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Taylorella asinigenitalis MCE3 superfamily assignments

Taxonomy
Taxonomy browser entry

Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Taylorella; Taylorella asinigenitalis; Taylorella asinigenitalis MCE3

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Fasta format sequences
Domain assignments


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Assignment statistics

Sequences: 1524 total
1078 (71 %) with assignment
328 average length
65 % amino acid coverage
Domains: 1657 total
576 unique superfamilies
407 unique families
301 average length
2.9 average superfamily size
65 % formed by duplication
Domain combinations: 334 domain pairs
707 unique architectures

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Superfamily assignments

Domains

Proteins

Architectures

Families

SCOP link

Superfamilies

146 126 52 7 SCOP 52540 P-loop containing nucleoside triphosphate hydrolases
37 28 20 4 SCOP 50249 Nucleic acid-binding proteins
34 34 8 8 SCOP 53335 S-adenosyl-L-methionine-dependent methyltransferases
32 31 18 9 SCOP 51735 NAD(P)-binding Rossmann-fold domains
27 9 9 0 SCOP 101967 Adhesin YadA, collagen-binding domain
25 25 6 1 SCOP 53850 Periplasmic binding protein-like II
24 21 3 1 SCOP 161098 MetI-like
21 12 9 1 SCOP 46626 Cytochrome c
18 17 8 1 SCOP 52833 Thioredoxin-like
18 17 11 1 SCOP 46785 "Winged helix" DNA-binding domain
17 10 6 2 SCOP 53067 Actin-like ATPase domain
17 15 14 6 SCOP 54211 Ribosomal protein S5 domain 2-like
16 16 11 3 SCOP 52374 Nucleotidylyl transferase
15 14 3 5 SCOP 53383 PLP-dependent transferases
14 14 9 4 SCOP 51905 FAD/NAD(P)-binding domain
14 9 4 1 SCOP 81901 HCP-like
14 10 10 0 SCOP 55021 ACT-like
12 12 8 2 SCOP 52402 Adenine nucleotide alpha hydrolases-like
12 12 9 2 SCOP 55681 Class II aaRS and biotin synthetases
11 10 8 2 SCOP 50447 Translation proteins
10 5 4 4 SCOP 52518 Thiamin diphosphate-binding fold (THDP-binding)
10 10 10 0 SCOP 54523 Pili subunits
9 9 8 1 SCOP 55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
9 8 7 3 SCOP 81301 Nucleotidyltransferase
8 7 5 3 SCOP 56059 Glutathione synthetase ATP-binding domain-like
8 8 2 3 SCOP 53098 Ribonuclease H-like
8 8 4 4 SCOP 51161 Trimeric LpxA-like enzymes
8 8 1 1 SCOP 53756 UDP-Glycosyltransferase/glycogen phosphorylase
8 7 7 1 SCOP 54534 FKBP-like
8 4 3 0 SCOP 141571 Pentapeptide repeat-like
8 6 5 0 SCOP 50156 PDZ domain-like
8 4 2 0 SCOP 69279 Phage tail proteins
7 7 3 2 SCOP 53271 PRTase-like
7 7 3 3 SCOP 55120 Pseudouridine synthase
7 7 4 3 SCOP 75217 alpha/beta knot
7 7 4 1 SCOP 54862 4Fe-4S ferredoxins
7 6 4 0 SCOP 48452 TPR-like
7 7 2 2 SCOP 102114 Radical SAM enzymes
7 7 2 0 SCOP 55729 Acyl-CoA N-acyltransferases (Nat)
7 7 4 1 SCOP 52172 CheY-like
7 4 3 1 SCOP 54980 EF-G C-terminal domain-like
6 6 3 5 SCOP 51556 Metallo-dependent hydrolases
6 6 2 0 SCOP 56784 HAD-like
6 6 2 0 SCOP 103473 MFS general substrate transporter
6 6 5 4 SCOP 56235 N-terminal nucleophile aminohydrolases (Ntn hydrolases)
6 6 6 1 SCOP 109604 HD-domain/PDEase-like
6 6 3 1 SCOP 46894 C-terminal effector domain of the bipartite response regulators
6 6 5 1 SCOP 53955 Lysozyme-like
6 6 1 1 SCOP 53822 Periplasmic binding protein-like I
6 5 3 1 SCOP 53244 MurD-like peptide ligases, peptide-binding domain
6 4 3 1 SCOP 82866 Multidrug efflux transporter AcrB transmembrane domain
6 6 5 1 SCOP 47323 Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
6 6 5 0 SCOP 47384 Homodimeric domain of signal transducing histidine kinase
6 5 3 1 SCOP 52440 PreATP-grasp domain
6 6 3 2 SCOP 55347 Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
6 5 3 2 SCOP 53623 MurD-like peptide ligases, catalytic domain
6 2 1 1 SCOP 53738 Phosphoglucomutase, first 3 domains
6 2 2 0 SCOP 82693 Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
5 5 2 2 SCOP 53474 alpha/beta-Hydrolases
5 5 2 5 SCOP 51569 Aldolase
5 5 2 2 SCOP 53448 Nucleotide-diphospho-sugar transferases
5 5 5 1 SCOP 52317 Class I glutamine amidotransferase-like
5 5 4 3 SCOP 50104 Translation proteins SH3-like domain
5 5 3 5 SCOP 53659 Isocitrate/Isopropylmalate dehydrogenase-like
5 5 3 1 SCOP 55174 Alpha-L RNA-binding motif
5 5 2 2 SCOP 52096 ClpP/crotonase
5 5 2 0 SCOP 56935 Porins
5 5 2 1 SCOP 51395 FMN-linked oxidoreductases
5 5 4 2 SCOP 51306 LexA/Signal peptidase
5 5 4 0 SCOP 54631 CBS-domain pair
5 5 5 1 SCOP 56601 beta-lactamase/transpeptidase-like
5 5 2 0 SCOP 47413 lambda repressor-like DNA-binding domains
5 5 5 1 SCOP 51230 Single hybrid motif
5 5 5 0 SCOP 47781 RuvA domain 2-like
5 5 3 0 SCOP 69349 Phage fibre proteins
5 5 2 2 SCOP 48179 6-phosphogluconate dehydrogenase C-terminal domain-like
5 5 3 1 SCOP 56176 FAD-binding/transporter-associated domain-like
5 4 3 1 SCOP 63380 Riboflavin synthase domain-like
4 4 2 3 SCOP 53697 SIS domain
4 4 2 2 SCOP 47240 Ferritin-like
4 3 3 2 SCOP 100950 NagB/RpiA/CoA transferase-like
4 3 3 0 SCOP 52980 Restriction endonuclease-like
4 4 4 0 SCOP 109998 Triger factor/SurA peptide-binding domain-like
4 4 4 1 SCOP 55486 Metalloproteases ("zincins"), catalytic domain
4 4 2 1 SCOP 53720 ALDH-like
4 4 4 2 SCOP 54292 2Fe-2S ferredoxin-like
4 4 3 0 SCOP 55811 Nudix
4 3 2 1 SCOP 54637 Thioesterase/thiol ester dehydrase-isomerase
4 4 4 0 SCOP 46689 Homeodomain-like
4 4 3 1 SCOP 51419 PLP-binding barrel
4 4 4 2 SCOP 53187 Zn-dependent exopeptidases
4 2 2 0 SCOP 48371 ARM repeat
4 4 2 1 SCOP 55620 Tetrahydrobiopterin biosynthesis enzymes-like
4 4 3 1 SCOP 103088 OmpA-like
4 3 3 1 SCOP 54814 Prokaryotic type KH domain (KH-domain type II)
4 3 3 0 SCOP 55785 PYP-like sensor domain (PAS domain)
4 4 3 1 SCOP 56719 Type II DNA topoisomerase
4 3 3 1 SCOP 56042 PurM C-terminal domain-like
4 3 3 1 SCOP 55326 PurM N-terminal domain-like
4 4 2 0 SCOP 69255 gp5 N-terminal domain-like
4 2 2 0 SCOP 82714 Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
4 4 4 1 SCOP 81271 TGS-like
3 3 3 2 SCOP 53927 Cytidine deaminase-like
3 3 1 1 SCOP 53613 Ribokinase-like
3 3 2 1 SCOP 56112 Protein kinase-like (PK-like)
3 3 2 1 SCOP 51366 Ribulose-phoshate binding barrel
3 3 3 1 SCOP 57716 Glucocorticoid receptor-like (DNA-binding domain)
3 3 1 1 SCOP 47729 IHF-like DNA-binding proteins
3 3 2 0 SCOP 50129 GroES-like
3 3 2 2 SCOP 53633 Carbamate kinase-like
3 3 1 1 SCOP 48557 L-aspartase-like
3 2 2 0 SCOP 52821 Rhodanese/Cell cycle control phosphatase
3 3 3 0 SCOP 51261 Duplicated hybrid motif
3 3 3 1 SCOP 53686 Tryptophan synthase beta subunit-like PLP-dependent enzymes
3 3 3 0 SCOP 51621 Phosphoenolpyruvate/pyruvate domain
3 3 1 1 SCOP 48576 Terpenoid synthases
3 3 2 2 SCOP 50475 FMN-binding split barrel
3 3 1 1 SCOP 55469 FMN-dependent nitroreductase-like
3 3 3 1 SCOP 53328 Formyltransferase
3 3 3 0 SCOP 56317 Carbon-nitrogen hydrolase
3 3 1 2 SCOP 52972 ITPase-like
3 2 2 0 SCOP 51126 Pectin lyase-like
3 3 2 0 SCOP 88713 Glycoside hydrolase/deacetylase
3 3 3 0 SCOP 52954 Class II aaRS ABD-related
3 3 3 1 SCOP 52016 LeuD/IlvD-like
3 3 3 1 SCOP 88946 Sigma2 domain of RNA polymerase sigma factors
3 3 2 1 SCOP 56349 DNA breaking-rejoining enzymes
3 2 2 2 SCOP 49503 Cupredoxins
3 2 2 0 SCOP 103481 Multidrug resistance efflux transporter EmrE
3 2 2 0 SCOP 88659 Sigma3 and sigma4 domains of RNA polymerase sigma factors
3 3 2 1 SCOP 140931 Fic-like
3 2 2 2 SCOP 53901 Thiolase-like
3 3 2 1 SCOP 55424 FAD/NAD-linked reductases, dimerisation (C-terminal) domain
3 3 2 1 SCOP 52343 Ferredoxin reductase-like, C-terminal NADP-linked domain
3 3 2 0 SCOP 46589 tRNA-binding arm
3 1 1 0 SCOP 55979 DNA clamp
3 3 1 1 SCOP 51246 Rudiment single hybrid motif
3 3 2 2 SCOP 53223 Aminoacid dehydrogenase-like, N-terminal domain
3 3 2 1 SCOP 48019 post-AAA+ oligomerization domain-like
3 3 2 1 SCOP 52922 TK C-terminal domain-like
3 1 1 1 SCOP 55973 S-adenosylmethionine synthetase
3 3 2 2 SCOP 50621 Alanine racemase C-terminal domain-like
3 3 1 1 SCOP 51984 MurCD N-terminal domain
3 3 2 0 SCOP 117892 Band 7/SPFH domain
3 3 2 1 SCOP 50677 ValRS/IleRS/LeuRS editing domain
3 2 2 0 SCOP 49493 HSP40/DnaJ peptide-binding domain
3 2 2 0 SCOP 55666 Ribonuclease PH domain 2-like
2 2 2 0 SCOP 48013 NusB-like
2 2 1 0 SCOP 57829 Zn-binding ribosomal proteins
2 2 2 1 SCOP 53790 Tetrapyrrole methylase
2 2 2 1 SCOP 52141 Uracil-DNA glycosylase-like
2 2 1 0 SCOP 54197 HIT-like
2 2 1 1 SCOP 53137 Translational machinery components
2 2 2 1 SCOP 55920 Creatinase/aminopeptidase
2 2 2 1 SCOP 46946 S13-like H2TH domain
2 2 1 0 SCOP 56300 Metallo-dependent phosphatases
2 2 1 0 SCOP 69593 Glycerol-3-phosphate (1)-acyltransferase
2 2 2 1 SCOP 53597 Dihydrofolate reductase-like
2 2 1 0 SCOP 143800 L28p-like
2 2 1 1 SCOP 75620 Release factor
2 2 2 2 SCOP 64484 beta and beta-prime subunits of DNA dependent RNA-polymerase
2 2 2 1 SCOP 55821 YrdC/RibB
2 2 2 1 SCOP 111283 Putative modulator of DNA gyrase, PmbA/TldD
2 2 1 1 SCOP 51283 dUTPase-like
2 2 1 1 SCOP 89360 HesB-like domain
2 2 2 1 SCOP 50715 Ribosomal protein L25-like
2 2 2 1 SCOP 56281 Metallo-hydrolase/oxidoreductase
2 2 1 1 SCOP 56655 Carbohydrate phosphatase
2 2 1 0 SCOP 82657 BolA-like
2 2 2 1 SCOP 50685 Barwin-like endoglucanases
2 2 2 0 SCOP 50182 Sm-like ribonucleoproteins
2 1 1 0 SCOP 56801 Acetyl-CoA synthetase-like
2 2 1 0 SCOP 55315 L30e-like
2 2 2 1 SCOP 56672 DNA/RNA polymerases
2 2 1 1 SCOP 51726 UROD/MetE-like
2 2 2 0 SCOP 88723 PIN domain-like
2 2 2 1 SCOP 51445 (Trans)glycosidases
2 2 1 1 SCOP 69572 Activating enzymes of the ubiquitin-like proteins
2 2 2 0 SCOP 57997 Tropomyosin
2 2 2 1 SCOP 51182 RmlC-like cupins
2 2 2 0 SCOP 55781 GAF domain-like
2 2 2 0 SCOP 110849 ParB/Sulfiredoxin
2 2 1 0 SCOP 81343 Fumarate reductase respiratory complex transmembrane subunits
2 2 1 1 SCOP 56529 FAH
2 2 2 0 SCOP 55961 Bet v1-like
2 2 1 1 SCOP 52768 Arginase/deacetylase
2 2 2 2 SCOP 52283 Formate/glycerate dehydrogenase catalytic domain-like
2 2 2 2 SCOP 55931 Glutamine synthetase/guanido kinase
2 2 2 1 SCOP 81342 Transmembrane di-heme cytochromes
2 1 1 0 SCOP 81648 a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
2 2 2 1 SCOP 102405 MCP/YpsA-like
2 2 2 0 SCOP 46955 Putative DNA-binding domain
2 2 2 1 SCOP 54909 Dimeric alpha+beta barrel
2 2 2 1 SCOP 50494 Trypsin-like serine proteases
2 2 2 0 SCOP 50022 ISP domain
2 2 2 0 SCOP 89550 PHP domain-like
2 2 2 0 SCOP 53300 vWA-like
2 2 1 1 SCOP 56954 Outer membrane efflux proteins (OEP)
2 2 2 1 SCOP 52507 Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
2 2 2 1 SCOP 52467 DHS-like NAD/FAD-binding domain
2 2 2 1 SCOP 53732 Aconitase iron-sulfur domain
2 2 1 1 SCOP 56219 DNase I-like
2 2 2 1 SCOP 111369 HlyD-like secretion proteins
2 2 2 1 SCOP 51391 Thiamin phosphate synthase
2 2 1 0 SCOP 50969 YVTN repeat-like/Quinoprotein amine dehydrogenase
2 2 2 1 SCOP 88697 PUA domain-like
2 2 2 0 SCOP 89095 GatB/YqeY motif
2 2 2 0 SCOP 89392 Prokaryotic lipoproteins and lipoprotein localization factors
2 2 2 0 SCOP 51338 Composite domain of metallo-dependent hydrolases
2 2 1 1 SCOP 118215 Proton glutamate symport protein
2 2 2 1 SCOP 103025 Folate-binding domain
2 2 2 1 SCOP 52335 Methylglyoxal synthase-like
2 1 1 1 SCOP 81593 Nucleotidyltransferase substrate binding subunit/domain
2 2 1 0 SCOP 50331 MOP-like
2 1 1 0 SCOP 89963 YajQ-like
2 1 1 0 SCOP 56024 Phospholipase D/nuclease
2 2 2 0 SCOP 103515 Autotransporter
2 2 1 0 SCOP 74653 TolA/TonB C-terminal domain
2 2 1 0 SCOP 103370 NinB
2 2 2 1 SCOP 46565 Chaperone J-domain
2 2 2 0 SCOP 52038 Barstar-related
2 2 2 1 SCOP 55186 ThrRS/AlaRS common domain
2 2 2 1 SCOP 52777 CoA-dependent acyltransferases
2 2 1 0 SCOP 47616 GST C-terminal domain-like
2 2 1 1 SCOP 50465 EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
2 2 2 1 SCOP 90123 ABC transporter transmembrane region
2 2 1 0 SCOP 55103 FAD-linked oxidases, C-terminal domain
2 2 2 0 SCOP 54106 LysM domain
2 2 2 0 SCOP 52009 Phosphohistidine domain
2 1 1 0 SCOP 53681 Aspartate/glutamate racemase
2 2 2 1 SCOP 52210 Succinyl-CoA synthetase domains
2 2 2 0 SCOP 47090 PGBD-like
2 2 1 1 SCOP 53671 Aspartate/ornithine carbamoyltransferase
2 2 2 0 SCOP 81891 Poly A polymerase C-terminal region-like
2 2 2 1 SCOP 56425 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
2 2 1 1 SCOP 101904 GyrA/ParC C-terminal domain-like
2 2 2 1 SCOP 100920 Heat shock protein 70kD (HSP70), peptide-binding domain
2 2 2 0 SCOP 46600 C-terminal UvrC-binding domain of UvrB
2 2 1 0 SCOP 110997 Sporulation related repeat
2 2 1 0 SCOP 90002 Hypothetical protein YjiA, C-terminal domain
2 1 1 0 SCOP 63418 MurE/MurF N-terminal domain
2 2 2 0 SCOP 54768 dsRNA-binding domain-like
2 1 1 0 SCOP 47794 Rad51 N-terminal domain-like
2 2 2 1 SCOP 54373 FAD-linked reductases, C-terminal domain
2 1 1 1 SCOP 56053 Ribosomal protein L6
2 2 2 1 SCOP 100934 Heat shock protein 70kD (HSP70), C-terminal subdomain
2 2 1 0 SCOP 55957 Phosphoglucomutase, C-terminal domain
2 2 2 0 SCOP 46557 GreA transcript cleavage protein, N-terminal domain
2 2 1 0 SCOP 50615 N-terminal domain of alpha and beta subunits of F1 ATP synthase
2 1 1 1 SCOP 54713 Elongation factor Ts (EF-Ts), dimerisation domain
2 2 1 1 SCOP 47917 C-terminal domain of alpha and beta subunits of F1 ATP synthase
2 2 2 0 SCOP 47005 Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
2 2 2 0 SCOP 56519 Penicillin binding protein dimerisation domain
1 1 1 1 SCOP 56731 DNA primase core
1 1 1 0 SCOP 55594 HPr-like
1 1 1 1 SCOP 74982 Small protein B (SmpB)
1 1 1 1 SCOP 56808 Ribosomal protein L1
1 1 1 1 SCOP 53178 Peptidyl-tRNA hydrolase-like
1 1 1 1 SCOP 47973 Ribosomal protein S7
1 1 1 0 SCOP 46911 Ribosomal protein S18
1 1 1 1 SCOP 75304 Amidase signature (AS) enzymes
1 1 1 1 SCOP 56420 Peptide deformylase
1 1 1 1 SCOP 142433 CinA-like
1 1 1 1 SCOP 111331 NAD kinase/diacylglycerol kinase-like
1 1 1 1 SCOP 82607 YbaB-like
1 1 1 0 SCOP 89919 Ribosome-binding factor A, RbfA
1 1 1 1 SCOP 54999 Ribosomal protein S10
1 1 1 1 SCOP 52166 Ribosomal protein L4
1 1 1 0 SCOP 54189 Ribosomal proteins S24e, L23 and L15e
1 1 1 1 SCOP 54570 Ribosomal protein S19
1 1 1 1 SCOP 54843 Ribosomal protein L22
1 1 1 1 SCOP 54686 Ribosomal protein L16p/L10e
1 1 1 1 SCOP 50193 Ribosomal protein L14
1 1 1 1 SCOP 55282 RL5-like
1 1 1 1 SCOP 56047 Ribosomal protein S8
1 1 1 1 SCOP 52080 Ribosomal proteins L15p and L18e
1 1 1 0 SCOP 103491 Preprotein translocase SecY subunit
1 1 1 0 SCOP 57840 Ribosomal protein L36
1 1 1 1 SCOP 64263 Prokaryotic ribosomal protein L17
1 1 1 1 SCOP 64182 DHH phosphoesterases
1 1 1 0 SCOP 143034 L35p-like
1 1 1 1 SCOP 74731 Ribosomal protein L20
1 1 1 0 SCOP 56214 4'-phosphopantetheinyl transferase
1 1 1 0 SCOP 89447 AbrB/MazE/MraZ-like
1 1 1 1 SCOP 55831 Thymidylate synthase/dCMP hydroxymethylase
1 1 1 1 SCOP 141091 L21p-like
1 1 1 0 SCOP 110324 Ribosomal L27 protein-like
1 1 1 0 SCOP 47336 ACP-like
1 1 1 1 SCOP 51695 PLC-like phosphodiesterases
1 1 1 1 SCOP 53748 Phosphoglycerate kinase
1 1 1 1 SCOP 75625 YebC-like
1 1 1 1 SCOP 82649 SufE/NifU
1 1 1 1 SCOP 50324 Inorganic pyrophosphatase
1 1 1 1 SCOP 160369 Ribosomal protein L10-like
1 1 1 0 SCOP 46992 Ribosomal protein S20
1 1 1 1 SCOP 52943 ATP synthase (F1-ATPase), gamma subunit
1 1 1 0 SCOP 81333 F1F0 ATP synthase subunit C
1 1 1 1 SCOP 55068 Peptide methionine sulfoxide reductase
1 1 1 1 SCOP 109755 PhoU-like
1 1 1 1 SCOP 52161 Ribosomal protein L13
1 1 1 1 SCOP 47060 S15/NS1 RNA-binding domain
1 1 1 1 SCOP 51351 Triosephosphate isomerase (TIM)
1 1 1 1 SCOP 55194 Ribosome recycling factor, RRF
1 1 1 1 SCOP 54565 Ribosomal protein S16
1 1 1 1 SCOP 51316 Mss4-like
1 1 1 1 SCOP 69765 IpsF-like
1 1 1 1 SCOP 51730 FAD-linked oxidoreductase
1 1 1 1 SCOP 54611 SecB-like
1 1 1 1 SCOP 48150 DNA-glycosylase
1 1 1 1 SCOP 111337 QueA-like
1 1 1 1 SCOP 51713 tRNA-guanine transglycosylase
1 1 1 1 SCOP 56770 HydA/Nqo6-like
1 1 1 1 SCOP 51412 Inosine monophosphate dehydrogenase (IMPDH)
1 1 1 1 SCOP 52313 Ribosomal protein S2
1 1 1 1 SCOP 64005 Undecaprenyl diphosphate synthase
1 1 1 0 SCOP 54285 MoaD/ThiS
1 1 1 0 SCOP 142695 RibA-like
1 1 1 1 SCOP 102705 NIF3 (NGG1p interacting factor 3)-like
1 1 1 1 SCOP 53254 Phosphoglycerate mutase-like
1 1 1 1 SCOP 55205 EPT/RTPC-like
1 1 1 0 SCOP 81345 ABC transporter involved in vitamin B12 uptake, BtuC
1 1 1 0 SCOP 55229 Cell division protein MinE topological specificity domain
1 1 1 1 SCOP 55298 YjgF-like
1 1 1 0 SCOP 64307 SirA-like
1 1 1 1 SCOP 52121 Lumazine synthase
1 1 1 0 SCOP 117991 YbeD/HP0495-like
1 1 1 0 SCOP 55129 Ribosomal protein L30p/L7e
1 1 1 0 SCOP 46561 Ribosomal protein L29 (L29p)
1 1 1 1 SCOP 111148 YggX-like
1 1 1 1 SCOP 54995 Ribosomal protein S6
1 1 1 0 SCOP 55387 Frataxin/Nqo15-like
1 1 1 1 SCOP 56104 SAICAR synthase-like
1 1 1 0 SCOP 52949 Macro domain-like
1 1 1 0 SCOP 63829 Calcium-dependent phosphotriesterase
1 1 1 1 SCOP 48256 Citrate synthase
1 1 1 0 SCOP 48613 Heme oxygenase-like
1 1 1 1 SCOP 50891 Cyclophilin-like
1 1 1 1 SCOP 56634 Heme-dependent catalase-like
1 1 1 0 SCOP 48317 Acid phosphatase/Vanadium-dependent haloperoxidase
1 1 1 1 SCOP 53649 Alkaline phosphatase-like
1 1 1 0 SCOP 54001 Cysteine proteinases
1 1 1 0 SCOP 52499 Isochorismatase-like hydrolases
1 1 1 0 SCOP 48403 Ankyrin repeat
1 1 1 1 SCOP 54506 Diaminopimelate epimerase-like
1 1 1 1 SCOP 53774 Glutaminase/Asparaginase
1 1 1 1 SCOP 56752 D-aminoacid aminotransferase-like PLP-dependent enzymes
1 1 1 0 SCOP 74650 Galactose mutarotase-like
1 1 1 0 SCOP 51197 Clavaminate synthase-like
1 1 1 1 SCOP 54919 Nucleoside diphosphate kinase, NDK
1 1 1 0 SCOP 55257 RBP11-like subunits of RNA polymerase
1 1 1 0 SCOP 55008 HMA, heavy metal-associated domain
1 1 1 0 SCOP 58113 Apolipoprotein A-I
1 1 1 0 SCOP 52266 SGNH hydrolase
1 1 1 1 SCOP 52151 FabD/lysophospholipase-like
1 1 1 0 SCOP 69618 HemD-like
1 1 1 1 SCOP 52788 Phosphotyrosine protein phosphatases I
1 1 1 0 SCOP 63562 RPB6/omega subunit-like
1 1 1 0 SCOP 81442 Cytochrome c oxidase subunit I-like
1 1 1 1 SCOP 53800 Chelatase
1 1 1 0 SCOP 69118 AhpD-like
1 1 1 1 SCOP 143243 Nqo5-like
1 1 1 1 SCOP 51717 Dihydropteroate synthetase-like
1 1 1 1 SCOP 53795 PEP carboxykinase-like
1 1 1 1 SCOP 51998 PFL-like glycyl radical enzymes
1 1 1 0 SCOP 102712 JAB1/MPN domain
1 1 1 1 SCOP 52255 N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)
1 1 1 1 SCOP 56266 DmpA/ArgJ-like
1 1 1 0 SCOP 57783 Zinc beta-ribbon
1 1 1 0 SCOP 143100 TTHA1013/TTHA0281-like
1 1 1 0 SCOP 82771 GIY-YIG endonuclease
1 1 1 1 SCOP 82697 PurS-like
1 1 1 1 SCOP 55083 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK
1 1 1 0 SCOP 50692 ADC-like
1 1 1 1 SCOP 64167 SurE-like
1 1 1 1 SCOP 63892 Pyridoxine 5'-phosphate synthase
1 1 1 0 SCOP 55154 CYTH-like phosphatases
1 1 1 1 SCOP 81340 Clc chloride channel
1 1 1 0 SCOP 51206 cAMP-binding domain-like
1 1 1 0 SCOP 161111 Cation efflux protein transmembrane domain-like
1 1 1 1 SCOP 54913 GlnB-like
1 1 1 0 SCOP 141000 Glu-tRNAGln amidotransferase C subunit
1 1 1 1 SCOP 56762 HydB/Nqo4-like
1 1 1 0 SCOP 116842 XseB-like
1 1 1 1 SCOP 110399 ThiG-like
1 1 1 0 SCOP 54736 ClpS-like
1 1 1 1 SCOP 111304 Recombination protein RecR
1 1 1 0 SCOP 54786 YcfA/nrd intein domain
1 1 1 0 SCOP 49879 SMAD/FHA domain
1 1 1 0 SCOP 69065 RNase III domain-like
1 1 1 1 SCOP 55200 Translation initiation factor IF3, C-terminal domain
1 1 1 0 SCOP 82689 Mechanosensitive channel protein MscS (YggB), C-terminal domain
1 1 1 0 SCOP 50952 Soluble quinoprotein glucose dehydrogenase
1 1 1 0 SCOP 160719 gpW/gp25-like
1 1 1 0 SCOP 158997 Trm112p-like
1 1 1 1 SCOP 53213 LigB-like
1 1 1 0 SCOP 158442 DsbB-like
1 1 1 0 SCOP 102829 Cell division protein ZapA-like
1 1 1 0 SCOP 143456 VC0467-like
1 1 1 0 SCOP 50998 Quinoprotein alcohol dehydrogenase-like
1 1 1 0 SCOP 102400 DNA polymerase III chi subunit
1 1 1 0 SCOP 81330 Gated mechanosensitive channel
1 1 1 0 SCOP 48600 Chorismate mutase II
1 1 1 0 SCOP 109910 YgfY-like
1 1 1 0 SCOP 101307 YutG-like
1 1 1 0 SCOP 110087 DR1885-like metal-binding protein
1 1 1 0 SCOP 55826 YbaK/ProRS associated domain
1 1 1 0 SCOP 56645 Acyl-CoA dehydrogenase NM domain-like
1 1 1 1 SCOP 89796 CoA-transferase family III (CaiB/BaiF)
1 1 1 0 SCOP 101386 all-alpha NTP pyrophosphatases
1 1 1 1 SCOP 140478 LemA-like
1 1 1 0 SCOP 55804 Phoshotransferase/anion transport protein
1 1 1 0 SCOP 48295 TrpR-like
1 1 1 0 SCOP 57802 Rubredoxin-like
1 1 1 1 SCOP 117457 FumA C-terminal domain-like
1 1 1 0 SCOP 111384 OmpH-like
1 1 1 1 SCOP 161070 SNF-like
1 1 1 0 SCOP 75138 HprK N-terminal domain-like
1 1 1 0 SCOP 64288 Chorismate lyase-like
1 1 1 0 SCOP 53062 PTS system fructose IIA component-like
1 1 1 0 SCOP 50486 FMT C-terminal domain-like
1 1 1 1 SCOP 160950 YacF-like
1 1 1 0 SCOP 101738 SspB-like
1 1 1 0 SCOP 64076 MTH938-like
1 1 1 1 SCOP 51604 Enolase C-terminal domain-like
1 1 1 1 SCOP 55846 N-acetylmuramoyl-L-alanine amidase-like
1 1 1 0 SCOP 75471 YhbY-like
1 1 1 0 SCOP 103501 Respiratory nitrate reductase 1 gamma chain
1 1 1 0 SCOP 74863 Thiol:disulfide interchange protein DsbD, N-terminal domain (DsbD-alpha)
1 1 1 1 SCOP 47175 Cytochromes
1 1 1 1 SCOP 56091 DNA ligase/mRNA capping enzyme, catalytic domain
1 1 1 0 SCOP 158710 PSPTO4464-like
1 1 1 0 SCOP 109709 KorB DNA-binding domain-like
1 1 1 0 SCOP 47592 SWIB/MDM2 domain
1 1 1 0 SCOP 53933 Microbial ribonucleases
1 1 1 0 SCOP 158791 MgtE N-terminal domain-like
1 1 1 1 SCOP 141452 Hcp1-like
1 1 1 0 SCOP 144059 ImpE-like
1 1 1 1 SCOP 63992 Dipeptide transport protein
1 1 1 0 SCOP 50346 PRC-barrel domain
1 1 1 1 SCOP 46548 alpha-helical ferredoxin
1 1 1 1 SCOP 52490 Tubulin nucleotide-binding domain-like
1 1 1 0 SCOP 53092 Creatinase/prolidase N-terminal domain
1 1 1 0 SCOP 47203 Acyl-CoA dehydrogenase C-terminal domain-like
1 1 1 0 SCOP 48498 Tetracyclin repressor-like, C-terminal domain
1 1 1 0 SCOP 50199 Staphylococcal nuclease
1 1 1 1 SCOP 69864 Argininosuccinate synthetase, C-terminal domain
1 1 1 1 SCOP 48024 N-terminal domain of DnaB helicase
1 1 1 1 SCOP 48592 GroEL equatorial domain-like
1 1 1 0 SCOP 160113 YegP-like
1 1 1 1 SCOP 56712 Prokaryotic type I DNA topoisomerase
1 1 1 0 SCOP 53706 Formate dehydrogenase/DMSO reductase, domains 1-3
1 1 1 1 SCOP 51690 Nicotinate/Quinolinate PRTase C-terminal domain-like
1 1 1 0 SCOP 57938 DnaJ/Hsp40 cysteine-rich domain
1 1 1 0 SCOP 81923 Double Clp-N motif
1 1 1 0 SCOP 141488 YdhA-like
1 1 1 0 SCOP 82114 Riboflavin kinase-like
1 1 1 0 SCOP 46906 Ribosomal protein L11, C-terminal domain
1 1 1 0 SCOP 160443 SMR domain-like
1 1 1 0 SCOP 69304 Tricorn protease N-terminal domain
1 1 1 1 SCOP 102645 CoaB-like
1 1 1 0 SCOP 118352 HSP33 redox switch-like
1 1 1 0 SCOP 56014 Nitrite and sulphite reductase 4Fe-4S domain-like
1 1 1 1 SCOP 54821 Ribosomal protein S3 C-terminal domain
1 1 1 0 SCOP 81573 F1F0 ATP synthase subunit B, membrane domain
1 1 1 0 SCOP 63848 Cell-division inhibitor MinC, C-terminal domain
1 1 1 0 SCOP 109635 DnaK suppressor protein DksA, alpha-hairpin domain
1 1 1 1 SCOP 81935 N-terminal domain of bifunctional PutA protein
1 1 1 0 SCOP 118116 DNA mismatch repair protein MutL
1 1 1 1 SCOP 81336 F1F0 ATP synthase subunit A
1 1 1 1 SCOP 47789 C-terminal domain of RNA polymerase alpha subunit
1 1 1 1 SCOP 51344 Epsilon subunit of F1F0-ATP synthase N-terminal domain
1 1 1 0 SCOP 51971 Nucleotide-binding domain
1 1 1 0 SCOP 55658 L9 N-domain-like
1 1 1 0 SCOP 81665 Calcium ATPase, transmembrane domain M
1 1 1 0 SCOP 158472 HAMP domain-like
1 1 1 0 SCOP 82679 N-utilization substance G protein NusG, N-terminal domain
1 1 1 0 SCOP 56436 C-type lectin-like
1 1 1 0 SCOP 55190 Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain
1 1 1 0 SCOP 116726 TrkA C-terminal domain-like
1 1 1 0 SCOP 69055 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain
1 1 1 1 SCOP 56037 PheT/TilS domain
1 1 1 1 SCOP 48334 DNA repair protein MutS, domain III
1 1 1 0 SCOP 58014 Coiled-coil domain of nucleotide exchange factor GrpE
1 1 1 0 SCOP 51011 Glycosyl hydrolase domain
1 1 1 0 SCOP 161093 MgtE membrane domain-like
1 1 1 1 SCOP 55307 Tubulin C-terminal domain-like
1 1 1 1 SCOP 140990 FtsH protease domain-like
1 1 1 0 SCOP 142984 Nqo1 middle domain-like
1 1 1 0 SCOP 52964 TolB, N-terminal domain
1 1 1 1 SCOP 54719 Fe,Mn superoxide dismutase (SOD), C-terminal domain
1 1 1 0 SCOP 48163 An anticodon-binding domain of class I aminoacyl-tRNA synthetases
1 1 1 1 SCOP 143968 UbiD C-terminal domain-like
1 1 1 1 SCOP 52021 Carbamoyl phosphate synthetase, small subunit N-terminal domain
1 1 1 0 SCOP 54791 Eukaryotic type KH-domain (KH-domain type I)
1 1 1 1 SCOP 54826 Enolase N-terminal domain-like
1 1 1 0 SCOP 117074 Hypothetical protein PA1324
1 1 1 1 SCOP 52029 GroEL apical domain-like
1 1 1 0 SCOP 55060 GHMP Kinase, C-terminal domain
1 1 1 0 SCOP 68912 Rho N-terminal domain-like
1 1 1 1 SCOP 54810 GMP synthetase C-terminal dimerisation domain
1 1 1 0 SCOP 57863 ArfGap/RecO-like zinc finger
1 1 1 0 SCOP 81660 Metal cation-transporting ATPase, ATP-binding domain N
1 1 1 1 SCOP 46977 Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
1 1 1 0 SCOP 47364 Domain of the SRP/SRP receptor G-proteins
1 1 1 0 SCOP 48300 Ribosomal protein L7/12, oligomerisation (N-terminal) domain
1 1 1 0 SCOP 63737 Leukotriene A4 hydrolase N-terminal domain
1 1 1 0 SCOP 47144 HSC20 (HSCB), C-terminal oligomerisation domain
1 1 1 0 SCOP 46934 UBA-like
1 1 1 1 SCOP 56327 LDH C-terminal domain-like
1 1 1 0 SCOP 46604 Epsilon subunit of F1F0-ATP synthase C-terminal domain
1 1 1 0 SCOP 110921 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain
1 1 1 0 SCOP 54423 DsbC/DsbG N-terminal domain-like
1 1 1 0 SCOP 100879 Lesion bypass DNA polymerase (Y-family), little finger domain
1 1 1 0 SCOP 69075 Glutamyl tRNA-reductase dimerization domain
1 1 1 0 SCOP 52113 BRCT domain
1 1 1 1 SCOP 141259 CarD-like
1 1 1 0 SCOP 82861 Mechanosensitive channel protein MscS (YggB), transmembrane region
1 1 1 0 SCOP 47831 Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain
1 1 1 0 SCOP 74942 YhbC-like, C-terminal domain
1 1 1 0 SCOP 52413 UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
1 1 1 0 SCOP 75420 YhbC-like, N-terminal domain
1 1 1 0 SCOP 81624 N-terminal domain of MutM-like DNA repair proteins
1 1 1 0 SCOP 54752 RecA protein, C-terminal domain
1 1 1 0 SCOP 54782 Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain
1 1 1 0 SCOP 140490 Nqo1C-terminal domain-like
1 1 1 0 SCOP 102735 Trigger factor ribosome-binding domain
1 1 1 1 SCOP 55031 Bacterial exopeptidase dimerisation domain
1 1 1 1 SCOP 143975 IlvD/EDD N-terminal domain-like
1 1 1 0 SCOP 54675 Nicotinate/Quinolinate PRTase N-terminal domain-like
1 1 1 0 SCOP 69189 Penicillin-binding protein associated domain
1 1 1 0 SCOP 55904 Ornithine decarboxylase C-terminal domain
1 1 1 0 SCOP 47807 5' to 3' exonuclease, C-terminal subdomain
1 1 1 1 SCOP 47446 Signal peptide-binding domain
1 1 1 1 SCOP 64397 Hsp33 domain
1 1 1 0 SCOP 54991 Anticodon-binding domain of PheRS
1 1 1 0 SCOP 141986 LD-carboxypeptidase A C-terminal domain-like
1 1 1 1 SCOP 55271 DNA repair protein MutS, domain I
1 1 1 0 SCOP 55048 Probable ACP-binding domain of malonyl-CoA ACP transacylase
1 1 1 0 SCOP 47928 N-terminal domain of the delta subunit of the F1F0-ATP synthase
1 1 1 1 SCOP 48108 Carbamoyl phosphate synthetase, large subunit connection domain
1 1 1 1 SCOP 82051 Obg GTP-binding protein N-terminal domain
1 1 1 1 SCOP 142019 Nqo1 FMN-binding domain-like
1 1 1 1 SCOP 54368 Glutamine synthetase, N-terminal domain
1 1 1 1 SCOP 55261 GAD domain-like
1 1 1 0 SCOP 81653 Calcium ATPase, transduction domain A
1 1 1 1 SCOP 54747 Ribosomal L11/L12e N-terminal domain
1 1 1 1 SCOP 46609 Fe,Mn superoxide dismutase (SOD), N-terminal domain
1 1 1 0 SCOP 69742 Glutamyl tRNA-reductase catalytic, N-terminal domain
1 1 1 0 SCOP 75553 Smc hinge domain
1 1 1 1 SCOP 48168 R1 subunit of ribonucleotide reductase, N-terminal domain
1 1 1 1 SCOP 81886 Helical scaffold and wing domains of SecA
1 1 1 0 SCOP 54849 GroEL-intermediate domain like
1 1 1 1 SCOP 56194 Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain
1 1 1 0 SCOP 89000 post-HMGL domain-like
1 1 1 0 SCOP 52156 Initiation factor IF2/eIF5b, domain 3
1 1 1 0 SCOP 116878 TrmE connector domain
1 1 1 0 SCOP 51064 Head domain of nucleotide exchange factor GrpE
1 1 1 0 SCOP 55653 Ribosomal protein L9 C-domain
1 1 1 0 SCOP 75445 D-ribose-5-phosphate isomerase (RpiA), lid domain
1 1 1 0 SCOP 101790 Aminomethyltransferase beta-barrel domain
1 1 1 1 SCOP 143517 TRCF domain-like
1 1 1 1 SCOP 101353 Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
1 1 1 1 SCOP 56553 Insert subdomain of RNA polymerase alpha subunit
1 1 1 1 SCOP 74778 Aconitase B, N-terminal domain
1 1 1 0 SCOP 64383 Cell-division protein ZipA, C-terminal domain
1 1 1 0 SCOP 46929 DNA helicase RuvA subunit, C-terminal domain
1 1 1 0 SCOP 54364 Translation initiation factor IF3, N-terminal domain
1 1 1 0 SCOP 69705 Transcription factor NusA, N-terminal domain
1 1 1 0 SCOP 53150 DNA repair protein MutS, domain II
1 1 1 1 SCOP 81767 Pre-protein crosslinking domain of SecA
1 1 1 1 SCOP 81799 Putative methyltransferase TM0872, insert domain
1 1 1 0 SCOP 82829 MesJ substrate recognition domain-like
1 1 1 0 SCOP 46915 Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3
1 1 1 0 SCOP 109736 FGAM synthase PurL, linker domain
1 1 1 0 SCOP 160996 HI0933 insert domain-like
1 1 1 0 SCOP 57770 Methionyl-tRNA synthetase (MetRS), Zn-domain

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The following superfamilies have one or more weak hits:

SCOP superfamily Myosin rod fragments
SCOP superfamily Nop domain
SCOP superfamily 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
SCOP superfamily Cytochrome c oxidase subunit III-like
SCOP superfamily Aquaporin-like
SCOP superfamily Voltage-gated potassium channels
SCOP superfamily Family A G protein-coupled receptor-like
SCOP superfamily Chemotaxis phosphatase CheZ
SCOP superfamily Ribosome binding protein Y (YfiA homologue)
SCOP superfamily Ran-GTPase activating protein 1 (RanGAP1), C-terminal domain
SCOP superfamily Intermediate filament protein, coiled coil region
SCOP superfamily Flagellar transcriptional activator FlhD
SCOP superfamily Metallothionein
SCOP superfamily Serpins
SCOP superfamily Aromatic aminoacid monoxygenases, catalytic and oligomerization domains
SCOP superfamily Aldehyde ferredoxin oxidoreductase, N-terminal domain
SCOP superfamily RNA-binding domain, RBD
SCOP superfamily His-Me finger endonucleases
SCOP superfamily AFP III-like domain
SCOP superfamily Peptidase/esterase 'gauge' domain
SCOP superfamily Starch-binding domain-like
SCOP superfamily Multiheme cytochromes
SCOP superfamily Sec7 domain
SCOP superfamily Seven-hairpin glycosidases
SCOP superfamily DBL homology domain (DH-domain)
SCOP superfamily lambda integrase-like, N-terminal domain
SCOP superfamily Ribbon-helix-helix
SCOP superfamily Apolipoprotein
SCOP superfamily Gam-like
SCOP superfamily CHY zinc finger-like
SCOP superfamily AF1531-like
SCOP superfamily Taf5 N-terminal domain-like
SCOP superfamily BT0923-like
SCOP superfamily V-type ATPase subunit E-like
SCOP superfamily Sec63 N-terminal domain-like
SCOP superfamily YheA/YmcA-like
SCOP superfamily AF1862-like
SCOP superfamily DnaD domain-like
SCOP superfamily occludin/ELL-like
SCOP superfamily Sec2 N-terminal region
SCOP superfamily ImmE5-like
SCOP superfamily RelE-like
SCOP superfamily EndoU-like
SCOP superfamily PA2201 C-terminal domain-like
SCOP superfamily ChaB-like
SCOP superfamily ISY1 domain-like
SCOP superfamily YehU-like
SCOP superfamily DNA primase DnaG, C-terminal domain
SCOP superfamily Bacillus phage protein
SCOP superfamily Surp module (SWAP domain)
SCOP superfamily BAR/IMD domain-like
SCOP superfamily G protein-binding domain
SCOP superfamily DNA-binding pseudobarrel domain
SCOP superfamily Hypothetical protein ST1625
SCOP superfamily Methenyltetrahydrofolate cyclohydrolase-like

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