breaking-rejoining enzymes
1 1 1 0 SCOP 140931 Fic-like

Jump to [ Top of page · Assignment statistics ]


The following superfamilies have one or more weak hits:

SCOP superfamily Translin
SCOP superfamily Protein kinase-like (PK-like)
SCOP superfamily Origin of replication-binding domain, RBD-like
SCOP superfamily Domain of the SRP/SRP receptor G-proteins
SCOP superfamily AGR C 984p-like

Jump to [ Top of page · Assignment statistics ]