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Aquifex aeolicus VF5 superfamily assignments

Taxonomy
Taxonomy browser entry

Bacteria; Aquificae; Aquificae; Aquificales; Aquificaceae; Aquifex; Aquifex aeolicus; Aquifex aeolicus VF5

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Fasta format sequences
Domain assignments


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Assignment statistics

Sequences: 1526 total
1169 (77 %) with assignment
315 average length
71 % amino acid coverage
Domains: 1730 total
577 unique superfamilies
399 unique families
290 average length
3 average superfamily size
67 % formed by duplication
Domain combinations: 318 domain pairs
717 unique architectures

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Superfamily assignments

Domains

Proteins

Architectures

Families

SCOP link

Superfamilies

127 114 52 8 SCOP 52540 P-loop containing nucleoside triphosphate hydrolases
44 44 22 6 SCOP 51735 NAD(P)-binding Rossmann-fold domains
34 23 17 4 SCOP 50249 Nucleic acid-binding proteins
29 29 7 8 SCOP 53335 S-adenosyl-L-methionine-dependent methyltransferases
22 18 10 2 SCOP 51905 FAD/NAD(P)-binding domain
22 21 7 1 SCOP 52833 Thioredoxin-like
21 17 11 0 SCOP 48452 TPR-like
21 21 3 3 SCOP 102114 Radical SAM enzymes
18 11 5 3 SCOP 53067 Actin-like ATPase domain
18 17 4 2 SCOP 53756 UDP-Glycosyltransferase/glycogen phosphorylase
17 17 11 5 SCOP 52374 Nucleotidylyl transferase
17 14 12 6 SCOP 54211 Ribosomal protein S5 domain 2-like
16 16 2 4 SCOP 53383 PLP-dependent transferases
16 16 12 2 SCOP 55681 Class II aaRS and biotin synthetases
15 13 8 3 SCOP 52402 Adenine nucleotide alpha hydrolases-like
14 14 9 0 SCOP 46785 "Winged helix" DNA-binding domain
12 12 3 5 SCOP 51569 Aldolase
12 12 7 3 SCOP 53448 Nucleotide-diphospho-sugar transferases
12 12 7 1 SCOP 53850 Periplasmic binding protein-like II
11 11 8 2 SCOP 56059 Glutathione synthetase ATP-binding domain-like
11 11 5 0 SCOP 46689 Homeodomain-like
11 10 9 2 SCOP 50447 Translation proteins
11 11 7 1 SCOP 55073 Nucleotide cyclase
11 7 7 0 SCOP 55785 PYP-like sensor domain (PAS domain)
10 7 5 4 SCOP 52518 Thiamin diphosphate-binding fold (THDP-binding)
10 10 2 0 SCOP 56935 Porins
10 6 3 1 SCOP 82866 Multidrug efflux transporter AcrB transmembrane domain
10 4 2 0 SCOP 82693 Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
9 7 5 1 SCOP 46626 Cytochrome c
9 7 7 0 SCOP 55021 ACT-like
8 8 4 2 SCOP 52317 Class I glutamine amidotransferase-like
8 8 4 2 SCOP 53098 Ribonuclease H-like
8 8 3 1 SCOP 54862 4Fe-4S ferredoxins
8 8 4 3 SCOP 52096 ClpP/crotonase
8 8 7 0 SCOP 141868 EAL domain-like
8 8 4 1 SCOP 51230 Single hybrid motif
8 8 4 0 SCOP 46548 alpha-helical ferredoxin
8 8 2 3 SCOP 48179 6-phosphogluconate dehydrogenase C-terminal domain-like
8 8 5 1 SCOP 52440 PreATP-grasp domain
8 8 4 3 SCOP 55347 Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
8 4 2 0 SCOP 82714 Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
7 7 1 4 SCOP 51366 Ribulose-phoshate binding barrel
7 7 3 2 SCOP 56300 Metallo-dependent phosphatases
7 7 2 0 SCOP 75169 DsrEFH-like
7 7 6 1 SCOP 109604 HD-domain/PDEase-like
7 7 1 0 SCOP 56954 Outer membrane efflux proteins (OEP)
7 6 2 2 SCOP 54913 GlnB-like
7 7 3 0 SCOP 111369 HlyD-like secretion proteins
7 3 3 1 SCOP 88659 Sigma3 and sigma4 domains of RNA polymerase sigma factors
6 6 3 2 SCOP 53271 PRTase-like
6 6 4 1 SCOP 56784 HAD-like
6 6 4 3 SCOP 55120 Pseudouridine synthase
6 6 4 1 SCOP 55174 Alpha-L RNA-binding motif
6 4 3 0 SCOP 52821 Rhodanese/Cell cycle control phosphatase
6 6 1 0 SCOP 56281 Metallo-hydrolase/oxidoreductase
6 6 4 1 SCOP 55781 GAF domain-like
6 6 5 1 SCOP 54631 CBS-domain pair
6 6 6 1 SCOP 55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
6 6 5 2 SCOP 81301 Nucleotidyltransferase
6 6 5 1 SCOP 88697 PUA domain-like
6 4 4 0 SCOP 50156 PDZ domain-like
6 6 4 1 SCOP 47323 Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
6 5 2 1 SCOP 56042 PurM C-terminal domain-like
6 5 2 1 SCOP 55326 PurM N-terminal domain-like
5 5 2 0 SCOP 161098 MetI-like
5 5 4 2 SCOP 50104 Translation proteins SH3-like domain
5 5 4 2 SCOP 75217 alpha/beta knot
5 5 1 1 SCOP 53686 Tryptophan synthase beta subunit-like PLP-dependent enzymes
5 5 3 1 SCOP 52172 CheY-like
5 5 1 0 SCOP 54523 Pili subunits
5 5 3 2 SCOP 56762 HydB/Nqo4-like
5 5 3 2 SCOP 52467 DHS-like NAD/FAD-binding domain
5 4 4 1 SCOP 54814 Prokaryotic type KH domain (KH-domain type II)
5 5 3 1 SCOP 53244 MurD-like peptide ligases, peptide-binding domain
5 5 3 1 SCOP 53706 Formate dehydrogenase/DMSO reductase, domains 1-3
5 5 2 1 SCOP 51246 Rudiment single hybrid motif
5 5 3 0 SCOP 56176 FAD-binding/transporter-associated domain-like
5 5 3 2 SCOP 53623 MurD-like peptide ligases, catalytic domain
5 3 3 0 SCOP 53738 Phosphoglucomutase, first 3 domains
4 4 3 2 SCOP 51556 Metallo-dependent hydrolases
4 4 1 0 SCOP 53474 alpha/beta-Hydrolases
4 4 2 2 SCOP 53697 SIS domain
4 4 3 0 SCOP 57716 Glucocorticoid receptor-like (DNA-binding domain)
4 2 2 0 SCOP 47240 Ferritin-like
4 4 2 0 SCOP 103473 MFS general substrate transporter
4 4 1 3 SCOP 53659 Isocitrate/Isopropylmalate dehydrogenase-like
4 4 3 0 SCOP 109998 Triger factor/SurA peptide-binding domain-like
4 4 3 2 SCOP 53633 Carbamate kinase-like
4 4 3 3 SCOP 51161 Trimeric LpxA-like enzymes
4 4 3 0 SCOP 51261 Duplicated hybrid motif
4 4 1 0 SCOP 48150 DNA-glycosylase
4 4 3 2 SCOP 56770 HydA/Nqo6-like
4 4 3 0 SCOP 54292 2Fe-2S ferredoxin-like
4 4 1 0 SCOP 54285 MoaD/ThiS
4 4 3 1 SCOP 51419 PLP-binding barrel
4 4 3 1 SCOP 53187 Zn-dependent exopeptidases
4 4 4 2 SCOP 56235 N-terminal nucleophile aminohydrolases (Ntn hydrolases)
4 4 3 0 SCOP 50182 Sm-like ribonucleoproteins
4 4 1 2 SCOP 55729 Acyl-CoA N-acyltransferases (Nat)
4 4 2 1 SCOP 88723 PIN domain-like
4 4 4 1 SCOP 53328 Formyltransferase
4 4 2 1 SCOP 51182 RmlC-like cupins
4 4 1 1 SCOP 55620 Tetrahydrobiopterin biosynthesis enzymes-like
4 2 2 0 SCOP 49503 Cupredoxins
4 4 4 1 SCOP 89550 PHP domain-like
4 4 2 2 SCOP 50692 ADC-like
4 4 4 1 SCOP 53955 Lysozyme-like
4 2 1 0 SCOP 63411 LuxS/MPP-like metallohydrolase
4 4 4 1 SCOP 47781 RuvA domain 2-like
4 2 2 1 SCOP 54980 EF-G C-terminal domain-like
4 4 4 0 SCOP 47384 Homodimeric domain of signal transducing histidine kinase
4 4 3 1 SCOP 52922 TK C-terminal domain-like
4 4 4 1 SCOP 52210 Succinyl-CoA synthetase domains
4 4 4 0 SCOP 116726 TrkA C-terminal domain-like
4 3 3 0 SCOP 63380 Riboflavin synthase domain-like
4 4 4 0 SCOP 110997 Sporulation related repeat
4 2 2 0 SCOP 49493 HSP40/DnaJ peptide-binding domain
3 3 3 2 SCOP 53927 Cytidine deaminase-like
3 3 2 2 SCOP 53613 Ribokinase-like
3 3 1 1 SCOP 56112 Protein kinase-like (PK-like)
3 3 3 1 SCOP 64182 DHH phosphoesterases
3 3 1 0 SCOP 52980 Restriction endonuclease-like
3 3 3 1 SCOP 55821 YrdC/RibB
3 3 1 2 SCOP 53720 ALDH-like
3 3 2 1 SCOP 54637 Thioesterase/thiol ester dehydrase-isomerase
3 3 1 0 SCOP 53254 Phosphoglycerate mutase-like
3 3 2 2 SCOP 55205 EPT/RTPC-like
3 3 2 1 SCOP 117143 Flagellar hook protein flgE
3 3 1 0 SCOP 64518 Phase 1 flagellin
3 3 2 1 SCOP 51395 FMN-linked oxidoreductases
3 3 2 0 SCOP 64307 SirA-like
3 3 2 1 SCOP 50475 FMN-binding split barrel
3 2 2 2 SCOP 51726 UROD/MetE-like
3 3 2 1 SCOP 51445 (Trans)glycosidases
3 3 3 0 SCOP 56317 Carbon-nitrogen hydrolase
3 3 2 1 SCOP 52283 Formate/glycerate dehydrogenase catalytic domain-like
3 3 2 2 SCOP 81342 Transmembrane di-heme cytochromes
3 3 3 0 SCOP 52954 Class II aaRS ABD-related
3 3 3 1 SCOP 102405 MCP/YpsA-like
3 3 2 0 SCOP 56601 beta-lactamase/transpeptidase-like
3 3 3 1 SCOP 52016 LeuD/IlvD-like
3 3 3 1 SCOP 88946 Sigma2 domain of RNA polymerase sigma factors
3 3 1 0 SCOP 103088 OmpA-like
3 2 2 0 SCOP 103481 Multidrug resistance efflux transporter EmrE
3 2 2 0 SCOP 101386 all-alpha NTP pyrophosphatases
3 2 2 2 SCOP 53901 Thiolase-like
3 3 2 0 SCOP 103247 TT1751-like
3 3 3 0 SCOP 48695 Multiheme cytochromes
3 3 2 0 SCOP 141371 PilZ domain-like
3 3 3 2 SCOP 56091 DNA ligase/mRNA capping enzyme, catalytic domain
3 3 2 0 SCOP 46589 tRNA-binding arm
3 1 1 0 SCOP 55979 DNA clamp
3 3 2 1 SCOP 56712 Prokaryotic type I DNA topoisomerase
3 2 2 1 SCOP 56014 Nitrite and sulphite reductase 4Fe-4S domain-like
3 1 1 1 SCOP 55973 S-adenosylmethionine synthetase
3 3 3 0 SCOP 81665 Calcium ATPase, transmembrane domain M
3 3 2 1 SCOP 50621 Alanine racemase C-terminal domain-like
3 3 3 1 SCOP 50677 ValRS/IleRS/LeuRS editing domain
3 3 3 0 SCOP 81653 Calcium ATPase, transduction domain A
3 2 2 1 SCOP 55666 Ribonuclease PH domain 2-like
2 2 1 0 SCOP 57829 Zn-binding ribosomal proteins
2 2 1 1 SCOP 53790 Tetrapyrrole methylase
2 2 1 1 SCOP 47973 Ribosomal protein S7
2 2 1 1 SCOP 81606 PP2C-like
2 2 1 1 SCOP 54197 HIT-like
2 2 1 1 SCOP 53137 Translational machinery components
2 2 2 1 SCOP 55920 Creatinase/aminopeptidase
2 2 2 0 SCOP 69593 Glycerol-3-phosphate (1)-acyltransferase
2 2 2 1 SCOP 53597 Dihydrofolate reductase-like
2 2 2 2 SCOP 100950 NagB/RpiA/CoA transferase-like
2 2 1 0 SCOP 143800 L28p-like
2 2 1 1 SCOP 75620 Release factor
2 2 2 0 SCOP 47336 ACP-like
2 2 2 1 SCOP 82649 SufE/NifU
2 2 1 0 SCOP 47729 IHF-like DNA-binding proteins
2 2 1 1 SCOP 55486 Metalloproteases ("zincins"), catalytic domain
2 2 2 1 SCOP 50129 GroES-like
2 2 2 1 SCOP 52943 ATP synthase (F1-ATPase), gamma subunit
2 2 1 0 SCOP 82784 OsmC-like
2 2 2 2 SCOP 64484 beta and beta-prime subunits of DNA dependent RNA-polymerase
2 2 1 1 SCOP 48557 L-aspartase-like
2 2 1 1 SCOP 111283 Putative modulator of DNA gyrase, PmbA/TldD
2 2 1 1 SCOP 51283 dUTPase-like
2 2 2 1 SCOP 51621 Phosphoenolpyruvate/pyruvate domain
2 2 1 0 SCOP 55811 Nudix
2 2 1 1 SCOP 56655 Carbohydrate phosphatase
2 2 1 0 SCOP 50685 Barwin-like endoglucanases
2 2 1 1 SCOP 48576 Terpenoid synthases
2 2 1 1 SCOP 47113 Histone-fold
2 2 2 0 SCOP 52949 Macro domain-like
2 2 2 0 SCOP 55315 L30e-like
2 1 1 0 SCOP 55469 FMN-dependent nitroreductase-like
2 2 2 0 SCOP 81296 E set domains
2 2 2 0 SCOP 54534 FKBP-like
2 2 1 0 SCOP 46579 Prefoldin
2 2 1 1 SCOP 56322 ADC synthase
2 1 1 0 SCOP 54506 Diaminopimelate epimerase-like
2 2 1 1 SCOP 56752 D-aminoacid aminotransferase-like PLP-dependent enzymes
2 2 1 0 SCOP 53639 AraD/HMP-PK domain-like
2 2 1 2 SCOP 52972 ITPase-like
2 2 1 0 SCOP 49329 Cu,Zn superoxide dismutase-like
2 2 2 0 SCOP 48208 Six-hairpin glycosidases
2 2 1 0 SCOP 110849 ParB/Sulfiredoxin
2 2 2 0 SCOP 55008 HMA, heavy metal-associated domain
2 2 2 1 SCOP 52151 FabD/lysophospholipase-like
2 2 1 1 SCOP 52768 Arginase/deacetylase
2 2 1 1 SCOP 52788 Phosphotyrosine protein phosphatases I
2 2 2 1 SCOP 81442 Cytochrome c oxidase subunit I-like
2 2 2 2 SCOP 55931 Glutamine synthetase/guanido kinase
2 2 1 1 SCOP 111038 YjbQ-like
2 2 1 0 SCOP 143243 Nqo5-like
2 2 2 0 SCOP 81324 Voltage-gated potassium channels
2 2 1 0 SCOP 55718 SCP-like
2 2 2 0 SCOP 46955 Putative DNA-binding domain
2 2 2 0 SCOP 47413 lambda repressor-like DNA-binding domains
2 2 1 1 SCOP 53807 "Helical backbone" metal receptor
2 2 1 0 SCOP 56349 DNA breaking-rejoining enzymes
2 2 1 0 SCOP 50022 ISP domain
2 2 2 1 SCOP 52507 Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
2 2 2 0 SCOP 51206 cAMP-binding domain-like
2 2 2 0 SCOP 161111 Cation efflux protein transmembrane domain-like
2 2 2 1 SCOP 53218 Molybdenum cofactor biosynthesis proteins
2 2 2 1 SCOP 53732 Aconitase iron-sulfur domain
2 2 2 0 SCOP 82689 Mechanosensitive channel protein MscS (YggB), C-terminal domain
2 2 1 1 SCOP 117396 TM1631-like
2 2 1 1 SCOP 51391 Thiamin phosphate synthase
2 2 1 0 SCOP 51338 Composite domain of metallo-dependent hydrolases
2 2 2 1 SCOP 52335 Methylglyoxal synthase-like
2 2 1 0 SCOP 53323 Pyruvate-ferredoxin oxidoreductase, PFOR, domain III
2 2 1 0 SCOP 101801 Surface presentation of antigens (SPOA)
2 2 2 0 SCOP 50486 FMT C-terminal domain-like
2 2 1 0 SCOP 103196 Roadblock/LC7 domain
2 2 2 1 SCOP 51604 Enolase C-terminal domain-like
2 2 1 0 SCOP 74653 TolA/TonB C-terminal domain
2 2 2 1 SCOP 46565 Chaperone J-domain
2 2 2 1 SCOP 55186 ThrRS/AlaRS common domain
2 2 1 1 SCOP 50465 EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
2 2 1 0 SCOP 48498 Tetracyclin repressor-like, C-terminal domain
2 2 2 0 SCOP 52343 Ferredoxin reductase-like, C-terminal NADP-linked domain
2 2 2 1 SCOP 52743 Subtilisin-like
2 1 1 0 SCOP 56003 Molybdenum cofactor-binding domain
2 2 1 0 SCOP 90123 ABC transporter transmembrane region
2 1 1 1 SCOP 48592 GroEL equatorial domain-like
2 2 1 1 SCOP 51690 Nicotinate/Quinolinate PRTase C-terminal domain-like
2 2 2 0 SCOP 57938 DnaJ/Hsp40 cysteine-rich domain
2 2 2 0 SCOP 81923 Double Clp-N motif
2 2 1 2 SCOP 53223 Aminoacid dehydrogenase-like, N-terminal domain
2 2 2 0 SCOP 48019 post-AAA+ oligomerization domain-like
2 2 2 1 SCOP 56719 Type II DNA topoisomerase
2 2 1 0 SCOP 109635 DnaK suppressor protein DksA, alpha-hairpin domain
2 2 2 0 SCOP 158472 HAMP domain-like
2 1 1 1 SCOP 53681 Aspartate/glutamate racemase
2 1 1 1 SCOP 48029 FliG
2 2 1 1 SCOP 52418 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
2 2 2 1 SCOP 48334 DNA repair protein MutS, domain III
2 2 1 1 SCOP 53671 Aspartate/ornithine carbamoyltransferase
2 2 2 0 SCOP 142984 Nqo1 middle domain-like
2 2 2 0 SCOP 54791 Eukaryotic type KH-domain (KH-domain type I)
2 2 1 0 SCOP 55060 GHMP Kinase, C-terminal domain
2 2 2 1 SCOP 81891 Poly A polymerase C-terminal region-like
2 2 1 1 SCOP 56425 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
2 2 2 0 SCOP 81660 Metal cation-transporting ATPase, ATP-binding domain N
2 2 1 1 SCOP 46977 Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
2 2 2 0 SCOP 46600 C-terminal UvrC-binding domain of UvrB
2 2 2 0 SCOP 160240 Cation efflux protein cytoplasmic domain-like
2 2 1 0 SCOP 47648 Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
2 2 1 1 SCOP 56327 LDH C-terminal domain-like
2 2 1 0 SCOP 63418 MurE/MurF N-terminal domain
2 2 1 0 SCOP 110921 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain
2 2 1 1 SCOP 51984 MurCD N-terminal domain
2 2 2 1 SCOP 54768 dsRNA-binding domain-like
2 2 2 0 SCOP 54373 FAD-linked reductases, C-terminal domain
2 1 1 1 SCOP 56053 Ribosomal protein L6
2 1 1 0 SCOP 55124 Nitrite/Sulfite reductase N-terminal domain-like
2 2 2 0 SCOP 55957 Phosphoglucomutase, C-terminal domain
2 2 1 0 SCOP 54675 Nicotinate/Quinolinate PRTase N-terminal domain-like
2 2 1 0 SCOP 50615 N-terminal domain of alpha and beta subunits of F1 ATP synthase
2 2 2 1 SCOP 81271 TGS-like
2 1 1 1 SCOP 54713 Elongation factor Ts (EF-Ts), dimerisation domain
2 2 1 1 SCOP 47917 C-terminal domain of alpha and beta subunits of F1 ATP synthase
2 2 1 0 SCOP 56194 Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain
2 2 1 1 SCOP 89000 post-HMGL domain-like
2 2 1 0 SCOP 56519 Penicillin binding protein dimerisation domain
1 1 1 1 SCOP 56731 DNA primase core
1 1 1 0 SCOP 48013 NusB-like
1 1 1 1 SCOP 53167 Purine and uridine phosphorylases
1 1 1 1 SCOP 74982 Small protein B (SmpB)
1 1 1 1 SCOP 56808 Ribosomal protein L1
1 1 1 1 SCOP 53178 Peptidyl-tRNA hydrolase-like
1 1 1 0 SCOP 46911 Ribosomal protein S18
1 1 1 1 SCOP 52141 Uracil-DNA glycosylase-like
1 1 1 1 SCOP 75304 Amidase signature (AS) enzymes
1 1 1 1 SCOP 143597 YojJ-like
1 1 1 1 SCOP 56420 Peptide deformylase
1 1 1 0 SCOP 142433 CinA-like
1 1 1 1 SCOP 111331 NAD kinase/diacylglycerol kinase-like
1 1 1 0 SCOP 89919 Ribosome-binding factor A, RbfA
1 1 1 1 SCOP 54999 Ribosomal protein S10
1 1 1 1 SCOP 52166 Ribosomal protein L4
1 1 1 0 SCOP 54189 Ribosomal proteins S24e, L23 and L15e
1 1 1 1 SCOP 54570 Ribosomal protein S19
1 1 1 0 SCOP 54843 Ribosomal protein L22
1 1 1 1 SCOP 54686 Ribosomal protein L16p/L10e
1 1 1 1 SCOP 50193 Ribosomal protein L14
1 1 1 1 SCOP 55282 RL5-like
1 1 1 1 SCOP 56047 Ribosomal protein S8
1 1 1 1 SCOP 52080 Ribosomal proteins L15p and L18e
1 1 1 0 SCOP 103491 Preprotein translocase SecY subunit
1 1 1 0 SCOP 57840 Ribosomal protein L36
1 1 1 1 SCOP 46946 S13-like H2TH domain
1 1 1 1 SCOP 64263 Prokaryotic ribosomal protein L17
1 1 1 0 SCOP 143034 L35p-like
1 1 1 1 SCOP 74731 Ribosomal protein L20
1 1 1 0 SCOP 56214 4'-phosphopantetheinyl transferase
1 1 1 1 SCOP 53784 Phosphofructokinase
1 1 1 1 SCOP 52218 Flavoproteins
1 1 1 1 SCOP 141091 L21p-like
1 1 1 0 SCOP 110324 Ribosomal L27 protein-like
1 1 1 1 SCOP 51658 Xylose isomerase-like
1 1 1 1 SCOP 53748 Phosphoglycerate kinase
1 1 1 1 SCOP 75625 YebC-like
1 1 1 1 SCOP 50324 Inorganic pyrophosphatase
1 1 1 1 SCOP 160369 Ribosomal protein L10-like
1 1 1 0 SCOP 46992 Ribosomal protein S20
1 1 1 1 SCOP 89623 Ribose/Galactose isomerase RpiB/AlsB
1 1 1 0 SCOP 81333 F1F0 ATP synthase subunit C
1 1 1 1 SCOP 109755 PhoU-like
1 1 1 1 SCOP 52161 Ribosomal protein L13
1 1 1 1 SCOP 47060 S15/NS1 RNA-binding domain
1 1 1 1 SCOP 51351 Triosephosphate isomerase (TIM)
1 1 1 1 SCOP 55194 Ribosome recycling factor, RRF
1 1 1 1 SCOP 54565 Ribosomal protein S16
1 1 1 1 SCOP 69765 IpsF-like
1 1 1 1 SCOP 51730 FAD-linked oxidoreductase
1 1 1 1 SCOP 103263 Chorismate synthase, AroC
1 1 1 1 SCOP 89360 HesB-like domain
1 1 1 1 SCOP 111337 QueA-like
1 1 1 1 SCOP 51713 tRNA-guanine transglycosylase
1 1 1 1 SCOP 51412 Inosine monophosphate dehydrogenase (IMPDH)
1 1 1 0 SCOP 56276 S-adenosylmethionine decarboxylase
1 1 1 1 SCOP 52313 Ribosomal protein S2
1 1 1 1 SCOP 64005 Undecaprenyl diphosphate synthase
1 1 1 1 SCOP 142695 RibA-like
1 1 1 0 SCOP 81345 ABC transporter involved in vitamin B12 uptake, BtuC
1 1 1 1 SCOP 55298 YjgF-like
1 1 1 1 SCOP 52121 Lumazine synthase
1 1 1 1 SCOP 81452 Cytochrome c oxidase subunit III-like
1 1 1 0 SCOP 55129 Ribosomal protein L30p/L7e
1 1 1 0 SCOP 46561 Ribosomal protein L29 (L29p)
1 1 1 1 SCOP 56796 Dehydroquinate synthase-like
1 1 1 1 SCOP 54995 Ribosomal protein S6
1 1 1 0 SCOP 49764 HSP20-like chaperones
1 1 1 1 SCOP 56104 SAICAR synthase-like
1 1 1 0 SCOP 89957 MTH1187/YkoF-like
1 1 1 0 SCOP 51430 NAD(P)-linked oxidoreductase
1 1 1 1 SCOP 56801 Acetyl-CoA synthetase-like
1 1 1 1 SCOP 56672 DNA/RNA polymerases
1 1 1 0 SCOP 48256 Citrate synthase
1 1 1 1 SCOP 69500 DTD-like
1 1 1 0 SCOP 48317 Acid phosphatase/Vanadium-dependent haloperoxidase
1 1 1 0 SCOP 53590 Nucleoside hydrolase
1 1 1 0 SCOP 53649 Alkaline phosphatase-like
1 1 1 0 SCOP 54427 NTF2-like
1 1 1 0 SCOP 54001 Cysteine proteinases
1 1 1 1 SCOP 52499 Isochorismatase-like hydrolases
1 1 1 0 SCOP 55144 LigT-like
1 1 1 0 SCOP 55248 PCD-like
1 1 1 1 SCOP 69572 Activating enzymes of the ubiquitin-like proteins
1 1 1 0 SCOP 51306 LexA/Signal peptidase
1 1 1 0 SCOP 51126 Pectin lyase-like
1 1 1 1 SCOP 54919 Nucleoside diphosphate kinase, NDK
1 1 1 0 SCOP 111126 Ligand-binding domain in the NO signalling and Golgi transport
1 1 1 0 SCOP 49777 PEBP-like
1 1 1 0 SCOP 88713 Glycoside hydrolase/deacetylase
1 1 1 0 SCOP 55257 RBP11-like subunits of RNA polymerase
1 1 1 1 SCOP 64153 YjeF N-terminal domain-like
1 1 1 0 SCOP 69618 HemD-like
1 1 1 1 SCOP 143447 AMMECR1-like
1 1 1 0 SCOP 63562 RPB6/omega subunit-like
1 1 1 1 SCOP 53800 Chelatase
1 1 1 1 SCOP 141734 HisI-like
1 1 1 0 SCOP 81648 a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
1 1 1 0 SCOP 46458 Globin-like
1 1 1 0 SCOP 144091 Rhomboid-like
1 1 1 1 SCOP 101478 ADP-ribosylglycohydrolase
1 1 1 1 SCOP 55040 Molybdenum cofactor biosynthesis protein C, MoaC
1 1 1 0 SCOP 144020 FdhE-like
1 1 1 0 SCOP 52091 SpoIIaa-like
1 1 1 1 SCOP 51717 Dihydropteroate synthetase-like
1 1 1 1 SCOP 51998 PFL-like glycyl radical enzymes
1 1 1 0 SCOP 102712 JAB1/MPN domain
1 1 1 1 SCOP 54909 Dimeric alpha+beta barrel
1 1 1 0 SCOP 64438 CNF1/YfiH-like putative cysteine hydrolases
1 1 1 1 SCOP 50494 Trypsin-like serine proteases
1 1 1 1 SCOP 52255 N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)
1 1 1 1 SCOP 111352 Ammonium transporter
1 1 1 1 SCOP 142754 NadA-like
1 1 1 1 SCOP 56266 DmpA/ArgJ-like
1 1 1 0 SCOP 57783 Zinc beta-ribbon
1 1 1 0 SCOP 82771 GIY-YIG endonuclease
1 1 1 0 SCOP 82697 PurS-like
1 1 1 0 SCOP 117916 Fe-S cluster assembly (FSCA) domain-like
1 1 1 0 SCOP 56524 Oxidoreductase molybdopterin-binding domain
1 1 1 0 SCOP 160246 EspE N-terminal domain-like
1 1 1 1 SCOP 55083 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK
1 1 1 1 SCOP 103256 Hypothetical protein TM0160
1 1 1 0 SCOP 46767 Methylated DNA-protein cysteine methyltransferase, C-terminal domain
1 1 1 0 SCOP 53300 vWA-like
1 1 1 1 SCOP 64167 SurE-like
1 1 1 1 SCOP 63892 Pyridoxine 5'-phosphate synthase
1 1 1 0 SCOP 54690 Molybdopterin synthase subunit MoaE
1 1 1 0 SCOP 141000 Glu-tRNAGln amidotransferase C subunit
1 1 1 1 SCOP 110399 ThiG-like
1 1 1 0 SCOP 46894 C-terminal effector domain of the bipartite response regulators
1 1 1 0 SCOP 159501 EreA/ChaN-like
1 1 1 1 SCOP 54736 ClpS-like
1 1 1 1 SCOP 111304 Recombination protein RecR
1 1 1 0 SCOP 140663 TTHA0068-like
1 1 1 1 SCOP 69796 Thymidylate synthase-complementing protein Thy1
1 1 1 1 SCOP 103365 Hypothetical protein PH1602
1 1 1 1 SCOP 69065 RNase III domain-like
1 1 1 0 SCOP 55200 Translation initiation factor IF3, C-terminal domain
1 1 1 0 SCOP 54975 Acylphosphatase/BLUF domain-like
1 1 1 0 SCOP 103084 Holliday junction resolvase RusA
1 1 1 0 SCOP 53213 LigB-like
1 1 1 0 SCOP 50969 YVTN repeat-like/Quinoprotein amine dehydrogenase
1 1 1 0 SCOP 89095 GatB/YqeY motif
1 1 1 0 SCOP 48600 Chorismate mutase II
1 1 1 0 SCOP 89392 Prokaryotic lipoproteins and lipoprotein localization factors
1 1 1 0 SCOP 101307 YutG-like
1 1 1 0 SCOP 110087 DR1885-like metal-binding protein
1 1 1 0 SCOP 55826 YbaK/ProRS associated domain
1 1 1 1 SCOP 118215 Proton glutamate symport protein
1 1 1 0 SCOP 159594 XCC0632-like
1 1 1 1 SCOP 48295 TrpR-like
1 1 1 0 SCOP 140931 Fic-like
1 1 1 0 SCOP 143631 ApbE-like
1 1 1 1 SCOP 117457 FumA C-terminal domain-like
1 1 1 0 SCOP 111384 OmpH-like
1 1 1 1 SCOP 161070 SNF-like
1 1 1 1 SCOP 101116 Flagellar export chaperone FliS
1 1 1 1 SCOP 142338 CofD-like
1 1 1 1 SCOP 53163 HybD-like
1 1 1 0 SCOP 56024 Phospholipase D/nuclease
1 1 1 0 SCOP 69754 Ribosome binding protein Y (YfiA homologue)
1 1 1 0 SCOP 103501 Respiratory nitrate reductase 1 gamma chain
1 1 1 1 SCOP 101498 Anti-sigma factor FlgM
1 1 1 0 SCOP 75005 Arabinanase/levansucrase/invertase
1 1 1 0 SCOP 47175 Cytochromes
1 1 1 0 SCOP 158791 MgtE N-terminal domain-like
1 1 1 0 SCOP 50346 PRC-barrel domain
1 1 1 1 SCOP 111321 AF1104-like
1 1 1 1 SCOP 111249 Sulfolobus fructose-1,6-bisphosphatase-like
1 1 1 0 SCOP 160980 SSO1389-like
1 1 1 0 SCOP 69819 MTH1598-like
1 1 1 1 SCOP 52490 Tubulin nucleotide-binding domain-like
1 1 1 1 SCOP 110455 Toprim domain
1 1 1 0 SCOP 63867 MoeA C-terminal domain-like
1 1 1 0 SCOP 56563 Major capsid protein gp5
1 1 1 0 SCOP 141523 L,D-transpeptidase catalytic domain-like
1 1 1 0 SCOP 53092 Creatinase/prolidase N-terminal domain
1 1 1 0 SCOP 50199 Staphylococcal nuclease
1 1 1 1 SCOP 69864 Argininosuccinate synthetase, C-terminal domain
1 1 1 0 SCOP 55424 FAD/NAD-linked reductases, dimerisation (C-terminal) domain
1 1 1 0 SCOP 48024 N-terminal domain of DnaB helicase
1 1 1 0 SCOP 143865 CorA soluble domain-like
1 1 1 1 SCOP 69336 Alpha subunit of glutamate synthase, C-terminal domain
1 1 1 0 SCOP 55103 FAD-linked oxidases, C-terminal domain
1 1 1 0 SCOP 160214 FlaG-like
1 1 1 0 SCOP 82114 Riboflavin kinase-like
1 1 1 1 SCOP 46906 Ribosomal protein L11, C-terminal domain
1 1 1 0 SCOP 160443 SMR domain-like
1 1 1 1 SCOP 102645 CoaB-like
1 1 1 0 SCOP 118352 HSP33 redox switch-like
1 1 1 0 SCOP 54106 LysM domain
1 1 1 0 SCOP 160544 EscU C-terminal domain-like
1 1 1 0 SCOP 158568 AF1862-like
1 1 1 0 SCOP 103190 Sensory domain-like
1 1 1 0 SCOP 47188 Hemerythrin-like
1 1 1 1 SCOP 54821 Ribosomal protein S3 C-terminal domain
1 1 1 0 SCOP 55234 Cyanase C-terminal domain
1 1 1 0 SCOP 81573 F1F0 ATP synthase subunit B, membrane domain
1 1 1 0 SCOP 63848 Cell-division inhibitor MinC, C-terminal domain
1 1 1 0 SCOP 160387 NosL/MerB-like
1 1 1 0 SCOP 52009 Phosphohistidine domain
1 1 1 0 SCOP 118116 DNA mismatch repair protein MutL
1 1 1 0 SCOP 81336 F1F0 ATP synthase subunit A
1 1 1 0 SCOP 58064 Influenza hemagglutinin (stalk)
1 1 1 0 SCOP 47789 C-terminal domain of RNA polymerase alpha subunit
1 1 1 0 SCOP 51344 Epsilon subunit of F1F0-ATP synthase N-terminal domain
1 1 1 0 SCOP 51971 Nucleotide-binding domain
1 1 1 0 SCOP 55658 L9 N-domain-like
1 1 1 0 SCOP 55816 5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain
1 1 1 1 SCOP 82679 N-utilization substance G protein NusG, N-terminal domain
1 1 1 0 SCOP 55190 Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain
1 1 1 0 SCOP 69055 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain
1 1 1 1 SCOP 56037 PheT/TilS domain
1 1 1 0 SCOP 58014 Coiled-coil domain of nucleotide exchange factor GrpE
1 1 1 1 SCOP 51011 Glycosyl hydrolase domain
1 1 1 0 SCOP 81464 Cytochrome c oxidase subunit II-like, transmembrane region
1 1 1 0 SCOP 55307 Tubulin C-terminal domain-like
1 1 1 1 SCOP 140990 FtsH protease domain-like
1 1 1 0 SCOP 51294 Hedgehog/intein (Hint) domain
1 1 1 1 SCOP 54719 Fe,Mn superoxide dismutase (SOD), C-terminal domain
1 1 1 0 SCOP 48163 An anticodon-binding domain of class I aminoacyl-tRNA synthetases
1 1 1 1 SCOP 143968 UbiD C-terminal domain-like
1 1 1 1 SCOP 52021 Carbamoyl phosphate synthetase, small subunit N-terminal domain
1 1 1 0 SCOP 51120 beta-Roll
1 1 1 1 SCOP 54826 Enolase N-terminal domain-like
1 1 1 1 SCOP 52029 GroEL apical domain-like
1 1 1 0 SCOP 68912 Rho N-terminal domain-like
1 1 1 1 SCOP 54810 GMP synthetase C-terminal dimerisation domain
1 1 1 0 SCOP 101904 GyrA/ParC C-terminal domain-like
1 1 1 1 SCOP 82004 N-utilization substance G protein NusG, insert domain
1 1 1 0 SCOP 143548 Serine metabolism enzymes domain
1 1 1 0 SCOP 47364 Domain of the SRP/SRP receptor G-proteins
1 1 1 0 SCOP 48300 Ribosomal protein L7/12, oligomerisation (N-terminal) domain
1 1 1 1 SCOP 100920 Heat shock protein 70kD (HSP70), peptide-binding domain
1 1 1 0 SCOP 141322 NfeD domain-like
1 1 1 0 SCOP 90002 Hypothetical protein YjiA, C-terminal domain
1 1 1 0 SCOP 144083 Magnesium transport protein CorA, transmembrane region
1 1 1 0 SCOP 46934 UBA-like
1 1 1 0 SCOP 54423 DsbC/DsbG N-terminal domain-like
1 1 1 1 SCOP 63882 MoeA N-terminal region -like
1 1 1 0 SCOP 52113 BRCT domain
1 1 1 0 SCOP 82861 Mechanosensitive channel protein MscS (YggB), transmembrane region
1 1 1 0 SCOP 74942 YhbC-like, C-terminal domain
1 1 1 0 SCOP 48435 Bacterial muramidases
1 1 1 0 SCOP 52413 UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
1 1 1 0 SCOP 117892 Band 7/SPFH domain
1 1 1 0 SCOP 75420 YhbC-like, N-terminal domain
1 1 1 0 SCOP 54752 RecA protein, C-terminal domain
1 1 1 0 SCOP 100934 Heat shock protein 70kD (HSP70), C-terminal subdomain
1 1 1 0 SCOP 54782 Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain
1 1 1 0 SCOP 101852 Bacterial fluorinating enzyme, C-terminal domain
1 1 1 0 SCOP 140490 Nqo1C-terminal domain-like
1 1 1 0 SCOP 102735 Trigger factor ribosome-binding domain
1 1 1 0 SCOP 55031 Bacterial exopeptidase dimerisation domain
1 1 1 1 SCOP 143975 IlvD/EDD N-terminal domain-like
1 1 1 0 SCOP 47807 5' to 3' exonuclease, C-terminal subdomain
1 1 1 1 SCOP 47446 Signal peptide-binding domain
1 1 1 1 SCOP 64397 Hsp33 domain
1 1 1 0 SCOP 54991 Anticodon-binding domain of PheRS
1 1 1 1 SCOP 55271 DNA repair protein MutS, domain I
1 1 1 0 SCOP 102522 Bacterial fluorinating enzyme, N-terminal domain
1 1 1 0 SCOP 55048 Probable ACP-binding domain of malonyl-CoA ACP transacylase
1 1 1 0 SCOP 47928 N-terminal domain of the delta subunit of the F1F0-ATP synthase
1 1 1 1 SCOP 48108 Carbamoyl phosphate synthetase, large subunit connection domain
1 1 1 1 SCOP 101690 PAZ domain
1 1 1 1 SCOP 82051 Obg GTP-binding protein N-terminal domain
1 1 1 1 SCOP 142019 Nqo1 FMN-binding domain-like
1 1 1 1 SCOP 54368 Glutamine synthetase, N-terminal domain
1 1 1 0 SCOP 55261 GAD domain-like
1 1 1 0 SCOP 57774 Microbial and mitochondrial ADK, insert "zinc finger" domain
1 1 1 1 SCOP 54747 Ribosomal L11/L12e N-terminal domain
1 1 1 1 SCOP 46609 Fe,Mn superoxide dismutase (SOD), N-terminal domain
1 1 1 0 SCOP 117018 ATP-dependent DNA ligase DNA-binding domain
1 1 1 0 SCOP 69742 Glutamyl tRNA-reductase catalytic, N-terminal domain
1 1 1 0 SCOP 75553 Smc hinge domain
1 1 1 0 SCOP 75615 Siroheme synthase middle domains-like
1 1 1 1 SCOP 48168 R1 subunit of ribonucleotide reductase, N-terminal domain
1 1 1 1 SCOP 81886 Helical scaffold and wing domains of SecA
1 1 1 0 SCOP 52156 Initiation factor IF2/eIF5b, domain 3
1 1 1 0 SCOP 51064 Head domain of nucleotide exchange factor GrpE
1 1 1 0 SCOP 55653 Ribosomal protein L9 C-domain
1 1 1 1 SCOP 101353 Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
1 1 1 1 SCOP 56553 Insert subdomain of RNA polymerase alpha subunit
1 1 1 1 SCOP 54364 Translation initiation factor IF3, N-terminal domain
1 1 1 0 SCOP 69705 Transcription factor NusA, N-terminal domain
1 1 1 0 SCOP 53150 DNA repair protein MutS, domain II
1 1 1 1 SCOP 81767 Pre-protein crosslinking domain of SecA
1 1 1 0 SCOP 47802 DNA polymerase beta, N-terminal domain-like
1 1 1 1 SCOP 81799 Putative methyltransferase TM0872, insert domain
1 1 1 1 SCOP 82829 MesJ substrate recognition domain-like
1 1 1 0 SCOP 82653 Probable GTPase Der, C-terminal domain
1 1 1 0 SCOP 46915 Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3
1 1 1 0 SCOP 52913 RNA 3'-terminal phosphate cyclase, RPTC, insert domain

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The following superfamilies have one or more weak hits:

SCOP superfamily Ran binding protein zinc finger-like
SCOP superfamily Families 57/38 glycoside transferase middle domain
SCOP superfamily HCP-like
SCOP superfamily FF domain
SCOP superfamily Nucleotidyltransferase substrate binding subunit/domain
SCOP superfamily Rad50 coiled-coil Zn hook
SCOP superfamily Mitotic arrest deficient-like 1, Mad1
SCOP superfamily V-region of surface antigen I/II (SA I/II, PAC)
SCOP superfamily Cullin repeat-like
SCOP superfamily Type III secretory system chaperone-like
SCOP superfamily Glutamyl tRNA-reductase dimerization domain
SCOP superfamily Hypothetical protein MTH865
SCOP superfamily Intermediate filament protein, coiled coil region
SCOP superfamily Chorismate lyase-like
SCOP superfamily PTS-regulatory domain, PRD
SCOP superfamily Apolipoprotein A-I
SCOP superfamily Methyl-accepting chemotaxis protein (MCP) signaling domain
SCOP superfamily Bacterial hemolysins
SCOP superfamily Clostridium neurotoxins, "coiled-coil" domain
SCOP superfamily Tropomyosin
SCOP superfamily ArfGap/RecO-like zinc finger
SCOP superfamily Rubredoxin-like
SCOP superfamily Aerolisin/ETX pore-forming domain
SCOP superfamily Replication terminator protein (Tus)
SCOP superfamily Hect, E3 ligase catalytic domain
SCOP superfamily Monooxygenase (hydroxylase) regulatory protein
SCOP superfamily Homing endonucleases
SCOP superfamily CheY-binding domain of CheA
SCOP superfamily DNA damage-inducible protein DinI
SCOP superfamily CO dehydrogenase molybdoprotein N-domain-like
SCOP superfamily DLC
SCOP superfamily Nitrogenase accessory factor-like
SCOP superfamily Eukaryotic RPB5 N-terminal domain
SCOP superfamily TolB, N-terminal domain
SCOP superfamily PA domain
SCOP superfamily AFP III-like domain
SCOP superfamily Quinoprotein alcohol dehydrogenase-like
SCOP superfamily C-terminal domain of transcriptional repressors
SCOP superfamily EV matrix protein
SCOP superfamily Concanavalin A-like lectins/glucanases
SCOP superfamily Protein prenylyltransferase
SCOP superfamily ARM repeat
SCOP superfamily Cytochrome P450
SCOP superfamily Cyclin-like
SCOP superfamily t-snare proteins
SCOP superfamily EF-hand
SCOP superfamily Spectrin repeat
SCOP superfamily YfgJ-like
SCOP superfamily ATP synthase D chain-like
SCOP superfamily ATP synthase B chain-like
SCOP superfamily AF1531-like
SCOP superfamily SMI1/KNR4-like
SCOP superfamily YdfO-like
SCOP superfamily YopX-like
SCOP superfamily PSPTO4464-like
SCOP superfamily PRP4-like
SCOP superfamily ORC1-binding domain
SCOP superfamily STIV B116-like
SCOP superfamily CcmK-like
SCOP superfamily YefM-like
SCOP superfamily RelE-like
SCOP superfamily TM0957-like
SCOP superfamily Hyaluronidase post-catalytic domain-like
SCOP superfamily CRISPR-associated protein
SCOP superfamily Rps17e-like
SCOP superfamily DEK C-terminal domain
SCOP superfamily BAR/IMD domain-like
SCOP superfamily G protein-binding domain
SCOP superfamily Sec-C motif
SCOP superfamily Autotransporter
SCOP superfamily CheC-like
SCOP superfamily Obg GTP-binding protein C-terminal domain
SCOP superfamily Stathmin
SCOP superfamily Formin homology 2 domain (FH2 domain)
SCOP superfamily YcfC-like
SCOP superfamily Phosphoprotein XD domain

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