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Leuconostoc gasicomitatum LMG 18811 superfamily assignments

Taxonomy
Taxonomy browser entry

Bacteria; Terrabacteria group; Firmicutes; Bacilli; Lactobacillales; Leuconostocaceae; Leuconostoc; Leuconostoc gelidum; Leuconostoc gelidum subsp. gasicomitatum; Leuconostoc gelidum subsp. gasicomitatum LMG 18811

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Fasta format sequences
Domain assignments


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Assignment statistics

Sequences: 1912 total
1327 (69 %) with assignment
296 average length
67 % amino acid coverage
Domains: 1912 total
532 unique superfamilies
362 unique families
287 average length
3.6 average superfamily size
72 % formed by duplication
Domain combinations: 315 domain pairs
673 unique architectures

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Superfamily assignments

Domains

Proteins

Architectures

Families

SCOP link

Superfamilies

181 156 50 8 SCOP 52540 P-loop containing nucleoside triphosphate hydrolases
57 57 16 7 SCOP 51735 NAD(P)-binding Rossmann-fold domains
56 55 23 1 SCOP 46785 "Winged helix" DNA-binding domain
44 44 8 0 SCOP 47413 lambda repressor-like DNA-binding domains
39 37 5 1 SCOP 103473 MFS general substrate transporter
37 30 20 3 SCOP 50249 Nucleic acid-binding proteins
29 17 9 3 SCOP 53067 Actin-like ATPase domain
26 26 5 1 SCOP 161098 MetI-like
26 26 7 1 SCOP 53850 Periplasmic binding protein-like II
25 25 8 6 SCOP 53335 S-adenosyl-L-methionine-dependent methyltransferases
22 19 8 0 SCOP 46689 Homeodomain-like
22 20 4 1 SCOP 55729 Acyl-CoA N-acyltransferases (Nat)
19 19 7 3 SCOP 53098 Ribonuclease H-like
19 17 8 3 SCOP 51445 (Trans)glycosidases
19 19 3 1 SCOP 53822 Periplasmic binding protein-like I
18 18 4 4 SCOP 56784 HAD-like
17 17 13 3 SCOP 52374 Nucleotidylyl transferase
17 16 10 4 SCOP 54211 Ribosomal protein S5 domain 2-like
15 15 3 1 SCOP 53474 alpha/beta-Hydrolases
14 14 1 3 SCOP 53383 PLP-dependent transferases
14 14 12 2 SCOP 55681 Class II aaRS and biotin synthetases
14 7 5 0 SCOP 69360 Cell wall binding repeat
13 12 5 2 SCOP 53271 PRTase-like
12 12 3 1 SCOP 53448 Nucleotide-diphospho-sugar transferases
12 7 6 6 SCOP 52518 Thiamin diphosphate-binding fold (THDP-binding)
11 11 5 1 SCOP 51905 FAD/NAD(P)-binding domain
11 11 6 1 SCOP 55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
11 4 4 0 SCOP 54106 LysM domain
10 9 2 2 SCOP 52833 Thioredoxin-like
10 10 3 1 SCOP 50129 GroES-like
10 10 2 1 SCOP 53756 UDP-Glycosyltransferase/glycogen phosphorylase
10 10 6 1 SCOP 109604 HD-domain/PDEase-like
9 9 5 1 SCOP 52317 Class I glutamine amidotransferase-like
9 9 1 2 SCOP 53613 Ribokinase-like
9 8 4 2 SCOP 100950 NagB/RpiA/CoA transferase-like
9 8 8 2 SCOP 50447 Translation proteins
9 9 2 1 SCOP 52283 Formate/glycerate dehydrogenase catalytic domain-like
8 8 6 1 SCOP 55174 Alpha-L RNA-binding motif
8 8 4 1 SCOP 53187 Zn-dependent exopeptidases
8 8 6 1 SCOP 54001 Cysteine proteinases
8 8 2 1 SCOP 52172 CheY-like
8 5 3 2 SCOP 53901 Thiolase-like
8 8 2 2 SCOP 48179 6-phosphogluconate dehydrogenase C-terminal domain-like
8 8 1 1 SCOP 90123 ABC transporter transmembrane region
8 5 5 1 SCOP 54980 EF-G C-terminal domain-like
8 6 4 2 SCOP 52440 PreATP-grasp domain
8 8 3 3 SCOP 55347 Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
7 6 4 2 SCOP 56059 Glutathione synthetase ATP-binding domain-like
7 7 4 3 SCOP 55120 Pseudouridine synthase
7 7 3 0 SCOP 56300 Metallo-dependent phosphatases
7 7 4 1 SCOP 52402 Adenine nucleotide alpha hydrolases-like
7 7 4 0 SCOP 55811 Nudix
7 6 6 0 SCOP 55021 ACT-like
7 1 1 0 SCOP 82057 Prokaryotic SH3-related domain
7 7 5 1 SCOP 53623 MurD-like peptide ligases, catalytic domain
6 6 2 3 SCOP 51569 Aldolase
6 6 1 3 SCOP 51366 Ribulose-phoshate binding barrel
6 6 1 0 SCOP 52218 Flavoproteins
6 4 2 0 SCOP 47336 ACP-like
6 6 3 4 SCOP 75217 alpha/beta knot
6 6 3 2 SCOP 55486 Metalloproteases ("zincins"), catalytic domain
6 6 4 1 SCOP 51261 Duplicated hybrid motif
6 6 3 1 SCOP 56281 Metallo-hydrolase/oxidoreductase
6 6 1 1 SCOP 53254 Phosphoglycerate mutase-like
6 6 1 1 SCOP 51395 FMN-linked oxidoreductases
6 6 5 1 SCOP 56601 beta-lactamase/transpeptidase-like
6 6 1 0 SCOP 46894 C-terminal effector domain of the bipartite response regulators
6 5 5 1 SCOP 47781 RuvA domain 2-like
6 6 4 0 SCOP 53244 MurD-like peptide ligases, peptide-binding domain
6 6 3 1 SCOP 52794 PTS system IIB component-like
6 6 6 1 SCOP 47323 Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
6 2 2 0 SCOP 53738 Phosphoglucomutase, first 3 domains
5 5 4 2 SCOP 50104 Translation proteins SH3-like domain
5 5 2 0 SCOP 51695 PLC-like phosphodiesterases
5 5 2 2 SCOP 53720 ALDH-like
5 5 4 1 SCOP 51621 Phosphoenolpyruvate/pyruvate domain
5 4 2 0 SCOP 54637 Thioesterase/thiol ester dehydrase-isomerase
5 5 1 1 SCOP 51430 NAD(P)-linked oxidoreductase
5 5 4 2 SCOP 56672 DNA/RNA polymerases
5 5 3 3 SCOP 74650 Galactose mutarotase-like
5 5 2 1 SCOP 49899 Concanavalin A-like lectins/glucanases
5 4 3 0 SCOP 48295 TrpR-like
5 3 2 1 SCOP 63411 LuxS/MPP-like metallohydrolase
5 5 2 3 SCOP 75005 Arabinanase/levansucrase/invertase
5 5 1 1 SCOP 55424 FAD/NAD-linked reductases, dimerisation (C-terminal) domain
5 5 2 0 SCOP 47384 Homodimeric domain of signal transducing histidine kinase
5 5 1 0 SCOP 51011 Glycosyl hydrolase domain
5 5 1 1 SCOP 55060 GHMP Kinase, C-terminal domain
5 5 1 1 SCOP 55031 Bacterial exopeptidase dimerisation domain
4 4 4 3 SCOP 51556 Metallo-dependent hydrolases
4 4 2 3 SCOP 53927 Cytidine deaminase-like
4 4 3 2 SCOP 53697 SIS domain
4 4 4 0 SCOP 57716 Glucocorticoid receptor-like (DNA-binding domain)
4 4 3 2 SCOP 64182 DHH phosphoesterases
4 4 1 1 SCOP 51658 Xylose isomerase-like
4 4 2 2 SCOP 53633 Carbamate kinase-like
4 4 2 2 SCOP 51161 Trimeric LpxA-like enzymes
4 4 1 3 SCOP 52096 ClpP/crotonase
4 4 2 2 SCOP 56796 Dehydroquinate synthase-like
4 4 1 1 SCOP 53590 Nucleoside hydrolase
4 4 2 0 SCOP 52266 SGNH hydrolase
4 4 4 1 SCOP 54631 CBS-domain pair
4 4 2 0 SCOP 46955 Putative DNA-binding domain
4 4 2 1 SCOP 56349 DNA breaking-rejoining enzymes
4 4 3 3 SCOP 81301 Nucleotidyltransferase
4 4 3 2 SCOP 52467 DHS-like NAD/FAD-binding domain
4 3 3 0 SCOP 103481 Multidrug resistance efflux transporter EmrE
4 3 3 0 SCOP 88659 Sigma3 and sigma4 domains of RNA polymerase sigma factors
4 4 3 0 SCOP 55604 Glucose permease domain IIB
4 3 3 1 SCOP 54814 Prokaryotic type KH domain (KH-domain type II)
4 4 1 1 SCOP 64288 Chorismate lyase-like
4 4 1 0 SCOP 50331 MOP-like
4 2 2 1 SCOP 56024 Phospholipase D/nuclease
4 4 3 0 SCOP 46589 tRNA-binding arm
4 2 2 0 SCOP 63520 PTS-regulatory domain, PRD
4 4 2 1 SCOP 53223 Aminoacid dehydrogenase-like, N-terminal domain
4 4 2 1 SCOP 56719 Type II DNA topoisomerase
3 3 1 0 SCOP 57829 Zn-binding ribosomal proteins
3 3 1 1 SCOP 111331 NAD kinase/diacylglycerol kinase-like
3 3 2 1 SCOP 55920 Creatinase/aminopeptidase
3 2 2 0 SCOP 56214 4'-phosphopantetheinyl transferase
3 3 1 3 SCOP 53659 Isocitrate/Isopropylmalate dehydrogenase-like
3 3 1 1 SCOP 48557 L-aspartase-like
3 3 2 2 SCOP 48150 DNA-glycosylase
3 3 1 1 SCOP 51412 Inosine monophosphate dehydrogenase (IMPDH)
3 3 2 1 SCOP 51419 PLP-binding barrel
3 3 2 0 SCOP 55315 L30e-like
3 3 3 1 SCOP 50891 Cyclophilin-like
3 3 1 0 SCOP 48317 Acid phosphatase/Vanadium-dependent haloperoxidase
3 3 3 1 SCOP 54534 FKBP-like
3 3 3 3 SCOP 55931 Glutamine synthetase/guanido kinase
3 3 3 1 SCOP 52954 Class II aaRS ABD-related
3 3 2 2 SCOP 102405 MCP/YpsA-like
3 3 2 3 SCOP 51998 PFL-like glycyl radical enzymes
3 3 1 0 SCOP 54593 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
3 3 1 0 SCOP 53807 "Helical backbone" metal receptor
3 3 3 1 SCOP 88946 Sigma2 domain of RNA polymerase sigma factors
3 3 3 0 SCOP 89550 PHP domain-like
3 3 2 1 SCOP 53955 Lysozyme-like
3 3 2 0 SCOP 55826 YbaK/ProRS associated domain
3 3 3 0 SCOP 51338 Composite domain of metallo-dependent hydrolases
3 3 3 0 SCOP 55804 Phoshotransferase/anion transport protein
3 3 3 0 SCOP 50156 PDZ domain-like
3 1 1 0 SCOP 55979 DNA clamp
3 3 1 0 SCOP 51246 Rudiment single hybrid motif
3 3 3 2 SCOP 56176 FAD-binding/transporter-associated domain-like
3 3 1 0 SCOP 46973 Enzyme IIa from lactose specific PTS, IIa-lac
3 3 2 1 SCOP 48019 post-AAA+ oligomerization domain-like
3 1 1 1 SCOP 55973 S-adenosylmethionine synthetase
3 3 3 1 SCOP 81665 Calcium ATPase, transmembrane domain M
3 3 3 0 SCOP 116726 TrkA C-terminal domain-like
3 3 2 2 SCOP 50621 Alanine racemase C-terminal domain-like
3 2 2 1 SCOP 56042 PurM C-terminal domain-like
3 2 2 1 SCOP 55326 PurM N-terminal domain-like
3 3 2 0 SCOP 100879 Lesion bypass DNA polymerase (Y-family), little finger domain
3 3 3 1 SCOP 50677 ValRS/IleRS/LeuRS editing domain
3 3 3 1 SCOP 81271 TGS-like
3 3 3 0 SCOP 81653 Calcium ATPase, transduction domain A
3 3 1 0 SCOP 75445 D-ribose-5-phosphate isomerase (RpiA), lid domain
2 2 2 0 SCOP 48013 NusB-like
2 2 1 1 SCOP 81338 Aquaporin-like
2 2 1 1 SCOP 52141 Uracil-DNA glycosylase-like
2 2 1 1 SCOP 54197 HIT-like
2 2 1 1 SCOP 53137 Translational machinery components
2 2 1 0 SCOP 103491 Preprotein translocase SecY subunit
2 2 2 1 SCOP 46946 S13-like H2TH domain
2 2 1 0 SCOP 53597 Dihydrofolate reductase-like
2 2 1 0 SCOP 143800 L28p-like
2 2 1 1 SCOP 75620 Release factor
2 2 1 1 SCOP 82549 DAK1/DegV-like
2 2 1 1 SCOP 75625 YebC-like
2 2 2 1 SCOP 82649 SufE/NifU
2 2 2 1 SCOP 52980 Restriction endonuclease-like
2 2 2 0 SCOP 109998 Triger factor/SurA peptide-binding domain-like
2 2 2 1 SCOP 55068 Peptide methionine sulfoxide reductase
2 2 1 1 SCOP 51351 Triosephosphate isomerase (TIM)
2 2 1 2 SCOP 64484 beta and beta-prime subunits of DNA dependent RNA-polymerase
2 2 1 1 SCOP 55821 YrdC/RibB
2 2 2 1 SCOP 53686 Tryptophan synthase beta subunit-like PLP-dependent enzymes
2 1 1 0 SCOP 48452 TPR-like
2 2 1 1 SCOP 55205 EPT/RTPC-like
2 2 1 0 SCOP 81345 ABC transporter involved in vitamin B12 uptake, BtuC
2 2 1 1 SCOP 48576 Terpenoid synthases
2 2 2 1 SCOP 56235 N-terminal nucleophile aminohydrolases (Ntn hydrolases)
2 2 1 1 SCOP 56801 Acetyl-CoA synthetase-like
2 2 1 1 SCOP 55469 FMN-dependent nitroreductase-like
2 2 2 1 SCOP 53328 Formyltransferase
2 2 1 0 SCOP 53649 Alkaline phosphatase-like
2 2 1 0 SCOP 54427 NTF2-like
2 2 2 1 SCOP 49785 Galactose-binding domain-like
2 2 2 0 SCOP 57997 Tropomyosin
2 2 2 0 SCOP 51306 LexA/Signal peptidase
2 2 2 1 SCOP 51182 RmlC-like cupins
2 2 1 1 SCOP 53639 AraD/HMP-PK domain-like
2 2 2 1 SCOP 52972 ITPase-like
2 2 1 1 SCOP 48208 Six-hairpin glycosidases
2 2 2 1 SCOP 55781 GAF domain-like
2 2 1 0 SCOP 49777 PEBP-like
2 2 2 0 SCOP 52151 FabD/lysophospholipase-like
2 2 1 0 SCOP 101960 Stabilizer of iron transporter SufD
2 1 1 1 SCOP 49478 Cna protein B-type domain
2 2 2 1 SCOP 50494 Trypsin-like serine proteases
2 2 2 0 SCOP 57783 Zinc beta-ribbon
2 2 2 0 SCOP 82771 GIY-YIG endonuclease
2 2 2 0 SCOP 51230 Single hybrid motif
2 2 2 0 SCOP 46767 Methylated DNA-protein cysteine methyltransferase, C-terminal domain
2 2 2 0 SCOP 55797 PR-1-like
2 2 2 1 SCOP 81340 Clc chloride channel
2 1 1 1 SCOP 116734 DNA methylase specificity domain
2 2 1 0 SCOP 69047 Hypothetical protein YjbJ
2 2 2 0 SCOP 69065 RNase III domain-like
2 2 2 0 SCOP 88697 PUA domain-like
2 2 2 1 SCOP 89095 GatB/YqeY motif
2 2 1 1 SCOP 101307 YutG-like
2 2 1 0 SCOP 56747 Prim-pol domain
2 2 2 1 SCOP 52335 Methylglyoxal synthase-like
2 2 2 0 SCOP 53062 PTS system fructose IIA component-like
2 2 1 2 SCOP 51604 Enolase C-terminal domain-like
2 2 2 1 SCOP 55186 ThrRS/AlaRS common domain
2 1 1 0 SCOP 49401 Bacterial adhesins
2 2 1 0 SCOP 53092 Creatinase/prolidase N-terminal domain
2 2 2 1 SCOP 56712 Prokaryotic type I DNA topoisomerase
2 2 2 1 SCOP 51690 Nicotinate/Quinolinate PRTase C-terminal domain-like
2 2 2 1 SCOP 52728 PTS IIb component
2 1 1 0 SCOP 54403 Cystatin/monellin
2 2 2 1 SCOP 52922 TK C-terminal domain-like
2 2 1 0 SCOP 158560 BH3980-like
2 2 1 0 SCOP 55816 5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain
2 1 1 1 SCOP 53681 Aspartate/glutamate racemase
2 2 2 1 SCOP 48334 DNA repair protein MutS, domain III
2 2 1 1 SCOP 53671 Aspartate/ornithine carbamoyltransferase
2 2 2 0 SCOP 57884 Ada DNA repair protein, N-terminal domain (N-Ada 10)
2 2 1 1 SCOP 52021 Carbamoyl phosphate synthetase, small subunit N-terminal domain
2 2 1 1 SCOP 54826 Enolase N-terminal domain-like
2 2 1 1 SCOP 101904 GyrA/ParC C-terminal domain-like
2 2 2 0 SCOP 46600 C-terminal UvrC-binding domain of UvrB
2 2 1 0 SCOP 55252 C-terminal domain of arginine repressor
2 2 1 0 SCOP 51984 MurCD N-terminal domain
2 2 2 1 SCOP 54768 dsRNA-binding domain-like
2 1 1 1 SCOP 56053 Ribosomal protein L6
2 2 2 0 SCOP 55957 Phosphoglucomutase, C-terminal domain
2 2 1 0 SCOP 50615 N-terminal domain of alpha and beta subunits of F1 ATP synthase
2 2 2 0 SCOP 55048 Probable ACP-binding domain of malonyl-CoA ACP transacylase
2 2 2 0 SCOP 48108 Carbamoyl phosphate synthetase, large subunit connection domain
2 1 1 0 SCOP 49303 beta-Galactosidase/glucuronidase domain
2 1 1 0 SCOP 49493 HSP40/DnaJ peptide-binding domain
2 1 1 1 SCOP 54713 Elongation factor Ts (EF-Ts), dimerisation domain
2 2 1 1 SCOP 47917 C-terminal domain of alpha and beta subunits of F1 ATP synthase
2 2 1 1 SCOP 81886 Helical scaffold and wing domains of SecA
2 1 1 0 SCOP 54184 Penicillin-binding protein 2x (pbp-2x), c-terminal domain
2 2 1 1 SCOP 81767 Pre-protein crosslinking domain of SecA
2 2 2 0 SCOP 56519 Penicillin binding protein dimerisation domain
1 1 1 1 SCOP 56731 DNA primase core
1 1 1 1 SCOP 55594 HPr-like
1 1 1 1 SCOP 53167 Purine and uridine phosphorylases
1 1 1 0 SCOP 53790 Tetrapyrrole methylase
1 1 1 1 SCOP 74982 Small protein B (SmpB)
1 1 1 1 SCOP 56808 Ribosomal protein L1
1 1 1 1 SCOP 53178 Peptidyl-tRNA hydrolase-like
1 1 1 1 SCOP 47973 Ribosomal protein S7
1 1 1 0 SCOP 46911 Ribosomal protein S18
1 1 1 1 SCOP 75304 Amidase signature (AS) enzymes
1 1 1 1 SCOP 143597 YojJ-like
1 1 1 1 SCOP 56420 Peptide deformylase
1 1 1 0 SCOP 81606 PP2C-like
1 1 1 1 SCOP 56112 Protein kinase-like (PK-like)
1 1 1 0 SCOP 142433 CinA-like
1 1 1 1 SCOP 64376 YlxR-like
1 1 1 0 SCOP 89919 Ribosome-binding factor A, RbfA
1 1 1 1 SCOP 54999 Ribosomal protein S10
1 1 1 1 SCOP 52166 Ribosomal protein L4
1 1 1 0 SCOP 54189 Ribosomal proteins S24e, L23 and L15e
1 1 1 1 SCOP 54570 Ribosomal protein S19
1 1 1 1 SCOP 54843 Ribosomal protein L22
1 1 1 1 SCOP 54686 Ribosomal protein L16p/L10e
1 1 1 1 SCOP 50193 Ribosomal protein L14
1 1 1 1 SCOP 55282 RL5-like
1 1 1 1 SCOP 56047 Ribosomal protein S8
1 1 1 1 SCOP 52080 Ribosomal proteins L15p and L18e
1 1 1 0 SCOP 57840 Ribosomal protein L36
1 1 1 1 SCOP 64263 Prokaryotic ribosomal protein L17
1 1 1 0 SCOP 143034 L35p-like
1 1 1 1 SCOP 74731 Ribosomal protein L20
1 1 1 0 SCOP 69593 Glycerol-3-phosphate (1)-acyltransferase
1 1 1 0 SCOP 89447 AbrB/MazE/MraZ-like
1 1 1 1 SCOP 55831 Thymidylate synthase/dCMP hydroxymethylase
1 1 1 1 SCOP 47240 Ferritin-like
1 1 1 0 SCOP 141091 L21p-like
1 1 1 0 SCOP 110324 Ribosomal L27 protein-like
1 1 1 1 SCOP 53748 Phosphoglycerate kinase
1 1 1 1 SCOP 47729 IHF-like DNA-binding proteins
1 1 1 0 SCOP 160369 Ribosomal protein L10-like
1 1 1 0 SCOP 46992 Ribosomal protein S20
1 1 1 1 SCOP 52943 ATP synthase (F1-ATPase), gamma subunit
1 1 1 0 SCOP 81333 F1F0 ATP synthase subunit C
1 1 1 1 SCOP 109755 PhoU-like
1 1 1 1 SCOP 52161 Ribosomal protein L13
1 1 1 1 SCOP 47060 S15/NS1 RNA-binding domain
1 1 1 0 SCOP 82784 OsmC-like
1 1 1 1 SCOP 55194 Ribosome recycling factor, RRF
1 1 1 0 SCOP 54565 Ribosomal protein S16
1 1 1 1 SCOP 51316 Mss4-like
1 1 1 1 SCOP 51730 FAD-linked oxidoreductase
1 1 1 0 SCOP 52821 Rhodanese/Cell cycle control phosphatase
1 1 1 1 SCOP 103263 Chorismate synthase, AroC
1 1 1 0 SCOP 51283 dUTPase-like
1 1 1 1 SCOP 111337 QueA-like
1 1 1 1 SCOP 51713 tRNA-guanine transglycosylase
1 1 1 1 SCOP 52313 Ribosomal protein S2
1 1 1 1 SCOP 64005 Undecaprenyl diphosphate synthase
1 1 1 0 SCOP 102114 Radical SAM enzymes
1 1 1 0 SCOP 56655 Carbohydrate phosphatase
1 1 1 1 SCOP 102705 NIF3 (NGG1p interacting factor 3)-like
1 1 1 0 SCOP 55129 Ribosomal protein L30p/L7e
1 1 1 0 SCOP 46561 Ribosomal protein L29 (L29p)
1 1 1 0 SCOP 75169 DsrEFH-like
1 1 1 0 SCOP 54995 Ribosomal protein S6
1 1 1 1 SCOP 56104 SAICAR synthase-like
1 1 1 0 SCOP 89957 MTH1187/YkoF-like
1 1 1 0 SCOP 50475 FMN-binding split barrel
1 1 1 0 SCOP 48613 Heme oxygenase-like
1 1 1 1 SCOP 69500 DTD-like
1 1 1 0 SCOP 51726 UROD/MetE-like
1 1 1 0 SCOP 88723 PIN domain-like
1 1 1 1 SCOP 56322 ADC synthase
1 1 1 0 SCOP 55144 LigT-like
1 1 1 0 SCOP 54506 Diaminopimelate epimerase-like
1 1 1 1 SCOP 53774 Glutaminase/Asparaginase
1 1 1 1 SCOP 56752 D-aminoacid aminotransferase-like PLP-dependent enzymes
1 1 1 0 SCOP 56317 Carbon-nitrogen hydrolase
1 1 1 0 SCOP 47819 HRDC-like
1 1 1 1 SCOP 54919 Nucleoside diphosphate kinase, NDK
1 1 1 0 SCOP 110849 ParB/Sulfiredoxin
1 1 1 0 SCOP 111126 Ligand-binding domain in the NO signalling and Golgi transport
1 1 1 0 SCOP 82282 Homocysteine S-methyltransferase
1 1 1 0 SCOP 88713 Glycoside hydrolase/deacetylase
1 1 1 0 SCOP 55257 RBP11-like subunits of RNA polymerase
1 1 1 0 SCOP 56529 FAH
1 1 1 1 SCOP 64153 YjeF N-terminal domain-like
1 1 1 0 SCOP 55961 Bet v1-like
1 1 1 0 SCOP 58113 Apolipoprotein A-I
1 1 1 1 SCOP 52788 Phosphotyrosine protein phosphatases I
1 1 1 0 SCOP 63562 RPB6/omega subunit-like
1 1 1 0 SCOP 141734 HisI-like
1 1 1 0 SCOP 144091 Rhomboid-like
1 1 1 0 SCOP 101478 ADP-ribosylglycohydrolase
1 1 1 0 SCOP 51069 Carbonic anhydrase
1 1 1 1 SCOP 53795 PEP carboxykinase-like
1 1 1 0 SCOP 141571 Pentapeptide repeat-like
1 1 1 0 SCOP 102712 JAB1/MPN domain
1 1 1 1 SCOP 54909 Dimeric alpha+beta barrel
1 1 1 0 SCOP 47598 Ribbon-helix-helix
1 1 1 1 SCOP 52255 N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)
1 1 1 0 SCOP 143011 RelE-like
1 1 1 0 SCOP 52016 LeuD/IlvD-like
1 1 1 1 SCOP 111352 Ammonium transporter
1 1 1 0 SCOP 55331 Tautomerase/MIF
1 1 1 1 SCOP 56266 DmpA/ArgJ-like
1 1 1 0 SCOP 54523 Pili subunits
1 1 1 0 SCOP 82697 PurS-like
1 1 1 0 SCOP 117916 Fe-S cluster assembly (FSCA) domain-like
1 1 1 0 SCOP 81901 HCP-like
1 1 1 0 SCOP 55166 Hedgehog/DD-peptidase
1 1 1 0 SCOP 53300 vWA-like
1 1 1 1 SCOP 50118 Cell growth inhibitor/plasmid maintenance toxic component
1 1 1 0 SCOP 52507 Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
1 1 1 0 SCOP 51206 cAMP-binding domain-like
1 1 1 0 SCOP 161111 Cation efflux protein transmembrane domain-like
1 1 1 0 SCOP 54913 GlnB-like
1 1 1 0 SCOP 141000 Glu-tRNAGln amidotransferase C subunit
1 1 1 0 SCOP 116842 XseB-like
1 1 1 0 SCOP 53218 Molybdenum cofactor biosynthesis proteins
1 1 1 0 SCOP 54736 ClpS-like
1 1 1 1 SCOP 111304 Recombination protein RecR
1 1 1 0 SCOP 50800 PK beta-barrel domain-like
1 1 1 1 SCOP 117856 AF0104/ALDC/Ptd012-like
1 1 1 1 SCOP 53732 Aconitase iron-sulfur domain
1 1 1 0 SCOP 54518 Tubby C-terminal domain-like
1 1 1 1 SCOP 56219 DNase I-like
1 1 1 1 SCOP 55200 Translation initiation factor IF3, C-terminal domain
1 1 1 0 SCOP 54975 Acylphosphatase/BLUF domain-like
1 1 1 0 SCOP 103084 Holliday junction resolvase RusA
1 1 1 0 SCOP 102829 Cell division protein ZapA-like
1 1 1 1 SCOP 51391 Thiamin phosphate synthase
1 1 1 0 SCOP 51004 C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
1 1 1 0 SCOP 81330 Gated mechanosensitive channel
1 1 1 0 SCOP 48600 Chorismate mutase II
1 1 1 0 SCOP 101386 all-alpha NTP pyrophosphatases
1 1 1 0 SCOP 159234 FomD-like
1 1 1 1 SCOP 140478 LemA-like
1 1 1 0 SCOP 55785 PYP-like sensor domain (PAS domain)
1 1 1 0 SCOP 158622 YheA/YmcA-like
1 1 1 0 SCOP 50037 C-terminal domain of transcriptional repressors
1 1 1 0 SCOP 50814 Lipocalins
1 1 1 1 SCOP 75138 HprK N-terminal domain-like
1 1 1 1 SCOP 142338 CofD-like
1 1 1 0 SCOP 101473 DhaL-like
1 1 1 0 SCOP 53041 Resolvase-like
1 1 1 0 SCOP 50486 FMT C-terminal domain-like
1 1 1 0 SCOP 63817 Sortase
1 1 1 0 SCOP 52309 N-(deoxy)ribosyltransferase-like
1 1 1 0 SCOP 55846 N-acetylmuramoyl-L-alanine amidase-like
1 1 1 0 SCOP 75471 YhbY-like
1 1 1 0 SCOP 69754 Ribosome binding protein Y (YfiA homologue)
1 1 1 0 SCOP 140736 Rv1873-like
1 1 1 0 SCOP 110395 CutC-like
1 1 1 0 SCOP 142906 YjbR-like
1 1 1 0 SCOP 50974 Nitrous oxide reductase, N-terminal domain
1 1 1 1 SCOP 56091 DNA ligase/mRNA capping enzyme, catalytic domain
1 1 1 0 SCOP 109709 KorB DNA-binding domain-like
1 1 1 0 SCOP 158791 MgtE N-terminal domain-like
1 1 1 0 SCOP 102198 Putative cyclase
1 1 1 0 SCOP 46565 Chaperone J-domain
1 1 1 1 SCOP 102546 RbsD-like
1 1 1 0 SCOP 50346 PRC-barrel domain
1 1 1 1 SCOP 52490 Tubulin nucleotide-binding domain-like
1 1 1 0 SCOP 110455 Toprim domain
1 1 1 1 SCOP 52777 CoA-dependent acyltransferases
1 1 1 0 SCOP 56563 Major capsid protein gp5
1 1 1 1 SCOP 50465 EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
1 1 1 1 SCOP 69864 Argininosuccinate synthetase, C-terminal domain
1 1 1 0 SCOP 48024 N-terminal domain of DnaB helicase
1 1 1 0 SCOP 143865 CorA soluble domain-like
1 1 1 1 SCOP 158832 Tex N-terminal region-like
1 1 1 1 SCOP 48592 GroEL equatorial domain-like
1 1 1 1 SCOP 55103 FAD-linked oxidases, C-terminal domain
1 1 1 0 SCOP 81923 Double Clp-N motif
1 1 1 0 SCOP 55608 Homing endonucleases
1 1 1 0 SCOP 82114 Riboflavin kinase-like
1 1 1 0 SCOP 46906 Ribosomal protein L11, C-terminal domain
1 1 1 0 SCOP 160443 SMR domain-like
1 1 1 1 SCOP 102645 CoaB-like
1 1 1 0 SCOP 118352 HSP33 redox switch-like
1 1 1 1 SCOP 142913 YktB/PF0168-like
1 1 1 0 SCOP 55890 Sporulation response regulatory protein Spo0B
1 1 1 0 SCOP 103190 Sensory domain-like
1 1 1 0 SCOP 160515 YueI-like
1 1 1 1 SCOP 54821 Ribosomal protein S3 C-terminal domain
1 1 1 0 SCOP 52935 PK C-terminal domain-like
1 1 1 0 SCOP 52009 Phosphohistidine domain
1 1 1 0 SCOP 118116 DNA mismatch repair protein MutL
1 1 1 0 SCOP 158379 YqgQ-like
1 1 1 0 SCOP 158504 BH2638-like
1 1 1 0 SCOP 143567 YkuJ-like
1 1 1 0 SCOP 81336 F1F0 ATP synthase subunit A
1 1 1 0 SCOP 47789 C-terminal domain of RNA polymerase alpha subunit
1 1 1 0 SCOP 51344 Epsilon subunit of F1F0-ATP synthase N-terminal domain
1 1 1 1 SCOP 51971 Nucleotide-binding domain
1 1 1 0 SCOP 55658 L9 N-domain-like
1 1 1 0 SCOP 140652 YozE-like
1 1 1 0 SCOP 158472 HAMP domain-like
1 1 1 1 SCOP 82679 N-utilization substance G protein NusG, N-terminal domain
1 1 1 0 SCOP 55190 Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain
1 1 1 0 SCOP 158499 DnaD domain-like
1 1 1 1 SCOP 56037 PheT/TilS domain
1 1 1 0 SCOP 51215 Regulatory protein AraC
1 1 1 0 SCOP 58014 Coiled-coil domain of nucleotide exchange factor GrpE
1 1 1 0 SCOP 63999 Thiamin pyrophosphokinase, catalytic domain
1 1 1 1 SCOP 161093 MgtE membrane domain-like
1 1 1 1 SCOP 55307 Tubulin C-terminal domain-like
1 1 1 1 SCOP 140990 FtsH protease domain-like
1 1 1 0 SCOP 48163 An anticodon-binding domain of class I aminoacyl-tRNA synthetases
1 1 1 0 SCOP 101967 Adhesin YadA, collagen-binding domain
1 1 1 0 SCOP 54791 Eukaryotic type KH-domain (KH-domain type I)
1 1 1 1 SCOP 52029 GroEL apical domain-like
1 1 1 1 SCOP 81891 Poly A polymerase C-terminal region-like
1 1 1 0 SCOP 68912 Rho N-terminal domain-like
1 1 1 0 SCOP 57863 ArfGap/RecO-like zinc finger
1 1 1 0 SCOP 81660 Metal cation-transporting ATPase, ATP-binding domain N
1 1 1 0 SCOP 47364 Domain of the SRP/SRP receptor G-proteins
1 1 1 0 SCOP 48300 Ribosomal protein L7/12, oligomerisation (N-terminal) domain
1 1 1 0 SCOP 63737 Leukotriene A4 hydrolase N-terminal domain
1 1 1 1 SCOP 100920 Heat shock protein 70kD (HSP70), peptide-binding domain
1 1 1 0 SCOP 160964 MalF N-terminal region-like
1 1 1 0 SCOP 160800 Lp2179-like
1 1 1 0 SCOP 144083 Magnesium transport protein CorA, transmembrane region
1 1 1 0 SCOP 46934 UBA-like
1 1 1 0 SCOP 160240 Cation efflux protein cytoplasmic domain-like
1 1 1 1 SCOP 56327 LDH C-terminal domain-like
1 1 1 0 SCOP 46604 Epsilon subunit of F1F0-ATP synthase C-terminal domain
1 1 1 0 SCOP 63418 MurE/MurF N-terminal domain
1 1 1 0 SCOP 52113 BRCT domain
1 1 1 0 SCOP 141259 CarD-like
1 1 1 0 SCOP 53155 Methylated DNA-protein cysteine methyltransferase domain
1 1 1 0 SCOP 54373 FAD-linked reductases, C-terminal domain
1 1 1 0 SCOP 81761 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal domain
1 1 1 0 SCOP 50151 SacY-like RNA-binding domain
1 1 1 0 SCOP 47831 Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain
1 1 1 0 SCOP 74942 YhbC-like, C-terminal domain
1 1 1 0 SCOP 117892 Band 7/SPFH domain
1 1 1 0 SCOP 75420 YhbC-like, N-terminal domain
1 1 1 0 SCOP 81624 N-terminal domain of MutM-like DNA repair proteins
1 1 1 0 SCOP 54752 RecA protein, C-terminal domain
1 1 1 0 SCOP 100934 Heat shock protein 70kD (HSP70), C-terminal subdomain
1 1 1 0 SCOP 102735 Trigger factor ribosome-binding domain
1 1 1 1 SCOP 53743 FucI/AraA N-terminal and middle domains
1 1 1 0 SCOP 46557 GreA transcript cleavage protein, N-terminal domain
1 1 1 1 SCOP 54675 Nicotinate/Quinolinate PRTase N-terminal domain-like
1 1 1 1 SCOP 50443 FucI/AraA C-terminal domain-like
1 1 1 0 SCOP 47807 5' to 3' exonuclease, C-terminal subdomain
1 1 1 1 SCOP 47446 Signal peptide-binding domain
1 1 1 1 SCOP 56542 Substrate-binding domain of HMG-CoA reductase
1 1 1 1 SCOP 64397 Hsp33 domain
1 1 1 0 SCOP 54991 Anticodon-binding domain of PheRS
1 1 1 0 SCOP 141986 LD-carboxypeptidase A C-terminal domain-like
1 1 1 1 SCOP 55271 DNA repair protein MutS, domain I
1 1 1 0 SCOP 47928 N-terminal domain of the delta subunit of the F1F0-ATP synthase
1 1 1 1 SCOP 82051 Obg GTP-binding protein N-terminal domain
1 1 1 0 SCOP 143724 PHP14-like
1 1 1 0 SCOP 54368 Glutamine synthetase, N-terminal domain
1 1 1 0 SCOP 55261 GAD domain-like
1 1 1 1 SCOP 54747 Ribosomal L11/L12e N-terminal domain
1 1 1 1 SCOP 75553 Smc hinge domain
1 1 1 1 SCOP 48168 R1 subunit of ribonucleotide reductase, N-terminal domain
1 1 1 0 SCOP 54849 GroEL-intermediate domain like
1 1 1 1 SCOP 56194 Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain
1 1 1 0 SCOP 52156 Initiation factor IF2/eIF5b, domain 3
1 1 1 0 SCOP 51064 Head domain of nucleotide exchange factor GrpE
1 1 1 0 SCOP 47005 Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
1 1 1 0 SCOP 55653 Ribosomal protein L9 C-domain
1 1 1 0 SCOP 55035 NAD-binding domain of HMG-CoA reductase
1 1 1 0 SCOP 143517 TRCF domain-like
1 1 1 1 SCOP 101353 Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
1 1 1 1 SCOP 56553 Insert subdomain of RNA polymerase alpha subunit
1 1 1 0 SCOP 46929 DNA helicase RuvA subunit, C-terminal domain
1 1 1 0 SCOP 101821 Aminopeptidase/glucanase lid domain
1 1 1 0 SCOP 54364 Translation initiation factor IF3, N-terminal domain
1 1 1 1 SCOP 69705 Transcription factor NusA, N-terminal domain
1 1 1 0 SCOP 53150 DNA repair protein MutS, domain II
1 1 1 0 SCOP 140356 PPK N-terminal domain-like
1 1 1 0 SCOP 81799 Putative methyltransferase TM0872, insert domain
1 1 1 0 SCOP 102741 Obg GTP-binding protein C-terminal domain

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The following superfamilies have one or more weak hits:

SCOP superfamily Myosin rod fragments
SCOP superfamily Subunits of heterodimeric actin filament capping protein Capz
SCOP superfamily Hypothetical protein VC0424
SCOP superfamily Prokaryotic lipoproteins and lipoprotein localization factors
SCOP superfamily HesB-like domain
SCOP superfamily Multidrug efflux transporter AcrB transmembrane domain
SCOP superfamily MesJ substrate recognition domain-like
SCOP superfamily Probable GTPase Der, C-terminal domain
SCOP superfamily beta-sandwich domain of Sec23/24
SCOP superfamily beta-catenin-interacting protein ICAT
SCOP superfamily F1F0 ATP synthase subunit B, membrane domain
SCOP superfamily ISP transmembrane anchor
SCOP superfamily Cytochrome c oxidase subunit II-like, transmembrane region
SCOP superfamily Cytochrome c oxidase subunit I-like
SCOP superfamily Mitochondrial cytochrome c oxidase subunit IV
SCOP superfamily Family A G protein-coupled receptor-like
SCOP superfamily C-terminal domain of PLC-beta
SCOP superfamily Phage tail proteins
SCOP superfamily SAP domain
SCOP superfamily Thiamin pyrophosphokinase, substrate-binding domain
SCOP superfamily BAG domain
SCOP superfamily Methyl-accepting chemotaxis protein (MCP) signaling domain
SCOP superfamily Bacterial hemolysins
SCOP superfamily Outer membrane lipoprotein
SCOP superfamily Fibrinogen C-terminal domain-like
SCOP superfamily ADP-ribosylation
SCOP superfamily Hect, E3 ligase catalytic domain
SCOP superfamily Nucleotide cyclase
SCOP superfamily SecB-like
SCOP superfamily Uracil-DNA glycosylase inhibitor protein
SCOP superfamily Ferredoxin reductase-like, C-terminal NADP-linked domain
SCOP superfamily L domain-like
SCOP superfamily Pectin lyase-like
SCOP superfamily Mannose-binding lectins
SCOP superfamily Actin-crosslinking proteins
SCOP superfamily SH3-domain
SCOP superfamily Multiheme cytochromes
SCOP superfamily Tetracyclin repressor-like, C-terminal domain
SCOP superfamily Lipoxigenase
SCOP superfamily Ankyrin repeat
SCOP superfamily ARM repeat
SCOP superfamily GntR ligand-binding domain-like
SCOP superfamily ERP29 C domain-like
SCOP superfamily Ypt/Rab-GAP domain of gyp1p
SCOP superfamily t-snare proteins
SCOP superfamily EF-hand
SCOP superfamily SinR repressor dimerisation domain-like
SCOP superfamily TMV-like viral coat proteins
SCOP superfamily Spectrin repeat
SCOP superfamily Prefoldin
SCOP superfamily PspA lactotransferrin-binding region
SCOP superfamily AF1531-like
SCOP superfamily PH0156-like
SCOP superfamily YdhG-like
SCOP superfamily FLJ32549 domain-like
SCOP superfamily HP0062-like
SCOP superfamily DUSP-like
SCOP superfamily Nqo1 middle domain-like
SCOP superfamily EndoU-like
SCOP superfamily EAL domain-like
SCOP superfamily Fic-like
SCOP superfamily SipA N-terminal domain-like
SCOP superfamily BAS1536-like
SCOP superfamily Proton glutamate symport protein
SCOP superfamily Geminin coiled-coil domain
SCOP superfamily OmpH-like
SCOP superfamily HlyD-like secretion proteins
SCOP superfamily VPS9 domain
SCOP superfamily DinB/YfiT-like putative metalloenzymes
SCOP superfamily Bacteriocin immunity protein-like
SCOP superfamily BAR/IMD domain-like
SCOP superfamily SBT domain
SCOP superfamily Mitochondrial carrier
SCOP superfamily Oligosaccharyltransferase subunit ost4p
SCOP superfamily 2-methylcitrate dehydratase PrpD
SCOP superfamily Hypothetical protein c14orf129, hspc210
SCOP superfamily Nucleocapsid protein dimerization domain
SCOP superfamily NHL repeat
SCOP superfamily Mob1/phocein

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